View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11080_low_7 (Length: 421)

Name: NF11080_low_7
Description: NF11080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11080_low_7
NF11080_low_7
[»] chr7 (54 HSPs)
chr7 (235-406)||(20419535-20419706)
chr7 (236-406)||(23704869-23705038)
chr7 (236-406)||(25772364-25772533)
chr7 (235-405)||(38879722-38879893)
chr7 (236-406)||(20458692-20458861)
chr7 (236-406)||(12006541-12006710)
chr7 (237-406)||(44816832-44817005)
chr7 (236-406)||(10409582-10409751)
chr7 (234-406)||(23383497-23383670)
chr7 (236-378)||(28218178-28218321)
chr7 (235-406)||(41599957-41600128)
chr7 (268-396)||(24195014-24195142)
chr7 (236-406)||(20963494-20963665)
chr7 (236-378)||(12006776-12006918)
chr7 (236-378)||(28218399-28218541)
chr7 (236-378)||(41600194-41600336)
chr7 (237-407)||(48648263-48648432)
chr7 (236-406)||(48672277-48672449)
chr7 (235-378)||(16995199-16995341)
chr7 (236-378)||(48672515-48672657)
chr7 (237-406)||(31851242-31851409)
chr7 (232-379)||(6465851-6465997)
chr7 (240-379)||(1250441-1250580)
chr7 (236-406)||(33162743-33162914)
chr7 (155-235)||(45806799-45806879)
chr7 (239-406)||(7657972-7658140)
chr7 (236-351)||(23383763-23383878)
chr7 (236-351)||(23704662-23704776)
chr7 (235-351)||(20419799-20419916)
chr7 (159-235)||(31588338-31588412)
chr7 (233-379)||(38879959-38880102)
chr7 (236-351)||(20458954-20459068)
chr7 (236-351)||(25772594-25772709)
chr7 (236-348)||(20963760-20963871)
chr7 (303-396)||(1250273-1250366)
chr7 (235-288)||(24195198-24195251)
chr7 (237-292)||(7658287-7658342)
chr7 (238-379)||(48648464-48648603)
chr7 (314-354)||(20963651-20963691)
chr7 (236-287)||(31852157-31852208)
chr7 (305-347)||(31851506-31851548)
chr7 (15-73)||(45806981-45807039)
chr7 (307-379)||(7658204-7658276)
chr7 (302-350)||(10409440-10409488)
chr7 (236-292)||(14646972-14647028)
chr7 (307-351)||(44817098-44817142)
chr7 (241-292)||(23258246-23258297)
chr7 (223-292)||(6466127-6466195)
chr7 (259-292)||(14630359-14630392)
chr7 (314-354)||(20419692-20419732)
chr7 (314-354)||(20458847-20458887)
chr7 (314-354)||(25772519-25772559)
chr7 (236-292)||(33131633-33131689)
chr7 (314-354)||(44816991-44817031)
[»] chr5 (38 HSPs)
chr5 (236-406)||(24837169-24837339)
chr5 (236-406)||(4918989-4919160)
chr5 (235-398)||(23979117-23979280)
chr5 (237-406)||(993751-993917)
chr5 (234-406)||(31799638-31799810)
chr5 (236-406)||(17762490-17762660)
chr5 (236-406)||(6817123-6817292)
chr5 (236-406)||(14144109-14144279)
chr5 (241-406)||(7125923-7126087)
chr5 (235-406)||(18336664-18336834)
chr5 (236-406)||(14411874-14412043)
chr5 (250-406)||(41001370-41001523)
chr5 (238-406)||(24650704-24650870)
chr5 (236-406)||(29445014-29445183)
chr5 (236-406)||(30512288-30512458)
chr5 (236-406)||(30552628-30552798)
chr5 (231-379)||(14143897-14144044)
chr5 (236-379)||(24074303-24074446)
chr5 (267-406)||(24074510-24074649)
chr5 (236-379)||(7126152-7126295)
chr5 (236-406)||(20709206-20709382)
chr5 (236-379)||(14411697-14411840)
chr5 (236-406)||(27158991-27159158)
chr5 (236-379)||(17762283-17762425)
chr5 (234-379)||(29444804-29444949)
chr5 (236-351)||(24837432-24837547)
chr5 (237-351)||(41001616-41001729)
chr5 (236-341)||(20709485-20709589)
chr5 (240-379)||(31799875-31800013)
chr5 (241-379)||(27159192-27159327)
chr5 (236-379)||(24650934-24651077)
chr5 (249-363)||(22571090-22571204)
chr5 (235-351)||(18336466-18336583)
chr5 (235-351)||(994009-994124)
chr5 (237-292)||(4919311-4919366)
chr5 (303-347)||(6817388-6817432)
chr5 (236-354)||(41424516-41424634)
chr5 (304-341)||(28070532-28070569)
[»] chr3 (66 HSPs)
chr3 (236-406)||(9266975-9267145)
chr3 (236-406)||(19112764-19112935)
chr3 (236-406)||(16722199-16722369)
chr3 (236-406)||(35995678-35995848)
chr3 (236-406)||(49986736-49986906)
chr3 (235-406)||(14162079-14162249)
chr3 (235-406)||(5800813-5800983)
chr3 (236-406)||(20853695-20853866)
chr3 (236-406)||(30500043-30500211)
chr3 (236-406)||(14262036-14262206)
chr3 (236-406)||(21633104-21633274)
chr3 (151-235)||(12833629-12833713)
chr3 (236-406)||(45970123-45970294)
chr3 (236-406)||(14171587-14171756)
chr3 (236-406)||(45003704-45003873)
chr3 (234-406)||(4204707-4204878)
chr3 (236-379)||(14262271-14262414)
chr3 (236-406)||(17465367-17465538)
chr3 (236-378)||(14171822-14171964)
chr3 (236-406)||(33372614-33372782)
chr3 (234-379)||(5800603-5800748)
chr3 (236-406)||(43572599-43572768)
chr3 (237-379)||(52552923-52553065)
chr3 (234-379)||(14161869-14162014)
chr3 (1-78)||(12833479-12833556)
chr3 (236-379)||(20853931-20854073)
chr3 (236-379)||(30500276-30500418)
chr3 (302-406)||(52552758-52552862)
chr3 (236-350)||(16721991-16722105)
chr3 (236-378)||(33372406-33372548)
chr3 (235-336)||(19720332-19720433)
chr3 (236-348)||(11003732-11003844)
chr3 (236-406)||(15328668-15328839)
chr3 (236-347)||(45969915-45970026)
chr3 (303-406)||(38283758-38283861)
chr3 (159-235)||(38276316-38276390)
chr3 (236-351)||(19113028-19113143)
chr3 (236-351)||(43572389-43572504)
chr3 (302-406)||(47575339-47575442)
chr3 (235-351)||(45003495-45003611)
chr3 (236-347)||(49986527-49986639)
chr3 (236-292)||(9267296-9267352)
chr3 (236-292)||(27946187-27946243)
chr3 (151-235)||(7814472-7814548)
chr3 (236-292)||(35995997-35996053)
chr3 (241-292)||(27946114-27946165)
chr3 (239-379)||(38283553-38283693)
chr3 (236-351)||(21632901-21633011)
chr3 (233-379)||(15328460-15328603)
chr3 (236-289)||(3425973-3426026)
chr3 (239-339)||(17649285-17649384)
chr3 (236-292)||(3424774-3424830)
chr3 (236-284)||(17465697-17465745)
chr3 (236-292)||(35741906-35741962)
chr3 (236-291)||(24490242-24490297)
chr3 (235-352)||(35740816-35740931)
chr3 (15-73)||(7814666-7814724)
chr3 (248-352)||(36990922-36991025)
chr3 (248-352)||(37016362-37016465)
chr3 (302-367)||(45058738-45058803)
chr3 (249-292)||(46850507-46850550)
chr3 (314-354)||(9267131-9267171)
chr3 (314-354)||(21633078-21633118)
chr3 (310-354)||(35995834-35995878)
chr3 (310-354)||(38283728-38283772)
chr3 (236-292)||(47575593-47575649)
[»] scaffold0361 (2 HSPs)
scaffold0361 (236-406)||(4771-4940)
scaffold0361 (236-351)||(4562-4678)
[»] chr4 (60 HSPs)
chr4 (237-406)||(9516611-9516780)
chr4 (234-406)||(26252445-26252617)
chr4 (236-406)||(38573969-38574138)
chr4 (236-406)||(9619187-9619357)
chr4 (235-406)||(31090059-31090231)
chr4 (236-406)||(31944158-31944328)
chr4 (236-406)||(9396907-9397076)
chr4 (241-406)||(37012712-37012877)
chr4 (236-406)||(46046430-46046594)
chr4 (239-406)||(35376336-35376502)
chr4 (236-406)||(3018220-3018388)
chr4 (237-406)||(34063983-34064152)
chr4 (306-406)||(7819222-7819322)
chr4 (238-406)||(48259959-48260126)
chr4 (234-379)||(3018009-3018155)
chr4 (235-398)||(3273836-3273997)
chr4 (237-406)||(15640923-15641093)
chr4 (241-406)||(4356089-4356253)
chr4 (238-351)||(9618982-9619095)
chr4 (239-378)||(38574204-38574343)
chr4 (236-378)||(46046660-46046801)
chr4 (239-399)||(13131943-13132104)
chr4 (241-406)||(48579871-48580036)
chr4 (236-379)||(37012942-37013084)
chr4 (233-379)||(9396696-9396842)
chr4 (235-351)||(9516873-9516989)
chr4 (236-364)||(12904747-12904874)
chr4 (235-351)||(15640715-15640830)
chr4 (236-406)||(18667497-18667668)
chr4 (302-406)||(18713168-18713272)
chr4 (241-379)||(4355887-4356024)
chr4 (236-347)||(31943950-31944061)
chr4 (239-378)||(7819018-7819156)
chr4 (236-292)||(31218303-31218359)
chr4 (236-350)||(48259823-48259938)
chr4 (241-351)||(48580129-48580239)
chr4 (237-379)||(35376164-35376305)
chr4 (236-351)||(3273621-3273737)
chr4 (236-351)||(31090324-31090439)
chr4 (231-291)||(41946960-41947020)
chr4 (235-350)||(41947120-41947233)
chr4 (236-350)||(13132205-13132317)
chr4 (151-235)||(1242608-1242684)
chr4 (302-379)||(18713026-18713103)
chr4 (302-379)||(34064217-34064294)
chr4 (236-292)||(36887680-36887736)
chr4 (15-73)||(1242803-1242861)
chr4 (305-351)||(26252337-26252383)
chr4 (235-292)||(43313533-43313590)
chr4 (236-292)||(12904906-12904962)
chr4 (236-292)||(53896446-53896502)
chr4 (236-287)||(7819347-7819398)
chr4 (246-292)||(51029095-51029141)
chr4 (236-277)||(50462733-50462774)
chr4 (314-354)||(4356063-4356103)
chr4 (314-354)||(7819196-7819236)
chr4 (242-290)||(12520643-12520691)
chr4 (236-292)||(31082185-31082241)
chr4 (235-283)||(31083428-31083476)
chr4 (314-354)||(37012863-37012903)
[»] chr6 (31 HSPs)
chr6 (236-406)||(24732146-24732315)
chr6 (232-406)||(26385274-26385448)
chr6 (236-406)||(18500315-18500484)
chr6 (234-406)||(33714481-33714657)
chr6 (233-379)||(9481179-9481325)
chr6 (302-406)||(9481390-9481494)
chr6 (236-351)||(32017767-32017881)
chr6 (248-384)||(9854117-9854251)
chr6 (246-406)||(32017550-32017706)
chr6 (303-406)||(14680949-14681052)
chr6 (237-351)||(19284130-19284244)
chr6 (303-406)||(30618169-30618272)
chr6 (236-406)||(33637736-33637895)
chr6 (240-399)||(10321737-10321893)
chr6 (314-406)||(2299389-2299480)
chr6 (239-347)||(26385541-26385649)
chr6 (236-292)||(24731935-24731991)
chr6 (239-406)||(30458903-30459071)
chr6 (231-379)||(30617962-30618105)
chr6 (256-347)||(3230129-3230220)
chr6 (236-288)||(18500655-18500707)
chr6 (241-338)||(9154884-9154982)
chr6 (236-292)||(2299340-2299396)
chr6 (236-292)||(2299635-2299691)
chr6 (302-379)||(33637625-33637702)
chr6 (237-292)||(34884558-34884613)
chr6 (235-292)||(21069513-21069570)
chr6 (314-354)||(3230019-3230059)
chr6 (305-351)||(24732007-24732053)
chr6 (303-347)||(17142744-17142788)
chr6 (236-292)||(21070859-21070915)
[»] chr1 (54 HSPs)
chr1 (236-406)||(39711280-39711450)
chr1 (236-406)||(17606516-17606684)
chr1 (236-406)||(39826050-39826220)
chr1 (236-406)||(4906962-4907132)
chr1 (236-406)||(33628690-33628860)
chr1 (235-406)||(30299439-30299610)
chr1 (235-398)||(24467843-24468003)
chr1 (236-406)||(34749138-34749307)
chr1 (234-406)||(52058009-52058181)
chr1 (151-235)||(25549323-25549407)
chr1 (236-406)||(39970645-39970816)
chr1 (236-406)||(48072169-48072339)
chr1 (236-406)||(29696771-29696935)
chr1 (236-401)||(8293020-8293186)
chr1 (236-406)||(20995877-20996045)
chr1 (235-379)||(39711073-39711215)
chr1 (259-406)||(42510038-42510184)
chr1 (235-348)||(39826312-39826425)
chr1 (235-406)||(13229939-13230111)
chr1 (232-368)||(18342265-18342399)
chr1 (151-235)||(23198119-23198203)
chr1 (240-398)||(18462500-18462658)
chr1 (235-379)||(8292803-8292947)
chr1 (226-351)||(18462276-18462400)
chr1 (1-73)||(25549504-25549576)
chr1 (236-406)||(43539555-43539725)
chr1 (236-379)||(4907197-4907340)
chr1 (239-375)||(17606307-17606447)
chr1 (232-351)||(48071957-48072076)
chr1 (236-351)||(52058271-52058386)
chr1 (236-351)||(24467629-24467743)
chr1 (235-379)||(39970880-39971025)
chr1 (238-379)||(43539349-43539490)
chr1 (236-341)||(29696565-29696669)
chr1 (236-360)||(30252152-30252278)
chr1 (236-347)||(30299232-30299342)
chr1 (236-351)||(33628953-33629068)
chr1 (5-78)||(23197975-23198045)
chr1 (235-379)||(34749340-34749484)
chr1 (306-406)||(7473862-7473962)
chr1 (236-292)||(20995698-20995754)
chr1 (249-379)||(16294182-16294312)
chr1 (151-235)||(31774375-31774451)
chr1 (236-288)||(27039638-27039690)
chr1 (241-379)||(42510249-42510388)
chr1 (235-290)||(17502053-17502108)
chr1 (15-73)||(31774550-31774608)
chr1 (241-290)||(37236723-37236772)
chr1 (307-379)||(13229803-13229875)
chr1 (236-292)||(17500769-17500825)
chr1 (236-292)||(43400753-43400809)
chr1 (303-335)||(215191-215223)
chr1 (236-292)||(26271207-26271263)
chr1 (314-354)||(52058167-52058207)
[»] chr2 (52 HSPs)
chr2 (235-406)||(23806160-23806331)
chr2 (236-407)||(17463298-17463469)
chr2 (235-406)||(30390458-30390629)
chr2 (236-406)||(26236303-26236472)
chr2 (236-406)||(19251678-19251847)
chr2 (235-406)||(15106275-15106444)
chr2 (235-406)||(17850586-17850756)
chr2 (235-406)||(42670716-42670889)
chr2 (235-406)||(26136025-26136196)
chr2 (235-406)||(22263191-22263361)
chr2 (155-235)||(5599403-5599483)
chr2 (236-406)||(26560556-26560724)
chr2 (1-78)||(5599556-5599633)
chr2 (236-378)||(17850822-17850964)
chr2 (236-379)||(22263426-22263571)
chr2 (239-406)||(13254644-13254811)
chr2 (236-351)||(19251471-19251585)
chr2 (236-406)||(20498953-20499123)
chr2 (235-341)||(23854687-23854793)
chr2 (235-379)||(42670954-42671098)
chr2 (236-379)||(26236127-26236270)
chr2 (236-406)||(33290257-33290425)
chr2 (247-351)||(26135828-26135932)
chr2 (237-379)||(26560789-26560932)
chr2 (236-378)||(15106067-15106209)
chr2 (249-379)||(33290062-33290192)
chr2 (312-406)||(13284484-13284578)
chr2 (236-351)||(13254497-13254612)
chr2 (236-292)||(20498747-20498803)
chr2 (235-283)||(23855025-23855073)
chr2 (235-339)||(34548573-34548676)
chr2 (236-379)||(39878103-39878245)
chr2 (314-406)||(39878310-39878402)
chr2 (236-341)||(23046707-23046812)
chr2 (235-379)||(17463091-17463234)
chr2 (303-379)||(23854901-23854977)
chr2 (235-341)||(44098895-44099001)
chr2 (236-290)||(12419046-12419100)
chr2 (236-290)||(12431106-12431160)
chr2 (234-292)||(30958682-30958740)
chr2 (236-341)||(30959945-30960049)
chr2 (306-363)||(13284659-13284716)
chr2 (235-292)||(39878395-39878451)
chr2 (236-292)||(23047904-23047960)
chr2 (235-292)||(13284735-13284792)
chr2 (370-406)||(23854800-23854836)
chr2 (238-282)||(44999354-44999398)
chr2 (241-288)||(44999435-44999481)
chr2 (304-354)||(36359111-36359161)
chr2 (236-285)||(13284412-13284461)
chr2 (306-379)||(23806022-23806095)
chr2 (314-354)||(26236277-26236317)
[»] chr8 (46 HSPs)
chr8 (236-406)||(10108578-10108748)
chr8 (236-406)||(14820502-14820672)
chr8 (231-406)||(43851660-43851834)
chr8 (236-406)||(7689731-7689901)
chr8 (244-406)||(5555077-5555239)
chr8 (236-406)||(21147936-21148107)
chr8 (236-406)||(17622890-17623057)
chr8 (236-379)||(10108370-10108513)
chr8 (151-235)||(10628426-10628510)
chr8 (236-406)||(26136893-26137062)
chr8 (151-235)||(40637647-40637731)
chr8 (151-233)||(21119279-21119361)
chr8 (236-406)||(42605961-42606131)
chr8 (240-406)||(22494592-22494757)
chr8 (244-406)||(42112993-42113154)
chr8 (1-78)||(40637804-40637881)
chr8 (236-379)||(5554869-5555012)
chr8 (235-379)||(14820294-14820437)
chr8 (247-406)||(30789519-30789677)
chr8 (236-400)||(26532782-26532947)
chr8 (236-378)||(30789743-30789885)
chr8 (236-379)||(21148171-21148314)
chr8 (236-374)||(10171383-10171521)
chr8 (236-406)||(2583528-2583699)
chr8 (302-406)||(14767573-14767677)
chr8 (236-351)||(7689524-7689638)
chr8 (239-379)||(17623122-17623261)
chr8 (236-379)||(26136685-26136828)
chr8 (235-288)||(18044153-18044206)
chr8 (235-379)||(2583319-2583463)
