View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1107_low_110 (Length: 268)

Name: NF1107_low_110
Description: NF1107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1107_low_110
NF1107_low_110
[»] chr3 (24 HSPs)
chr3 (57-264)||(30766341-30766547)
chr3 (54-190)||(6093217-6093352)
chr3 (54-161)||(37611459-37611566)
chr3 (54-161)||(188606-188713)
chr3 (54-148)||(23937295-23937389)
chr3 (119-191)||(918794-918866)
chr3 (145-265)||(22759056-22759174)
chr3 (119-190)||(44072781-44072852)
chr3 (172-267)||(16496326-16496421)
chr3 (223-266)||(19353795-19353838)
chr3 (218-264)||(188731-188777)
chr3 (132-189)||(44186933-44186990)
chr3 (223-267)||(52852741-52852785)
chr3 (223-266)||(8396766-8396809)
chr3 (223-266)||(22477906-22477949)
chr3 (223-265)||(4137399-4137441)
chr3 (223-265)||(6103432-6103474)
chr3 (223-265)||(18688674-18688716)
chr3 (223-265)||(35861002-35861044)
chr3 (223-265)||(52462214-52462256)
chr3 (223-265)||(55290396-55290438)
chr3 (225-266)||(5240990-5241031)
chr3 (218-266)||(15315271-15315320)
chr3 (223-264)||(18741517-18741558)
[»] chr5 (25 HSPs)
chr5 (57-265)||(2366839-2367046)
chr5 (54-161)||(22602699-22602806)
chr5 (54-161)||(36366189-36366296)
chr5 (57-265)||(38041490-38041686)
chr5 (152-267)||(32977099-32977213)
chr5 (146-262)||(19365869-19365984)
chr5 (141-200)||(18037294-18037353)
chr5 (119-198)||(37464476-37464555)
chr5 (218-266)||(36366123-36366171)
chr5 (218-265)||(7863528-7863575)
chr5 (169-265)||(9702656-9702751)
chr5 (218-265)||(22602634-22602681)
chr5 (218-264)||(42819330-42819376)
chr5 (144-201)||(39169409-39169466)
chr5 (223-264)||(41693142-41693183)
chr5 (218-265)||(9809820-9809867)
chr5 (218-249)||(12763092-12763123)
chr5 (218-264)||(12702061-12702107)
chr5 (223-265)||(34719458-34719500)
chr5 (223-264)||(3086433-3086474)
chr5 (223-264)||(25695539-25695580)
chr5 (223-267)||(4883071-4883115)
chr5 (223-267)||(13596919-13596963)
chr5 (222-265)||(18037229-18037273)
chr5 (223-267)||(20350825-20350869)
[»] chr4 (31 HSPs)
chr4 (54-264)||(56541597-56541807)
chr4 (54-161)||(33486445-33486552)
chr4 (54-161)||(43014655-43014762)
chr4 (59-148)||(16895840-16895929)
chr4 (150-266)||(19591008-19591124)
chr4 (119-208)||(43332507-43332596)
chr4 (119-208)||(51452574-51452663)
chr4 (119-207)||(26924320-26924408)
chr4 (119-198)||(10259390-10259469)
chr4 (119-198)||(24077459-24077538)
chr4 (117-203)||(28120245-28120331)
chr4 (146-206)||(1975318-1975378)
chr4 (143-203)||(49711684-49711744)
chr4 (144-265)||(23992319-23992439)
chr4 (119-198)||(21564986-21565065)
chr4 (218-265)||(15650485-15650532)
chr4 (223-265)||(28134707-28134749)
chr4 (218-264)||(43014591-43014637)
chr4 (223-264)||(8532224-8532265)
chr4 (223-266)||(35707656-35707699)
chr4 (223-265)||(2118191-2118233)
chr4 (218-264)||(3839095-3839141)
chr4 (223-265)||(5759342-5759384)
chr4 (218-248)||(16895945-16895975)
chr4 (223-265)||(36858002-36858044)
chr4 (223-264)||(574177-574218)
chr4 (223-264)||(3759280-3759321)
chr4 (223-264)||(12680630-12680671)
chr4 (223-264)||(39713496-39713537)
chr4 (218-266)||(29706148-29706196)
chr4 (108-148)||(29706233-29706273)
[»] chr8 (20 HSPs)
chr8 (54-265)||(12660957-12661167)
chr8 (54-161)||(11696979-11697086)
chr8 (54-203)||(4634847-4634992)
chr8 (146-265)||(27272610-27272728)
chr8 (119-208)||(20662974-20663063)
chr8 (119-208)||(44213091-44213180)
chr8 (119-208)||(30548337-30548426)
chr8 (169-266)||(12249910-12250006)
chr8 (169-266)||(23626054-23626150)
chr8 (169-266)||(39445201-39445297)
chr8 (218-265)||(2961008-2961055)
chr8 (223-266)||(5836240-5836283)
chr8 (223-266)||(41978859-41978902)
chr8 (218-264)||(11697105-11697151)
chr8 (223-265)||(18375557-18375599)
chr8 (223-265)||(36778480-36778522)
chr8 (223-265)||(41158644-41158686)
chr8 (223-264)||(40586443-40586484)
chr8 (225-265)||(7391324-7391364)
chr8 (220-248)||(21543231-21543259)
[»] chr6 (26 HSPs)
chr6 (67-265)||(2624721-2624919)
chr6 (54-262)||(22975720-22975927)
chr6 (54-262)||(23812474-23812681)
chr6 (57-265)||(33300501-33300710)
chr6 (63-161)||(11470837-11470935)
chr6 (119-264)||(33979081-33979226)
chr6 (63-147)||(18389232-18389316)
chr6 (119-208)||(250020-250109)
chr6 (119-208)||(12579833-12579922)
chr6 (86-161)||(11272664-11272739)
chr6 (218-266)||(18389166-18389214)
chr6 (218-266)||(33319044-33319092)
chr6 (223-266)||(35160123-35160166)
chr6 (223-267)||(1072580-1072624)
chr6 (141-193)||(3052076-3052128)
chr6 (169-266)||(4425855-4425951)
chr6 (218-265)||(1932335-1932382)
chr6 (223-266)||(6966235-6966278)
chr6 (218-249)||(8615078-8615109)
chr6 (218-265)||(11272757-11272804)
chr6 (223-266)||(22373138-22373181)
chr6 (223-266)||(24447795-24447838)
chr6 (227-265)||(9978707-9978745)
chr6 (223-265)||(15276543-15276585)
chr6 (223-264)||(4110061-4110102)
chr6 (218-266)||(5753125-5753173)
[»] scaffold0103 (1 HSPs)
scaffold0103 (54-266)||(12851-13066)
[»] chr7 (27 HSPs)
chr7 (54-161)||(27840384-27840491)
chr7 (54-159)||(12960477-12960582)
chr7 (57-147)||(42298912-42299002)
chr7 (119-208)||(19033702-19033791)
chr7 (119-208)||(20720845-20720934)
chr7 (119-208)||(20765507-20765596)
chr7 (119-208)||(29491085-29491174)
chr7 (84-264)||(23476587-23476755)
chr7 (119-208)||(34282150-34282239)
chr7 (143-203)||(8998425-8998485)
chr7 (145-203)||(45121953-45122011)
chr7 (169-266)||(9226019-9226115)
chr7 (134-190)||(33230026-33230082)
chr7 (218-265)||(12960602-12960649)
chr7 (169-265)||(38434277-38434372)
chr7 (223-267)||(691289-691333)
chr7 (223-267)||(21669229-21669273)
chr7 (169-266)||(42996888-42996984)
chr7 (218-265)||(27840509-27840556)
chr7 (223-266)||(39278238-39278281)
chr7 (220-266)||(2067847-2067893)
chr7 (223-265)||(31896813-31896855)
chr7 (223-265)||(39647981-39648023)
chr7 (230-267)||(272588-272625)
chr7 (225-266)||(17817721-17817762)
chr7 (223-264)||(23762347-23762388)
chr7 (145-186)||(42298885-42298926)
[»] chr1 (17 HSPs)
chr1 (57-266)||(34265874-34266084)
chr1 (61-161)||(20767433-20767533)
chr1 (54-161)||(26429187-26429294)
chr1 (54-161)||(3929812-3929920)
chr1 (57-266)||(23909714-23909911)
chr1 (169-266)||(28565428-28565524)
chr1 (169-266)||(28631758-28631854)
chr1 (172-267)||(13662116-13662211)
chr1 (220-266)||(3929746-3929792)
chr1 (142-209)||(1954395-1954462)
chr1 (223-266)||(4893968-4894011)
chr1 (223-266)||(10763588-10763631)
chr1 (223-266)||(42682592-42682635)
chr1 (223-265)||(29840689-29840731)
chr1 (223-265)||(38896815-38896857)
chr1 (220-265)||(20767553-20767598)
chr1 (224-265)||(47137860-47137901)
[»] chr2 (18 HSPs)
chr2 (57-266)||(1691425-1691622)
chr2 (63-147)||(7364673-7364757)
chr2 (73-189)||(32726064-32726180)
chr2 (126-201)||(24278957-24279032)
chr2 (146-208)||(7984041-7984103)
chr2 (119-208)||(11866273-11866362)
chr2 (134-208)||(3711069-3711143)
chr2 (119-193)||(35357681-35357755)
chr2 (224-264)||(10820973-10821013)
chr2 (218-267)||(7364775-7364824)
chr2 (144-209)||(7768736-7768800)
chr2 (44-81)||(25124142-25124179)
chr2 (223-265)||(4289027-4289069)
chr2 (84-129)||(7984108-7984153)
chr2 (223-264)||(18137901-18137942)
chr2 (230-266)||(15084296-15084332)
chr2 (223-267)||(26828460-26828504)
chr2 (218-266)||(30922096-30922144)
[»] scaffold0004 (1 HSPs)
scaffold0004 (146-206)||(81010-81070)
[»] scaffold0499 (1 HSPs)
scaffold0499 (145-203)||(10706-10764)
[»] scaffold0073 (1 HSPs)
scaffold0073 (143-203)||(33448-33508)
[»] scaffold0440 (1 HSPs)
scaffold0440 (142-249)||(8329-8435)
[»] scaffold0249 (1 HSPs)
scaffold0249 (218-267)||(24916-24965)
[»] scaffold0088 (1 HSPs)
scaffold0088 (169-266)||(52691-52787)
[»] scaffold0006 (1 HSPs)
scaffold0006 (172-267)||(151878-151973)
[»] scaffold0051 (2 HSPs)
scaffold0051 (169-264)||(61660-61754)
scaffold0051 (223-267)||(55560-55604)
[»] scaffold0069 (1 HSPs)
scaffold0069 (223-266)||(14648-14691)
[»] scaffold0057 (1 HSPs)
scaffold0057 (223-265)||(17400-17442)
[»] scaffold0045 (1 HSPs)
scaffold0045 (223-265)||(12213-12255)
[»] scaffold0110 (1 HSPs)
scaffold0110 (223-264)||(48526-48567)


Alignment Details
Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 57 - 264
Target Start/End: Original strand, 30766341 - 30766547
Alignment:
Q  57 atcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaata 156  Q
    ||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  30766341 atcttaattattatgttgtttgcctgatctcatgaacaaaatatatgctcttttcatcaatcaagacttggtaaggctttggtaaatattttgataaata 30766440  T
Q  157 tttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttg 256  Q
    |||||||||||  || ||||||| ||||||| || || ||||||||| || ||        |||||||||||||||||||||||||||||||||  ||||    
T  30766441 tttctaatgtttatgtaatattccttaatttacttatttttcctttggaacaa-ttgttttacaagatacgttattcaacccgtgcgaagcacaggtttg 30766539  T
Q  257 taactagt 264  Q
    ||||||||    
T  30766540 taactagt 30766547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 6093352 - 6093217
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||| |   ||||||||||||||||||| ||  |||||| ||||||||||| |||    
T  6093352 ttcatcttaattattatgatgttt-cctggtctcatgaacaaaatgtatccatatttcatgaatcaagacttgatagagctttcataaatattttggtaa 6093254  T
