View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1107_low_7 (Length: 660)
Name: NF1107_low_7
Description: NF1107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1107_low_7 |
 |  |
|
| [»] scaffold0209 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 30 - 644
Target Start/End: Original strand, 48655975 - 48656583
Alignment:
| Q |
30 |
catgtgaactataacaagcatgaattcaatcacgttctttggattggaactatagttcctactcacccaagnnnnnnnggaacaacttagagaaaaataa |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
48655975 |
catgtgaactataacaagcatgaattcaatcacgttctttgga-----actatagttcctactcacccaagaaaaaaaggaacaacttagagaaaaataa |
48656069 |
T |
 |
| Q |
130 |
ataatactatacgttaaaacatttatgaagtttactttttatgtgtaatttttcattttcactactccaactatgtaagaaaatacgtacccaataaacc |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
48656070 |
ataatactatacgttaaaacatttatgaagtttactttttatgtgtaatttttcattttcactactccaaccatgtaagaaaatatgtacccaataaacc |
48656169 |
T |
 |
| Q |
230 |
aagttatttgggctccggtcgcaagacgctcttttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtgcgca |
329 |
Q |
| |
|
|||||||||||||||| || ||||||||||| |||||||| || || ||||||||| |||| || |||| ||||||||||| |||| |||||||| || |
|
|
| T |
48656170 |
aagttatttgggctccagtggcaagacgctcctttccaaggacgtacccgagaaatatcgggctcaattcccaggaagaacaacgcttgacctgtgcaca |
48656269 |
T |
 |
| Q |
330 |
tgcctctctgcatgagtcaaattagttgtctaccattaacgagtcggagaccggtgcgaaagagnnnnnnnnngaatacgtacccaatattttattgaga |
429 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||| | | ||| | |||| |||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
48656270 |
tgcctctctgcatgagctggattagttgttcaccattgatggatcgaaaaccgatgcgaaagagagaaaaaa-gaatacgtactcaatattttattgaga |
48656368 |
T |
 |
| Q |
430 |
attaaatggggaagaatttacacaacgagtgcaattttgttagaaatgttagttgcacaattatttagttgttcatgcaccaacgtatttatgtaatgta |
529 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48656369 |
attaaatggagaagaatttacacaacgagtgcaattttgttagaaatgttagttggacaattatttagttgttcatgcaccaacgtatttatgtaatgta |
48656468 |
T |
 |
| Q |
530 |
tatagttcactttattatgagtttcttttttatcttctcgagtcaaatcaatagttataaatagtgtgttcttataaagttgtcaaatttttgttgttat |
629 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
48656469 |
tatagttcactttattatgagtttcttttttatcttcgcgagtcaaatcaatagttataaatagtatgttcttataaagttgtcaaatttttgttgttat |
48656568 |
T |
 |
| Q |
630 |
aataacattcctcaa |
644 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
48656569 |
aataacattcctcaa |
48656583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0209 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0209
Description:
Target: scaffold0209; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 263 - 347
Target Start/End: Original strand, 12557 - 12639
Alignment:
| Q |
263 |
ttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgagtc |
347 |
Q |
| |
|
||||||| || || ||||||||||||||||||||||| |||| |||||| |||| ||| |||||||||||||| ||||||||| |
|
|
| T |
12557 |
ttccaaggacgtactcgagaaataccgggttcgattcctagg--gaacaacgcttgaccagtgcgcatgcctctacgcatgagtc |
12639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 263 - 347
Target Start/End: Original strand, 583797 - 583879
Alignment:
| Q |
263 |
ttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgagtc |
347 |
Q |
| |
|
||||||| || || ||||||||||||||||||||||| |||| |||||| |||| ||| |||||||||||||| ||||||||| |
|
|
| T |
583797 |
ttccaaggacgtactcgagaaataccgggttcgattcctagg--gaacaacgcttgaccagtgcgcatgcctctacgcatgagtc |
583879 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 18374011 - 18374075
Alignment:
| Q |
281 |
gaaataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgag |
345 |
Q |
| |
|
|||||||| ||||||||||| ||| ||||||| |||| ||| |||||||||||||| ||||||| |
|
|
| T |
18374011 |
gaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgag |
18374075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 10927609 - 10927671
Alignment:
| Q |
283 |
aataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgag |
345 |
Q |
| |
|
||||||||||||||||| ||||| |||||| |||| || |||||||||||||| ||||||| |
|
|
| T |
10927609 |
aataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgag |
10927671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 391
Target Start/End: Complemental strand, 3418680 - 3418512
Alignment:
| Q |
222 |
aataaaccaagttatttgggctccggtcgcaagacgctcttttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacc |
321 |
Q |
| |
|
||||||||||||| ||||| |||| || ||||| |||| || ||||| || ||| | | |||| ||||||||||| |||||| |||||| ||| || |
|
|
| T |
3418680 |
aataaaccaagttgtttggactcccgtggcaaggagctcctt-ccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggcc |
3418582 |
T |
 |
| Q |
322 |
tgtgcgcatgcctctctgcatgagtcaaattagttgtctaccattaacgagtcggagaccggtgcgaaag |
391 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||| ||| ||| ||| | ||| || ||||||||||||| |