chr8 (236-340)||(43481588-43481693)
chr8 (236-292)||(35367410-35367466)
chr8 (240-351)||(42605759-42605868)
chr8 (330-406)||(43481408-43481484)
chr8 (233-379)||(14767742-14767885)
chr8 (20-73)||(10628608-10628664)
chr8 (236-290)||(20877069-20877123)
chr8 (20-73)||(21119459-21119515)
chr8 (254-379)||(21144740-21144865)
chr8 (236-292)||(40487736-40487792)
chr8 (236-292)||(42113303-42113359)
chr8 (236-341)||(38726687-38726792)
chr8 (236-292)||(1949652-1949708)
chr8 (236-289)||(14767506-14767559)
chr8 (236-288)||(20875698-20875750)
chr8 (260-292)||(21144598-21144630)
[»] scaffold0449 (2 HSPs)
scaffold0449 (237-406)||(7227-7400)
scaffold0449 (236-347)||(7466-7578)
[»] scaffold0477 (2 HSPs)
scaffold0477 (236-406)||(4956-5124)
scaffold0477 (236-288)||(4880-4932)
[»] scaffold0185 (2 HSPs)
scaffold0185 (236-406)||(3869-4039)
scaffold0185 (236-379)||(4104-4247)
[»] scaffold0809 (2 HSPs)
scaffold0809 (236-406)||(1618-1784)
scaffold0809 (236-379)||(1411-1553)
[»] scaffold0141 (2 HSPs)
scaffold0141 (236-398)||(8538-8700)
scaffold0141 (236-289)||(8325-8378)
[»] scaffold0881 (2 HSPs)
scaffold0881 (302-406)||(286-390)
scaffold0881 (226-292)||(539-605)
[»] scaffold0117 (1 HSPs)
scaffold0117 (241-380)||(12216-12355)
[»] scaffold0176 (1 HSPs)
scaffold0176 (236-379)||(15867-16006)
[»] scaffold0352 (2 HSPs)
scaffold0352 (236-292)||(6001-6057)
scaffold0352 (236-350)||(4667-4781)
[»] scaffold0586 (1 HSPs)
scaffold0586 (232-275)||(5873-5916)
[»] scaffold0157 (1 HSPs)
scaffold0157 (242-290)||(226-274)


Alignment Details
Target: chr7 (Bit Score: 121; Significance: 7e-62; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 235 - 406
Target Start/End: Original strand, 20419535 - 20419706
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||         |||||||||||||||| ||||||||||||||||    
T  20419535 tgggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 20419634  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20419635 tccatttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaa 20419706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 23705038 - 23704869
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  23705038 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctt 23704940  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  23704939 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 23704869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 25772364 - 25772533
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||||||  ||||         ||||||||||||||||||||||||||||||||||    
T  25772364 gggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaaaa-gatttagattttgtccttgtaatttcatattctt 25772462  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25772463 ccacttttgttccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaa 25772533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 235 - 405
Target Start/End: Original strand, 38879722 - 38879893
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattc 333  Q
    ||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||          |||||||||||||||| |||||||||||||||    
T  38879722 tgggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 38879821  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaa 405  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  38879822 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacataaaatgagggaccaaa 38879893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 20458692 - 20458861
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||| | ||||||||| |||||||||| |||||||||||||||||||||||          ||||||||||||||  |||||||||| ||||||    
T  20458692 gggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaa-atttagattttgtcgctgtaatttcagattctt 20458790  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  20458791 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 20458861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 12006541 - 12006710
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||          ||| ||||||||||| |||||||||| ||||||    
T  12006541 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatt-agattttgtccctgtaatttcagattctt 12006639  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  12006640 ccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaa 12006710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 237 - 406
Target Start/End: Original strand, 44816832 - 44817005
Alignment:
Q  237 ggtaaatacctcttttc--gtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn--gatttagattttgtccttgtaatttcatatt 332  Q
    |||||||||||||||||  |||| ||||||||||||||||| ||||||||||| ||||           ||||| |||||||||| |||||||||| |||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagatt 44816931  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  44816932 cttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 44817005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 10409751 - 10409582
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||         |||||||||||||||  |||||||| | ||||||    
T  10409751 gggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtctctgtaattttagattctt 10409653  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || |||||||||||||||||| |||| ||||||||||||||| | ||||||||||||| |||||    
T  10409652 ccacttttgatccctcattccaccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaa 10409582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 23383497 - 23383670
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatatt 332  Q
    |||||||||||| ||||||||||  ||||||||||| |||||||||||||||||||| |          |||||||||||||||| | ||||||||||||    
T  23383497 atgggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatatt 23383596  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || | |||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  23383597 cttccattttttgtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 23383670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 378
Target Start/End: Original strand, 28218178 - 28218321
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||          |||||||||||||||| |||||||||| |||||    
T  28218178 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 28218277  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    ||||||| ||||||||||||||||||||| |||| |||||||||    
T  28218278 tccacttttggtccctcattccaccacgtcagcagaatctgcat 28218321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 235 - 406
Target Start/End: Original strand, 41599957 - 41600128
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| | |          ||||||||||||||| |||||||||| |||||    
T  41599957 tgggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattct 41600056  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||| | || |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  41600057 tccacatttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaa 41600128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 268 - 396
Target Start/End: Complemental strand, 24195142 - 24195014
Alignment:
Q  268 agcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagc 367  Q
    |||||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  24195142 agcgaaatccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccctcattccatcacgtaagc 24195043  T
Q  368 ataatctgcatacatggtacgtaaaatga 396  Q
    | |||||||||||||| ||||||||||||    
T  24195042 agaatctgcatacatgatacgtaaaatga 24195014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 20963494 - 20963665
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||| || ||||||||| ||||||||||| ||||||  ||||||||||||||          ||||||||||| |||| |||||||| | |||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||||||||| |||||||||||||||||||||    
T  20963594 tccacttttggtccctcattccgccacataagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 20963665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 12006918 - 12006776
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  12006918 gggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 12006819  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| ||||||||| || || ||||| |||| |||||||||    
T  12006818 ccacttttggtccctcctttcatcacgtcagcaaaatctgcat 12006776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 28218541 - 28218399
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  28218541 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 28218442  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| ||||||||| || || ||||| | || |||||||||    
T  28218441 ccacttttggtccctcctttcatcacgtcaacaaaatctgcat 28218399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 41600336 - 41600194
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  41600336 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 41600237  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| ||||||||| || || ||||| |||| |||||||||    
T  41600236 ccacttttggtccctcctttcatcacgtcagcaaaatctgcat 41600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 237 - 407
Target Start/End: Original strand, 48648263 - 48648432
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    |||||||| |||||||||||| |||||||| |||||||| || ||||||||| |||         |||||||||||||||| |||||||||| ||| ||     
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaagaaaaa-gatttagattttgtccctgtaatttcagatttttt 48648361  T
Q  337 cacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaat 407  Q
    || || |||||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||||||||    
T  48648362 catttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggaccaaaat 48648432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 48672277 - 48672449
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn--gatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||           ||||||||||| |||  |||||||||| ||||    
T  48672277 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcagattc 48672376  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| || |||||||||||||||||| |||| ||||||||||||||| | ||||||||||||| |||||    
T  48672377 ttccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaa 48672449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 235 - 378
Target Start/End: Original strand, 16995199 - 16995341
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||| |||||          ||||||||||||||| |||||||||| |||||    
T  16995199 tgggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaat-atttagattttgtccctgtaatttcagattct 16995297  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    ||||||| ||||||| ||||||||||||| |||| |||||||||    
T  16995298 tccacttttggtcccacattccaccacgtcagcagaatctgcat 16995341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 48672657 - 48672515
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||         |||||||||||| ||| |||||||||| ||||||    
T  48672657 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattctt 48672558  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| ||||||||| || || ||||| |||| |||||||||    
T  48672557 ccacttttggtccctcctttcatcacgttagcaaaatctgcat 48672515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 406
Target Start/End: Original strand, 31851242 - 31851409
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||||||||||||||| | ||||||||| ||||| || ||||||| |||||          ||||||||| |||| ||||||||||||||| |||    
T  31851242 ggtaaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgtaaaaaaaa--atttagattctgtcattgtaatttcatatttttc 31851339  T
Q  337 cacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||| || || ||| || |||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  31851340 cacttttgatctctcttttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 31851409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 379
Target Start/End: Original strand, 6465851 - 6465997
Alignment:
Q  232 aaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatat 331  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||          ||||||||| ||| |||||||||||| ||    
T  6465851 aaatgggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaat-atttagattatgttcttgtaatttcagat 6465949  T
Q  332 tcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||||||| ||||||||| || || ||||| || | ||||||||||    
T  6465950 tcttccacttttggtccctcctttcatcacgtcagaagaatctgcata 6465997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 1250580 - 1250441
Alignment:
Q  240 aaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccac 339  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||         |||||||||||||||| | |||||||||||||||||||    
T  1250580 aaatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccac 1250481  T
Q  340 ttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    || ||||||||| || || ||||| || | ||||||||||    
T  1250480 ttttggtccctcctttcatcacgtcagaagaatctgcata 1250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 33162914 - 33162743
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||  ||||||||||||||||| | |||||||||| | |          ||||| |||| |||| ||||||||||| |||||    
T  33162914 gggtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtccttataaaaaaaaaagatttggattatgtcattgtaatttcaaattct 33162815  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| | |||  ||||| |||||||| |||| ||||||||||||||| || ||||||||||||||||||    
T  33162814 tccacttttagtctttcatttcaccacgtcagcagaatctgcatacatggcacataaaatgagggaccaaaa 33162743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 45806879 - 45806799
Alignment:
Q  155 ctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  45806879 ctaatgtagcgattttttacttgattctgtgtttattggcgtttatatctatgattttcaatattaggttaatttttaaat 45806799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 239 - 406
Target Start/End: Original strand, 7657972 - 7658140
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt--nnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||           |||||||||| ||||| |||||||||| ||||||     
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaattctta 7658071  T
Q  337 cacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||| |||||| || || || ||||| |||| ||||||||| ||||  |||||||||||||||| ||||    
T  7658072 cacttttggtccatcctttcatcacgtcagcaaaatctgcat-catgtcacgtaaaatgagggactaaaa 7658140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 23383878 - 23383763
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||| |||||| | ||||||||||||          |||||||||||||||| |||||||||||||||||    