Q  154 atatttctaatgttggtgcaatattctttaatttgct 190  Q
    | |||||||||||| ||||||||| | ||||||||||    
T  6093253 aaatttctaatgtttgtgcaatatccattaatttgct 6093217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 37611566 - 37611459
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  37611566 ttcaacttaattatgatcatgttttcctgatttcatgaacatagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttgataa 37611467  T
Q  154 atatttct 161  Q
    ||||||||    
T  37611466 atatttct 37611459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 188606 - 188713
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||   ||||| ||||||||||| |||    
T  188606 ttcaacttaattatgatcatgttttcctggtttcatgaacaaagtatatcatcttttcatgaatcaagacttggtagaactttcataaatattttggtaa 188705  T
Q  154 atatttct 161  Q
    ||||||||    
T  188706 atatttct 188713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 23937295 - 23937389
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatatttt 148  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |||||   |||||||||||||||||||| |||  |||||| ||||||||||    
T  23937295 ttcatcttaattattattatgtttttctggtctcatgaacaaaatatatctccttttcatgaatcaagacttagtagagctttcataaatatttt 23937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 918794 - 918866
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctc 191  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| |||||||||||    
T  918794 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctc 918866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 22759174 - 22759056
Alignment:
Q  145 ttttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcga 244  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| || |||||||||||| ||        |||| ||| ||| ||||||||||||||    
T  22759174 ttttgataaatatttctaatgtttgtgcaatattccttaatttgct-atttttcctttgaaacaa-tttttttacaaaatatgttcttcaacccgtgcga 22759077  T
Q  245 agcacaaatttgtaactagtt 265  Q
    |||||   |||||||||||||    
T  22759076 agcacgggtttgtaactagtt 22759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 44072852 - 44072781
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgct 190  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  44072852 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgct 44072781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 16496326 - 16496421
Alignment:
Q  172 caatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||| |||||||| |||| ||||||||| |||||        |||||||| |||||||||||||||||||||||   |||||||||| ||||    
T  16496326 caatattcattaatttgatcatttttcctttggaataattttttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactaatttg 16496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 19353795 - 19353838
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||| ||||||||||||||||| |||||||||||||||    
T  19353795 atacgttattgaacccgtgcgaagcacagatttgtaactagttt 19353838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 188731 - 188777
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||    
T  188731 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagt 188777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 44186990 - 44186933
Alignment:
Q  132 gctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgc 189  Q
    ||||| |||||||||||| |||| |||||||||||| ||||||||| | |||||||||    
T  44186990 gctttggtaaatattttggtaaaaatttctaatgtttgtgcaatatccattaatttgc 44186933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 52852785 - 52852741
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||||| |||||||||||||||| | |||||||||||||||    
T  52852785 atacgttattgaacccgtgcgaagcacgagtttgtaactagtttg 52852741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 8396766 - 8396809
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  8396766 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 8396809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 22477906 - 22477949
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  22477906 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 22477949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 4137441 - 4137399
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  4137441 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 4137399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 6103474 - 6103432
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||| |||||||||||||||||  |||||||||||||    
T  6103474 atacgttattgaacccgtgcgaagcacaggtttgtaactagtt 6103432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 18688674 - 18688716
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  18688674 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 18688716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 35861002 - 35861044
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  35861002 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 35861044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 52462256 - 52462214
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||| ||||||||||||||||  ||||||||||||||    
T  52462256 atacgttattgaacccgtgcgaagcacggatttgtaactagtt 52462214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 55290438 - 55290396
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||| |||||||||  |||||||||||||    
T  55290438 atacgttattcaacccgtacgaagcacaggtttgtaactagtt 55290396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 5240990 - 5241031
Alignment:
Q  225 acgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||   ||||||||||||||    
T  5240990 acgttattcaacccgtgcgaagcacgggtttgtaactagttt 5241031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 15315320 - 15315271
Alignment:
Q  218 acaagatacgttattcaacccgtgcg-aagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||| ||||||   ||||||||||||||    
T  15315320 acaagatacgttattcaacccgtgcgaaagcacgggtttgtaactagttt 15315271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 18741558 - 18741517
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||| ||||||||||||| ||| |||||||||||||    
T  18741558 atacgttattgaacccgtgcgaagtacagatttgtaactagt 18741517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 265
Target Start/End: Complemental strand, 2367046 - 2366839
Alignment:
Q  57 atcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaata 156  Q
    |||||||  |||||| |||||||||  | ||||||||||| |||||||||||||||||||||||||| || |||||||||  |||||||||||||||||     
T  2367046 atcttaacaattatgttgttttccttatttcatgaacaaaatatatgctcttttcatgaatcaagacctgataaggctttgttaaatattttgataaatc 2366947  T
Q  157 tttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttg 256  Q
    |||||||| || ||||||||||| ||||||||||||| ||||||||  |||||        |||||||||||||||||||||||||||| ||||  ||||    
T  2366946 tttctaatatttgtgcaatattccttaatttgctcatttttcctttagaataa-tttttttacaagatacgttattcaacccgtgcgaaacacaggtttg 2366848  T
Q  257 taactagtt 265  Q
    |||||||||    
T  2366847 taactagtt 2366839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 22602806 - 22602699
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||| |||    
T  22602806 ttcaacttaattatgatcatgtttttctggtttcatgaacaaagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttggtaa 22602707  T
Q  154 atatttct 161  Q
    ||||||||    
T  22602706 atatttct 22602699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 36366296 - 36366189
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||||||| | ||| ||||||||||||| || |||||||||||||||||||||||| |||||| ||||||||||| |||    
T  36366296 ttcaacttaattatgatcatgttttcctgatttcaggaacaaagtatatcctattttcatgaatcaagacttggtaaagctttcataaatattttggtaa 36366197  T
Q  154 atatttct 161  Q
    ||||||||    
T  36366196 atatttct 36366189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 265
Target Start/End: Complemental strand, 38041686 - 38041490
Alignment:
Q  57 atcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaata 156  Q
    ||||||||||||||| |||||||    |||| |||||||| ||||||||||||| ||||||||||||  ||||| |||||            ||||||||    
T  38041686 atcttaattattatgttgttttctcaatctcgtgaacaaaatatatgctctttttatgaatcaagacccggtaaagcttt------------gataaata 38041599  T
Q  157 tttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttg 256  Q
    |||||||| || ||||||||||| ||||||||||||| ||| |||||||| ||        |||| ||| ||| |||||||||||||||||||   ||||    
T  38041598 tttctaatatttgtgcaatattccttaatttgctcattttttctttgaaacaactttttttacaaaatatgttcttcaacccgtgcgaagcacgggtttg 38041499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 267
Target Start/End: Complemental strand, 32977213 - 32977099
Alignment:
Q  152 aaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaa 251  Q
    |||||||||||||||| ||||||||||  ||||||| ||||| ||| |||||||| ||        ||||||||||||||||||||||||||||||||      
T  32977213 aaatatttctaatgtttgtgcaatatttcttaatttactcattttttctttgaaacaattttttt-acaagatacgttattcaacccgtgcgaagcaccg 32977115  T
Q  252 atttgtaactagtttg 267  Q
     |||||||||||||||    
