View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1107_low_141 (Length: 202)
Name: NF1107_low_141
Description: NF1107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1107_low_141 |
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Alignment Details
Target: chr7 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18352832 - 18352958
Alignment:
| Q |
1 |
aattatggtggttagaaagaactaagaacattttgttcatactattttggaaaataaaccttttgtatatttgtgcatgtgtaatcttacgagtaatgcc |
100 |
Q |
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| T |
18352832 |
aattatggtggttagaaagaactatgaacattttgttcatactattttggaaaataaaccttttgtatatttgtgcatgtgtaatcttacgagtaatgcc |
18352931 |
T |
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| Q |
101 |
agctgataacactcattttagtataat |
127 |
Q |
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|| | || |||||||||||| |||||| |
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| T |
18352932 |
agttaatgacactcattttaatataat |
18352958 |
T |
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