View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11080_high_17 (Length: 231)
Name: NF11080_high_17
Description: NF11080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11080_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 27143360 - 27143569
Alignment:
| Q |
1 |
aaatagtgataaaatatgggaagtacctggcgaggaccaaagcctactgcagaaaatttatctttcatttcctgaacacttgctttctcccaaagtggaa |
100 |
Q |
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| T |
27143360 |
aaatagtgataaaatatgggaagtacctggcgaggaccaaagcctactgcagaaaatttatctttcatttcctgaacacttgctttctcccaaagtggaa |
27143459 |
T |
|
| Q |
101 |
ttctcccctctggatctgcctcgtcagtatcagtcctaccaaattgcctatcaaacaaaccccactgatccaaaacgaaaattggatgtgttccatgatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27143460 |
ttctcccctctggatctgcctcgtcagtatcagtcctaccaaattgcctatcgaacaaaccccactgatccaaaacgaaaattggatgtgttccatgatc |
27143559 |
T |
|
| Q |
201 |
gtgtattcgt |
210 |
Q |
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|||||||||| |
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| T |
27143560 |
gtgtattcgt |
27143569 |
T |
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