T  32977114 gtttgtaactagtttg 32977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 19365869 - 19365984
Alignment:
Q  146 tttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaa 245  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||||||| ||| |||| |||  |        ||||||||||||||||||||| ||||||    
T  19365869 tttgataaatatttataatgtttgtgcaatattccttaatttgctcattttttcttt-aaaacattttttttacaagatacgttattcaacccatgcgaa 19365967  T
Q  246 gcacaaatttgtaacta 262  Q
    ||||   ||||||||||    
T  19365968 gcacgggtttgtaacta 19365984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 18037353 - 18037294
Alignment:
Q  141 aatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcct 200  Q
    |||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| ||||||    
T  18037353 aatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcct 18037294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 37464476 - 37464555
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttc 198  Q
    |||||||| ||| | |||| |||||||||||||||| |||| |||| || ||||||||||| ||||||||||||| ||||    
T  37464476 aagacttgataaagttttcataaatattttgataaagatttataatttttgtgcaatattcattaatttgctcatttttc 37464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 36366171 - 36366123
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||    
T  36366171 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 36366123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 7863575 - 7863528
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||    
T  7863575 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 7863528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 9702656 - 9702751
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||||||||||||||||   |||||||||||||    
T  9702656 gtgcaatattcattaatttgctcatttttcctttggaacaaatttttt-acaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 9702751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 22602681 - 22602634
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||    
T  22602681 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 22602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 42819376 - 42819330
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||    
T  42819376 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagt 42819330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 39169466 - 39169409
Alignment:
Q  144 attttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctt 201  Q
    |||||||||||||||| ||||||| |||||||||||  |||||| ||||| |||||||    
T  39169466 attttgataaatatttataatgtttgtgcaatattcagtaattttctcatttttcctt 39169409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 41693142 - 41693183
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  41693142 atacgttattcaacccgtgcgaagcacgagtttgtaactagt 41693183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 9809867 - 9809820
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||| ||||||||||||||||||||||   |||||||||||||    
T  9809867 acaagatacattattcaacccgtgcgaagcacgggtttgtaactagtt 9809820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 249
Target Start/End: Complemental strand, 12763123 - 12763092
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcac 249  Q
    ||||||||||||||||||||||||||||||||    
T  12763123 acaagatacgttattcaacccgtgcgaagcac 12763092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 12702107 - 12702061
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||    
T  12702107 acaagatacattattcaacccgtgcgaagcacgggtttgtaactagt 12702061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 34719458 - 34719500
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  34719458 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 34719500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 3086474 - 3086433
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  3086474 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 3086433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 25695580 - 25695539
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  25695580 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 25695539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 4883071 - 4883115
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||||| ||||||||||||||||   |||||||||||||||    
T  4883071 atacgttattgaacccgtgcgaagcacgggtttgtaactagtttg 4883115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 13596919 - 13596963
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||| ||||||||||||||||||||   |||||||||||||||    
T  13596919 atacgtaattcaacccgtgcgaagcacgggtttgtaactagtttg 13596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 18037273 - 18037229
Alignment:
Q  222 gatacgttat-tcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||| |||||||||||||||||| | |||||||||||||    
T  18037273 gatacgttatctcaacccgtgcgaagcacgagtttgtaactagtt 18037229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 20350825 - 20350869
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||||| ||||||||||||||||   |||||||||||||||    
T  20350825 atacgttattgaacccgtgcgaagcacgggtttgtaactagtttg 20350869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 264
Target Start/End: Original strand, 56541597 - 56541807
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatg--ctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgat 151  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   | |||||||||| |||||| ||||||| ||||| ||||||  |||||    
T  56541597 ttcatcttaattattatgatgttttcctggtctcatgaacaaaatatatgtttttttttcatgaaacaagacctggtaagactttcataaata-attgat 56541695  T
Q  152 aaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaa 251  Q
    |||||||||||||||| ||||||  ||  |||||||||| || |||||||||||||||        || ||||||||||||||||||||||||||||||     
T  56541696 aaatatttctaatgtttgtgcaacttttcttaatttgcttatttttcctttgaaataa-tttttttacgagatacgttattcaacccgtgcgaagcacag 56541794  T
Q  252 atttgtaactagt 264  Q
     ||||||||||||    
T  56541795 gtttgtaactagt 56541807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 33486552 - 33486445
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||| |||    
T  33486552 ttcaacttaattatgatcatgtttttctggtttcatgaacaaagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttggtaa 33486453  T
Q  154 atatttct 161  Q
    ||||||||    
T  33486452 atatttct 33486445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 43014762 - 43014655
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||| |||    
T  43014762 ttcaacttaattatgatcatgtttttctggtttcatgaacaaagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttggtaa 43014663  T
Q  154 atatttct 161  Q
    ||||||||    
T  43014662 atatttct 43014655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 16895840 - 16895929
Alignment:
Q  59 cttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatatttt 148  Q
    |||||||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||  |||||| ||||||||||    
T  16895840 cttaattattatcatgttttcctggtttcatgaacaaggtatatcctcttttcatgaatcaagacttggtagagctttcataaatatttt 16895929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 266
Target Start/End: Original strand, 19591008 - 19591124
Alignment:
Q  150 ataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcac 249  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||         ||||||||||||||| ||||||||||||||||    
T  19591008 ataaatatttataatgtttgtgcaatattcattaatttgctcatttttcctttgaaatatttttttttacaagatacgttattaaacccgtgcgaagcac 19591107  T
Q  250 aaatttgtaactagttt 266  Q
       ||||||||||||||    
T  19591108 gggtttgtaactagttt 19591124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 43332507 - 43332596
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  43332507 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 43332596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 51452574 - 51452663
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  51452574 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 51452663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 26924408 - 26924320
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaat 207  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| ||||    
T  26924408 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaat 26924320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 10259469 - 10259390
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttc 198  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| ||||    
T  10259469 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttc 10259390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 24077538 - 24077459
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttc 198  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| ||||    
T  24077538 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttc 24077459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 28120331 - 28120245
Alignment:
Q  117 tcaagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttg 203  Q
