View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11080_low_4 (Length: 555)

Name: NF11080_low_4
Description: NF11080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11080_low_4
NF11080_low_4
[»] chr4 (75 HSPs)
chr4 (1-275)||(48530348-48530623)
chr4 (296-540)||(48530865-48531102)
chr4 (192-271)||(48557423-48557502)
chr4 (329-396)||(46472721-46472788)
chr4 (339-396)||(4415477-4415534)
chr4 (329-396)||(2623581-2623648)
chr4 (329-396)||(8080503-8080570)
chr4 (329-396)||(16072051-16072118)
chr4 (329-396)||(29963079-29963146)
chr4 (329-396)||(30188525-30188592)
chr4 (329-396)||(43621940-43622007)
chr4 (481-516)||(48558595-48558630)
chr4 (331-396)||(16071623-16071688)
chr4 (339-396)||(19879397-19879454)
chr4 (360-396)||(23454808-23454844)
chr4 (339-410)||(11493062-11493133)
chr4 (329-396)||(11987210-11987277)
chr4 (329-396)||(20943693-20943760)
chr4 (329-396)||(22007968-22008035)
chr4 (329-396)||(26487791-26487858)
chr4 (329-396)||(29771970-29772037)
chr4 (329-396)||(35683329-35683396)
chr4 (330-396)||(48554426-48554492)
chr4 (339-396)||(480198-480255)
chr4 (339-396)||(1924499-1924556)
chr4 (339-396)||(5519723-5519780)
chr4 (339-396)||(6785982-6786039)
chr4 (339-396)||(6786418-6786475)
chr4 (339-396)||(11987643-11987700)
chr4 (339-396)||(12294182-12294239)
chr4 (363-396)||(16071404-16071437)
chr4 (339-396)||(16959147-16959204)
chr4 (339-396)||(19054215-19054272)
chr4 (339-396)||(19326581-19326638)
chr4 (339-396)||(19689452-19689509)
chr4 (339-396)||(19878960-19879017)
chr4 (339-396)||(24285196-24285253)
chr4 (339-396)||(24749720-24749777)
chr4 (339-396)||(24750144-24750201)
chr4 (339-396)||(26903028-26903085)
chr4 (339-396)||(35822543-35822600)
chr4 (360-401)||(37056421-37056462)
chr4 (339-396)||(37255119-37255176)
chr4 (339-396)||(38992081-38992138)
chr4 (339-396)||(39766988-39767045)
chr4 (339-396)||(42511694-42511751)
chr4 (339-396)||(51864117-51864174)
chr4 (339-396)||(55173099-55173156)
chr4 (339-396)||(56319586-56319643)
chr4 (368-396)||(1828900-1828928)
chr4 (340-396)||(2343199-2343255)
chr4 (360-396)||(2904630-2904666)
chr4 (360-396)||(5496964-5497000)
chr4 (360-396)||(5512151-5512187)
chr4 (339-399)||(11492538-11492598)
chr4 (368-396)||(16078698-16078726)
chr4 (360-396)||(23458273-23458309)
chr4 (360-396)||(28984927-28984963)
chr4 (368-400)||(29384580-29384612)
chr4 (360-396)||(29965299-29965335)
chr4 (360-400)||(30794555-30794595)
chr4 (368-396)||(32800800-32800828)
chr4 (360-396)||(36703870-36703906)
chr4 (360-396)||(37874921-37874957)
chr4 (360-400)||(38348886-38348926)
chr4 (360-396)||(39150606-39150642)
chr4 (360-396)||(39766563-39766599)
chr4 (368-396)||(40186079-40186107)
chr4 (360-396)||(42512150-42512186)
chr4 (360-396)||(45429037-45429073)
chr4 (360-396)||(49332436-49332472)
chr4 (368-396)||(49459988-49460016)
chr4 (368-396)||(51863686-51863714)
chr4 (360-396)||(55811083-55811119)
chr4 (360-396)||(55811530-55811566)
[»] chr7 (46 HSPs)
chr7 (329-396)||(29127838-29127905)
chr7 (329-396)||(1982996-1983063)
chr7 (329-396)||(29165473-29165540)
chr7 (329-396)||(33653989-33654056)
chr7 (339-396)||(3231949-3232006)
chr7 (339-396)||(8721583-8721640)
chr7 (339-396)||(11290553-11290610)
chr7 (339-396)||(23594926-23594983)
chr7 (329-396)||(1975247-1975314)
chr7 (329-396)||(24518491-24518558)
chr7 (329-396)||(33690318-33690385)
chr7 (339-410)||(47273054-47273125)
chr7 (339-413)||(34826155-34826228)
chr7 (363-396)||(1702548-1702581)
chr7 (331-396)||(3143401-3143466)
chr7 (367-400)||(7900123-7900156)
chr7 (339-396)||(19204257-19204314)
chr7 (339-396)||(22202643-22202700)
chr7 (339-396)||(22235121-22235178)
chr7 (339-396)||(22478792-22478849)
chr7 (339-396)||(23595349-23595406)
chr7 (360-397)||(23974196-23974233)
chr7 (360-397)||(26253174-26253211)
chr7 (339-396)||(29185788-29185845)
chr7 (360-413)||(30421388-30421441)
chr7 (339-396)||(33602939-33602996)
chr7 (339-396)||(43301924-43301981)
chr7 (339-396)||(43543075-43543132)
chr7 (339-396)||(45011543-45011600)
chr7 (339-396)||(45021408-45021465)
chr7 (360-396)||(11290117-11290153)
chr7 (360-396)||(18773671-18773707)
chr7 (368-412)||(18798480-18798524)
chr7 (360-396)||(19919274-19919310)
chr7 (360-396)||(21751989-21752025)
chr7 (368-396)||(21973521-21973549)
chr7 (368-400)||(27585848-27585880)
chr7 (329-393)||(28036123-28036187)
chr7 (360-396)||(33507625-33507661)
chr7 (360-396)||(35472033-35472069)
chr7 (360-396)||(38228626-38228662)
chr7 (360-396)||(39099062-39099098)
chr7 (360-396)||(42913243-42913279)
chr7 (368-396)||(45011119-45011147)
chr7 (360-396)||(46414346-46414382)
chr7 (360-396)||(48608300-48608336)
[»] chr3 (47 HSPs)
chr3 (329-396)||(51949784-51949851)
chr3 (329-396)||(53594333-53594400)
chr3 (329-395)||(41544420-41544486)
chr3 (339-400)||(1631279-1631340)
chr3 (339-396)||(51444816-51444873)
chr3 (360-396)||(54239381-54239417)
chr3 (360-396)||(54239840-54239876)
chr3 (329-396)||(6135021-6135088)
chr3 (329-396)||(8151103-8151170)
chr3 (329-396)||(8399329-8399396)
chr3 (329-396)||(28482568-28482635)
chr3 (329-396)||(28511380-28511447)
chr3 (329-396)||(36181386-36181453)
chr3 (339-396)||(6471413-6471470)
chr3 (339-396)||(7922819-7922876)
chr3 (331-396)||(16301257-16301322)
chr3 (339-396)||(20043840-20043897)
chr3 (339-396)||(21863691-21863748)
chr3 (339-396)||(25656802-25656859)
chr3 (339-396)||(26859757-26859814)
chr3 (339-396)||(27018253-27018310)
chr3 (339-396)||(31184956-31185013)
chr3 (339-396)||(31752488-31752545)
chr3 (339-396)||(32596910-32596967)
chr3 (363-396)||(33898518-33898551)
chr3 (371-400)||(38174294-38174323)
chr3 (339-400)||(42373737-42373798)
chr3 (360-401)||(43545365-43545406)
chr3 (339-396)||(50743400-50743457)
chr3 (339-396)||(52718379-52718436)
chr3 (339-396)||(52718815-52718872)
chr3 (339-396)||(54279503-54279560)
chr3 (360-396)||(22607102-22607138)
chr3 (368-400)||(26324667-26324699)
chr3 (360-396)||(26704170-26704206)
chr3 (360-396)||(27107895-27107931)
chr3 (360-396)||(27659219-27659255)
chr3 (360-396)||(28588902-28588938)
chr3 (360-396)||(30640915-30640951)
chr3 (368-396)||(34661475-34661503)
chr3 (360-396)||(35460508-35460544)
chr3 (339-399)||(42163452-42163512)
chr3 (368-396)||(43081138-43081166)
chr3 (360-396)||(43630678-43630714)
chr3 (360-396)||(46710236-46710272)
chr3 (360-396)||(47757215-47757251)
chr3 (360-396)||(54617354-54617390)
[»] chr1 (60 HSPs)
chr1 (329-396)||(30440505-30440572)
chr1 (329-399)||(1607906-1607976)
chr1 (330-396)||(8887372-8887438)
chr1 (329-396)||(18104718-18104785)
chr1 (329-396)||(28868439-28868506)
chr1 (360-399)||(33170344-33170383)
chr1 (329-396)||(37232783-37232850)
chr1 (339-396)||(14292640-14292697)
chr1 (359-396)||(17610716-17610753)
chr1 (339-399)||(46947497-46947557)
chr1 (329-396)||(7534376-7534443)
chr1 (329-396)||(33524250-33524317)
chr1 (329-396)||(33826386-33826453)
chr1 (329-396)||(33841511-33841578)
chr1 (329-396)||(41090036-41090103)
chr1 (339-396)||(2969687-2969744)
chr1 (339-396)||(3336647-3336704)
chr1 (324-396)||(7534000-7534070)
chr1 (339-396)||(9472074-9472131)
chr1 (339-396)||(9472499-9472556)
chr1 (339-396)||(9840408-9840465)
chr1 (339-396)||(11192702-11192759)
chr1 (339-396)||(15369001-15369058)
chr1 (339-396)||(16069860-16069917)
chr1 (339-396)||(17338408-17338465)
chr1 (339-396)||(17935157-17935214)
chr1 (339-396)||(24026178-24026235)
chr1 (339-396)||(27266048-27266105)
chr1 (339-396)||(28334953-28335010)
chr1 (339-396)||(30633483-30633540)
chr1 (363-396)||(35673036-35673069)
chr1 (339-396)||(36042761-36042818)
chr1 (339-396)||(38213091-38213148)
chr1 (339-396)||(41411452-41411509)
chr1 (363-396)||(43485917-43485950)
chr1 (339-396)||(43638934-43638991)
chr1 (339-396)||(47843882-47843939)
chr1 (339-396)||(48689060-48689117)
chr1 (339-396)||(48689496-48689553)
chr1 (339-396)||(49580355-49580412)
chr1 (360-396)||(3792912-3792948)
chr1 (360-396)||(11192266-11192302)
chr1 (360-396)||(12015252-12015288)
chr1 (360-396)||(13565955-13565991)
chr1 (360-396)||(19893680-19893716)
chr1 (368-396)||(21248891-21248919)
chr1 (360-396)||(26073286-26073322)
chr1 (360-396)||(26073743-26073779)
chr1 (360-396)||(30280881-30280917)
chr1 (360-396)||(30633047-30633083)
chr1 (360-396)||(30926483-30926519)
chr1 (360-396)||(31683318-31683354)
chr1 (360-396)||(32825195-32825231)
chr1 (363-399)||(35152821-35152857)
chr1 (360-396)||(37232356-37232392)
chr1 (372-400)||(37950004-37950032)
chr1 (360-396)||(38163368-38163404)
chr1 (360-396)||(39757831-39757867)
chr1 (360-396)||(39763185-39763221)
chr1 (360-396)||(41411909-41411945)
[»] chr2 (33 HSPs)
chr2 (331-396)||(32347715-32347780)
chr2 (329-396)||(13324520-13324587)
chr2 (329-400)||(39007606-39007677)
chr2 (339-396)||(6532475-6532532)
chr2 (329-396)||(12068112-12068180)
chr2 (329-396)||(26968260-26968327)
chr2 (339-398)||(32753453-32753512)
chr2 (329-396)||(40443465-40443532)
chr2 (329-396)||(40957511-40957578)
chr2 (368-410)||(32901455-32901497)
chr2 (339-396)||(6732151-6732208)
chr2 (339-396)||(12603118-12603175)
chr2 (339-396)||(14391305-14391362)
chr2 (363-396)||(22083503-22083536)
chr2 (339-396)||(27251973-27252030)
chr2 (339-396)||(31838144-31838201)
chr2 (339-396)||(31838576-31838633)
chr2 (339-396)||(35808671-35808728)
chr2 (339-396)||(38305936-38305993)
chr2 (329-394)||(39146362-39146427)
chr2 (360-396)||(5192278-5192314)
chr2 (360-396)||(9437490-9437526)
chr2 (360-396)||(10187519-10187555)
chr2 (360-396)||(12602681-12602717)
chr2 (360-396)||(28720770-28720806)
chr2 (360-396)||(35808234-35808270)
chr2 (360-396)||(36072808-36072844)
chr2 (360-396)||(36741442-36741478)
chr2 (360-396)||(38203959-38203995)
chr2 (360-396)||(39120551-39120587)
chr2 (329-393)||(40504645-40504709)
chr2 (360-400)||(41766783-41766823)
chr2 (360-396)||(45133759-45133795)
[»] chr5 (52 HSPs)
chr5 (339-411)||(32064930-32065002)
chr5 (329-396)||(10596632-10596699)
chr5 (329-396)||(26402974-26403041)
chr5 (330-396)||(8646747-8646813)
chr5 (330-396)||(33894665-33894731)
chr5 (360-396)||(4178085-4178121)
chr5 (360-396)||(20961768-20961804)
chr5 (329-396)||(37978640-37978707)
chr5 (329-396)||(39729328-39729395)
chr5 (339-396)||(1008014-1008071)
chr5 (339-396)||(3850769-3850826)
chr5 (339-396)||(4843091-4843148)
chr5 (339-396)||(4843512-4843569)
chr5 (339-396)||(8105630-8105687)
chr5 (339-396)||(8596965-8597022)
chr5 (339-396)||(18907514-18907571)
chr5 (339-396)||(23098319-23098376)
chr5 (339-396)||(26910456-26910513)
chr5 (339-396)||(28137378-28137435)
chr5 (339-396)||(31124515-31124572)
chr5 (339-400)||(36254913-36254974)
chr5 (339-396)||(39026107-39026164)
chr5 (339-396)||(39412772-39412829)
chr5 (339-396)||(40975526-40975583)
chr5 (339-396)||(41044932-41044989)
chr5 (339-396)||(43390937-43390994)
chr5 (339-396)||(43447396-43447453)
chr5 (368-400)||(2394094-2394126)
chr5 (360-396)||(4000965-4001001)
chr5 (360-396)||(6987548-6987584)
chr5 (360-396)||(7001710-7001746)
chr5 (360-396)||(7274934-7274970)
chr5 (360-396)||(7483608-7483644)
chr5 (360-400)||(13955317-13955356)
chr5 (360-396)||(13955759-13955795)
chr5 (360-400)||(14478550-14478590)
chr5 (368-396)||(19104363-19104391)
chr5 (329-396)||(21063873-21063938)
chr5 (360-396)||(26338856-26338892)
chr5 (360-396)||(32065401-32065437)
chr5 (360-396)||(34448687-34448723)
chr5 (360-396)||(34728969-34729005)
chr5 (368-400)||(37250286-37250318)
chr5 (360-396)||(38308546-38308582)
chr5 (360-396)||(39741343-39741379)
chr5 (368-396)||(40360774-40360802)
chr5 (360-396)||(41960446-41960482)
chr5 (360-396)||(42661793-42661829)
chr5 (360-396)||(43211836-43211872)
chr5 (360-396)||(43401178-43401214)
chr5 (360-396)||(43446960-43446996)
chr5 (360-396)||(43515016-43515052)
[»] chr8 (60 HSPs)
chr8 (329-396)||(11097065-11097132)
chr8 (339-397)||(40668866-40668924)
chr8 (331-396)||(5325093-5325158)
chr8 (339-396)||(27343271-27343328)
chr8 (360-400)||(1173177-1173217)
chr8 (329-396)||(2938068-2938136)
chr8 (329-396)||(2828502-2828569)
chr8 (329-396)||(5728684-5728751)
chr8 (329-396)||(35575315-35575382)
chr8 (329-396)||(35778223-35778289)
chr8 (333-396)||(37828657-37828720)
chr8 (329-396)||(42149806-42149873)
chr8 (362-396)||(9376188-9376222)
chr8 (360-410)||(42026266-42026316)
chr8 (339-396)||(109398-109455)
chr8 (360-409)||(2659776-2659825)
chr8 (339-396)||(3612719-3612776)
chr8 (339-396)||(5110399-5110456)
chr8 (368-409)||(8525754-8525795)
chr8 (339-396)||(9375742-9375799)
chr8 (339-396)||(14092490-14092547)
chr8 (339-396)||(16975657-16975714)
chr8 (339-396)||(18150303-18150360)
chr8 (339-396)||(18150741-18150798)
chr8 (339-396)||(23769876-23769933)
chr8 (367-396)||(25099709-25099738)
chr8 (339-396)||(26151548-26151604)
chr8 (339-396)||(29266869-29266926)
chr8 (339-396)||(32800183-32800240)
chr8 (339-396)||(34414935-34414992)
chr8 (343-396)||(34793213-34793266)
chr8 (339-396)||(36091278-36091335)
chr8 (339-396)||(36310919-36310976)
chr8 (339-396)||(36844326-36844383)
chr8 (339-396)||(36844763-36844820)
chr8 (339-396)||(38508555-38508612)
chr8 (339-411)||(4052964-4053036)
chr8 (360-400)||(4418660-4418700)
chr8 (360-396)||(5109569-5109605)
chr8 (360-396)||(6078927-6078963)
chr8 (360-396)||(6082857-6082893)
chr8 (360-396)||(8841739-8841775)
chr8 (360-396)||(12179292-12179328)
chr8 (360-396)||(12423720-12423756)
chr8 (368-396)||(17950454-17950482)
chr8 (360-396)||(18173525-18173561)
chr8 (360-396)||(18252473-18252509)
chr8 (368-400)||(21134817-21134849)
chr8 (360-396)||(22273992-22274028)
chr8 (360-396)||(23769440-23769476)
chr8 (360-396)||(26063781-26063817)
chr8 (360-396)||(26544296-26544332)
chr8 (360-396)||(32875207-32875243)
chr8 (360-396)||(33316221-33316257)
chr8 (368-396)||(34872996-34873024)
chr8 (363-399)||(37529337-37529373)