T  23383878 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23383779  T
Q  336 ccacttgtggtccctc 351  Q
    |||| | |||||||||    
T  23383778 ccacctttggtccctc 23383763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 23704662 - 23704776
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||         |||||| ||||||||| |||||||||| ||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgt-aaaaaaaagatttacattttgtccctgtaatttcagattctt 23704760  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  23704761 ccacttttggtccctc 23704776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 20419916 - 20419799
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||          |||||||||||||||| |||||||||| ||||    
T  20419916 tgggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 20419817  T
Q  334 ttccacttgtggtccctc 351  Q
    ||| |||| |||||||||    
T  20419816 ttctacttttggtccctc 20419799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 31588338 - 31588412
Alignment:
Q  159 tatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  31588338 tatagcgatttttcacttgattttgtgtttattggcgtttagatctctgattttca--attaggttaatttgtaaat 31588412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 233 - 379
Target Start/End: Complemental strand, 38880102 - 38879959
Alignment:
Q  233 aatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatatt 332  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    |          ||||||||||||||| |||||||||| |||    
T  38880102 aatgggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc---tttaaaaaaaaaatttagattttgtccctgtaatttcagatt 38880006  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||||| ||||||||| || ||||| || | || ||||||||||    
T  38880005 cttccacttttggtccctcctttcaccaagtcaacagaatctgcata 38879959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 20459068 - 20458954
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||||| |||||         |||||||||||||||  |||||||||| ||||||    
T  20459068 gggtaaatacctcttttcgtccctgtaatattagggaattccgg-tttagtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattctt 20458970  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  20458969 ccacttttggtccctc 20458954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 25772709 - 25772594
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| | ||||||||| ||||||| ||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  25772709 gggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 25772610  T
Q  336 ccacttgtggtccctc 351  Q
    | |||| |||||||||    
T  25772609 ctacttttggtccctc 25772594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 20963871 - 20963760
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||          |||||||||| |||| |||||||||| ||||||    
T  20963871 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaa-atttagatttagtccctgtaatttcagattctt 20963773  T
Q  336 ccacttgtggtcc 348  Q
     ||||| ||||||    
T  20963772 tcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 396
Target Start/End: Original strand, 1250273 - 1250366
Alignment:
Q  303 atttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatga 396  Q
    ||||| ||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||| |||  ||||||||||||||  | |||||||||    
T  1250273 atttaaattttgtccttttaattttagattcttccacttttggtctctcattccaccacgtcagctgaatctgcatacatgtcatgtaaaatga 1250366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 24195251 - 24195198
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtcc 288  Q
    ||||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  24195251 tgggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 7658342 - 7658287
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||||||| ||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgt 7658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 379
Target Start/End: Complemental strand, 48648603 - 48648464
Alignment:
Q  238 gtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcc 337  Q
    |||||||| |||||||||||  |||||||||||||||| || |||||||| || |         |||||||||||||||  |||||||| | ||||||||    
T  48648603 gtaaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctataaaaaaa--gatttagattttgtctatgtaattttagattcttcc 48648506  T
Q  338 acttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||| ||||||||| || || ||||| | || ||||||||||    
T  48648505 acttctggtccctcctttcatcacgtcaacagaatctgcata 48648464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 20963691 - 20963651
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  20963691 gtccttgtaatttcatattcttccacttttggtccctcatt 20963651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 31852208 - 31852157
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtc 287  Q
    |||| ||||||||||||||||| |||||||||| |||||| |||||||||||    
T  31852208 gggttaatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 31851548 - 31851506
Alignment:
Q  305 ttagattttgtccttgtaatttcatattcttccacttgtggtc 347  Q
    ||||||||||||| ||||||||||||||||||||||| |||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtc 31851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 45807039 - 45806981
Alignment:
Q  15 gattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctc 73  Q
    |||||||||||||||| |||||||| ||||||  |||||||||| |||||||| |||||    
T  45807039 gattcttctccgatcttcgccgtgatttttcttcgatctacacctcgcttcttattctc 45806981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 7658276 - 7658204
Alignment:
Q  307 agattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||||||| |||||||| | |||||||||||| ||||| ||| || || ||||| |||| ||||||||||    
T  7658276 agattttgtccctgtaatttaagattcttccacttttggtctctcctttcatcacgtcagcaaaatctgcata 7658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 350
Target Start/End: Original strand, 10409440 - 10409488
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccct 350  Q
    ||||||||||||||||||||||||||| ||||||| |||| | ||||||    
T  10409440 gatttagattttgtccttgtaatttcagattcttctacttttagtccct 10409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 14647028 - 14646972
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| ||||||  |||| |||| |||||||| |||||||||||||||||||||||||    
T  14647028 gggttaataccctttttagtccctgtaatatgagcgaattccggttttagtccctgt 14646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 44817142 - 44817098
Alignment:
Q  307 agattttgtccttgtaatttcatattcttccacttgtggtccctc 351  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||    
T  44817142 agattttgtccttataatttcatattctttcacttttggtccctc 44817098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 23258297 - 23258246
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| ||||||| |||  ||||||||||||||||||||||||| ||||||||    
T  23258297 aatatctcttttggtctctgtaatattagcgaattccggttttggtccctgt 23258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 6466195 - 6466127
Alignment:
Q  223 ttaatttgtaaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||| |||| ||||||||| ||||||| ||   ||||||||||||||||| ||||||||||| ||||    
T  6466195 ttaatttttaaa-gggtaaatatctctttttgtatctgtaatattagcgaatttcggttttagtctctgt 6466127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 292
Target Start/End: Original strand, 14630359 - 14630392
Alignment:
Q  259 tgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||| |||||||||||||||||||||||||    
T  14630359 tgtaatatgagcgaattccggttttagtccctgt 14630392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 20419732 - 20419692
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    |||| ||||||||||||||| ||||||| ||||||||||||    
T  20419732 gtccctgtaatttcatattcctccacttttggtccctcatt 20419692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 20458887 - 20458847
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  20458887 gtccttgtaatttcagattcctccacttttggtccctcatt 20458847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 25772559 - 25772519
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  25772559 gtccttgtaatttcagattcctccacttttggtccctcatt 25772519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 33131633 - 33131689
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||| | ||| |||| |||||||| ||||| |||||||||||||||||||    
T  33131633 gggttaataccccctttggtccctgtaatatgagcgatttccggttttagtccctgt 33131689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 44817031 - 44816991
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  44817031 gtccttgtaatttcagattcctccacttttggtccctcatt 44816991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 3e-61; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 24837169 - 24837339
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  24837169 gggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24837268  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  24837269 ccacttttggtccctcattccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaa 24837339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 4918989 - 4919160
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||| ||  ||||||||||||||||| |||||||||| |||||          |||||||||||||||| ||||||||||||||||    
T  4918989 gggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 4919088  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  4919089 tccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaa 4919160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 235 - 398
Target Start/End: Complemental strand, 23979280 - 23979117
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||| |||||    
T  23979280 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattct 23979181  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagg 398  Q
    ||||||| |||||||||||| |||||||| |||| ||||||||||||||  |||||||||||||    
T  23979180 tccacttttggtccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagg 23979117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 237 - 406
Target Start/End: Original strand, 993751 - 993917
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||          | |||||||| |||||||||||||||||||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaa---aattagatttagtccttgtaatttcatattcttc 993847  T
Q  337 cacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  993848 cacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 993917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 31799638 - 31799810
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||         |||||||||||||||| |||||||||| ||||    
T  31799638 atgggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattc 31799737  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| |||||||| ||||||||||||||||| ||| || |||||||| | |||||||||||||||||||    
T  31799738 ttccacttttggtcccttattccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaa 31799810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 17762660 - 17762490
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||         ||||||||||||||||   |||||||| ||||||    
T  17762660 gggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattctt 17762561  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||    
T  17762560 ccacttttggtccctcattccaccacgtaagcagaatttgcatacatgggacataaaatgagggaccaaaa 17762490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 6817123 - 6817292
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||         |||||||||| ||||| |||||||||| ||||||    
T  6817123 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattatgtccatgtaatttcagattctt 6817221  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||    
T  6817222 ccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaa 6817292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 14144279 - 14144109
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| ||||||||||||||||  |||||||||| ||||||||| |||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  14144279 gggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 14144180  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| | || ||||||||||||||| |||||||||||||||||||||    
T  14144179 ccacttttggtcccttattccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaaaa 14144109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 241 - 406
Target Start/End: Original strand, 7125923 - 7126087
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccact 340  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||||||||         |||||||||||||||| | |||||||| |||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtccctataatttcagattcttccact 7126021  T
Q  341 tgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    | |||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  7126022 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 7126087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 18336834 - 18336664
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||         |||||||||||||||| |||||||||| |||||    
T  18336834 tgggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336736  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| || ||||| ||| ||||| ||||||| ||| || |||||||  |||||||||||||||||||||    
T  18336735 tccacttttgatcccttattacaccatgtaagcagaatttgtatacatgtcacgtaaaatgagggaccaaaa 18336664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 14412043 - 14411874
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||| ||  | |||||||| |||||| ||||||||||||||||          |||||||||||||||||||||||||| ||||||    
T  14412043 gggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaa-atttagattttgtccttgtaatttcagattctt 14411945  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| | |||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||    
T  14411944 ccacgtttggtccctcattccaccacgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaa 14411874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 250 - 406
Target Start/End: Original strand, 41001370 - 41001523
Alignment:
Q  250 tttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtccc 349  Q
    |||||||| ||||||||||||||||| ||||||||||||||||          | ||||||||||||| ||||||||||||||||||||||| ||||||     
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcatattcttccacttttggtcct 41001466  T
Q  350 tcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||||||||||| ||||    
T  41001467 tcattccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaaaa 41001523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 238 - 406