    ||||||||||||||  ||||| |||||||| ||||||| |||| ||||||| ||||||||||| ||||||| ||||| |||||||||    
T  28120331 tcaagacttggtaaaactttcataaatattctgataaagatttataatgtttgtgcaatattcattaatttactcatttttcctttg 28120245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 1975318 - 1975378
Alignment:
Q  146 tttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaa 206  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||||||    
T  1975318 tttgataaatatttctaatatttgtgcaatattccttaatttgctcatttttcctttgaaa 1975378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 49711744 - 49711684
Alignment:
Q  143 tattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttg 203  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||    
T  49711744 tattttgataaatatttctaatgtttgtgcactattccttaatttgctcatttttcctttg 49711684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 23992439 - 23992319
Alignment:
Q  144 attttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcg 243  Q
    ||||||||||||||||  |||||| |||||||||||  |||||||||||| ||||||||| || ||        | | ||||||||||||||||||||||    
T  23992439 attttgataaatatttaaaatgtttgtgcaatattcagtaatttgctcatttttcctttggaacaaattttttaa-acgatacgttattcaacccgtgcg 23992341  T
Q  244 aagcacaaatttgtaactagtt 265  Q
    || ||||  |||||||||||||    
T  23992340 aaacacaggtttgtaactagtt 23992319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 21564986 - 21565065
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttc 198  Q
    |||||||| |||  ||||| |||||||||||||||| |||| |||||||  |||||||||| ||||||||||||| ||||    
T  21564986 aagacttgataaaactttcataaatattttgataaagatttataatgtttatgcaatattcattaatttgctcatttttc 21565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 15650532 - 15650485
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||    
T  15650532 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 15650485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 28134749 - 28134707
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||| |||||||||||||||||| |||||||||||||    
T  28134749 atacgttattgaacccgtgcgaagcacaagtttgtaactagtt 28134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 43014637 - 43014591
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||    
T  43014637 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagt 43014591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 8532224 - 8532265
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  8532224 atacgttattcaacccgtgcgaagcacggatttgtaactagt 8532265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 35707699 - 35707656
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  35707699 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 35707656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 2118191 - 2118233
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  2118191 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 2118233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 3839141 - 3839095
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||||||||||||||||||||| ||||||||||   ||||||||||||    
T  3839141 acaagatacgttattcaacccttgcgaagcacgggtttgtaactagt 3839095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 5759342 - 5759384
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  5759342 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 5759384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 248
Target Start/End: Original strand, 16895945 - 16895975
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagca 248  Q
    |||||||||||||||||||||||||||||||    
T  16895945 acaagatacgttattcaacccgtgcgaagca 16895975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 36858002 - 36858044
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||| ||||||||||||||||  ||||||||||||||    
T  36858002 atacgttattgaacccgtgcgaagcacggatttgtaactagtt 36858044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 574218 - 574177
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  574218 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 574177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 3759280 - 3759321
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  3759280 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 3759321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 12680671 - 12680630
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  12680671 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 12680630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 39713537 - 39713496
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  39713537 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 39713496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 29706196 - 29706148
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||| |||||||||||||   ||| ||||||||||    
T  29706196 acaagatacgttattcaatccgtgcgaagcacgggtttataactagttt 29706148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 29706273 - 29706233
Alignment:
Q  108 tttcatgaatcaagacttggtaaggctttcgtaaatatttt 148  Q
    |||||||||||||||||| ||||||||||  ||||||||||    
T  29706273 tttcatgaatcaagacttcgtaaggctttgataaatatttt 29706233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 9e-45; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 54 - 265
Target Start/End: Complemental strand, 12661167 - 12660957
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||||||||||||||||||||||||||| || | |||||||||  ||||| | ||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  12661167 ttcatcttaattattatgatgttttcctagtattatgaacaaaacatatgttgttttcatgaatcaagacttggaaaggctttcataaatatttggataa 12661068  T
Q  154 atatttctaatgttggtgcaatattctttaatttgctcatctttcct-ttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaa 252  Q
    |||||||||||||| ||||||||||| |||||||||| || |||| | |||||||||        ||||||||||||||| ||||| ||||||||||       
T  12661067 atatttctaatgtttgtgcaatattcattaatttgcttat-tttcatcttgaaataa-tttttttacaagatacgttatttaacccatgcgaagcacggg 12660970  T
Q  253 tttgtaactagtt 265  Q
    |||||||||||||    
T  12660969 tttgtaactagtt 12660957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 11696979 - 11697086
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  11696979 ttcaacttaattatgatcatgtttttctggtttcatgaacaaagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttgataa 11697078  T
Q  154 atatttct 161  Q
    ||||||||    
T  11697079 atatttct 11697086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 203
Target Start/End: Complemental strand, 4634992 - 4634847
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||||||||||| | || |||||||||||  |||||||||||| |||||   ||||||||||||||| ||||||||| |||||| |||||| ||||||||    
T  4634992 ttcatcttaattttaataatgttttcctgaactcatgaacaaaatatat---cttttcatgaatcaatacttggtaaagctttcataaata-tttgataa 4634897  T
Q  154 atatttctaatgttggtgcaatattctttaatttgctcatctttcctttg 203  Q
    | ||   || |||| ||||||||||| ||||||||||||| |||||||||    
T  4634896 agataaatagtgtttgtgcaatattcattaatttgctcatttttcctttg 4634847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 27272610 - 27272728
Alignment:
Q  146 tttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaa 245  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||  || ||        ||||||||||||||||||||||||||||    
T  27272610 tttgagaaatatttctaatgtttgtgcaatattctttaatttgctcatttttcgtttagaacaa-atttattacaagatacgttattcaacccgtgcgaa 27272708  T
Q  246 gcacaaatttgtaactagtt 265  Q
    ||||   |||||||||||||    
T  27272709 gcacgggtttgtaactagtt 27272728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 20663063 - 20662974
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  20663063 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 20662974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 44213180 - 44213091
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  44213180 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 44213091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 30548426 - 30548337
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| |||||||| |||| |||| ||| |||||    
T  30548426 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgatcatttttcttttaaaata 30548337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 12250006 - 12249910
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||||||||||||||||   ||||||||||||||    
T  12250006 gtgcaatattcattaatttgctcatttttcctttggaacaaatttttt-acaagatatgttattcaacccgtgcgaagcacgggtttgtaactagttt 12249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 23626150 - 23626054
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||||||||||||||||   ||||||||||||||    
T  23626150 gtgcaatattcattaatttgctcatttttcctttggaacaaatttttt-acaagatatgttattcaacccgtgcgaagcacgggtttgtaactagttt 23626054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 39445201 - 39445297
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||||||||||||||||   ||||||||||||||    
T  39445201 gtgcaatattcattaatttgctcatttttcctttggaacaaatttttt-acaagatatgttattcaacccgtgcgaagcacgggtttgtaactagttt 39445297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 2961055 - 2961008