chr8 (360-396)||(38507773-38507809)
chr8 (360-396)||(38508230-38508266)
chr8 (363-399)||(42309898-42309934)
chr8 (368-400)||(45509627-45509659)
[»] chr6 (23 HSPs)
chr6 (329-396)||(9373399-9373466)
chr6 (329-396)||(19059564-19059631)
chr6 (339-410)||(28663155-28663226)
chr6 (329-409)||(19682443-19682523)
chr6 (329-396)||(33023494-33023561)
chr6 (339-396)||(1336537-1336594)
chr6 (339-396)||(1336974-1337031)
chr6 (339-396)||(4605566-4605623)
chr6 (339-396)||(7268808-7268865)
chr6 (339-396)||(14190980-14191037)
chr6 (339-396)||(26569770-26569827)
chr6 (339-396)||(35117117-35117174)
chr6 (360-396)||(5038968-5039004)
chr6 (368-396)||(7675857-7675885)
chr6 (360-396)||(8440099-8440135)
chr6 (360-396)||(8677618-8677654)
chr6 (332-396)||(9463879-9463943)
chr6 (360-396)||(10685893-10685929)
chr6 (360-396)||(13648986-13649022)
chr6 (360-396)||(22084135-22084171)
chr6 (368-396)||(22734541-22734569)
chr6 (368-396)||(28580358-28580386)
chr6 (360-396)||(34187785-34187821)
[»] scaffold0197 (1 HSPs)
scaffold0197 (331-395)||(3791-3855)
[»] scaffold0076 (1 HSPs)
scaffold0076 (360-396)||(16590-16626)
[»] scaffold0111 (1 HSPs)
scaffold0111 (329-392)||(40358-40421)
[»] scaffold0041 (2 HSPs)
scaffold0041 (339-396)||(28521-28578)
scaffold0041 (360-396)||(28086-28122)
[»] scaffold0022 (1 HSPs)
scaffold0022 (339-396)||(65308-65365)
[»] scaffold0384 (1 HSPs)
scaffold0384 (368-396)||(7311-7339)
[»] scaffold0182 (1 HSPs)
scaffold0182 (360-396)||(18134-18170)
[»] scaffold0164 (1 HSPs)
scaffold0164 (360-400)||(11300-11340)
[»] scaffold0027 (1 HSPs)
scaffold0027 (368-396)||(22618-22646)


Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 48530348 - 48530623
Alignment:
Q  1 gaaatggcggcaacgtcacaagatatgaatcaattccgccaatcgttggagatacgaagacaattaattttg-caaaacctctagtgatggtggacaata 99  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48530348 gaaatggcggcaacgttagaagctataaatcaattccgccaatcgttggagatacgaagacaattaattttgacaaaacctctagtgatggtggacaata 48530447  T
Q  100 ttccctgtgaaattgatgaggttgatataaattactgcttcaattagactattttttatgaattttggtaataattatgagggttatttctctagggttt 199  Q
    |||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48530448 ttccctgtgaaattgatgaggttattataaattactgattcaatttgactattttttatgaattttggtaataatgatgagggttatttctctagggttt 48530547  T
Q  200 gtttttaggttatgttgattctgcattgaacaaggttggtttaaaaaatgtgaatgttactcacattttgaccgtg 275  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48530548 gtttttaggttaggttgattctgcattgaacaaggttggtttgaaaaatgtgaatgttactcacattttgaccgtg 48530623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 296 - 540
Target Start/End: Original strand, 48530865 - 48531102
Alignment:
Q  296 agttgtgatgtaaaatttgttgggtatcgaaagt-gaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatattt 394  Q
    |||||||||||||||||||||||||| ||||||| ||| |||   |||||||||||         |||||  |||||||||||| |||||||||||||||    
T  48530865 agttgtgatgtaaaatttgttgggtaccgaaagtcgaaaaaaaaatttagagcgat---------aagttagaatatttatagggaccaaaaacatattt 48530955  T
Q  395 aatcctgttcttttttattctggtctt-aagagctccttttgatttggtggtgtcaagtaatgcaagattgcaagtgagatccaataaaggttgattatg 493  Q
    || ||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48530956 aaccctattcttttttattctagtcttcaagagctccttttgattttgtggtgtcaagtaatgcaagattgcaagtgagatccaataaaggttgattatg 48531055  T
Q  494 attatattgattacactctaattatgaatgaacttagtatgtgatgt 540  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  48531056 attatattgattacactctaattatgaatgaacttagtatgtgatgt 48531102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 48557423 - 48557502
Alignment:
Q  192 tagggtttgtttttaggttatgttgattctgcattgaacaaggttggtttaaaaaatgtgaatgttactcacattttgac 271  Q
    |||||||||||||| ||||  |||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  48557423 tagggtttgtttttgggttcagttggttctgctacgaacaaggttggtttaaaaaatgtgaatgttactcacattttgac 48557502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 46472788 - 46472721
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  46472788 tgaagaaattttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 46472721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 4415534 - 4415477
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| |||||||||||||||||||||||||||||    
T  4415534 ttttagagggattaaaacgaaaagttgacatatttataggaaccaaaaacatatttaa 4415477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 2623581 - 2623648
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| |||||||||| ||| ||||||||||||||    
T  2623581 tgaagaaattttttagagggactaaaacgaaaagttgacatatttatagaaacaaaaaacatatttaa 2623648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 8080503 - 8080570
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  8080503 tgaagaaaatttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 8080570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 16072051 - 16072118
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||| |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  16072051 tgaagaaatattttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 16072118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 29963146 - 29963079
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||||||||||||||| |  ||||||||||||||    
T  29963146 tgaagaaattttttagagggactaaaacgaaaagttgaaatatttatagggataaaaaacatatttaa 29963079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 30188525 - 30188592
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||  ||||||||||| |||||||||||||||||    
T  30188525 tgaagaaattttttagagggactaaaacgaaaagttggtatatttatagggaccaaaaacatatttaa 30188592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 43622007 - 43621940
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||||||| || ||||||||||||||    
T  43622007 tgaagaaattttttagagggactaaaacgaaaagttgacatatttatagggactaaaaacatatttaa 43621940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 516
Target Start/End: Original strand, 48558595 - 48558630
Alignment:
Q  481 aaggttgattatgattatattgattacactctaatt 516  Q
    ||||||||||||||||||||||||||||||||||||    
T  48558595 aaggttgattatgattatattgattacactctaatt 48558630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 396
Target Start/End: Complemental strand, 16071688 - 16071623
Alignment:
Q  331 aagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||| || || ||||  ||||||| |||||| |||||||||| |||||||||||    
T  16071688 aagaaattttttagagggactaaaacgtaaagttgacatatttttaggaaccaagaacatatttaa 16071623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 19879397 - 19879454
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||| || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  19879397 ttttagagcgactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 19879454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 23454808 - 23454844
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||||||||||||||||||    
T  23454808 aagttgacatatttataggaaccaaaaacatatttaa 23454844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 11493062 - 11493133
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcctgttctttttt 410  Q
    |||||||| || || ||||  ||||||| ||||||||||| ||||||||||||||||| |||  ||||||||    
T  11493062 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaacccttatctttttt 11493133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 11987277 - 11987210
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||    || |||| |||||||||||||||||||||||||||||    
T  11987277 tgaagaaattttttagagggactaaaagaaaaaattgatatatttataggaaccaaaaacatatttaa 11987210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 20943693 - 20943760
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||||||  | |||||||||||||||    
T  20943693 tgaagaaattttttagagggactaaaacgaaaagttgacatatttatagagatcaaaaacatatttaa 20943760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 22008035 - 22007968
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||  ||||||||||| |||||||| ||||||||    
T  22008035 tgaagaaattttttagagggactaaaacgaaaagttggtatatttatagggaccaaaaatatatttaa 22007968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 26487858 - 26487791
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||||||  ||||| || |  ||||||| ||||||||||| |||||||||||||||||    
T  26487858 tgaagaaaatttttagaaggattaaaatgaaaagttgatatatttatagggaccaaaaacatatttaa 26487791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 29771970 - 29772037
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||  |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  29771970 tgaagaaaaattttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 29772037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 35683396 - 35683329
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| ||||| ||||  || |||||||||||||||| |  |||||| |||||||    
T  35683396 tgaagaaattttttagagggattaaaacgaaaaattgaaatatttatagggagtaaaaacttatttaa 35683329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 48554426 - 48554492
Alignment:
Q  330 gaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||| ||||| || |  ||||||| ||||||||||| |  ||||||||||||||    
T  48554426 gaagaaattttttagagggattaaaatgagaagttgatatatttatagggattaaaaacatatttaa 48554492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 480198 - 480255
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  480198 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 480255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 1924499 - 1924556
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||  ||||||||||| |||||||||||||||||    
T  1924499 ttttagagggattaaaacgaaaagttggtatatttatagggaccaaaaacatatttaa 1924556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 5519723 - 5519780
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  5519723 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 5519780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 6786039 - 6785982
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  6786039 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 6785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 6786418 - 6786475
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  6786418 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 6786475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 11987643 - 11987700
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  11987643 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 11987700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 12294182 - 12294239
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  12294182 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 12294239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Original strand, 16071404 - 16071437
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||| |||||||||||||||||||||||||||||    
T  16071404 ttgacatatttataggaaccaaaaacatatttaa 16071437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 16959204 - 16959147
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||| |||||||||||||||||||    
T  16959204 ttttagagggactaaaacgaaaagttgatatatttataagaaccaaaaacatatttaa 16959147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 19054272 - 19054215
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  19054272 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 19054215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 19326638 - 19326581
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  19326638 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 19326581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 19689509 - 19689452
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  19689509 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 19689452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 19879017 - 19878960
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  19879017 ttttagagggactaaaacgagaagttgacatatttatagggaccaaaaacatatttaa 19878960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 24285196 - 24285253
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  24285196 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 24285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 24749777 - 24749720
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  24749777 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 24749720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 24750144 - 24750201
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  24750144 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 24750201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 26903028 - 26903085
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||  ||||| ||||  ||||||  |||||||||||||||||||||||||||||    
T  26903028 ttttagaaggattaaaacgaaaagttggtatatttataggaaccaaaaacatatttaa 26903085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 35822600 - 35822543
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  35822600 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 35822543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 37056421 - 37056462
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcctg 401  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||    
T  37056421 aagttaaaatatttatagggaccaaaatcatatttaatcctg 37056462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 37255176 - 37255119
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  37255176 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 37255119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 38992138 - 38992081
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  38992138 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 38992081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 39766988 - 39767045