Target Start/End: Original strand, 24650704 - 24650870
Alignment:
Q  238 gtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcc 337  Q
    |||||||||||||||||||| |||||||||| |||||| |||||||| ||  |||         |||||||||||||| | |||||||||||||||||||    
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaaa--gatttagattttgttcctgtaatttcatattcttcc 24650801  T
Q  338 acttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| ||||  ||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  24650802 acttttggtagctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaa 24650870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 29445183 - 29445014
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||| |||||||||||| ||||||||||||||||||| |||||||||| |||         ||||||||||||||||||||||||||| ||||||    
T  29445183 gggttaatatctcttttcgtccctgtaatattagcgaattccagttttagtcc-tgtaaaaaaaaagatttagattttgtccttgtaatttcagattctt 29445085  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| || | ||| ||||||||||  |||||||||||||||| ||||    
T  29445084 ccacttttggtcccttattccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggacaaaaa 29445014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 30512288 - 30512458
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| ||||||||||| |||||  |||||||||||||||         ||||||||||| |||| |||||||||| ||| ||    
T  30512288 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaag-gatttagatttggtccctgtaatttcagattttt 30512386  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgt-aaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| ||||    
T  30512387 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaa 30512458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 30552628 - 30552798
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| ||||||||||| |||||  |||||||||||||||         ||||||||||| |||| |||||||||| ||| ||    
T  30552628 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaag-gatttagatttggtccctgtaatttcagattttt 30552726  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgt-aaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| ||||    
T  30552727 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaa 30552798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 231 - 379
Target Start/End: Original strand, 14143897 - 14144044
Alignment:
Q  231 taaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcata 330  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| ||||||||||||    
T  14143897 taaaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcata 14143995  T
Q  331 ttcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||||||| |||| ||||||| || ||||| || | ||||||||||    
T  14143996 ttcttccacttttggtacctcatttcatcacgtcagtagaatctgcata 14144044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 24074303 - 24074446
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||          ||||||||||||||  |||||||||||||||||    
T  24074303 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattctt 24074402  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| || || ||||| |||| ||||||||||    
T  24074403 ccacttttggtccctcctttcatcacgtcagcagaatctgcata 24074446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 24074649 - 24074510
Alignment:
Q  267 tagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaag 366  Q
    |||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||||| |||||||| |||  ||||||| ||    
T  24074649 tagcgaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtcccttatttaaccacgtcag 24074550  T
Q  367 cataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    || |||||||||| |||| |||||||||||||||||||||    
T  24074549 cagaatctgcatatatggcacgtaaaatgagggaccaaaa 24074510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 7126295 - 7126152
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||         |||||||||||||||| |||||||||||||||||    
T  7126295 gggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7126196  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| || || ||||| |||| ||||||||||    
T  7126195 ccacttttggtccctcctttcatcacgtcagcagaatctgcata 7126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 20709206 - 20709382
Alignment:
Q  236 gggtaaatacctcttttcgtccatg----taatattagcgaattccggttttagtccctgtnnnnnnnnn--gatttagattttgtccttgtaatttcat 329  Q
    |||||||||||||||||||||| |     ||||||||| |||||||||||||||||| |||           |||||||||| ||||| ||||||||||     
T  20709206 gggtaaatacctcttttcgtccgtccttataatattagtgaattccggttttagtccatgtgaaaaaaaaaagatttagattctgtccctgtaatttcaa 20709305  T
Q  330 attcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||||||| |||||||||||| |||||||| |||| ||||||||||||||| |||||||||||||||| ||||    
T  20709306 attcttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggacaaaaa 20709382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 14411697 - 14411840
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||| ||||||||  |||||||||| ||||||    
T  14411697 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagattctt 14411796  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| || || ||||| |||| ||| ||||||    
T  14411797 ccacttttggtccctcctttcatcacgtcagcagaatttgcata 14411840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 27158991 - 27159158
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| | ||         |||||| ||||||||| |||||||||| ||||||    
T  27158991 gggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaaaa-gatttaaattttgtccctgtaatttcagattctt 27159089  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| |||| ||||| |||||  || ||||||||||||||| |||||    
T  27159090 ccacttttggtcccttattccaccacgtcagcaaaatctacatac--ggcacgtaaaatgagggatcaaaa 27159158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 17762283 - 17762425
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||         |||||| ||||||| | |||||||||| ||||||    
T  17762283 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttatattttgttcctgtaatttcagattctt 17762381  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| ||  | |||||||||| ||||||||||    
T  17762382 ccacttttggtccctcctttaatcacgtaagcagaatctgcata 17762425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 234 - 379
Target Start/End: Original strand, 29444804 - 29444949
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    ||||| ||||| |||||||||||| |||||||||| ||||||| | |||||||||||||         |||||||||| |||||||||||||||||||||    
T  29444804 atggggaaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattc 29444903  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||| |||| ||||||||| || || ||||| |||| ||||||||||    
T  29444904 ttctacttttggtccctcctttcatcacgtcagcagaatctgcata 29444949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 24837547 - 24837432
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  336 ccacttgtggtccctc 351  Q
    | |||| || ||||||    
T  24837447 ctacttttgctccctc 24837432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 351
Target Start/End: Complemental strand, 41001729 - 41001616
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||         |||||||||||||||| | |||||||| |||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgt-aaaaaaaagatttagattttgtccctataatttcagattcttc 41001631  T
Q  337 cacttgtggtccctc 351  Q
    ||||| |||||||||    
T  41001630 cacttttggtccctc 41001616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 341
Target Start/End: Complemental strand, 20709589 - 20709485
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||||||||||||||||||||||||||| ||||||  |||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  20709589 gggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgt-aaaaaaaagatttagattttgtccatgtaatttcatattctt 20709491  T
Q  336 ccactt 341  Q
    ||||||    
T  20709490 ccactt 20709485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 31800013 - 31799875
Alignment:
Q  240 aaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccac 339  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| |||||         |||||||||||||||| |||||||||| |||||||| |    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagt-cctgtaaaaaaaaagatttagattttgtccatgtaatttcagattcttcctc 31799915  T
Q  340 ttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    || || |||||| || || ||||| |||| ||| ||||||    
T  31799914 ttttgatccctcctttcatcacgtcagcagaatttgcata 31799875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 379
Target Start/End: Complemental strand, 27159327 - 27159192
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccact 340  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||          ||||||||||||||| |||||||| ||||||||||| |    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa---atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  341 tgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    | ||||||||  || || ||||| |||| ||||||||||    
T  27159230 tttggtcccttctttcatcacgtcagcagaatctgcata 27159192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 24651077 - 24650934
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||          || |||||||| ||| |||||||| | ||||||    
T  24651077 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattctt 24650978  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| || |||||| || || ||||| |||| |||| |||||    
T  24650977 ccacttttgatccctcctttcatcacgtcagcagaatccgcata 24650934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 363
Target Start/End: Original strand, 22571090 - 22571204
Alignment:
Q  249 ttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtcc 348  Q
    |||| |||| |||||||||||||||||||| |||||||||||||          ||||||||| | ||  ||||||||||||||||||||||| ||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattcttccacttttggtcc 22571189  T
Q  349 ctcattccaccacgt 363  Q
    |||||| ||||||||    
T  22571190 ctcatttcaccacgt 22571204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 18336466 - 18336583
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||| |||||||||||| | |||||||||||||||||| |||||||||||||          |||||||||||||||| |||||||||| ||||    
T  18336466 tgggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattc 18336565  T
Q  334 ttccacttgtggtccctc 351  Q
    |||| ||| || ||||||    
T  18336566 ttccgcttttgatccctc 18336583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 994124 - 994009
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||| |||| ||||  |||||| ||||||||| ||||||||||||||||         |||||||||||||||| ||||||| || |||||    
T  994124 tgggtaaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattct 994026  T
Q  335 tccacttgtggtccctc 351  Q
    ||||||| |||||||||    
T  994025 tccacttttggtccctc 994009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 4919366 - 4919311
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgt 4919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 6817432 - 6817388
Alignment:
Q  303 atttagattttgtccttgtaatttcatattcttccacttgtggtc 347  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 354
Target Start/End: Original strand, 41424516 - 41424634
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||||||||||| |||| || |||||||||||||||||||||  |||| |||           |||||||| ||||| ||| |||||| ||||||    
T  41424516 gggttaatacctcttttggtccttgcaatattagcgaattccggtttaggtccttgtaaaaaaaaaagtttagattctgtccctgtcatttcagattctt 41424615  T
Q  336 ccacttgtggtccctcatt 354  Q
    |||||| | ||||||||||    
T  41424616 ccacttttagtccctcatt 41424634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 28070532 - 28070569
Alignment:
Q  304 tttagattttgtccttgtaatttcatattcttccactt 341  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  28070532 tttagattctgtccttgtaatttcagattcttccactt 28070569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 9266975 - 9267145
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  9266975 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 9267074  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  9267075 ccacttttggtccctcattccagcacgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaa 9267145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 19112764 - 19112935
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||| || |||||||||||||    
T  19112764 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattct 19112863  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19112864 tccacttttggtcccttattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaa 19112935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 16722369 - 16722199
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  16722369 gggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattctt 16722270  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| ||||||||| ||||||| ||||||||||||||  |||||||||||||||||||||    
T  16722269 ccacttttggtcccttattccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 16722199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 35995678 - 35995848
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||           |||||||||||||| |||||||||| ||||||    
T  35995678 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattctt 35995777  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  35995778 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 35995848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 49986906 - 49986736
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnnga-tttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||||| |||||          | ||||||||||||| |||||||||||||||||    
T  49986906 gggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgtc-ttgtaatttcatattct 49986808  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49986807 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaa 49986736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 14162249 - 14162079
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||| |||||    
T  14162249 tgggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaga-gatttagattttgtccttgtaatttcagattct 14162151  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||| |||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||    
T  14162150 tccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaa 14162079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 5800983 - 5800813
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||||||||    