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||    
T  2961055 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 2961008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 5836240 - 5836283
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||| |||||||||||||||||  ||||||||||||||    
T  5836240 atacgttattgaacccgtgcgaagcacaggtttgtaactagttt 5836283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 41978859 - 41978902
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||    
T  41978859 atacgttattcaacccgtgcgaagcacgagtttctaactagttt 41978902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 11697105 - 11697151
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||||||||||||||||||||||||| ||||||   ||||||||||||    
T  11697105 acaagatacgttattcaacccgtgcaaagcacgggtttgtaactagt 11697151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 18375599 - 18375557
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  18375599 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 18375557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 36778480 - 36778522
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  36778480 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 36778522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 41158644 - 41158686
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  41158644 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 41158686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 40586484 - 40586443
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  40586484 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 40586443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 7391324 - 7391364
Alignment:
Q  225 acgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||   |||||||||||||    
T  7391324 acgttattcaacccgtgcgaagcacgggtttgtaactagtt 7391364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 21543231 - 21543259
Alignment:
Q  220 aagatacgttattcaacccgtgcgaagca 248  Q
    |||||||||||||||||||||||||||||    
T  21543231 aagatacgttattcaacccgtgcgaagca 21543259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 67 - 265
Target Start/End: Complemental strand, 2624919 - 2624721
Alignment:
Q  67 ttatgatgttttcctggtctcatgaacaaagtatatgctctttt-catgaatcaagacttggtaaggctttcgtaaatattttgataaatatttctaatg 165  Q
    ||||||||||||| |||||||||||||||| |||||| | |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  2624919 ttatgatgttttcgtggtctcatgaacaaaatatatgttttttttcataaatcaagacttggtaaggctttcataaatattttgataaatatttttaatg 2624820  T
Q  166 ttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    || ||||||| ||  ||||||| ||||| |||||||||||| ||        ||||||||||||||||||||||||||| ||||   |||||||||||||    
T  2624819 tttgtgcaatttttcttaattttctcatttttcctttgaaacaa-tttttttacaagatacgttattcaacccgtgcgatgcacgggtttgtaactagtt 2624721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 54 - 262
Target Start/End: Complemental strand, 22975927 - 22975720
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctctttt--catgaatcaagacttggtaaggctttcgtaaatattttgat 151  Q
    |||||||||||  ||||||||||||| |||||||||||||||| |||||| | ||||  ||| |||||||||| |||||| ||||| |||||||||||||    
T  22975927 ttcatcttaatc-ttatgatgttttcgtggtctcatgaacaaaatatatgtttttttttcataaatcaagact-ggtaagactttcataaatattttgat 22975830  T
Q  152 aaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaa 251  Q
    |||||||| ||||||| ||||||| ||  ||||||||||||| ||||||||| || ||        |||||||||||||||||||||||||||||||||     
T  22975829 aaatatttttaatgtttgtgcaatttttcttaatttgctcatttttcctttggaacaa-tttttttacaagatacgttattcaacccgtgcgaagcacag 22975731  T
Q  252 atttgtaacta 262  Q
    |||||||||||    
T  22975730 atttgtaacta 22975720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 54 - 262
Target Start/End: Original strand, 23812474 - 23812681
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctctttt--catgaatcaagacttggtaaggctttcgtaaatattttgat 151  Q
    |||||||||||  ||||||||||||| |||||||||||||||| |||||| | ||||  ||| |||||||||| |||||| ||||| |||||||||||||    
T  23812474 ttcatcttaatc-ttatgatgttttcgtggtctcatgaacaaaatatatgtttttttttcataaatcaagact-ggtaagactttcataaatattttgat 23812571  T
Q  152 aaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaa 251  Q
    |||||||| ||||||| ||||||| ||  ||||||||||||| ||||||||| || ||        |||||||||||||||||||||||||||||||||     
T  23812572 aaatatttttaatgtttgtgcaatttttcttaatttgctcatttttcctttggaacaa-tttttttacaagatacgttattcaacccgtgcgaagcacag 23812670  T
Q  252 atttgtaacta 262  Q
    |||||||||||    
T  23812671 atttgtaacta 23812681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 265
Target Start/End: Original strand, 33300501 - 33300710
Alignment:
Q  57 atcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaa-ata-ttttgataaa 154  Q
    ||||||||||||||| ||| ||| || ||||||||||||| ||||||||||||||||||||||||||  |||||||||||  ||| | |    |||||||    
T  33300501 atcttaattattatgttgtgttcttgatctcatgaacaaaatatatgctcttttcatgaatcaagaccaggtaaggctttgataagacacaaatgataaa 33300600  T
Q  155 tatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatt 254  Q
    ||||||||||||| ||| ||||||| ||||||| ||||| |||||||||||| ||        |||| ||||| |||||||||||||||||| ||   ||    
T  33300601 tatttctaatgtttgtgaaatattccttaatttactcatttttcctttgaaacaa-tatttttacaatatacgatattcaacccgtgcgaagtacgggtt 33300699  T
Q  255 tgtaactagtt 265  Q
    |||||||||||    
T  33300700 tgtaactagtt 33300710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 11470935 - 11470837
Alignment:
Q  63 attattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaatatttct 161  Q
    ||||| || ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||  |||||| ||||||||||| |||||||||||    
T  11470935 attatgatcatgttttcctggtttcatgaacaaagtatatcctctgttcatgaatcaagacttggtagagctttcataaatattttggtaaatatttct 11470837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 264
Target Start/End: Original strand, 33979081 - 33979226
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnna 218  Q
    |||||||| |||  ||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||||||||||        |    
T  33979081 aagacttgataaaactttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttgaaataatttttttta 33979180  T
Q  219 caagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||| |||||||||| |||||||||||| |||   ||||||||||||    
T  33979181 caaaatacgttattaaacccgtgcgaaacacgggtttgtaactagt 33979226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 18389316 - 18389232
Alignment:
Q  63 attattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattt 147  Q
    ||||| || ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||    
T  18389316 attatgatcatgttttcctggtttcatgaacaaagtatatcctcttttcatgaatcaagacttggtagagctttggtaaatattt 18389232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 250020 - 250109
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  250020 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 250109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 12579922 - 12579833
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  12579922 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 12579833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 11272664 - 11272739
Alignment:
Q  86 tcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaatatttct 161  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||  |||||| ||||||||||| |||||||||||    
T  11272664 tcatgaataaagtatatcctcttttcatgaatcaagatttggtagagctttcataaatattttggtaaatatttct 11272739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 18389214 - 18389166
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||    
T  18389214 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 18389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 33319044 - 33319092
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||    
T  33319044 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 33319092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 35160123 - 35160166
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  35160123 atacgttattcaacccgtgcgaagcacggatttgtaactagttt 35160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 1072624 - 1072580
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||    
T  1072624 atacgttattgaacccgtgcgaaacacgaatttgtaactagtttg 1072580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 3052128 - 3052076
Alignment:
Q  141 aatattttgataaatatttctaatgttggtgcaatattctttaatttgctcat 193  Q
    |||||||||||||| |||| |||| || ||||||||||| |||||||||||||    
T  3052128 aatattttgataaagatttataatatttgtgcaatattcattaatttgctcat 3052076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 4425855 - 4425951
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||| ||||| |||||        ||||||||||||| |||||||||||||| |||   ||||||||||||||    
T  4425855 gtgcaatattcattaatttgctcattttttctttggaataattttttt-acaagatacgttagtcaacccgtgcgaaacacgggtttgtaactagttt 4425951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 1932335 - 1932382