|
|
| T |
3418581 |
agtgcgcatgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaaag |
3418512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 566 - 642
Target Start/End: Original strand, 35943165 - 35943241
Alignment:
| Q |
566 |
ctcgagtcaaatcaatagttataaatagtgtgttcttataaagttgtcaaatttttgttgttataataacattcctc |
642 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| || | ||| ||||||||||||| |||||| || ||||||||||| |
|
|
| T |
35943165 |
ctcgagccaaatcaatagttataaattgtgtattttaatacggttgtcaaattttggttgttctagtaacattcctc |
35943241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 41220634 - 41220742
Alignment:
| Q |
283 |
aataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgagtcaaattagttgtctaccattaacgagtcggagaccg |
382 |
Q |
| |
|
||||||||||||||||| |||| |||||| |||| || |||||||||||||| ||||||| | ||||||| || ||| ||| | |||||| |||| |
|
|
| T |
41220634 |
aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccg |
41220733 |
T |
 |
| Q |
383 |
gtgcgaaag |
391 |
Q |
| |
|
||||||||| |
|
|
| T |
41220734 |
gtgcgaaag |
41220742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 2784971 - 2785038
Alignment:
| Q |
323 |
gtgcgcatgcctctctgcatgagtcaaattagttgtctaccattaacgagtcggagaccggtgcgaaa |
390 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| ||| | |||| | |||||||| |||||||||||| |
|
|
| T |
2784971 |
gtgcgcatgcctctacgcatgagtcagattagtcgtccatcattgatgagtcggaaaccggtgcgaaa |
2785038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 41187828 - 41187910
Alignment:
| Q |
263 |
ttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgag |
345 |
Q |
| |
|
||||||| || ||| |||| ||||||| ||| ||||||||||| ||||| |||| ||| |||||||||||||| ||||||| |
|
|
| T |
41187828 |
ttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatgcctctacgcatgag |
41187910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 391
Target Start/End: Complemental strand, 14169737 - 14169608
Alignment:
| Q |
262 |
tttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgagtcaaattagttgtcta |
361 |
Q |
| |
|
|||||||| || |||||| | |||| ||||||||||||| || |||||| ||| ||| ||||||||| |||| ||||||| | |||||| ||||| |
|
|
| T |
14169737 |
tttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtcta |
14169638 |
T |
 |
| Q |
362 |
ccattaacgagtcggagaccggtgcgaaag |
391 |
Q |
| |
|
||||| | |||||| ||||||||||||| |
|
|
| T |
14169637 |
ccattggtgggtcggaaaccggtgcgaaag |
14169608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 42770778 - 42770705
Alignment:
| Q |
263 |
ttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctct |
336 |
Q |
| |
|
||||||| || ||| ||||||||||||||||| ||||| ||| |||||| |||| || |||||||||||||| |
|
|
| T |
42770778 |
ttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctct |
42770705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 345
Target Start/End: Original strand, 5855466 - 5855584
Alignment:
| Q |
226 |
aaccaagttatttgggctccggtcgcaagacgctcttttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtg |
325 |
Q |
| |
|
||||||||| |||||||||| || ||||| |||| || ||||| || |||||| | ||||||||||||||||| |||| |||||| |||| || ||| |
|
|
| T |
5855466 |
aaccaagttgtttgggctccagtggcaaggagctcctt-ccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtg |
5855564 |
T |
 |
| Q |
326 |
cgcatgcctctctgcatgag |
345 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
5855565 |
cgcatgcctctacgcatgag |
5855584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.000000001; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 345
Target Start/End: Complemental strand, 14107523 - 14107403
Alignment:
| Q |
224 |
taaaccaagttatttgggctccggtcgcaagacgctcttttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctg |
323 |
Q |
| |
|
||||||||||| |||||||||| || ||||| |||| || | ||| || |||||| | ||||||||||||||||| |||| |||||| |||| ||| | |
|
|
| T |
14107523 |
taaaccaagttgtttgggctccagtggcaaggagctccttccaaag-acgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccag |
14107425 |
T |
 |
| Q |
324 |
tgcgcatgcctctctgcatgag |
345 |
Q |
| |
|
||| ||||||||| ||||||| |
|
|
| T |
14107424 |
tgcacatgcctctacgcatgag |
14107403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 21898595 - 21898759
Alignment:
| Q |
226 |
aaccaagttatttgggctccggtcgcaagacgctcttttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtg |
325 |
Q |
| |
|
||||||||| ||||||||| || ||||| |||| || ||||| || ||| || | ||||||||||||||||| |||| |||||| |||| || ||| |
|
|
| T |
21898595 |
aaccaagttgcttgggctccagtggcaaggagctcctt-ccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtg |
21898693 |
T |
 |
| Q |
326 |
cgcatgcctctctgcatgagtcaaattagttgtctaccattaacgagtcggagaccggtgcgaaag |
391 |
Q |
| |
|
||||||||||| ||||||| | |||||| || ||| ||| | |||||| ||||||||||||| |
|
|
| T |
21898694 |
cgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag |
21898759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 336
Target Start/End: Complemental strand, 2271465 - 2271357
Alignment:
| Q |
225 |
aaaccaagttatttgggctccggtcgcaagacgctcttttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgt |
324 |
Q |
| |
|
|||||||||| ||||||||| || ||||| |||| || ||||| || |||||| | |||||||||||||||||| || ||||||| ||||| || || |
|
|
| T |
2271465 |
aaaccaagttgcttgggctccagtggcaaggagctcctt-ccaaggacgtattcggggaataccgggttcgattctcag--agaacaacgcttagccagt |
2271369 |
T |
 |
| Q |
325 |
gcgcatgcctct |
336 |
Q |
| |
|
||||||| |||| |
|
|
| T |
2271368 |
gcgcatgtctct |
2271357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 596
Target Start/End: Original strand, 8474926 - 8474958
Alignment:
| Q |
564 |
ttctcgagtcaaatcaatagttataaatagtgt |
596 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |
|
|
| T |
8474926 |
ttctcaagtcaaatcaatagttataaatagtgt |
8474958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 32150229 - 32150189
Alignment:
| Q |
273 |
atattcgagaaataccgggttcgattcttaggaagaacaat |
313 |
Q |
| |
|
||||| |||||||| ||| |||||||||||||||||||||| |
|
|
| T |
32150229 |
atatttgagaaatatcggattcgattcttaggaagaacaat |
32150189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.000000001; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 42086271 - 42086435
Alignment:
| Q |
226 |
aaccaagttatttgggctccggtcgcaagacgctcttttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtg |
325 |
Q |
| |
|
||||||||| |||||||||||| ||||| |||| || ||||| || || |||| ||||||||||||||||| ||| |||||| |||| ||| ||| |
|
|
| T |
42086271 |
aaccaagttgcttgggctccggtggcaaggagctcctt-ccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtg |
42086369 |
T |
 |
| Q |
326 |
cgcatgcctctctgcatgagtcaaattagttgtctaccattaacgagtcggagaccggtgcgaaag |
391 |
Q |
| |
|
||||||||||| ||||||| | |||||| ||| ||| || | |||||| ||||||||||||| |
|
|
| T |
42086370 |
cgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag |
42086435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 12766131 - 12766184
Alignment:
| Q |
283 |
aataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctct |
336 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||| || ||| |||||||||| |
|
|
| T |
12766131 |
aataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctct |
12766184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 5732027 - 5731919
Alignment:
| Q |
283 |
aataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgagtcaaattagttgtctaccattaacgagtcggagaccg |
382 |
Q |
| |
|
||||||||||||||||| |||| |||||| |||| || |||||||||||||| | ||||| || |||||| || ||| ||| | |||||| |||| |
|
|
| T |
5732027 |
aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccg |
5731928 |
T |
 |
| Q |
383 |
gtgcgaaag |
391 |
Q |
| |
|
||||||||| |
|
|
| T |
5731927 |
gtgcgaaag |
5731919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 391
Target Start/End: Original strand, 54261165 - 54261333
Alignment:
| Q |
222 |
aataaaccaagttatttgggctccggtcgcaagacgctcttttccaagtacatattcgagaaataccgggttcgattcttaggaagaacaatgcttaacc |
321 |
Q |
| |
|
||||||||||||| |||||||||| || ||||| |||| || ||||| || || | | ||||||||||||||||| ||||| |||||| |||| || |
|
|
| T |
54261165 |
aataaaccaagttgtttgggctccagtggcaaggagctcctt-ccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggcc |
54261263 |
T |
 |
| Q |
322 |
tgtgcgcatgcctctctgcatgagtcaaattagttgtctaccattaacgagtcggagaccggtgcgaaag |
391 |
Q |
| |
|
|||||||||||||| ||||||| | |||||| || ||| ||| | |||||| ||||||||||||| |
|
|
| T |
54261264 |
agtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag |
54261333 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 11687217 - 11687145
Alignment:
| Q |
283 |
aataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgagtcaaattagt |
355 |
Q |
| |
|
||||||||||| |||||| ||| ||||||||||| || |||||||||||||| | |||||||| |||||| |
|
|
| T |
11687217 |
aataccgggtttgattctcagggggaacaatgcttggccagtgcgcatgcctctacgtatgagtcagattagt |
11687145 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 365137 - 365204
Alignment:
| Q |
278 |
cgagaaataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctctctgcatgag |
345 |
Q |
| |
|
|||| ||||||||||||||||| |||| |||||| |||||| | |||||||||||||| ||||||| |
|
|
| T |
365137 |
cgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgcatgag |
365204 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 29151942 - 29151995
Alignment:
| Q |
283 |
aataccgggttcgattcttaggaagaacaatgcttaacctgtgcgcatgcctct |
336 |
Q |
| |
|
||||||||||||||||| ||||||||||| | || ||| |||||||||||||| |
|
|
| T |
29151942 |
aataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatgcctct |
29151995 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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