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  39766988 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 39767045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 42511751 - 42511694
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  42511751 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 42511694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 51864117 - 51864174
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| ||||||||||| || ||||||||||||||    
T  51864117 ttttagagggattaaaacgaaaagttgacatatttatagggactaaaaacatatttaa 51864174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 55173099 - 55173156
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  55173099 ttttagagagactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 55173156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 56319586 - 56319643
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  56319586 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 56319643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 1828928 - 1828900
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  1828928 atatttataggaaccaaaaacatatttaa 1828900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 2343255 - 2343199
Alignment:
Q  340 tttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||| ||||  || |||| ||||||||||| |||||||||||||||||    
T  2343255 tttagagggattaaaacgaaaaattgacatatttatagggaccaaaaacatatttaa 2343199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 2904666 - 2904630
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  2904666 aagttgatatatttatagggaccaaaaacatatttaa 2904630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 5497000 - 5496964
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  5497000 aagttgacatatttatagggaccaaaaacatatttaa 5496964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 5512151 - 5512187
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  5512151 aagttgacatatttatagggaccaaaaacatatttaa 5512187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 11492598 - 11492538
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcc 399  Q
    |||||||| || || ||||  ||||||| ||||||||||| || |||||||||||||||||    
T  11492598 ttttagagggactaaaacgaaaagttgacatatttatagggactaaaaacatatttaatcc 11492538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 16078698 - 16078726
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  16078698 atatttataggaaccaaaaacatatttaa 16078726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 23458273 - 23458309
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  23458273 aagttgacatatttatagggaccaaaaacatatttaa 23458309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 28984963 - 28984927
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  28984963 aagttgacatatttatagggaccaaaaacatatttaa 28984927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 400
Target Start/End: Complemental strand, 29384612 - 29384580
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||| |||||||||||||||||||||    
T  29384612 atatttatagggaccaaaaacatatttaatcct 29384580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 29965299 - 29965335
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  29965299 aagttgatatatttatagggaccaaaaacatatttaa 29965335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 30794595 - 30794555
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||||||||| | || ||||||||||||||||||    
T  30794595 aagttgaaatatttataagcacaaaaaacatatttaatcct 30794555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 32800828 - 32800800
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  32800828 atatttataggaaccaaaaacatatttaa 32800800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 36703870 - 36703906
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  36703870 aagttgatatatttatagggaccaaaaacatatttaa 36703906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 37874957 - 37874921
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  37874957 aagttgacatatttatagggaccaaaaacatatttaa 37874921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 38348886 - 38348926
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||| ||||||||||| |||||||| ||||||||||||    
T  38348886 aagttgatatatttatagggaccaaaaatatatttaatcct 38348926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 39150642 - 39150606
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  39150642 aagttgacatatttatagggaccaaaaacatatttaa 39150606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 39766599 - 39766563
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  39766599 aagttgacatatttatagggaccaaaaacatatttaa 39766563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 40186107 - 40186079
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  40186107 atatttataggaaccaaaaacatatttaa 40186079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 42512150 - 42512186
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  42512150 aagttgacatatttatagggaccaaaaacatatttaa 42512186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 45429073 - 45429037
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  45429073 aagttgacatatttatagggaccaaaaacatatttaa 45429037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 49332472 - 49332436
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  49332472 aagttgatatatttatagggaccaaaaacatatttaa 49332436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 49459988 - 49460016
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  49459988 atatttataggaaccaaaaacatatttaa 49460016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 51863714 - 51863686
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  51863714 atatttataggaaccaaaaacatatttaa 51863686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 55811119 - 55811083
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  55811119 aagttgacatatttatagggaccaaaaacatatttaa 55811083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 55811530 - 55811566
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  55811530 aagttgacatatttatagggaccaaaaacatatttaa 55811566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 29127905 - 29127838
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||| || || ||||  ||||||| |||||||||||||||||||||||||||||    
T  29127905 tgaagaatttttttagagagactaaaacgaaaagttgacatatttataggaaccaaaaacatatttaa 29127838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 1983063 - 1982996
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||||||| || ||||||||||||||    
T  1983063 tgaagaaattttttagagggactaaaacgaaaagttgacatatttatagggacaaaaaacatatttaa 1982996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 29165473 - 29165540
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || || |  ||||||| ||||||||||| |||||||||||||||||    
T  29165473 tgaagaaattttttagagggactaaaatgaaaagttgatatatttatagggaccaaaaacatatttaa 29165540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 33654056 - 33653989
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  33654056 tgaagaatttttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 33653989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 3232006 - 3231949
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| |||||||||||||||||||||||||||||    
T  3232006 ttttagagggactaaaacgaaaagttgatatatttataggaaccaaaaacatatttaa 3231949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 8721640 - 8721583
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| ||||||||||| |||||||||||||||||    
T  8721640 ttttagagggattaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 8721583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 11290553 - 11290610
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| ||||||||||| |||||||||||||||||    
T  11290553 ttttagagggattaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 11290610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 23594983 - 23594926
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| |||||||||||||||||||||||||||||    
T  23594983 ttttagagggactaaaacgaaaagttgacatatttataggaaccaaaaacatatttaa 23594926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 1975314 - 1975247
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||| ||||||||||||| || || ||||  ||||||| ||||||||||| |||||||| ||||||||    
T  1975314 tgaataaattttttagagtgactaaaacgaaaagttgacatatttatagggaccaaaaatatatttaa 1975247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 24518558 - 24518491
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||||||| ||||| |||   ||||||| ||||||||||| | |||||||||||||||    
T  24518558 tgaagaaaatttttagagggattaaaacaaaaagttgatatatttatagggatcaaaaacatatttaa 24518491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 33690385 - 33690318
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||| ||||| ||||  ||||||| ||||||||||  || ||||||||||||||    
T  33690385 tgaagaatttttttagagagattaaaacgaaaagttgacatatttatagagacgaaaaacatatttaa 33690318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 47273054 - 47273125
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcctgttctttttt 410  Q
    |||||||| || || ||||  ||||||| ||||||||||| ||||||||||||||||| ||| || ||||||    
T  47273054 ttttagagagactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaacccttttatttttt 47273125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 413
Target Start/End: Complemental strand, 34826228 - 34826155
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcctgttcttttttatt 413  Q
    |||||||| || || ||||  ||||||| ||||||||||| ||||||||||||||||| ||| || |||||||||    
T  34826228 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa-cctttttttttttatt 34826155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 1702581 - 1702548
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||| |||||||||||||||||||||||||||||    
T  1702581 ttgatatatttataggaaccaaaaacatatttaa 1702548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 396
Target Start/End: Original strand, 3143401 - 3143466
Alignment:
Q  331 aagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||| |||||||||| || || ||||  ||||||| ||||||||||| | |||||||||||||||    
T  3143401 aagaatttttttagagggactaaaacgaaaagttgacatatttatagggatcaaaaacatatttaa 3143466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Complemental strand, 7900156 - 7900123
Alignment:
Q  367 aatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||| ||||||||||||||||||||||    
T  7900156 aatatttatagaaaccaaaaacatatttaatcct 7900123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 19204257 - 19204314
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||||| |||||||||||||||    
T  19204257 ttttagagggactaaaacgaaaagttgatatatttataggaatcaaaaacatatttaa 19204314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 22202643 - 22202700
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  22202643 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 22202700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 22235178 - 22235121
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  22235178 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 22235121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 22478849 - 22478792
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  22478849 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 22478792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 23595349 - 23595406
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  23595349 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 23595406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 23974196 - 23974233
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaat 397  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  23974196 aagttgatatatttataggaacaaaaaacatatttaat 23974233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 397
Target Start/End: Complemental strand, 26253211 - 26253174
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaat 397  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  26253211 aagttgacatatttatagggaccaaaaacatatttaat 26253174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 29185845 - 29185788
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  29185845 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 29185788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 30421388 - 30421441
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcctgttcttttttatt 413  Q
    ||||||| ||||||||||| ||||||||||||||||| ||| |  |||||||||    
T  30421388 aagttgacatatttatagggaccaaaaacatatttaaccctttatttttttatt 30421441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 33602939 - 33602996
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  33602939 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 33602996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 43301924 - 43301981
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  43301924 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 43301981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 43543075 - 43543132
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || |||||||  ||||||  ||||||||||| |||||||||||||||||    
T  43543075 ttttagagggactagaacgaaaagttggtatatttatagggaccaaaaacatatttaa 43543132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 45011543 - 45011600
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  45011543 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 45011600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 45021408 - 45021465
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||||||||||| |||||||||    