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||| |||||||||||||||||||||   |||||||||||||    
T  1932335 acaagatacgatattcaacccgtgcgaagcacgggtttgtaactagtt 1932382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 6966278 - 6966235
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  6966278 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 6966235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 249
Target Start/End: Original strand, 8615078 - 8615109
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcac 249  Q
    ||||||||||||||||||||||||||||||||    
T  8615078 acaagatacgttattcaacccgtgcgaagcac 8615109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 11272757 - 11272804
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||| ||||||||| ||||||||||||  ||||||||||||||    
T  11272757 acaagatacattattcaactcgtgcgaagcacggatttgtaactagtt 11272804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 22373181 - 22373138
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||| |||||||||||||||||  ||||||||||||||    
T  22373181 atacgttattgaacccgtgcgaagcacatgtttgtaactagttt 22373138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 24447795 - 24447838
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  24447795 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 24447838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 9978745 - 9978707
Alignment:
Q  227 gttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  9978745 gttattcaacccgtgcgaagcacgagtttgtaactagtt 9978707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 15276543 - 15276585
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||| |||||||||||||||| | |||||||||||||    
T  15276543 atacgttattgaacccgtgcgaagcacgagtttgtaactagtt 15276585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 4110061 - 4110102
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  4110061 atacgttattcaacccgtgcgaagcacgggtttgtaactagt 4110102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 5753173 - 5753125
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||| |||||||||||||||||||||||| ||   ||||||||||||||    
T  5753173 acaatatacgttattcaacccgtgcgaagtacgggtttgtaactagttt 5753125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 266
Target Start/End: Original strand, 12851 - 13066
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctctttt------catgaatcaagacttggtaaggctttcgtaaatattt 147  Q
    |||||||||||  ||||||||||||| |||||||||||||||| |||||| | ||||      ||| ||| ||||||||||||||||||| |||||||||    
T  12851 ttcatcttaatc-ttatgatgttttcgtggtctcatgaacaaaatatatgttttttttttcttcataaat-aagacttggtaaggctttcataaatattt 12948  T
Q  148 tgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagc 247  Q
    |||||||||||| ||||||| ||||||| ||  ||||||| ||||| ||||||||| || ||        ||||||||||||||||||||||||||||||    
T  12949 tgataaatatttttaatgtttgtgcaatttttcttaatttcctcatttttcctttggaacaa-tttttttacaagatacgttattcaacccgtgcgaagc 13047  T
Q  248 acaaatttgtaactagttt 266  Q
    ||   ||||||||||||||    
T  13048 acgggtttgtaactagttt 13066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 8e-33; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 27840384 - 27840491
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  27840384 ttcaacttaattatgatcatgtttttctggtttcatgaacaaagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttgataa 27840483  T
Q  154 atatttct 161  Q
    ||||||||    
T  27840484 atatttct 27840491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 12960477 - 12960582
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||  |||||| ||||||||||| |||    
T  12960477 ttcaacttaattatgatcatgttttcctgatttcatgaacatagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttggtaa 12960576  T
Q  154 atattt 159  Q
    ||||||    
T  12960577 atattt 12960582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 42299002 - 42298912
Alignment:
Q  57 atcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattt 147  Q
    ||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||| |||||||||| |||||| | |||  |||||||||    
T  42299002 atcttaattattatgttgttttcctgatctcatggacaaaatatatgctcttttcaagaatcaagacctggtaatgttttgataaatattt 42298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 19033791 - 19033702
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  19033791 aagacttgataaagctttcataaatattttgataaaaatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 19033702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 20720845 - 20720934
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  20720845 aagacttgataaagctttcataaatattttgataaaaatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 20720934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 20765507 - 20765596
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  20765507 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 20765596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 29491085 - 29491174
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  29491085 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 29491174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 264
Target Start/End: Complemental strand, 23476755 - 23476587
Alignment:
Q  84 tctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattcttta 183  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||||| ||||            ||||||||||||||||||| ||||||||||  |||    
T  23476755 tctcatgaacaaaatatatgttattttcatgaatcaagacttggtaagacttt------------gataaatatttctaatgtttgtgcaatatttctta 23476668  T
Q  184 atttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||| ||||||||  || ||        | |||||| ||||||||||||||| |||||||   ||||||||||||    
T  23476667 atttgctcatttttcctttagaacaattatttttataagatatgttattcaacccgtgtgaagcacgggtttgtaactagt 23476587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 34282239 - 34282150
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| |||  ||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  34282239 aagacttgataaaactttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 34282150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 8998425 - 8998485
Alignment:
Q  143 tattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttg 203  Q
    |||||||||||||||||||||||||  |||| ||||| ||||||||||||| |||||||||    
T  8998425 tattttgataaatatttctaatgtttttgcactattccttaatttgctcatttttcctttg 8998485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 45121953 - 45122011
Alignment:
Q  145 ttttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttg 203  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||| ||| |||||    
T  45121953 ttttgataaatatttctaatgtttgtgcactattccttaatttgctcattttttctttg 45122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 9226115 - 9226019
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||||||||||||||||   ||||||||||||||    
T  9226115 gtgcaatattcattaatttgctcatttttcctttggaacaattttttt-acaagatatgttattcaacccgtgcgaagcacgggtttgtaactagttt 9226019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 33230082 - 33230026
Alignment:
Q  134 tttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgct 190  Q
    |||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  33230082 tttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgct 33230026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 12960602 - 12960649
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||    
T  12960602 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtt 12960649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 38434372 - 38434277
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||||||||||||||||   |||||||||||||    
T  38434372 gtgcaatattcattaatttgctcatttttcctttggaacaattttttt-acaagatatgttattcaacccgtgcgaagcacgggtttgtaactagtt 38434277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 691289 - 691333
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  691289 atacgttattcaacccgtgcgaagcacgggtttgtaactagtttg 691333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 21669273 - 21669229
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||||||||||||||||||||||   |||||||||||||||    
T  21669273 atacgttattcaacccgtgcgaagcacgggtttgtaactagtttg 21669229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 42996888 - 42996984
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| ||||||||||| |||||||||||   ||||||||||||||    
T  42996888 gtgcaatattcattaatttgctcatttttcctttggaacaaatttttt-acaagatatgttattcaacctgtgcgaagcacgggtttgtaactagttt 42996984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 27840509 - 27840556
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||||||||||||||||| ||||||   |||||||||||||    
T  27840509 acaagatacgttattcaacccgtgcaaagcacgggtttgtaactagtt 27840556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 39278238 - 39278281
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  39278238 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 39278281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 2067893 - 2067847