T  5800983 tgggttaatacctcttttcgtccctgtaatattagcgaattccggttt-agtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattct 5800885  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||| |||||||||| | |||| ||| ||||||||||| | |||||||||||||||||||    
T  5800884 tccacttttggtcccttattccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggaccaaaa 5800813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 20853695 - 20853866
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||  ||||||          |||||||||||||||| | ||||||||||||||    
T  20853695 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattct 20853794  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  20853795 tccacttttggtccctcattccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggaccaaaa 20853866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 30500043 - 30500211
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||          ||||||||||||||| |||||||||||||||||    
T  30500043 gggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcatattctt 30500140  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  30500141 ccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 30500211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 14262036 - 14262206
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||| |||          ||||||||||||||| |||||||||| ||||||    
T  14262036 gggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattctt 14262135  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||| | |||| ||||||||||||||| |||||||||||||||||||||    
T  14262136 ccacttttggtcccttattccaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 14262206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 21633274 - 21633104
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||| || |||||| ||||||||||||||||| | |||||||||||| |         |||||||||||||||| |||||||||| ||||||    
T  21633274 gggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattctt 21633175  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||    
T  21633174 ccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaa 21633104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 12833629 - 12833713
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12833629 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 12833713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 45970294 - 45970123
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||          |||||| ||||||||| |||||||||| |||||    
T  45970294 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattct 45970195  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||| || |||||||||||||||||| |||| |||||||||  |||||||||||||||||||||    
T  45970194 tccacttttggttccccattccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaa 45970123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 14171587 - 14171756
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||| |  ||||         |||||||||||||||| |||||||||| ||||||    
T  14171587 gggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaaaa-gatttagattttgtccctgtaatttcaaattctt 14171685  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  14171686 ccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaa 14171756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 45003873 - 45003704
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||  || |||||||| ||||||||||||||||| |||||||||| |||||         ||||||||||| |||| | |||||||||||||||    
T  45003873 gggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaa-gatttagatttagtccctataatttcatattctt 45003775  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| |||||    
T  45003774 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaa 45003704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 4204707 - 4204878
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    ||||||||| |||||||||||||| ||||||||||  ||||| | |||||||| |||||         |||||||||| ||||| |||||||||| ||||    
T  4204707 atgggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattc 4204805  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| |||||||||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  4204806 ttccacttttggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 4204878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 14262414 - 14262271
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||||||| ||    
T  14262414 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgtt 14262315  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| | ||||||| || || ||||| |||| ||||||||||    
T  14262314 ccacttttagtccctcctttcatcacgtcagcagaatctgcata 14262271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 17465367 - 17465538
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtc-cttgtaatttcatattct 334  Q
    ||||||||||||||||| |||| | |||||||||||||||| | ||||||| |||||         ||||||||||| ||| | |||||||||| |||||    
T  17465367 gggtaaatacctctttttgtccttttaatattagcgaattctgattttagtacctgtaaaaaaaatgatttagatttcgtctcctgtaatttcagattct 17465466  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| || || || |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  17465467 tccatttttgatctctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 17465538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 14171964 - 14171822
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||  ||||||    
T  14171964 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattctt 14171865  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| |||||| || || || ||||| |||| |||||||||    
T  14171864 ccacttttggtccttcctttcatcacgtcagcaaaatctgcat 14171822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 33372782 - 33372614
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||||||||  |||||||||||||||| || ||||||| |||||         |||||||||||||||| |||||||||| ||||||    
T  33372782 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattctt 33372683  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || |||| ||||||||||||| |||| ||||||||||| ||  ||||||||||||||| |||||    
T  33372682 ccacttttgatccc-cattccaccacgtcagcagaatctgcatac-tgacacgtaaaatgagggatcaaaa 33372614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 234 - 379
Target Start/End: Original strand, 5800603 - 5800748
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||         |||||||||| ||||| |||||||||||||||    
T  5800603 atgggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattc 5800702  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||| || ||||||||| || || ||||| |||| ||||||||||    
T  5800703 ttccatttttggtccctcctttcatcacgtcagcagaatctgcata 5800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 43572768 - 43572599
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||| ||| |||||||||  | ||||||||||||||| |||||          ||||||||| ||||| |||||||||| ||||||    
T  43572768 gggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaa-atttagattctgtccctgtaatttcagattctt 43572670  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||| |||||||| |||| ||||||| || |||  |||||||||||||||||||||    
T  43572669 ccacttttggtccctcatttcaccacgtcagcagaatctgcgtaaatgacacgtaaaatgagggaccaaaa 43572599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 237 - 379
Target Start/End: Complemental strand, 52553065 - 52552923
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||         |||||||||||||||  ||||||||||||||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttc 52552966  T
Q  337 cacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||| ||||||||| || || ||||| |||| ||||||||||    
T  52552965 cacttttggtccctcctttcatcacgtcagcagaatctgcata 52552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 234 - 379
Target Start/End: Original strand, 14161869 - 14162014
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| |||||||| ||| |         |||||||||| ||||| |||||||||||||||    
T  14161869 atgggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattc 14161968  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||||| ||||||||| || || ||||| |||| ||||||||||    
T  14161969 ttccacttttggtccctcctttcatcacgtcagcagaatctgcata 14162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12833479 - 12833556
Alignment:
Q  1 gaagcgaaaatggagattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctctgcgg 78  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12833479 gaagcgaaaatggcgattcttctctgatctccgccgtgacttttctccgatctacaccgcgcttcttcttctctgcgg 12833556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 20854073 - 20853931
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||         |||||||||||||||| |||||||||| ||||||    
T  20854073 gggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagt-cctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 20853975  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| || || || || | |||||||||||||    
T  20853974 ccacttttggtccctcctttcatcaagtcaacataatctgcata 20853931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 30500418 - 30500276
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||          ||||||||||||||| |||||||||||||| ||    
T  30500418 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaa-atttagattttgtccctgtaatttcatattgtt 30500320  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| || || ||||| |||| ||||| ||||    
T  30500319 ccacttttggtccctcctttcatcacgtcagcaaaatctacata 30500276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 52552758 - 52552862
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggac 401  Q
    |||||||||||||||| |||||||||| |||||||||||| || ||||| ||||||||| || |||| ||||||||||||||  ||||||||||||||||    
T  52552758 gatttagattttgtccctgtaatttcagattcttccacttttgatcccttattccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggac 52552857  T
Q  402 caaaa 406  Q
    |||||    
T  52552858 caaaa 52552862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 16721991 - 16722105
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||          ||||||||||||||| |||||||||| ||||||    
T  16721991 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattctt 16722090  T
Q  336 ccacttgtggtccct 350  Q
    |||||| ||||||||    
T  16722091 ccacttttggtccct 16722105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 378
Target Start/End: Original strand, 33372406 - 33372548
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||||||||| |||||         |||||||||||||||| |||||||||| ||| ||    
T  33372406 gggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagattatt 33372505  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| ||||||||| || || ||||| |||| |||||||||    
T  33372506 ccacttttggtccctcctttcatcacgtcagcaaaatctgcat 33372548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 336
Target Start/End: Original strand, 19720332 - 19720433
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| ||||||||||||||||    
T  19720332 tgggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 19720431  T
Q  335 tc 336  Q
    ||    
T  19720432 tc 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 348
Target Start/End: Original strand, 11003732 - 11003844
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||         || |||||||||||||||||||||||| ||||||    
T  11003732 gggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattctt 11003831  T
Q  336 ccacttgtggtcc 348  Q
    |||||| ||||||    
T  11003832 ccacttttggtcc 11003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 15328839 - 15328668
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||| ||||||||||||| ||  |||||||||||||||||  ||||||||||||  |          |||||||||||||||| |||||||||| ||| |    
T  15328839 gggttaatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcagatttt 15328740  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||| |||||||||||| |||| |||||||||| |||  |||||||||||| ||||||||    
T  15328739 tccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaa 15328668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 45969915 - 45970026
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  45969915 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 45970014  T
Q  336 ccacttgtggtc 347  Q
     ||||| |||||    
T  45970015 tcacttttggtc 45970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 406
Target Start/End: Complemental strand, 38283861 - 38283758
Alignment:
Q  303 atttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggacc 402  Q
    ||||||||||||||| | |||||||| |||||||||||| || ||||| ||| || ||||| |||| ||||||||||||||| |||||||||||||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatcccttatttcatcacgtcagcagaatctgcatacatggcacgtaaaatgagggacc 38283762  T
Q  403 aaaa 406  Q
    ||||    
T  38283761 aaaa 38283758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 38276390 - 38276316
Alignment:
Q  159 tatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  38276390 tatagcgatttttcacttgattttgtgtttattggcgtttagatctatgattttca--attaggttaatttgtaaat 38276316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 19113143 - 19113028
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||||||||         |||||||||||| ||| |||||||||| ||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  336 ccacttgtggtccctc 351  Q
    | |||| |||||||||    
T  19113043 ctacttttggtccctc 19113028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 43572389 - 43572504
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||          ||||||||||||||| |||||||||| ||||||    
T  43572389 gggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattctt 43572488  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  43572489 ccacttttggtccctc 43572504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 47575339 - 47575442
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggac 401  Q
    ||||||||||||||   |||||||| |||||||| ||||| |||||||| |||||||||||  |||| ||||||||||||||| |||||||||||||||     
T  47575339 gatttagattttgtttatgtaattttatattctttcacttttggtccct-attccaccacggcagcagaatctgcatacatggcacgtaaaatgagggat 47575437  T
Q  402 caaaa 406  Q
    |||||    
T  47575438 caaaa 47575442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 45003495 - 45003611
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||||||| ||||||| |         |||||||||||||||| |||||||||| |||||    
T  45003495 tgggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattct 45003594  T
Q  335 tccacttgtggtccctc 351  Q