T  45021408 ttttagagggactaaaacgaaaagttgacatatttataggaaccaaaagcatatttaa 45021465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 11290153 - 11290117
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  11290153 aagttgacatatttataggatccaaaaacatatttaa 11290117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 18773671 - 18773707
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  18773671 aagttgatatatttatagggaccaaaaacatatttaa 18773707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 412
Target Start/End: Original strand, 18798480 - 18798524
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcctgttcttttttat 412  Q
    |||||||||||||| |||||||||||||| ||| || ||||||||    
T  18798480 atatttataggaactaaaaacatatttaaccctatttttttttat 18798524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 19919310 - 19919274
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  19919310 aagttgatatatttatagggaccaaaaacatatttaa 19919274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 21751989 - 21752025
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  21751989 aagttgatatatttatagggaccaaaaacatatttaa 21752025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 21973549 - 21973521
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  21973549 atatttataggaaccaaaaacatatttaa 21973521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 400
Target Start/End: Complemental strand, 27585880 - 27585848
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||| |||||||||||||||||||||    
T  27585880 atatttatagggaccaaaaacatatttaatcct 27585848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 28036187 - 28036123
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatt 393  Q
    ||||||| |||||||||| || || ||||  ||||| | ||||||||||| ||||||||||||||    
T  28036187 tgaagaagttttttagagggactaaaacgaaaagttaacatatttatagggaccaaaaacatatt 28036123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 33507625 - 33507661
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  33507625 aagttgacatatttatagggaccaaaaacatatttaa 33507661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 35472033 - 35472069
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  35472033 aagttgatatatttataggaacgaaaaacatatttaa 35472069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 38228662 - 38228626
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  38228662 aagttgacatatttatagggaccaaaaacatatttaa 38228626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 39099062 - 39099098
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  39099062 aagttgacatatttataggaaacaaaaacatatttaa 39099098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 42913279 - 42913243
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  42913279 aagttgacatatttatagggaccaaaaacatatttaa 42913243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 45011147 - 45011119
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  45011147 atatttataggaaccaaaaacatatttaa 45011119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 46414346 - 46414382
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  46414346 aagttgatatatttatagggaccaaaaacatatttaa 46414382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 48608336 - 48608300
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  48608336 aagttgacatatttatagggaccaaaaacatatttaa 48608300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 51949784 - 51949851
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||| |||||||| ||||| ||||  ||||||| ||||||||||| |||||||||||||||||    
T  51949784 tgaagaaatattttagagggattaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 51949851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 53594400 - 53594333
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  53594400 tgaagaaattttttagagagactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 53594333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 395
Target Start/End: Original strand, 41544420 - 41544486
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatattta 395  Q
    |||||||||||||||||| ||||| ||||  ||||||  ||||||||||| ||||||||||||||||    
T  41544420 tgaagaaattttttagagggattaaaacgaaaagttggtatatttataggcaccaaaaacatattta 41544486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 1631279 - 1631340
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||||||    
T  1631279 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaatcct 1631340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 51444816 - 51444873
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| ||||||||||| |||||||||||||||||    
T  51444816 ttttagagggattaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 51444873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 54239417 - 54239381
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||||||||||||||||||    
T  54239417 aagttgacatatttataggaaccaaaaacatatttaa 54239381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 54239840 - 54239876
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||||||||||||||||||    
T  54239840 aagttgacatatttataggaaccaaaaacatatttaa 54239876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 6135021 - 6135088
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| ||||| ||||  ||||||  ||||||||||| | |||||| ||||||||    
T  6135021 tgaagaaattttttagagggattaaaacgaaaagttggtatatttatagggatcaaaaatatatttaa 6135088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 8151103 - 8151170
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||| ||||||||||||| || || ||||  ||||||| |||||||||| || |||||||||||||||    
T  8151103 tgaataaattttttagagggactaaaacgaaaagttgatatatttatagaaatcaaaaacatatttaa 8151170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 8399329 - 8399396
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||  |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  8399329 tgaagaaaaattttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 8399396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 28482635 - 28482568
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || |||   ||||||| ||||||||||| || ||||||||||||||    
T  28482635 tgaagaaattttttagagggactaaaacaaaaagttgacatatttatagggacaaaaaacatatttaa 28482568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 28511447 - 28511380
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || |||   ||||||| ||||||||||| || ||||||||||||||    
T  28511447 tgaagaaattttttagagggactaaaacaaaaagttgacatatttatagggacaaaaaacatatttaa 28511380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 36181453 - 36181386
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||| || |||||||||  |||| ||||  ||||||| ||||||||||| |||||||||||||||||    
T  36181453 tgaaggaaatttttagaggaattaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 36181386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 6471413 - 6471470
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  6471413 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 6471470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 7922876 - 7922819
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| ||||||||||| || ||||||||||||||    
T  7922876 ttttagagggattaaaacgaaaagttgatatatttatagggacaaaaaacatatttaa 7922819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 396
Target Start/End: Original strand, 16301257 - 16301322
Alignment:
Q  331 aagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||| || || ||||  ||||||| ||||||||||  || ||||||||||||||    
T  16301257 aagaaattttttagagggactaaaacgaaaagttgacatatttatagagactaaaaacatatttaa 16301322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 20043840 - 20043897
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  20043840 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 20043897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 21863748 - 21863691
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  |||||| |||||||||||| |||||||||||||||||    
T  21863748 ttttagagggactaaaacgaaaagttggaatatttatagggaccaaaaacatatttaa 21863691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 25656802 - 25656859
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  25656802 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 25656859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 26859757 - 26859814
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||| || ||||| ||||  ||||||| ||||||||||| |||||||||||||||||    
T  26859757 ttttaaagagattaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 26859814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 27018253 - 27018310
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| |||||||||||||||||||| ||||||||    
T  27018253 ttttagagggactaaaacgaaaagttgatatatttataggaaccaaaaatatatttaa 27018310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 31184956 - 31185013
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  |||||   |||||||||||||||||||||||||||||    
T  31184956 ttttagagggattaaaacgaaaagttagtatatttataggaaccaaaaacatatttaa 31185013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 31752488 - 31752545
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| ||||||||||| ||| |||||||||||||    
T  31752488 ttttagagggattaaaacgaaaagttgacatatttatagggacctaaaacatatttaa 31752545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 32596967 - 32596910
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  32596967 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 32596910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 33898551 - 33898518
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||| |||||||||||||||||    
T  33898551 ttgaaatatttatagggaccaaaaacatatttaa 33898518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 400
Target Start/End: Original strand, 38174294 - 38174323
Alignment:
Q  371 tttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||||||||||||||||||||||    
T  38174294 tttataggaaccaaaaacatatttaatcct 38174323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 42373737 - 42373798
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    |||||||| ||||| |||   ||||||| ||||||||||| | |||||||||||||||||||    
T  42373737 ttttagagggattaaaacaaaaagttgacatatttatagggatcaaaaacatatttaatcct 42373798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 43545365 - 43545406
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcctg 401  Q
    ||||||| |||||||||||||| |||||||||||||| ||||    
T  43545365 aagttgatatatttataggaactaaaaacatatttaaccctg 43545406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 50743400 - 50743457
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  50743400 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 50743457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 52718436 - 52718379
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  52718436 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 52718379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 52718815 - 52718872
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  52718815 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 52718872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 54279560 - 54279503
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| |||   ||||||| ||||||||||| |||||||||||||||||    
T  54279560 ttttagagggattaaaacaaaaagttgatatatttatagggaccaaaaacatatttaa 54279503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 22607138 - 22607102
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  22607138 aagttgacatatttatagggaccaaaaacatatttaa 22607102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 26324667 - 26324699
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||| |||||||||||||||||||||    
T  26324667 atatttatagggaccaaaaacatatttaatcct 26324699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 26704170 - 26704206
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  26704170 aagttgacatatttatagggaccaaaaacatatttaa 26704206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 27107895 - 27107931
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  27107895 aagttgatatatttatagggaccaaaaacatatttaa 27107931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 27659219 - 27659255
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  27659219 aagttgatatatttatagggaccaaaaacatatttaa 27659255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 28588902 - 28588938
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  28588902 aagttgatatatttatagggaccaaaaacatatttaa 28588938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 30640915 - 30640951
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  30640915 aagttgacatatttatagggaccaaaaacatatttaa 30640951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 34661503 - 34661475
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  34661503 atatttataggaaccaaaaacatatttaa 34661475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 35460508 - 35460544
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  35460508 aagttgatatatttataggaaccaaaaacgtatttaa 35460544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 42163512 - 42163452
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcc 399  Q
    |||||||| ||||| ||||  ||||||| |||||| || | ||||||||||||||||||||    
T  42163512 ttttagagggattaaaacgaaaagttgatatatttgtaaggaccaaaaacatatttaatcc 42163452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 43081166 - 43081138
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  43081166 atatttataggaaccaaaaacatatttaa 43081138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 43630678 - 43630714