Alignment:
Q  220 aagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||| |||||||| |||||||||||||  |||||||||||||||    
T  2067893 aagatacattattcaatccgtgcgaagcacggatttgtaactagttt 2067847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 31896855 - 31896813
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  31896855 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 31896813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 39648023 - 39647981
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  39648023 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 39647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 272625 - 272588
Alignment:
Q  230 attcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  272625 attcaacccgtgcgaagcacggatttgtaactagtttg 272588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 17817721 - 17817762
Alignment:
Q  225 acgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||   ||||||||||||||    
T  17817721 acgttattcaacccgtgcgaagcacgggtttgtaactagttt 17817762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 23762388 - 23762347
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||| ||| |||||||||||||| ||||||||||||    
T  23762388 atacgttattgaactcgtgcgaagcacaagtttgtaactagt 23762347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 42298926 - 42298885
Alignment:
Q  145 ttttgataaatatttctaatgttggtgcaatattctttaatt 186  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||    
T  42298926 ttttgataaatatttataatgtttgtgcaatattccttaatt 42298885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 266
Target Start/End: Complemental strand, 34266084 - 34265874
Alignment:
Q  57 atcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaa-ata-ttttgataaa 154  Q
    ||||||||||||||| ||| ||| || ||||||||||||| ||||||||||||||||||||||| || ||||||||||||  ||| | |    |||||||    
T  34266084 atcttaattattatgttgtgttcttgatctcatgaacaaaatatatgctcttttcatgaatcaatacctggtaaggctttgataagacacaaatgataaa 34265985  T
Q  155 tatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatt 254  Q
    ||||||||||||| ||| ||||||| ||||||||||||| ||| |||||||| ||        |||| ||||| ||||||||||||||||||||||  ||    
T  34265984 tatttctaatgtttgtgaaatattccttaatttgctcattttttctttgaaacaa-tttttttacaatatacgatattcaacccgtgcgaagcacaggtt 34265886  T
Q  255 tgtaactagttt 266  Q
    ||||| ||||||    
T  34265885 tgtaattagttt 34265874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 20767433 - 20767533
Alignment:
Q  61 taattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaatatttc 160  Q
    ||||||| || ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||| ||||||||||    
T  20767433 taattatgatcatgttttcctggtttcatgaacaaagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttggtaaatatttc 20767532  T
Q  161 t 161  Q
    |    
T  20767533 t 20767533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 26429294 - 26429187
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataa 153  Q
    |||| ||||||||| || ||||||| ||| | ||||||||| ||||||| ||||||||||||||||||||||||||  |||||| ||||||||||| |||    
T  26429294 ttcaacttaattatgatcatgtttttctgttttcatgaacatagtatatcctcttttcatgaatcaagacttggtagagctttcataaatattttggtaa 26429195  T
Q  154 atatttct 161  Q
    ||||||||    
T  26429194 atatttct 26429187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 3929920 - 3929812
Alignment:
Q  54 ttcatcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaata-ttttgata 152  Q
    |||| ||||||||| ||  |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||  |||||| |||||| ||||| ||    
T  3929920 ttcaacttaattatgatcgtgttttcctggtttcatgaacaaagtatatcatcttttcatgaatcaagacttggtagagctttcataaatatttttggta 3929821  T
Q  153 aatatttct 161  Q
    |||||||||    
T  3929820 aatatttct 3929812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 266
Target Start/End: Complemental strand, 23909911 - 23909714
Alignment:
Q  57 atcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaata 156  Q
    ||||||||||||||| |||||||    ||||||||||||| ||||||||||||| ||||||||||||  | ||| |||||            || |||||    
T  23909911 atcttaattattatgttgttttctcaatctcatgaacaaaatatatgctctttttatgaatcaagacccgataaagcttt------------gagaaata 23909824  T
Q  157 tttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttg 256  Q
    ||||||||||| ||||||||||| ||||||||||||| ||| |||||||| ||        |||| ||| ||| |||||||||||||||||||   ||||    
T  23909823 tttctaatgtttgtgcaatattccttaatttgctcattttttctttgaaacaattttttttacaaaatatgttcttcaacccgtgcgaagcacgggtttg 23909724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 28565524 - 28565428
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        ||||||||||||||||||||||||||||||||   ||||||||||||||    
T  28565524 gtgcaatattcattaatttgctcatttttcctttggaacaattttttt-acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 28565428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 266
Target Start/End: Original strand, 28631758 - 28631854
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||||||||||||||||   ||||||||||||||    
T  28631758 gtgcaatattcattaatttgctcatttttcctttggaacaaatttttt-acaagatatgttattcaacccgtgcgaagcacgggtttgtaactagttt 28631854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 13662211 - 13662116
Alignment:
Q  172 caatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||| |||||||| |||| ||||||||| |||||        |||||||| |||||||||||||||||||||||   |||||||||| ||||    
T  13662211 caatattcattaatttgatcatttttcctttggaataattttttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactaatttg 13662116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 3929792 - 3929746
Alignment:
Q  220 aagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||    
T  3929792 aagatacgttattcaacccgtgcgaagcacgggtttgtaactagttt 3929746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 1954462 - 1954395
Alignment:
Q  142 atattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataa 209  Q
    |||||| |||||| ||||||||| || ||| ||||||| ||||||||||||| ||| ||||| |||||    
T  1954462 atatttggataaagatttctaatatttgtgtaatattcattaatttgctcattttttctttggaataa 1954395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 4893968 - 4894011
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  4893968 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 4894011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 10763588 - 10763631
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  10763588 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 10763631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 42682592 - 42682635
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  42682592 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 42682635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 29840731 - 29840689
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  29840731 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 29840689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 38896815 - 38896857
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  38896815 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 38896857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 20767553 - 20767598
Alignment:
Q  220 aagatacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||| |||||||||||||   |||||||||||||    
T  20767553 aagatacgttattcaagccgtgcgaagcacgggtttgtaactagtt 20767598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 47137860 - 47137901
Alignment:
Q  224 tacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    ||||||||||||||||||||||||||   |||||||||||||    
T  47137860 tacgttattcaacccgtgcgaagcacgggtttgtaactagtt 47137901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 266
Target Start/End: Complemental strand, 1691622 - 1691425
Alignment:
Q  57 atcttaattattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaata 156  Q
    ||||||||||||||| |||||||    ||||||||||||| ||||||||||||| ||||||||||||  | ||| |||||            || |||||    
T  1691622 atcttaattattatgttgttttctcaatctcatgaacaaaatatatgctctttttatgaatcaagacccgataaagcttt------------gagaaata 1691535  T
Q  157 tttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttg 256  Q
    ||||||||||| ||||||||||| ||||||||||||| ||| |||||||||||        |||| ||| ||| |||||||||||||||||||   ||||    
T  1691534 tttctaatgtttgtgcaatattccttaatttgctcattttttctttgaaataattttttttacaaaatatgttcttcaacccgtgcgaagcacgggtttg 1691435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 7364673 - 7364757
Alignment:
Q  63 attattatgatgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattt 147  Q
    ||||| || ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||    
T  7364673 attatgatcatgttttcctggtttcatgaacaaagtatatcctcttttcatgaatcaagacttggtagagctttggtaaatattt 7364757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 32726180 - 32726064
Alignment:
Q  73 tgttttcctggtctcatgaacaaagtatatgctcttttcatgaatcaagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgc 172  Q