    ||||||| | |||||||    
T  45003595 tccactttttgtccctc 45003611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 49986527 - 49986639
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||          |||||||||||||||| |||||||||| |||||    
T  49986527 gggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 49986626  T
Q  335 tccacttgtggtc 347  Q
    || |||| |||||    
T  49986627 tctacttttggtc 49986639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 9267352 - 9267296
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  9267352 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgt 9267296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 27946243 - 27946187
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  27946243 gggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 7814548 - 7814472
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    ||||||||||||||||| | ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  7814548 gcacctaatatagcgatttcttacttgattttgtgttt--------ttagatctatgattttcaatattaggttaatttgtaaat 7814472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 35996053 - 35995997
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||    
T  35996053 gggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgt 35995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 379
Target Start/End: Original strand, 38283553 - 38283693
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcca 338  Q
    |||||| |||||||| ||| |||||||||| ||||||||||||||||||| |||          ||||||||||||| | | |||||||||||| |||||    
T  38283553 taaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttcca 38283652  T
Q  339 cttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||| || |||||| || || ||||| |||| ||||| ||||    
T  38283653 cttttgatccctcctttcatcacgtcagcagaatctacata 38283693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 21632901 - 21633011
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||     |||||||||||||         ||| ||||| |||||| |||||||||| ||||||    
T  21632901 gggtaaatacctcttttcgtccctgtaatattagcgaat-----ttttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagattctt 21632995  T
Q  336 ccacttgtggtccctc 351  Q
     ||||| |||||||||    
T  21632996 tcacttttggtccctc 21633011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 379
Target Start/End: Original strand, 15328460 - 15328603
Alignment:
Q  233 aatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatatt 332  Q
    ||||||||||||||||||||||| | |||||||||||  |||| || |||||||||||||          | ||||||||||||| ||||||||||||||    
T  15328460 aatgggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcatatt 15328556  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||   ||||||| || || ||||| | || ||||||||||    
T  15328557 cttccagtttgtgtccctcttttcatcacgtcaacagaatctgcata 15328603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 3426026 - 3425973
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccc 289  Q
    |||| |||||||||||| | || |||||||||||||||||||||||||||||||    
T  3426026 gggttaatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 339
Target Start/End: Complemental strand, 17649384 - 17649285
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcca 338  Q
    |||||||||||||||| || ||||||| |||||||||||||||||||| ||||          |||||||||||||||| |||||||||| ||| |||||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctg-gaaaaaaaagatttagattttgtccctgtaatttcagattattcca 17649286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 3424774 - 3424830
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||||||||| |||| |||||||||||||| |||||||||| ||||||||    
T  3424774 gggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgt 3424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 17465745 - 17465697
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggtttta 284  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  17465745 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagtttta 17465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 35741962 - 35741906
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||| ||||| |||| ||||||||||||||||||| ||||||||||||||    
T  35741962 gggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgt 35741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 24490297 - 24490242
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctg 291  Q
    ||||||||| || ||||| ||| ||||||||||| |||||||||||||||||||||    
T  24490297 gggtaaatatcttttttcctccctgtaatattagtgaattccggttttagtccctg 24490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 352
Target Start/End: Original strand, 35740816 - 35740931
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||| |||||  ||||| |||| ||||||||||||||||||||||||||||||| ||           |||||||||||||| |||||||| | |||||    
T  35740816 tgggttaatactacttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaag--tttagattttgtccctgtaattttaaattct 35740913  T
Q  335 tccacttgtggtccctca 352  Q
    ||||||| | ||||||||    
T  35740914 tccacttttagtccctca 35740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 7814724 - 7814666
Alignment:
Q  15 gattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctc 73  Q
    ||||||||||||||||||||||||| ||||||  | |||||| | ||||||||||||||    
T  7814724 gattcttctccgatctccgccgtgatttttcttcggtctacatctcgcttcttcttctc 7814666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 36991025 - 36990922
Alignment:
Q  248 cttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtc 347  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||         | |||||||| ||||| |||||||| | |||||||||||| | |||    
T  36991025 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattcttccacttttagtc 36990927  T
Q  348 cctca 352  Q
    |||||    
T  36990926 cctca 36990922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 352
Target Start/End: Complemental strand, 37016465 - 37016362
Alignment:
Q  248 cttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtc 347  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||         | |||||||| ||||| |||||||| | |||||||||||| | |||    
T  37016465 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattcttccacttttagtc 37016367  T
Q  348 cctca 352  Q
    |||||    
T  37016366 cctca 37016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 45058803 - 45058738
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagc 367  Q
    |||||||||||||||  |||||||||| ||||||||| || || ||||| ||||||||| ||||||    
T  45058803 gatttagattttgtctctgtaatttcagattcttccatttttgatcccttattccaccatgtaagc 45058738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 46850550 - 46850507
Alignment:
Q  249 ttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||||||||||||||||||||| |||||||| |||||    
T  46850550 tttttgtccatgtaatattagcgaattcctgttttagttcctgt 46850507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 9267171 - 9267131
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  9267171 gtccttgtaatttcagattcctccacttttggtccctcatt 9267131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 21633078 - 21633118
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  21633078 gtccttgtaatttcagattcctccacttttggtccctcatt 21633118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 35995878 - 35995834
Alignment:
Q  310 ttttgtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    |||||||| ||||||||||| ||| ||||||| ||||||||||||    
T  35995878 ttttgtccctgtaatttcatgttcctccacttttggtccctcatt 35995834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 38283728 - 38283772
Alignment:
Q  310 ttttgtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    |||||||| |||||||||| |||| ||||||| ||||||||||||    
T  38283728 ttttgtccgtgtaatttcaaattcctccacttttggtccctcatt 38283772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 47575649 - 47575593
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||||||| ||||||   ||||||| || |||||| |||||||||||||||    
T  47575649 gggtaaatacctctattcgtctccgtaatatgagtgaattctggttttagtccctgt 47575593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 4940 - 4771
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||         ||||||||||||||||||||||||||||||||||    
T  4940 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataa-gatttagattttgtccttgtaatttcatattctt 4842  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4841 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaa 4771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 4562 - 4678
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||          |||||| ||||||||| |||||||| | |||||    
T  4562 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattct 4661  T
Q  335 tccacttgtggtccctc 351  Q
    || |||| |||||||||    
T  4662 tctacttttggtccctc 4678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 237 - 406
Target Start/End: Original strand, 9516611 - 9516780
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||| |||         |||||||||||||||||||||||||||||||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttc 9516710  T
Q  337 cacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  9516711 cacttttggtccctcattccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaa 9516780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 234 - 406
Target Start/End: Complemental strand, 26252617 - 26252445
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||         |||||||||||||||| |||||||||||||||    
T  26252617 atgggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 26252518  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| ||||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  26252517 ttccacttttggtcccccattccactacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 26252445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 38573969 - 38574138
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||         |||||||||||||||| |||||||||||||||||    
T  38573969 gggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctt 38574067  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||    
T  38574068 ccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaa 38574138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 9619357 - 9619187
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  9619357 gggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattctt 9619258  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||| ||||||||||||||||||| |||||| |||| ||| |||||||| |||||| |||||    
T  9619257 ccacttttggtccttcattccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaa 9619187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 235 - 406
Target Start/End: Original strand, 31090059 - 31090231
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattc 333  Q
    ||||||||||| |||||| |||| ||||||||||| ||||| || |||||||||||||          |||||||||||||||| |||||||||||||||    
T  31090059 tgggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 31090158  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||    
T  31090159 ttccacttttggtccctcattccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaa 31090231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 31944328 - 31944158
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||          | ||||||||||||| |||||||||||||||||    
T  31944328 gggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattctt 31944229  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| | ||||||||||||||||||| | || ||||||||||| ||| |||||||||||||||||||||    
T  31944228 ccactttttgtccctcattccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaa 31944158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 9397076 - 9396907
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  9397076 gggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagattctt 9396978  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| ||| || |||||||| ||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  9396977 ccacttttggaccatcattccaacacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 9396907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 241 - 406
Target Start/End: Original strand, 37012712 - 37012877
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccact 340  Q
    ||||||||||||||||| ||||||||||||||||||   ||| ||||| |||         |||||||||||||||| |||||||||| |||||||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  341 tgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    | |||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  37012812 tttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 37012877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 46046430 - 46046594
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||          |  |||||||||||| |||||||||||||||||    
T  46046430 gggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa------aaatagattttgtccctgtaatttcatattctt 46046523  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || |||||||||||||||||| || | ||||||||||||||| ||||||||||||||| |||||    
T  46046524 ccacttttgatccctcattccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaaa 46046594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 239 - 406
Target Start/End: Complemental strand, 35376502 - 35376336
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcca 338  Q
    |||||| |||||||||||| |||||||||||| |||||| ||||||||||||||         |||||| ||||||||| |||||||||| | |||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaa-gatttaaattttgtccctgtaatttcagaatcttcca 35376404  T
Q  339 cttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||| ||||||||||||||||||||| |||| |||||| |||||||  |||||||||||||||||||||    
T  35376403 cttttggtccctcattccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaaaa 35376336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 3018388 - 3018220
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||| |||||||||||| |||||||||| |||||| ||||||||||||||||         ||||||||||| |||| |||||||||| |||||     
T  3018388 gggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaa-gatttagattt-gtccgtgtaatttcagattcta 3018291  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  3018290 ccacttttggtcccttattccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaa 3018220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 237 - 406
Target Start/End: Original strand, 34063983 - 34064152