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  43630678 aagttgatatatttatagggaccaaaaacatatttaa 43630714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 46710272 - 46710236
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  46710272 aagttgacatatttatagggaccaaaaacatatttaa 46710236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 47757251 - 47757215
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  47757251 aagttgatatatttataggaaccaaaatcatatttaa 47757215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 54617390 - 54617354
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  54617390 aagttgacatatttatagggaccaaaaacatatttaa 54617354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 30440505 - 30440572
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||| | |||||||||||||||||||||||||||||    
T  30440505 tgaagaaattttttagagggactaaaacgaaaagttaacatatttataggaaccaaaaacatatttaa 30440572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 399
Target Start/End: Original strand, 1607906 - 1607976
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcc 399  Q
    |||||||||||||||||| ||||| || |  ||||||| ||||||||||  ||||||||||||||||||||    
T  1607906 tgaagaaattttttagagagattaaaatgaaaagttgacatatttatagtgaccaaaaacatatttaatcc 1607976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 8887438 - 8887372
Alignment:
Q  330 gaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  8887438 gaagaaattttttagagagactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 8887372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 18104718 - 18104785
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || |||   ||||||| ||||||||||| |||||||||||||||||    
T  18104718 tgaagaaattttttagagggactaaaacaaaaagttgatatatttatagggaccaaaaacatatttaa 18104785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 28868439 - 28868506
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| | ||||||||| |||||||||||||||||    
T  28868439 tgaagaaattttttagagggactaaaacgaaaagttgatacatttatagggaccaaaaacatatttaa 28868506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 33170344 - 33170383
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcc 399  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  33170344 aagttgatatatttataggaaccaaaaacatatttaatcc 33170383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 37232783 - 37232850
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||| ||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  37232783 tgaagaaattttttggagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 37232850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 14292640 - 14292697
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| |||||||||||||||||||||||||||||    
T  14292640 ttttagagggactaaaacgaaaagttgacatatttataggaaccaaaaacatatttaa 14292697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 396
Target Start/End: Original strand, 17610716 - 17610753
Alignment:
Q  359 taagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  17610716 taagttgaaatatttataggaaccaaaaatatatttaa 17610753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 46947557 - 46947497
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcc 399  Q
    |||||||| || || ||||  ||||||| ||||||||||| ||||||||||||||||||||    
T  46947557 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaatcc 46947497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 7534376 - 7534443
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||| ||||||||||| ||||| ||||  ||||||| ||||||| ||| || ||||||||||||||    
T  7534376 tgaagagattttttagagggattaaaacgaaaagttgatatatttagagggacgaaaaacatatttaa 7534443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 33524250 - 33524317
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||||||| || || || |  ||||||| ||||||||||| |||||||||||||||||    
T  33524250 tgaagaaaatttttagagggactaaaatgaaaagttgacatatttatagggaccaaaaacatatttaa 33524317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 33826386 - 33826453
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| ||||| ||||  |||||   ||||||||||| |||||||||| ||||||    
T  33826386 tgaagaaattttttagagagattaaaacgaaaagtttgtatatttatagggaccaaaaacaaatttaa 33826453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 33841578 - 33841511
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| ||||| ||||  |||||   ||||||||||| |||||||||| ||||||    
T  33841578 tgaagaaattttttagagagattaaaacgaaaagtttgtatatttatagggaccaaaaacaaatttaa 33841511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 41090103 - 41090036
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||   |||||| ||||||||||| || ||||||||||||||    
T  41090103 tgaagaaattttttagagggactaaaacgaatagttgatatatttatagggactaaaaacatatttaa 41090036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 2969744 - 2969687
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  2969744 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 2969687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 3336647 - 3336704
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||||||||  || |||| ||||||||||| | |||||||||||||||    
T  3336647 ttttagagggattagaacgaaaacttgatatatttatagggatcaaaaacatatttaa 3336704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 396
Target Start/End: Complemental strand, 7534070 - 7534000
Alignment:
Q  324 gaaagtgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||| ||||||||||||||||||  | || ||||  || |||| ||||||||||| |||||||||||||||||    
T  7534070 gaaattgaagaaattttttagag--actaaaacgaaaaattgacatatttataggtaccaaaaacatatttaa 7534000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 9472131 - 9472074
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  9472131 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 9472074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 9472499 - 9472556
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  9472499 ttttagagagactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 9472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 9840408 - 9840465
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  9840408 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 9840465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 11192702 - 11192759
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  11192702 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 11192759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 15369058 - 15369001
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  15369058 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 15369001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 16069917 - 16069860
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  16069917 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 16069860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 17338408 - 17338465
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  17338408 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 17338465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 17935157 - 17935214
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  17935157 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 17935214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 24026235 - 24026178
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  24026235 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 24026178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 27266048 - 27266105
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| ||||||||||| |||| ||||||||||||    
T  27266048 ttttagagggattaaaacgaaaagttgacatatttatagggaccataaacatatttaa 27266105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 28334953 - 28335010
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||  |||||||||||||||||||||||||||||    
T  28334953 ttttagagggactaaaacgaaaagttggtatatttataggaaccaaaaacatatttaa 28335010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 30633483 - 30633540
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  30633483 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 30633540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 35673069 - 35673036
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||| |||||||||||||||||    
T  35673069 ttgaaatatttatagggaccaaaaacatatttaa 35673036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 36042761 - 36042818
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| |||||||||||||| ||||||||||||||    
T  36042761 ttttagagggactaaaacgaaaagttgacatatttataggaactaaaaacatatttaa 36042818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 38213148 - 38213091
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  38213148 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 38213091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 41411509 - 41411452
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  41411509 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 41411452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 43485950 - 43485917
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||| |||||||||||||||||||||||||||||    
T  43485950 ttgagatatttataggaaccaaaaacatatttaa 43485917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 43638991 - 43638934
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  43638991 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 43638934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 47843939 - 47843882
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  47843939 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 47843882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 48689117 - 48689060
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  48689117 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 48689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 48689496 - 48689553
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  48689496 ttttagagggaataaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 48689553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 49580355 - 49580412
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  49580355 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 49580412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 3792948 - 3792912
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  3792948 aagttgacatatttatagggaccaaaaacatatttaa 3792912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 11192302 - 11192266
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  11192302 aagttgacatatttatagggaccaaaaacatatttaa 11192266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 12015252 - 12015288
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  12015252 aagtttaaatatttatagggaccaaaaacatatttaa 12015288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 13565991 - 13565955
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  13565991 aagttgatatatttataggaacaaaaaacatatttaa 13565955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 19893716 - 19893680
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  19893716 aagttgacatatttatagggaccaaaaacatatttaa 19893680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 21248919 - 21248891
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  21248919 atatttataggaaccaaaaacatatttaa 21248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 26073322 - 26073286
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  26073322 aagttgacatatttatagggaccaaaaacatatttaa 26073286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 26073743 - 26073779
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  26073743 aagttgacatatttatagggaccaaaaacatatttaa 26073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 30280881 - 30280917
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  30280881 aagttgacatatttatagggaccaaaaacatatttaa 30280917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 30633083 - 30633047
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  30633083 aagttgatatatttataggaaacaaaaacatatttaa 30633047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 30926483 - 30926519
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  30926483 aagttgacatatttatagggaccaaaaacatatttaa 30926519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 31683318 - 31683354
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  31683318 aagttgacatatttatagggaccaaaaacatatttaa 31683354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 32825195 - 32825231
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||  ||||||||||||||    
T  32825195 aagttgaaatatttataggaattaaaaacatatttaa 32825231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 35152857 - 35152821
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaatcc 399  Q
    |||| |||||||||||||||||||||||| |||||||    
T  35152857 ttgacatatttataggaaccaaaaacataattaatcc 35152821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 37232392 - 37232356
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  37232392 aagttgacatatttatagggaccaaaaacatatttaa 37232356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 400
Target Start/End: Original strand, 37950004 - 37950032
Alignment:
Q  372 ttataggaaccaaaaacatatttaatcct 400  Q
    |||||||||||||||||||||||||||||    
T  37950004 ttataggaaccaaaaacatatttaatcct 37950032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 38163404 - 38163368
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  38163404 aagttgatatatttatagggaccaaaaacatatttaa 38163368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 39757831 - 39757867
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  39757831 aagttgacatatttatagggaccaaaaacatatttaa 39757867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 39763185 - 39763221
