View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1107_low_33 (Length: 438)

Name: NF1107_low_33
Description: NF1107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1107_low_33
NF1107_low_33
[»] chr6 (14 HSPs)
chr6 (13-383)||(27700787-27701155)
chr6 (13-383)||(27312774-27313144)
chr6 (13-383)||(26634157-26634537)
chr6 (13-383)||(26740133-26740513)
chr6 (13-383)||(27583579-27583934)
chr6 (90-163)||(25487868-25487941)
chr6 (105-224)||(27659788-27659909)
chr6 (90-163)||(26061116-26061189)
chr6 (90-163)||(26081086-26081159)
chr6 (106-179)||(27712414-27712486)
chr6 (89-179)||(27586434-27586523)
chr6 (105-169)||(27587894-27587958)
chr6 (98-167)||(27340499-27340568)
chr6 (98-167)||(27401239-27401308)
[»] chr4 (4 HSPs)
chr4 (67-250)||(5083526-5083711)
chr4 (392-432)||(9452967-9453007)
chr4 (324-381)||(7342253-7342310)
chr4 (328-380)||(51808810-51808862)
[»] chr2 (2 HSPs)
chr2 (82-169)||(17989363-17989450)
chr2 (326-381)||(22878194-22878249)
[»] chr1 (2 HSPs)
chr1 (392-432)||(46424154-46424194)
chr1 (326-374)||(12564425-12564473)
[»] chr3 (2 HSPs)
chr3 (326-379)||(22667499-22667552)
chr3 (326-379)||(22724138-22724191)


Alignment Details
Target: chr6 (Bit Score: 312; Significance: 1e-176; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 13 - 383
Target Start/End: Original strand, 27700787 - 27701155
Alignment:
Q  13 aatattttagaatgcatcatatctaacactagatcacattatatatgaccaatagcagttcattaagtcggattctagagaacaaaggtcaagactcttg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27700787 aatattttagaatgcatcatatctaacactagatcacattatatctgaccaatagcagttcattaagtcggattctagagaacaaaggtcacgactcttg 27700886  T
Q  113 caaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcatctagatcaaagcgatcttttctagtaaggacagagtagttt 212  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  27700887 caaaaggatctcataaatgttggttcttagatttagttctttatcacacattacttcttctagatcaaagcgatcttttctagtaaggacagagtggttt 27700986  T
Q  213 gagaaagccatccaaccataaccttttcgacctggtacactacataaaataatgtcaaatcattttcatataagttaagttgcattcaaataagctataa 312  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27700987 gagaaatccatccaaccataacctttttgacctggtacgctacataaaataatgtcaaatcattttcatataagctaagttgcattcaaataagctataa 27701086  T
Q  313 gtcgatttaaaacaacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaacaaa 383  Q
    | ||||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27701087 gccgatttaaaaca--agtttcacaagtgcttctatcagtttataagctcaaataagtcaatcgaaacaaa 27701155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 13 - 383
Target Start/End: Original strand, 27312774 - 27313144
Alignment:
Q  13 aatattttagaatgcatcatatctaacactagatcacattatatatgaccaatagcagttcattaagtcggattctagagaacaaaggtcaagactcttg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  27312774 aatattttagaatgcatcatatctaacactagatcacattatatctgaccaaaaccagttcattaagtcggattctagagaacaaaggtcaagactcttg 27312873  T
Q  113 caaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcatctagatcaaagcgatcttttctagtaaggacagagtagttt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  27312874 caaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcttctagatcaaagtgatctttcctagtaaggacagagtagttt 27312973  T
Q  213 gagaaagccatccaaccataaccttttcgacctggtacactacataaaataatgtcaaatcattttcatataagttaagttgcattcaaataagctataa 312  Q
    |||||| ||||||||||||||||||||  | ||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27312974 gagaaatccatccaaccataaccttttatatctgatacgctacataaaataatgtcaaatcattttcatataagctaagttgcattcaaataagctataa 27313073  T
Q  313 gtcgatttaaaacaacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaacaaa 383  Q
    |||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  27313074 gtcgatttaaaacaacagtctcacaaatacttctatgagtttataagctcaaataagtcaatcgaaacaaa 27313144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 13 - 383
Target Start/End: Complemental strand, 26634537 - 26634157
Alignment:
Q  13 aatattttagaatgcatcatatctaacactagatcacattatatatgaccaatagcagttcattaagtcggattctagagaacaaa------ggtcaaga 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||      ||||| ||    
T  26634537 aatatattagaatgcatcatatctaacactagatcacattatatctgaccaatagcagttctttaagtcggattctagagaacaaattaaagggtcacga 26634438  T
Q  107 ctcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcatctagatcaaagcgatctttt----ctagtaaggac 202  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||     |||||||||||    
T  26634437 ctcttgcagaaggatttcataaatgtcggttcttagatttagttctttatcacacattaattcttctagatcaaagatatctttaattactagtaaggac 26634338  T
Q  203 agagtagtttgagaaagccatccaaccataaccttttcgacctggtacactacataaaataatgtcaaatcattttcatataagttaagttgcattcaaa 302  Q
    ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26634337 agactagtttgagaaatccatccaaccataacctttttgacctggtacactacataaaataatgtcaaatcattttcatataagttaagttgcattcaaa 26634238  T
Q  303 taagctataagtcgatttaaaacaacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaacaaa 383  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26634237 taagctataagtcgatttaaaacaacagtctcacaagtgcttctatcagtttataagctcaattaagtcaatcgaaacaaa 26634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 13 - 383
Target Start/End: Complemental strand, 26740513 - 26740133
Alignment:
Q  13 aatattttagaatgcatcatatctaacactagatcacattatatatgaccaatagcagttcattaagtcggattctagagaacaaa------ggtcaaga 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||      ||||| ||    
T  26740513 aatatattagaatgcatcatatctaacactagatcacattatatctgaccaatagcagttctttaagtcggattctagagaacaaattaaagggtcacga 26740414  T
Q  107 ctcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcatctagatcaaagcgatctttt----ctagtaaggac 202  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||     |||||||||||    
T  26740413 ctcttgcagaaggatttcataaatgtcggttcttagatttagttctttatcacacattaattcttctagatcaaagatatctttaattactagtaaggac 26740314  T
Q  203 agagtagtttgagaaagccatccaaccataaccttttcgacctggtacactacataaaataatgtcaaatcattttcatataagttaagttgcattcaaa 302  Q
    ||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26740313 agactagtttgagaaatccatccaaccataacctttttgacctggtacactacataaaataatgtcaaatcattttcatataagttaagttgcattcaaa 26740214  T
Q  303 taagctataagtcgatttaaaacaacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaacaaa 383  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26740213 taagctataagtcgatttaaaacaacagtctcacaagtgcttctatcagtttataagctcaattaagtcaatcgaaacaaa 26740133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 13 - 383
Target Start/End: Original strand, 27583579 - 27583934
Alignment:
Q  13 aatattttagaatgcatcatatctaacactagatcacattatatatgaccaatagcagttcattaagtcggattctagagaacaaaggtcaagactcttg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27583579 aatattttagaatgcatcatatctaacactagatcacattatatctgaacaatagcagttcattaagtcggattctagagaacaaaggtcacgactcttg 27583678  T
Q  113 caaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcatctagatcaaagcgatcttttctagtaaggacagagtagttt 212  Q
    ||||||||| ||||||||||||||||             |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  27583679 caaaaggatgtcataaatgtcggttc-------------tttatcacacattacttcttctagatcaaagcgatctttcctagtaaggacagagtagttt 27583765  T
Q  213 gagaaagccatccaaccataaccttttcgacctggtacactacataaaataatgtcaaatcattttcatataagttaagttgcattcaaataagctataa 312  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27583766 gagaaatccatccaaccataacctttttgacctggtacactacataaaatgatgtcaaatcattttcatataagttaagttgcattcaaataagctataa 27583865  T
Q  313 gtcgatttaaaacaacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaacaaa 383  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27583866 gtcgatttaaaaca--agtctcacaagtgcttctatcagtttataagctcaaataagtcaatagaaacaaa 27583934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 25487941 - 25487868
Alignment:
Q  90 gagaacaaaggtcaagactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacat 163  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||    
T  25487941 gagaacaaaagtcacgactcttgcaaaaggatctcatgaatgtcggttctcagatttatttctttatcccacat 25487868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 224
Target Start/End: Original strand, 27659788 - 27659909
Alignment:
Q  105 gactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcatctagatcaaagcgatcttttctagtaaggacag 204  Q
    ||||||||||||||||||||||||||||||||| | |||||||  |||||| ||||||| ||||| |  | ||| ||  | ||||||| |||||||||||    
T  27659788 gactcttgcaaaaggatctcataaatgtcggttatcagatttaactctttaccacacataacttcttgcatatccaaaagctcttttccagtaaggacag 27659887  T
Q  205 ag--tagtttgagaaagccatc 224  Q
    ||  |||||||||||| |||||    
T  27659888 agtttagtttgagaaacccatc 27659909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 26061189 - 26061116
Alignment:
Q  90 gagaacaaaggtcaagactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacat 163  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||||||||  |||||| ||||||||| |||||    
T  26061189 gagaacaaaagtcacgactcttgcaaaaggatctcatgaatgtcggttctcggatttatttctttatcccacat 26061116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 26081159 - 26081086
Alignment:
Q  90 gagaacaaaggtcaagactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacat 163  Q
    ||||||||| |||| |||||||||||||||||||||| ||||||||||||  |||||| ||||||||| |||||    
T  26081159 gagaacaaaagtcacgactcttgcaaaaggatctcatgaatgtcggttctcggatttatttctttatcccacat 26081086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 27712414 - 27712486
Alignment:
Q  106 actcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcatctagatca 179  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||  ||||||||| |||| ||||    
T  27712414 actcttgcaaaaggatctcataaatgttggttcttagatttagtt-tttatcatgcattacttcctctaaatca 27712486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 27586434 - 27586523
Alignment:
Q  89 agagaacaaaggtcaagactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttcatctagatca 179  Q