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||||||||||||||| |||||||||| |||||||  ||||||||||||||         |||||||||||||||  |||||||||| |||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T
Q  337 cacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||| ||||||||||||||||||| | |||  ||||| ||||||||| | |||||||||||||| ||||    
T  34064083 cacttttggtccctcattccaccacatcagccgaatctacatacatggcatgtaaaatgagggactaaaa 34064152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 306 - 406
Target Start/End: Complemental strand, 7819322 - 7819222
Alignment:
Q  306 tagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaa 405  Q
    |||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaa 7819223  T
Q  406 a 406  Q
    |    
T  7819222 a 7819222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 238 - 406
Target Start/End: Complemental strand, 48260126 - 48259959
Alignment:
Q  238 gtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcc 337  Q
    ||||||| |||||||||||| |||||||||||||||||  | ||||| || ||||         |||||||||||||||| |||||||||| ||||||||    
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaaaa-gatttagattttgtccctgtaatttcaaattcttcc 48260028  T
Q  338 acttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| || || ||||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  48260027 acttttgatcgctcattccatcacgtcagcataatctgcatacatggcacgtaaaatgagggatcaaaa 48259959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 234 - 379
Target Start/End: Original strand, 3018009 - 3018155
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatatt 332  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||          |||||||||||||||| ||||||||||||||    
T  3018009 atggataaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 3018108  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||||| ||||||||| || || ||||| |||| ||||||||||    
T  3018109 cttccacttttggtccctcctttcatcacgtcagcagaatctgcata 3018155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 235 - 398
Target Start/End: Complemental strand, 3273997 - 3273836
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||||||||| |         |||||||||||| ||| |||||||||| |||||    
T  3273997 tgggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaaaa-gatttagattttatccctgtaatttcagattct 3273900  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagg 398  Q
    ||||||| || ||||||||| |||||||| || | ||||||||||||||| |||||||||||||    
T  3273899 tccacttttgatccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatgagg 3273836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 237 - 406
Target Start/End: Complemental strand, 15641093 - 15640923
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||          |||||||||| ||||| |||||||||| ||||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattctt 15640994  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||| ||||||| |||||||| |||| ||| ||||||||||  ||||||||||| |||||||||    
T  15640993 ccacttttggttcctcatttcaccacgtcagcagaatatgcatacatgacacgtaaaatgatggaccaaaa 15640923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 4356253 - 4356089
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccact 340  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||| || ||||          |||| |||||||||  |||||||||| |||||||||||    
T  4356253 aatacctcttttcatccctgtaatattagcgaatttcggttttaatctctgtaataaaaaaaattt-gattttgtctctgtaatttcaaattcttccact 4356155  T
Q  341 tgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    | |||||||| |||||||||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  4356154 tttggtcccttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 4356089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 9618982 - 9619095
Alignment:
Q  238 gtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcc 337  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||| ||||||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttcc 9619081  T
Q  338 acttgtggtccctc 351  Q
    |||| |||||||||    
T  9619082 acttttggtccctc 9619095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 239 - 378
Target Start/End: Complemental strand, 38574343 - 38574204
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcca 338  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||| ||||||||||||||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  339 cttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    ||| ||||||||| || || ||||| | || |||||||||    
T  38574243 cttttggtccctcctttcatcacgtcaacaaaatctgcat 38574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 46046801 - 46046660
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  46046801 gggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 46046703  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| || |||||| || || ||||| |||| |||||||||    
T  46046702 ccacttttgatccctcctttcatcacgtcagcaaaatctgcat 46046660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 399
Target Start/End: Original strand, 13131943 - 13132104
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattcttcc 337  Q
    ||||||||||||||||||| |||||||||| |||||| | ||||||||||||||          |||||||||| ||| | |||||||||| ||||||||    
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttcc 13132042  T
Q  338 acttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgaggg 399  Q
    |||| || ||||||||| |||||||| |||| ||||||||||||||  ||||||||||||||    
T  13132043 acttttgatccctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgaggg 13132104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 406
Target Start/End: Original strand, 48579871 - 48580036
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccact 340  Q
    ||||||||||||||||| |||||||||| |||| | |||||||||||  |||         |||||||||||||||  |||||||||| |||||| || |    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctttcaat 48579970  T
Q  341 tgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    | |||||||| |||||||||||| |||| ||||| ||||||||| ||||||||||||||| |||||    
T  48579971 tttggtcccttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggagcaaaa 48580036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 37013084 - 37012942
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||          | ||||||||||||| |||||||||||||||||    
T  37013084 gggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaa-aattagattttgtccctgtaatttcatattctt 37012986  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||| ||| || || ||||| |||| ||||||||||    
T  37012985 ccacttttggtcactcctttcatcacgtcagcaaaatctgcata 37012942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 379
Target Start/End: Original strand, 9396696 - 9396842
Alignment:
Q  233 aatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatatt 332  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| || |||||||| ||||         |||||||||||||||| | |||||||| |||    
T  9396696 aatggataaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatt 9396795  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
     |||||||| ||||||||| || || ||||| |||| ||||||||||    
T  9396796 tttccacttttggtccctcctttcatcacgtcagcagaatctgcata 9396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 9516989 - 9516873
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||         |||||||||||||||| |||||||||| |||||    
T  9516989 tgggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 9516890  T
Q  335 tccacttgtggtccctc 351  Q
    || |||| |||||||||    
T  9516889 tctacttttggtccctc 9516873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 364
Target Start/End: Original strand, 12904747 - 12904874
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| | |||||||||||||||  |||||||||||||||          ||||||||||||||||| |||||||| ||||||    
T  12904747 gggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaa-atttagattttgtccttataatttcagattctt 12904845  T
Q  336 ccacttgtggtccctcattccaccacgta 364  Q
    |||||| ||||| ||||||||||||||||    
T  12904846 ccacttttggtctctcattccaccacgta 12904874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 15640715 - 15640830
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||         |||||||||||||||| ||||||||||||||||    
T  15640715 tgggttaacacctcttttcgtccctgtaatattagcgaattccggttttagttcctgt-aaaaaaaagatttagattttgtccctgtaatttcatattct 15640813  T
Q  335 tccacttgtggtccctc 351  Q
    | ||||| |||||||||    
T  15640814 ttcacttttggtccctc 15640830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 18667668 - 18667497
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngattta-gattttgtccttgtaatttcatattct 334  Q
    |||| ||||||||||||||||| ||||||||||||||||||| |||||| ||| |||          |   | ||||||| || |||||||||| |||||    
T  18667668 gggttaatacctcttttcgtccctgtaatattagcgaattccagttttaatccttgtaaaaaaaaaaaaaaaagattttgaccctgtaatttcagattct 18667569  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| || | |||||| |||||||||||| || | ||||||||||||||| |||||||||||||||||||||    
T  18667568 tccagtttttgtcccttattccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaa 18667497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 18713272 - 18713168
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggac 401  Q
    |||||||||||||||  |||||||||| ||||||||| || |||||||| |||||||||||| |||| ||||| ||||||| | ||||||| ||||||||    
T  18713272 gatttagattttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtcagcagaatctacatacattgaacgtaaactgagggac 18713173  T
Q  402 caaaa 406  Q
    |||||    
T  18713172 caaaa 18713168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 379
Target Start/End: Original strand, 4355887 - 4356024
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccact 340  Q
    |||||||||||| || ||| |||||||||||||||||||||||||| |||||         | |||||||||||||  ||||||||||||||||| ||||    
T  4355887 aatacctctttttgttcatataatattagcgaattccggttttagttcctgtaaaaacaa-gctttagattttgtctatgtaatttcatattctttcact 4355985  T
Q  341 tgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    | |||||||||||| || ||||| |||| ||||||||||    
T  4355986 tttggtccctcatttcatcacgttagcagaatctgcata 4356024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 31943950 - 31944061
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||          |||||||||||||||| ||||||||||||||||    
T  31943950 gggtaaatac-tcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattct 31944048  T
Q  335 tccacttgtggtc 347  Q
    ||||||| |||||    
T  31944049 tccacttttggtc 31944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 378
Target Start/End: Original strand, 7819018 - 7819156
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcca 338  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| | |||         |||||||||||||||| |||||||||| |||||||||    
T  7819018 taaatacctcttttcgaccatataatattagcgaattccggttttagt-catgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 7819116  T
Q  339 cttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    ||| |||| |||| || || ||||| || | |||||||||    
T  7819117 cttttggttcctcctttcatcacgttagtaaaatctgcat 7819156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 31218359 - 31218303
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31218359 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 48259823 - 48259938
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||         |||||||||||||||| |||||||||| |||| |    
T  48259823 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagattcct 48259922  T
Q  336 cc-acttgtggtccct 350  Q
    || |||| ||||||||    
T  48259923 cctacttttggtccct 48259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 48580239 - 48580129
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccact 340  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||   |         |||||||||||||||| |||||||||||||| |||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttcatattgttccact 48580140  T
Q  341 tgtggtccctc 351  Q
    | |||||||||    
T  48580139 tttggtccctc 48580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 379
Target Start/End: Original strand, 35376164 - 35376305
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||         |||||||||||||||  |||||||| | |||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgt-aaaaaaaagatttagattttgtctctgtaattttagattcttc 35376262  T
Q  337 cacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||| ||||| ||| || || ||||| |||| |||| |||||    
T  35376263 cacttttggtctctcctttcatcacgtcagcagaatccgcata 35376305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 3273621 - 3273737
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatt-tagattttgtccttgtaatttcatattct 334  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||           || |||||||||||| ||||||||||||||||    
T  3273621 gggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatattct 3273720  T
Q  335 tccacttgtggtccctc 351  Q
    ||||||| |||||||||    
T  3273721 tccacttttggtccctc 3273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 31090439 - 31090324
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| ||||||||||||||||| || |||||||||||||          | ||||||||||||| |||||||||| ||||||    
T  31090439 gggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattctt 31090340  T
Q  336 ccacttgtggtccctc 351  Q
    | |||| |||||||||    
T  31090339 ctacttttggtccctc 31090324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 41946960 - 41947020
Alignment:
Q  231 taaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctg 291  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  41946960 taaaagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 235 - 350
Target Start/End: Complemental strand, 41947233 - 41947120
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||||||| | |          | |||||||||||||||||||||||||||| |    
T  41947233 tgggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtccttttaaaaaaaa--aattagattttgtccttgtaatttcatatttt 41947136  T
Q  335 tccacttgtggtccct 350  Q
    ||||||| ||||||||    
T  41947135 tccacttttggtccct 41947120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 13132317 - 13132205
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||| ||||||||| ||||||||||||||||| || ||||||||| |||         |||||||||| ||||| |||||||||||||||||    
T  13132317 gggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtcc-tgtaaaaaaaa-gatttagattctgtccctgtaatttcatattctt 13132220  T
Q  336 ccacttgtggtccct 350  Q
    |||||| ||||||||    