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  39763185 aagttgacatatttatagggaccaaaaacatatttaa 39763221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 41411909 - 41411945
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  41411909 aagttgacatatttatagggaccaaaaacatatttaa 41411945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 396
Target Start/End: Complemental strand, 32347780 - 32347715
Alignment:
Q  331 aagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||| ||||| || |  ||||||| ||||||||||| |||||||||||||||||    
T  32347780 aagaaattttttagagggattaaaatgaaaagttgacatatttatagggaccaaaaacatatttaa 32347715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 13324520 - 13324587
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||| || || |||||||  ||||||| ||||||||||  |||||||||||||||||    
T  13324520 tgaagaaattttttaaagggactagaacgaaaagttgacatatttatagagaccaaaaacatatttaa 13324587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 39007677 - 39007606
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    |||||||||||||||||| || || |||   ||||| | ||||||||||| |||||||||||||||||||||    
T  39007677 tgaagaaattttttagagggactaaaacaaaaagttaacatatttatagggaccaaaaacatatttaatcct 39007606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 6532475 - 6532532
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| |||||||||||||||||||||||||||||    
T  6532475 ttttagagggactaaaacgaaaagttgatatatttataggaaccaaaaacatatttaa 6532532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 12068112 - 12068180
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaa-gttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  || ||||| ||||||||||| |||||||||||||||||    
T  12068112 tgaagaaattttttagagggactaaaacgaaaaagttgacatatttatagggaccaaaaacatatttaa 12068180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 26968260 - 26968327
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||| ||| |||||||||| ||||||    
T  26968260 tgaagaaattttttagagggactaaaacgaaaagttgacatatttacagggaccaaaaacacatttaa 26968327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 32753512 - 32753453
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatc 398  Q
    |||||||| || |||||||  ||||||| ||||||||||| || ||||||||||||||||    
T  32753512 ttttagagggactagaacgaaaagttgacatatttatagggactaaaaacatatttaatc 32753453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 40443532 - 40443465
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||||  | || || |  ||||||| ||||||||||| |||||||||||||||||    
T  40443532 tgaagaaattttttagaggaactaaaatgaaaagttgacatatttatagggaccaaaaacatatttaa 40443465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 40957578 - 40957511
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||  |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  40957578 tgaagaaaaattttagagagactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 40957511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 410
Target Start/End: Complemental strand, 32901497 - 32901455
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcctgttctttttt 410  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||    
T  32901497 atatttatagggaccaaaaacatatttaacccttttctttttt 32901455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 6732151 - 6732208
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||| | ||||||||||| |||||||||||||||||    
T  6732151 ttttagagggattaaaacgaaaagttaacatatttatagggaccaaaaacatatttaa 6732208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 12603118 - 12603175
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  12603118 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 12603175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 14391305 - 14391362
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  14391305 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 14391362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Original strand, 22083503 - 22083536
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||| |||||||||||||||||||||||||||||    
T  22083503 ttgatatatttataggaaccaaaaacatatttaa 22083536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 27251973 - 27252030
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  27251973 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 27252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 31838201 - 31838144
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  31838201 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 31838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 31838576 - 31838633
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  31838576 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 31838633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 35808671 - 35808728
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  35808671 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 35808728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 38305936 - 38305993
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  38305936 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 38305993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 394
Target Start/End: Complemental strand, 39146427 - 39146362
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatattt 394  Q
    |||||||||||||||||| ||||| |||   ||||||| ||||||||||  | |||||||||||||    
T  39146427 tgaagaaattttttagagggattaaaacaaaaagttgacatatttatagagatcaaaaacatattt 39146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 5192278 - 5192314
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  5192278 aagttgatatatttatagggaccaaaaacatatttaa 5192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 9437490 - 9437526
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  9437490 aagttgatatatttatagggaccaaaaacatatttaa 9437526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 10187555 - 10187519
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  10187555 aagttgacatatttatagggaccaaaaacatatttaa 10187519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 12602717 - 12602681
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  12602717 aagttgacatatttatagggaccaaaaacatatttaa 12602681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 28720770 - 28720806
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  28720770 aagttgacatatttatagggaccaaaaacatatttaa 28720806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 35808270 - 35808234
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  35808270 aagttgacatatttatagggaccaaaaacatatttaa 35808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 36072844 - 36072808
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  36072844 aagttgacatatttatagggaccaaaaacatatttaa 36072808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 36741478 - 36741442
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  36741478 aagttgacatatttataggaactaaaaacatatttaa 36741442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 38203959 - 38203995
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  38203959 aagttgacatatttatagggaccaaaaacatatttaa 38203995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 39120551 - 39120587
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  39120551 aagttgacatatttatagggaccaaaaacatatttaa 39120587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 40504709 - 40504645
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatt 393  Q
    ||||||||||||||||||  | || || |  ||||||| ||||||||||| ||||||||||||||    
T  40504709 tgaagaaattttttagaggaactaaaatgaaaagttgacatatttatagggaccaaaaacatatt 40504645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 41766823 - 41766783
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||| |||||| |||| |||||||||||||||||||||    
T  41766823 aagttgatatatttgtagggaccaaaaacatatttaatcct 41766783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 45133795 - 45133759
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  45133795 aagttgatatatttatagggaccaaaaacatatttaa 45133759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 411
Target Start/End: Complemental strand, 32065002 - 32064930
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcctgttctttttta 411  Q
    |||||||| || || ||||  ||||||| ||||||||||| ||||||||||||||||||||| || |||||||    
T  32065002 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaatcctattttttttta 32064930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 10596632 - 10596699
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| ||||| ||||  ||||||| ||||||||||| | ||||||||| |||||    
T  10596632 tgaagaaattttttagagggattaaaacgaaaagttgacatatttatagggatcaaaaacatttttaa 10596699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 26402974 - 26403041
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  26402974 tgaagaaaatttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 26403041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 8646813 - 8646747
Alignment:
Q  330 gaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||| || || ||||  ||||||| ||||||||||| | |||||||||||||||    
T  8646813 gaagaaattttttagagggactaaaacgaaaagttgacatatttataggtatcaaaaacatatttaa 8646747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 33894665 - 33894731
Alignment:
Q  330 gaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||| || || |||   ||||||| |||||||||||||||||||||||||||||    
T  33894665 gaagaaaatttttagagagactaaaacaaaaagttgatatatttataggaaccaaaaacatatttaa 33894731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 4178121 - 4178085
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||| |||||||||||||||||||    
T  4178121 aagttgaaatatttataagaaccaaaaacatatttaa 4178085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 20961768 - 20961804
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||||||||||||||||||    
T  20961768 aagttgacatatttataggaaccaaaaacatatttaa 20961804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 37978640 - 37978707
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||||||| ||||| ||||  ||||||  |||||||| || |||||||||||||||||    
T  37978640 tgaagaaaatttttagagggattaaaacgaaaagttggtatatttattgggaccaaaaacatatttaa 37978707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 39729328 - 39729395
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||| || ||||||||| || || ||||  |||||| ||||||||||||||||||||| ||||||||    
T  39729328 tgaaggaaatttttagagggactaaaacgaaaagttggaatatttataggaaccaaaaatatatttaa 39729395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 1008014 - 1008071
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  1008014 ttttagagagactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 1008071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 3850826 - 3850769
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||| ||||||||||||| |||||||||||||||||    
T  3850826 ttttagagggactaaaacgaaaagttaaaatatttatagggaccaaaaacatatttaa 3850769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 4843148 - 4843091
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  4843148 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 4843091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 4843512 - 4843569
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  4843512 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 4843569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 8105630 - 8105687
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| |||||||||||  ||||||||||||||||    
T  8105630 ttttagagggattaaaacgaaaagttgatatatttataggggccaaaaacatatttaa 8105687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 8596965 - 8597022
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  8596965 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 8597022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 18907571 - 18907514
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  18907571 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 18907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 23098319 - 23098376
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  23098319 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 23098376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 26910513 - 26910456
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  26910513 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 26910456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 28137435 - 28137378
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  28137435 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 28137378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 31124572 - 31124515
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  31124572 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 31124515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 400
Target Start/End: Complemental strand, 36254974 - 36254913
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||| ||||||||||||    
T  36254974 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaagatatttaatcct 36254913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 39026107 - 39026164
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  39026107 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 39026164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 39412829 - 39412772
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  39412829 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 39412772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 40975583 - 40975526
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||| |||||||||||||||||||||    
