View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1107_high_102 (Length: 218)
Name: NF1107_high_102
Description: NF1107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1107_high_102 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 43768018 - 43768206
Alignment:
| Q |
15 |
cataggtagaggaaattctaagatgtggacatattgcacagttttcgaa-tgataaatactgtggaggcacagagcatatactacttaacttggacatga |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43768018 |
cataggtagaggaaattctaagatgtggacatattgcacagttttccaaatgataaatactgtggaggcacagagcatatactacttaacttggacatga |
43768117 |
T |
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| Q |
114 |
aatcaatcataaaactctaaccttaattttgcatttggcacgtacagatgtttgctgagttgcaaatgttaacaccaatggttccaact |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43768118 |
aatcaatcataaaactctaaccttaattttgcatttggtacgtacagatgtttgctgagttgcaaatgttaacaccaatggttccaact |
43768206 |
T |
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