    ||||||||||||||||||| |||| | ||| |  |||||||||||||||||||| ||  |||||||||||||||||| |||| ||||||||||||  |||    
T  32726180 tgttttcctggtctcatgagcaaaatgtatccctttttcatgaatcaagacttgatagagctttcgtaaatattttggtaaaaatttctaatgtttatgc 32726081  T
Q  173 aatattctttaatttgc 189  Q
    ||||| | |||||||||    
T  32726080 aatatccattaatttgc 32726064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 24278957 - 24279032
Alignment:
Q  126 ggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctt 201  Q
    ||||| |||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||||||    
T  24278957 ggtaaagctttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcctt 24279032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 7984103 - 7984041
Alignment:
Q  146 tttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||||    
T  7984103 tttgataaatatttctaatgtttgtgcaatgttccttaatttgctcatttttcctttgaaata 7984041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 11866362 - 11866273
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||||||| ||| | |||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  11866362 aagacttgataaagttttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 11866273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Original strand, 3711069 - 3711143
Alignment:
Q  134 tttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaata 208  Q
    |||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||| |||| ||| |||||    
T  3711069 tttcataaatattttgataaagatttataatgtttgtgcaatattcattaatttgctcatttttcttttaaaata 3711143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 35357755 - 35357681
Alignment:
Q  119 aagacttggtaaggctttcgtaaatattttgataaatatttctaatgttggtgcaatattctttaatttgctcat 193  Q
    |||||||| ||| |||||| |||||||||||||||| |||| ||||||| || |||||||| |||||||||||||    
T  35357755 aagacttgataaagctttcataaatattttgataaagatttataatgtttgtacaatattcattaatttgctcat 35357681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 224 - 264
Target Start/End: Complemental strand, 10821013 - 10820973
Alignment:
Q  224 tacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10821013 tacgttattcaacccgtgcgaagcacaaatttgtaactagt 10820973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 7364775 - 7364824
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||    
T  7364775 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtttg 7364824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 7768800 - 7768736
Alignment:
Q  144 attttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataa 209  Q
    |||||||||||||||| ||||||| ||||||||||   |||||||||||| |||||||||||||||    
T  7768800 attttgataaatatttataatgtttgtgcaatatttaataatttgctcat-tttcctttgaaataa 7768736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 25124179 - 25124142
Alignment:
Q  44 tattccgcaattcatcttaattattatgatgttttcct 81  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25124179 tattccgcaattcatcttaattattatgatgttttcct 25124142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 4289069 - 4289027
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  4289069 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 4289027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 7984153 - 7984108
Alignment:
Q  84 tctcatgaacaaagtatatgctcttttcatgaatcaagacttggta 129  Q
    ||||||||||||| |||||||  |||| ||||||||||||||||||    
T  7984153 tctcatgaacaaaatatatgccatttttatgaatcaagacttggta 7984108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 18137901 - 18137942
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||| |||||||||||||||||  ||||||||||||    
T  18137901 atacgttattgaacccgtgcgaagcacaggtttgtaactagt 18137942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 15084332 - 15084296
Alignment:
Q  230 attcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||| | ||||||||||||||    
T  15084332 attcaacccgtgcgaagcacgagtttgtaactagttt 15084296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 26828460 - 26828504
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||||| ||||||||||||||||   |||||||||||||||    
T  26828460 atacgttattgaacccgtgcgaagcacgggtttgtaactagtttg 26828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 30922144 - 30922096
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| |||||||||||| |||||||   ||||||||||||||    
T  30922144 acaagatacgtaattcaacccgtgtgaagcacgggtttgtaactagttt 30922096  T

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Target: scaffold0004 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 81010 - 81070
Alignment:
Q  146 tttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaa 206  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  81010 tttgataaatatttataatgttcgtgcaatattccttaatttgctcatttttcctttgaaa 81070  T

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Target: scaffold0499 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 10764 - 10706
Alignment:
Q  145 ttttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttg 203  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||    
T  10764 ttttgataaatatttctaatgtttgtgcactattccttaatttgctcatttttcctttg 10706  T

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Target: scaffold0073 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 33508 - 33448
Alignment:
Q  143 tattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttg 203  Q
    ||||||||||||||||||||||||| |||||  |||| ||||||||||||| |||||||||    
T  33508 tattttgataaatatttctaatgtttgtgcacgattccttaatttgctcatttttcctttg 33448  T

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Target: scaffold0440 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 249
Target Start/End: Complemental strand, 8435 - 8329
Alignment:
Q  142 atattttgataaatatttctaatgttggtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtg 241  Q
    |||||| |||| | |||||||||||| ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||| ||||    
T  8435 atatttggatatagatttctaatgtttgtgcaatattcattaatttgctcatttttcctttggaacaa-tttttttacaagatatgttattcaacacgtg 8337  T
Q  242 cgaagcac 249  Q
    ||||||||    
T  8336 cgaagcac 8329  T

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Target: scaffold0249 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 24965 - 24916
Alignment:
Q  218 acaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||    
T  24965 acaagatacgttattcaacccgtgcgaagcacgggtttgtaactagtttg 24916  T

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Target: scaffold0088 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 52787 - 52691
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||| |||||||||||||||||||||||   ||||||||||||||    
T  52787 gtgcaatattcattaatttgctcatttttcctttggaacaaatttttt-acaagatatgttattcaacccgtgcgaagcacgggtttgtaactagttt 52691  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 267
Target Start/End: Complemental strand, 151973 - 151878
Alignment:
Q  172 caatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||| |||||||| |||| ||||||||| |||||        |||||||| |||||||||||||||||||||||   |||||||||| ||||    
T  151973 caatattcattaatttgatcatttttcctttggaataattttttttacaagatatgttattcaacccgtgcgaagcacgggtttgtaactaatttg 151878  T

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Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 61660 - 61754
Alignment:
Q  169 gtgcaatattctttaatttgctcatctttcctttgaaataannnnnnnnacaagatacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    ||||||||||| ||||||||||||| ||||||||| || ||        |||||||||| |||||||||||||||||||||   ||||||||||||    
T  61660 gtgcaatattcattaatttgctcatttttcctttggaacaaatttttt-acaagatacgatattcaacccgtgcgaagcacgggtttgtaactagt 61754  T

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Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 55560 - 55604
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtttg 267  Q
    |||||||||||||| ||||||||||||   |||||||||||||||    
T  55560 atacgttattcaactcgtgcgaagcacgggtttgtaactagtttg 55604  T

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Target: scaffold0069 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 14648 - 14691
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagttt 266  Q
    |||||||||||||||||||||||||||   ||||||||||||||    
T  14648 atacgttattcaacccgtgcgaagcacgggtttgtaactagttt 14691  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 17442 - 17400
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||||||||||||||||||||   |||||||||||||    
T  17442 atacgttattcaacccgtgcgaagcacgggtttgtaactagtt 17400  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 12255 - 12213
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagtt 265  Q
    |||||||||| |||||||||||||||||  |||||||||||||    
T  12255 atacgttattgaacccgtgcgaagcacaggtttgtaactagtt 12213  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 48567 - 48526
Alignment:
Q  223 atacgttattcaacccgtgcgaagcacaaatttgtaactagt 264  Q
    |||||||||| |||||||||||||||||  ||||||||||||    
T  48567 atacgttattgaacccgtgcgaagcacaggtttgtaactagt 48526  T

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