T  40975583 ttttagagggactaaaacgaaaagttgatatatttacaggaaccaaaaacatatttaa 40975526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 41044932 - 41044989
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  41044932 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 41044989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 43390937 - 43390994
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  || |||| ||||||||||| |||||||||||||||||    
T  43390937 ttttagagggattaaaacgaaaaattgatatatttatagggaccaaaaacatatttaa 43390994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 43447396 - 43447453
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  43447396 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 43447453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 2394094 - 2394126
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||| |||||||||||||||||||||    
T  2394094 atatttatagggaccaaaaacatatttaatcct 2394126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 4000965 - 4001001
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  4000965 aagttgatatatttatagggaccaaaaacatatttaa 4001001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 6987584 - 6987548
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  6987584 aagttgacatatttatagggaccaaaaacatatttaa 6987548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 7001746 - 7001710
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  7001746 aagttgacatatttatagggaccaaaaacatatttaa 7001710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 7274970 - 7274934
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  7274970 aagttgacatatttatagggaccaaaaacatatttaa 7274934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 7483608 - 7483644
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  7483608 aagttgatatatttataggaactaaaaacatatttaa 7483644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 13955356 - 13955317
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  13955356 aagttgatatatttatagga-ccaaaaacatatttaatcct 13955317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 13955759 - 13955795
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||||| || ||||||||||||||    
T  13955759 aagttgaaatatttatagggactaaaaacatatttaa 13955795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 14478550 - 14478590
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  14478550 aagttgatatatttatagtgaccaaaaacatatttaatcct 14478590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 19104363 - 19104391
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  19104363 atatttataggaaccaaaaacatatttaa 19104391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 21063873 - 21063938
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||||  | || ||||  ||||||| ||||||||||  |||||||||||||||||    
T  21063873 tgaagaaattttttagag--actaaaacgaaaagttgacatatttatagtgaccaaaaacatatttaa 21063938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 26338892 - 26338856
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  26338892 aagttgacatatttatagggaccaaaaacatatttaa 26338856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 32065401 - 32065437
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  32065401 aagttgacatatttataggaatcaaaaacatatttaa 32065437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 34448723 - 34448687
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  34448723 aagttgacatatttatagggaccaaaaacatatttaa 34448687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 34728969 - 34729005
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  34728969 aagttgacatatttatagggaccaaaaacatatttaa 34729005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 37250286 - 37250318
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||| |||||||||||||||||||||    
T  37250286 atatttatagggaccaaaaacatatttaatcct 37250318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 38308582 - 38308546
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  38308582 aagttgacatatttatagggaccaaaaacatatttaa 38308546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 39741343 - 39741379
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  39741343 aagttgatatatttatagggaccaaaaacatatttaa 39741379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 40360774 - 40360802
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  40360774 atatttataggaaccaaaaacatatttaa 40360802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 41960446 - 41960482
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  41960446 aagttgacatatttatagggaccaaaaacatatttaa 41960482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 42661793 - 42661829
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  42661793 aagttgacatatttatagggaccaaaaacatatttaa 42661829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 43211836 - 43211872
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  43211836 aagttgacatatttatagggaccaaaaacatatttaa 43211872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 43401214 - 43401178
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  43401214 aagttgacatatttatagggaccaaaaacatatttaa 43401178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 43446996 - 43446960
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  43446996 aagttgacatatttatagggaccaaaaacatatttaa 43446960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 43515016 - 43515052
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  43515016 aagttgatatatttatagggaccaaaaacatatttaa 43515052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 11097065 - 11097132
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||||||| |||||||| ||||||||    
T  11097065 tgaagaaattttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaatatatttaa 11097132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 40668866 - 40668924
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaat 397  Q
    |||||||| || || ||||  ||||||| ||||||||||||||||||||||||||||||    
T  40668866 ttttagagggactaaaacgaaaagttgacatatttataggaaccaaaaacatatttaat 40668924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 396
Target Start/End: Original strand, 5325093 - 5325158
Alignment:
Q  331 aagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||| ||||||||| ||||| ||||  ||||||| ||||||||| |||| ||||||||||||||    
T  5325093 aagaaaatttttagagggattaaaacgaaaagttgatatatttataagaactaaaaacatatttaa 5325158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 27343328 - 27343271
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| |||||  ||| |||||||| ||||||||||| |||||||||||||||||    
T  27343328 ttttagagggattaatacgataagttgacatatttatagggaccaaaaacatatttaa 27343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 1173177 - 1173217
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  1173177 aagttgatatatttatagggaccaaaaacatatttaatcct 1173217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 2938136 - 2938068
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaa-gttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  || ||||| ||||||||||||| |||||||||||||||    
T  2938136 tgaagaaattttttagagggaataaaacgaaaaagttgacatatttataggaatcaaaaacatatttaa 2938068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 2828569 - 2828502
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||| || || || ||||  || |||| ||||||||||| |||||||||||||||||    
T  2828569 tgaagaaattttttaaagggactaaaacgaaaacttgatatatttatagggaccaaaaacatatttaa 2828502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 5728751 - 5728684
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||| || || || ||||  ||||||| ||||||||||| | |||||||||||||||    
T  5728751 tgaagaaattttttaaagggactaaaacgaaaagttgatatatttatagggatcaaaaacatatttaa 5728684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 35575315 - 35575382
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||  |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  35575315 tgaagaaaaattttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 35575382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 35778289 - 35778223
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||| ||| || |||   ||||||| ||||||||||| |||||||||||||||||    
T  35778289 tgaagaaattttttagaacgactaaaacaaaaagttgacatatttatagg-accaaaaacatatttaa 35778223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 37828657 - 37828720
Alignment:
Q  333 gaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||  ||||| || |  ||||||  |||||||||||||||||||||||||||||    
T  37828657 gaaattttttagaatgattaaaatgaaaagttggtatatttataggaaccaaaaacatatttaa 37828720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 42149806 - 42149873
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||||||  || ||||||||||||||    
T  42149806 tgaagaaattttttagagagactaaaacgaaaagttgacatatttatagagactaaaaacatatttaa 42149873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 396
Target Start/End: Original strand, 9376188 - 9376222
Alignment:
Q  362 gttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||| |||||||||||||||||||||||||||||    
T  9376188 gttgacatatttataggaaccaaaaacatatttaa 9376222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 42026266 - 42026316
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcctgttctttttt 410  Q
    ||||||| ||||||||||| ||||||||||||||||| ||| || ||||||    
T  42026266 aagttgacatatttatagggaccaaaaacatatttaacccttttttttttt 42026316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 109455 - 109398
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  109455 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 109398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 2659825 - 2659776
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcctgttcttttt 409  Q
    ||||||| ||||||||| | ||||||||||||||||||||| || |||||    
T  2659825 aagttgacatatttataaggaccaaaaacatatttaatcctttttttttt 2659776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 3612776 - 3612719
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  3612776 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 3612719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 5110456 - 5110399
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  5110456 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 5110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 409
Target Start/End: Original strand, 8525754 - 8525795
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcctgttcttttt 409  Q
    ||||||||||||||||||||||||||||| ||| || |||||    
T  8525754 atatttataggaaccaaaaacatatttaacccttttattttt 8525795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 9375799 - 9375742
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  9375799 ttttagagggactaaaacgtaaagttgacatatttatagggaccaaaaacatatttaa 9375742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 14092547 - 14092490
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  14092547 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 14092490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 16975714 - 16975657
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||| | ||||||||||| |||||||||||||||||    
T  16975714 ttttagagggattaaaacgaaaagttaatatatttatagggaccaaaaacatatttaa 16975657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 18150360 - 18150303
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  18150360 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 18150303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 18150741 - 18150798
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  ||||||| ||||||||||| || ||||||||||||||    
T  18150741 ttttagagggattaaaacgaaaagttgacatatttatagggactaaaaacatatttaa 18150798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 23769876 - 23769933
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  23769876 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 23769933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 25099738 - 25099709
Alignment:
Q  367 aatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||||||||||||||||||    
T  25099738 aatatttataggaaccaaaaacatatttaa 25099709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 26151548 - 26151604
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||| || |||| ||||||||||| |||||||||||||||||    
T  26151548 ttttagagggatta-aacggaaatttgatatatttatagggaccaaaaacatatttaa 26151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 29266869 - 29266926
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  29266869 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 29266926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 32800183 - 32800240
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  32800183 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 32800240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 34414935 - 34414992
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  34414935 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 34414992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 34793213 - 34793266
Alignment:
Q  343 agagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||| ||||| ||||  ||||||| ||||||||||| |||||||||||||||||    
T  34793213 agagggattaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 34793266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 36091335 - 36091278
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  36091335 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 36091278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 36310919 - 36310976