    ||||||||||  |||  ||||||||||||||||||||||||||| ||||||||||||||||| |||||||   |||||||| |||| ||||    
T  27586434 agagaacaaaactcaccactcttgcaaaaggatctcataaatgttggttcttagatttagtt-tttatcatgaattacttcctctaaatca 27586523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 27587894 - 27587958
Alignment:
Q  105 gactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttc 169  Q
    ||||| ||||||||||||| ||||||||||||| | ||||| ||||||||||| |||||||||||    
T  27587894 gactcatgcaaaaggatcttataaatgtcggttgtcagattcagttctttatcccacattacttc 27587958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 27340499 - 27340568
Alignment:
Q  98 aggtcaagactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattact 167  Q
    |||||| |||||| |||||| |||||||| ||||| || ||| ||||| ||||||||||| || ||||||    
T  27340499 aggtcatgactctggcaaaacgatctcatgaatgttggctctcagattcagttctttatcccatattact 27340568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 27401239 - 27401308
Alignment:
Q  98 aggtcaagactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattact 167  Q
    |||||| |||||| |||||| |||||||| ||||| || ||| ||||| ||||||||||| || ||||||    
T  27401239 aggtcatgactctggcaaaacgatctcatgaatgttggctctcagattcagttctttatcccatattact 27401308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 67 - 250
Target Start/End: Complemental strand, 5083711 - 5083526
Alignment:
Q  67 gcagttcattaagtcggattctagagaacaaaggtcaagactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattac 166  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  5083711 gcagctcaataagtcggattctagagaacaaaggtcatgactcttgcaaaaggatctcataaatgtcagttcttagatttagttctttatcacgcattac 5083612  T
Q  167 ttcatctagatcaaagcgatcttttctagtaaggacagag--tagtttgagaaagccatccaaccataaccttttcgacctggtac 250  Q
    ||| | ||||||| |  | ||||||| ||||||||  |||  |||||||||||| ||||||||||||| || ||| ||||||||||    
T  5083611 ttcttgtagatcagaaagctcttttccagtaaggatggagtttagtttgagaaatccatccaaccatagccgttttgacctggtac 5083526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 432
Target Start/End: Complemental strand, 9453007 - 9452967
Alignment:
Q  392 tgttgctcttttaagatgaagcggtgaattcattaaatata 432  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  9453007 tgttgctcttttaagatgaagcggtaaattcattaaatata 9452967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 7342253 - 7342310
Alignment:
Q  324 acaacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaaca 381  Q
    |||||||||||||||||| || | |||||| ||||| ||| ||||||||||| |||||    
T  7342253 acaacagtctcgcaagtgattatttcagttgataagatcatataagtcaatccaaaca 7342310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 51808862 - 51808810
Alignment:
Q  328 cagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaac 380  Q
    ||||||||||||||||||||  |||  ||||| ||||||||||||||| ||||    
T  51808862 cagtctcgcaagtgcttctactagtagataagttcaaataagtcaatctaaac 51808810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 17989363 - 17989450
Alignment:
Q  82 ggattctagagaacaaaggtcaagactcttgcaaaaggatctcataaatgtcggttcttagatttagttctttatcacacattacttc 169  Q
    ||||||| ||||||| | |||  ||||||||| ||||||||  |||||||| |||||| ||||| ||||||||||| |||||||||||    
T  17989363 ggattctggagaacacaagtcgtgactcttgccaaaggatcggataaatgttggttctcagattcagttctttatcccacattacttc 17989450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 22878194 - 22878249
Alignment:
Q  326 aacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaaca 381  Q
    ||||||||| ||||||||| | |||||  ||||||||||||||||||||| |||||    
T  22878194 aacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 432
Target Start/End: Complemental strand, 46424194 - 46424154
Alignment:
Q  392 tgttgctcttttaagatgaagcggtgaattcattaaatata 432  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  46424194 tgttgctcttttaagatgaagcgatgaattcattaaatata 46424154  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 374
Target Start/End: Complemental strand, 12564473 - 12564425
Alignment:
Q  326 aacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaat 374  Q
    ||||||| | ||||||||| ||||||| |||||||||||||||||||||    
T  12564473 aacagtcacacaagtgcttatatcagtatataagctcaaataagtcaat 12564425  T

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Target: chr3 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 22667499 - 22667552
Alignment:
Q  326 aacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaa 379  Q
    ||||||||| ||||||||| | |||||  ||||||||||||||| |||||||||    
T  22667499 aacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaa 22667552  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 22724138 - 22724191
Alignment:
Q  326 aacagtctcgcaagtgcttctatcagtttataagctcaaataagtcaatcgaaa 379  Q
    ||||||||| ||||||||| | |||||  ||||||||||||||| |||||||||    
T  22724138 aacagtctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaa 22724191  T

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