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  36310919 ttttagagggagtaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 36310976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 36844383 - 36844326
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| ||||| ||||  || |||| ||||||||||| |||||||||||||||||    
T  36844383 ttttagagggattaaaacgaaaaattgacatatttatagggaccaaaaacatatttaa 36844326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 36844763 - 36844820
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  36844763 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 36844820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 38508555 - 38508612
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  38508555 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 38508612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 411
Target Start/End: Original strand, 4052964 - 4053036
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcctgttctttttta 411  Q
    |||||||| || || ||||  ||||||  ||||||||||| ||||||||||||||||| | |||| |||||||    
T  4052964 ttttagagggactaaaacgaaaagttggtatatttatagggaccaaaaacatatttaaccttgttttttttta 4053036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 4418700 - 4418660
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||| ||||||||||| | |||||||||||||||||||    
T  4418700 aagttgacatatttatagggatcaaaaacatatttaatcct 4418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 5109605 - 5109569
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  5109605 aagttgacatatttataggtaccaaaaacatatttaa 5109569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 6078963 - 6078927
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  6078963 aagttgacatatttatagggaccaaaaacatatttaa 6078927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 6082893 - 6082857
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  6082893 aagttgacatatttatagggaccaaaaacatatttaa 6082857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 8841775 - 8841739
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  8841775 aagttgacatatttatagggaccaaaaacatatttaa 8841739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 12179328 - 12179292
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  12179328 aagttgatatatttatagggaccaaaaacatatttaa 12179292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 12423756 - 12423720
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  12423756 aagttgatatatttatagggaccaaaaacatatttaa 12423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 17950482 - 17950454
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  17950482 atatttataggaaccaaaaacatatttaa 17950454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 18173525 - 18173561
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  18173525 aagttgacatatttatagggaccaaaaacatatttaa 18173561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 18252509 - 18252473
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  18252509 aagttgacatatttatagggaccaaaaacatatttaa 18252473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 21134817 - 21134849
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||| |||||||||||||||||||||    
T  21134817 atatttatagggaccaaaaacatatttaatcct 21134849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 22274028 - 22273992
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  22274028 aagttgatatatttataggagccaaaaacatatttaa 22273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 23769476 - 23769440
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  23769476 aagttgatatatttataggaatcaaaaacatatttaa 23769440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 26063781 - 26063817
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  26063781 aagttgatatatttatagggaccaaaaacatatttaa 26063817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 26544296 - 26544332
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  26544296 aagttgatatatttatatgaaccaaaaacatatttaa 26544332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 32875243 - 32875207
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  32875243 aagttgacatatttataagaaccaaaaacatatttaa 32875207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 33316257 - 33316221
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  33316257 aagttgatatatttatagggaccaaaaacatatttaa 33316221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 34872996 - 34873024
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  34872996 atatttataggaaccaaaaacatatttaa 34873024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 37529373 - 37529337
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaatcc 399  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  37529373 ttgacatatttataggaatcaaaaacatatttaatcc 37529337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 38507809 - 38507773
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  38507809 aagttgacatatttatagggaccaaaaacatatttaa 38507773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 38508230 - 38508266
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  38508230 aagttgacatatttatagggaccaaaaacatatttaa 38508266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 42309898 - 42309934
Alignment:
Q  363 ttgaaatatttataggaaccaaaaacatatttaatcc 399  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  42309898 ttgatatatttatagggaccaaaaacatatttaatcc 42309934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 400
Target Start/End: Complemental strand, 45509659 - 45509627
Alignment:
Q  368 atatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||||||| |||||||||||||||||||||    
T  45509659 atatttatagggaccaaaaacatatttaatcct 45509627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Original strand, 9373399 - 9373466
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||| ||||| ||||  ||||||| ||||||||||| || ||| ||||||||||    
T  9373399 tgaagaaattttttagagggattaaaacgaaaagttgacatatttatagggactaaagacatatttaa 9373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 19059631 - 19059564
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||| |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  19059631 tgaagaaatattttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 19059564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 28663155 - 28663226
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcctgttctttttt 410  Q
    |||||||| || || ||||  ||||||| ||||||||||| ||||||||||||||||||||| || ||||||    
T  28663155 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaatccttttttttttt 28663226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 19682523 - 19682443
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaatcctgttcttttt 409  Q
    |||||||| ||||||||| || || ||||  || |||| ||||||||||| ||||||||||||||||| ||| || |||||    
T  19682523 tgaagaaaatttttagagggactaaaacgaaaaattgacatatttatagggaccaaaaacatatttaacccttttattttt 19682443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 33023561 - 33023494
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||| || ||||||||| ||||| ||||  ||||||| ||||||||||| || ||||||||||||||    
T  33023561 tgaaggaaatttttagagagattaaaacgaaaagttgatatatttatagggactaaaaacatatttaa 33023494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 1336594 - 1336537
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  1336594 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 1336537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 1336974 - 1337031
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  1336974 ttttagagggactataacgaaaagttgatatatttatagggaccaaaaacatatttaa 1337031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 4605623 - 4605566
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  4605623 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 4605566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 7268865 - 7268808
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||||| ||||||||| |||||||||||||||||    
T  7268865 ttttagagggactaaaacgaaaagttgaaaaatttatagggaccaaaaacatatttaa 7268808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 14190980 - 14191037
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  14190980 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 14191037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 26569827 - 26569770
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  26569827 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 26569770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Complemental strand, 35117174 - 35117117
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  35117174 ttttagagggactaaaacgaaaagttgatatatttatagggaccaaaaacatatttaa 35117117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 5039004 - 5038968
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  5039004 aagttgatatatttatagggaccaaaaacatatttaa 5038968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 7675857 - 7675885
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  7675857 atatttataggaaccaaaaacatatttaa 7675885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 8440135 - 8440099
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  8440135 aagttgatatatttatagggaccaaaaacatatttaa 8440099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 8677654 - 8677618
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  8677654 aagttgacatatttatagggaccaaaaacatatttaa 8677618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 396
Target Start/End: Complemental strand, 9463943 - 9463879
Alignment:
Q  332 agaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||||||||||| ||||| ||||  |||||   |||| |||| |||||||||||||||||||    
T  9463943 agaaattttttagagggattaaaacgaaaagttagtatatctataagaaccaaaaacatatttaa 9463879  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 10685929 - 10685893
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  10685929 aagttgacatatgtataggaaccaaaaacatatttaa 10685893  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 13648986 - 13649022
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  13648986 aagttgacatatttatagggaccaaaaacatatttaa 13649022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 22084171 - 22084135
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  22084171 aagttgacatatttatagggaccaaaaacatatttaa 22084135  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 22734541 - 22734569
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  22734541 atatttataggaaccaaaaacatatttaa 22734569  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 28580386 - 28580358
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  28580386 atatttataggaaccaaaaacatatttaa 28580358  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 34187821 - 34187785
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  34187821 aagttgatatatttataggaaccgaaaacatatttaa 34187785  T

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Target: scaffold0197 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 3855 - 3791
Alignment:
Q  331 aagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatattta 395  Q
    |||||||||||||||| || || ||||  ||||||| ||||||||||  ||||||||||||||||    
T  3855 aagaaattttttagagggactaaaacgaaaagttgacatatttatagagaccaaaaacatattta 3791  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 16626 - 16590
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| |||||||||||||||||||||||||||||    
T  16626 aagttgatatatttataggaaccaaaaacatatttaa 16590  T

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Target: scaffold0111 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 392
Target Start/End: Complemental strand, 40421 - 40358
Alignment:
Q  329 tgaagaaattttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatat 392  Q
    |||||||||||||||||| || || ||||  ||||||| ||||||||||| || ||||||||||    
T  40421 tgaagaaattttttagagggactaaaacgaaaagttgacatatttatagggacgaaaaacatat 40358  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 28521 - 28578
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  28521 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 28578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 28122 - 28086
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  28122 aagttgacatatttatagggaccaaaaacatatttaa 28086  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 65308 - 65365
Alignment:
Q  339 ttttagagcgattagaacggtaagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    |||||||| || || ||||  ||||||| ||||||||||| |||||||||||||||||    
T  65308 ttttagagggactaaaacgaaaagttgacatatttatagggaccaaaaacatatttaa 65365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Original strand, 7311 - 7339
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  7311 atatttataggaaccaaaaacatatttaa 7339  T

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Target: scaffold0182 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 18134 - 18170
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaa 396  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  18134 aagttgatatatttatagggaccaaaaacatatttaa 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 11300 - 11340
Alignment:
Q  360 aagttgaaatatttataggaaccaaaaacatatttaatcct 400  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  11300 aagttgatatatttatagtgaccaaaaacatatttaatcct 11340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 396
Target Start/End: Complemental strand, 22646 - 22618
Alignment:
Q  368 atatttataggaaccaaaaacatatttaa 396  Q
    |||||||||||||||||||||||||||||    
T  22646 atatttataggaaccaaaaacatatttaa 22618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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