T  13132219 ccacttttggtccct 13132205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 1242684 - 1242608
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    |||||||| |||||||| | ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  1242684 gcacctaagatagcgatttcttacttgattttgtgttt--------ttagatctatgattttcaatattaggttaatttgtaaat 1242608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 379
Target Start/End: Original strand, 18713026 - 18713103
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||||||||||||| |||||||||||||| ||||| || ||||||||| || || ||||| |||| ||||||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatcacgtcagcaaaatctgcata 18713103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 34064294 - 34064217
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||||||||||||  |||||||||| |||||||||||| ||||||||  || || ||||| |||| ||||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatcacgtcagcagaatctgcata 34064217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 36887680 - 36887736
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||||||||| |||| |||||||||||||||||  |||||||||||||||    
T  36887680 gggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgt 36887736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 1242861 - 1242803
Alignment:
Q  15 gattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctc 73  Q
    ||||||||||||||||||||||||| ||||||  | |||||| | ||||||||||||||    
T  1242861 gattcttctccgatctccgccgtgatttttcttcggtctacatctcgcttcttcttctc 1242803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 26252337 - 26252383
Alignment:
Q  305 ttagattttgtccttgtaatttcatattcttccacttgtggtccctc 351  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctc 26252383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 43313590 - 43313533
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||| |||||| ||||| |||  |||||||||||||||||| |||||||||||||||    
T  43313590 tgggttaataccacttttggtctctgtaatattagcgaattctggttttagtccctgt 43313533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 12904962 - 12904906
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||| |||||||||  ||||||||||||||||||  | |||||||||||||    
T  12904962 gggtaaatacatcttttcgtttatgtaatattagcgaattttgattttagtccctgt 12904906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 53896446 - 53896502
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| ||||||||||||  ||  |||||||| |||||||||||||||||||||||||    
T  53896446 gggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgt 53896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 7819398 - 7819347
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtc 287  Q
    ||||||||| || |||||||||  |||||||||||||||| |||||||||||    
T  7819398 gggtaaatatcttttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 51029141 - 51029095
Alignment:
Q  246 ctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||| |||| |||||||| |||||||| ||||||||||||||||    
T  51029141 ctcttttggtccctgtaatatgagcgaatttcggttttagtccctgt 51029095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 50462774 - 50462733
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattcc 277  Q
    |||| |||||||||||| |||| |||||||||||||||||||    
T  50462774 gggttaatacctcttttggtccctgtaatattagcgaattcc 50462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 4356063 - 4356103
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  4356063 gtccttgtaatttcaaattcctccacttttggtccctcatt 4356103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 7819196 - 7819236
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    |||| ||||||||||||||| ||||||| ||||||||||||    
T  7819196 gtccatgtaatttcatattcctccacttttggtccctcatt 7819236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 12520643 - 12520691
Alignment:
Q  242 atacctcttttcgtccatgtaatattagcgaattccggttttagtccct 290  Q
    ||||| ||||| |||| | ||||||||||||||||| ||||||||||||    
T  12520643 ataccacttttagtccctataatattagcgaattccagttttagtccct 12520691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 31082185 - 31082241
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||||| |||||||||| | |||||| |||||||||| | ||| ||||||||    
T  31082185 gggtaaataccccttttcgtccctataatatgagcgaattccaggtttggtccctgt 31082241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 31083476 - 31083428
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggtttt 283  Q
    |||||||||  | |||||||||| |||||||| ||||||||||||||||    
T  31083476 tgggtaaatgtcccttttcgtccctgtaatatgagcgaattccggtttt 31083428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 37012903 - 37012863
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    ||||||||||||||| |||| ||||||| ||||||||||||    
T  37012903 gtccttgtaatttcaaattcctccacttttggtccctcatt 37012863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 2e-56; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 24732315 - 24732146
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||         |||||||||||||||| |||||||||||||||||    
T  24732315 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattt-agtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattctt 24732217  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24732216 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaa 24732146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 232 - 406
Target Start/End: Original strand, 26385274 - 26385448
Alignment:
Q  232 aaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatat 331  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| |||         |||||||||||||||| |||||||| ||||    
T  26385274 aaatgggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatat 26385373  T
Q  332 tcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||||| |||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  26385374 tcttccacttttggtccctcattccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaa 26385448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 18500315 - 18500484
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  18500315 gggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaa-gatttagattttgtccctgtaatttcatattctt 18500413  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  18500414 ccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 18500484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 33714481 - 33714657
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggtttta--gtccctgtnnnnnnnnn--gatttagattttgtccttgtaatttcat 329  Q
    |||| ||||||  ||||||||||| ||||||||||||||||||||||||||  ||||||||           ||||||||||||||||||||||||||||    
T  33714481 atggctaaataaatcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcat 33714580  T
Q  330 attcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33714581 attcttccacttttggtccctcattccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaa 33714657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 233 - 379
Target Start/End: Original strand, 9481179 - 9481325
Alignment:
Q  233 aatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatatt 332  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||| ||||| ||||||||||||||    
T  9481179 aatgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatatt 9481278  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| || ||||||||| || || ||||| |||| ||||||||||    
T  9481279 cttccaattttggtccctcctttcatcacgtcagcagaatctgcata 9481325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 9481494 - 9481390
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggac 401  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||| |||| ||| ||||||||||| ||| ||||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggac 9481395  T
Q  402 caaaa 406  Q
     ||||    
T  9481394 aaaaa 9481390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 32017881 - 32017767
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  32017881 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctt 32017783  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  32017782 ccacttttggtccctc 32017767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 248 - 384
Target Start/End: Complemental strand, 9854251 - 9854117
Alignment:
Q  248 cttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtc 347  Q
    ||||| |||| |||||||||||||||||| ||||||||||  |||          ||||||||||||||||||||||||||||||||||||||| |||||    
T  9854251 ctttttgtccctgtaatattagcgaattctggttttagtc--tgtaaaaataataatttagattttgtccttgtaatttcatattcttccacttttggtc 9854154  T
Q  348 cctcattccaccacgtaagcataatctgcatacatgg 384  Q
    ||||||| |||||||| |||| |||||||||||||||    
T  9854153 cctcatttcaccacgtcagcaaaatctgcatacatgg 9854117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 246 - 406
Target Start/End: Original strand, 32017550 - 32017706
Alignment:
Q  246 ctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtgg 345  Q
    ||||||| |||||||| ||||||||||||| || |||||||| ||||          |||||||||||||  ||||||||||| |||||||||||| |||    
T  32017550 ctctttttgtccatgtgatattagcgaatttcgattttagtctctgtaaaaaaac--atttagattttgt--ttgtaatttcagattcttccacttttgg 32017645  T
Q  346 tccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||| | |||||||||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  32017646 tcctttattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 32017706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 14680949 - 14681052
Alignment:
Q  303 atttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggacc 402  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||| |||| ||||||||||||||  |||| ||| ||| ||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtccttcatttcaccacgtcagcagaatctgcatacatgacacgtgaaaagagagacc 14681048  T
Q  403 aaaa 406  Q
    ||||    
T  14681049 aaaa 14681052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 19284130 - 19284244
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||         |||||||||||||||| |||||||||| |||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttc 19284229  T
Q  337 cacttgtggtccctc 351  Q
    ||||| |||||||||    
T  19284230 cacttttggtccctc 19284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 406
Target Start/End: Complemental strand, 30618272 - 30618169
Alignment:
Q  303 atttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggacc 402  Q
    ||||||||||||||| |||||||| | |||||||||||| | ||| || |||||||||||| |||| ||||| ||||||||| |||||||||||||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtcagcagaatctacatacatggcacgtaaaatgagggacc 30618173  T
Q  403 aaaa 406  Q
    ||||    
T  30618172 aaaa 30618169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 33637895 - 33637736
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||| ||  |||||||||| |||||| |||||||||||  |||          | ||||| ||||||| |||||||||||||||||    
T  33637895 gggtaaatacctcttttcatctttgtaatattaccgaatttcggttttagtctgtgt----------aattaga-tttgtccctgtaatttcatattctt 33637807  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
     ||||| || |||||||||||||||||| |||| |||||||||||||   |||||||||||||||||||||    
T  33637806 tcacttttgatccctcattccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaa 33637736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 240 - 399
Target Start/End: Original strand, 10321737 - 10321893
Alignment:
Q  240 aaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccac 339  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||             ||||||| | ||| ||||||||||||||||| |||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaata---ttagattatatccctgtaatttcatattcttacac 10321833  T
Q  340 ttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgaggg 399  Q
    || || ||||||||| |||||||| ||||  |||||||||||||| ||||||||| ||||    
T  10321834 ttttgctccctcatttcaccacgtcagcagtatctgcatacatggcacgtaaaataaggg 10321893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 314 - 406
Target Start/End: Original strand, 2299389 - 2299480
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| |||||||||| |||||||||||| | |||||||||||||||||||||||| ||| || |||||||| |||||||||||||||||||||    
T  2299389 gtccctgtaatttca-attcttccacttttagtccctcattccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaa 2299480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 26385649 - 26385541
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcca 338  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||         ||||||||| |||| | || |||||||||||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  339 cttgtggtc 347  Q
    ||| |||||    
T  26385549 cttttggtc 26385541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 24731935 - 24731991
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24731935 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 24731991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 406
Target Start/End: Original strand, 30458903 - 30459071
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattcttcc 337  Q
    ||||||| ||||||||||| ||||||||||| ||||| |||||||||| || ||          |||||||||| ||||  |||||||||| |||||||     
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatttcggttttagttcccgtaaaaaaaaaagatttagattatgtcactgtaatttcagattcttca 30459002  T
Q  338 acttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| | ||| |||||| |||||||| |||| ||||||||||||||  |||||||||||| || |||||    
T  30459003 acttttagtctctcatttcaccacgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaa 30459071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 379
Target Start/End: Original strand, 30617962 - 30618105
Alignment:
Q  231 taaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcata 330  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||| | ||||||||| |            ||||||||||||||| ||||||||||||    
T  30617962 taaaagggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcctt-----taaaaaaatttagattttgtccctgtaatttcata 30618056  T
Q  331 ttcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    || |||||||| ||||||||| ||  | ||||| |||| ||||||||||    
T  30618057 ttgttccacttttggtccctccttttatcacgtcagcagaatctgcata 30618105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 3230220 - 3230129
Alignment:
Q  256 ccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtc 347  Q
    ||||||||||||||||||||||| |||||||||||||         |||||||||||||||| | ||||||||||||||| ||||| |||||    
T  3230220 ccatgtaatattagcgaattccgattttagtccctgtaaaataaaagatttagattttgtccatataatttcatattctttcacttttggtc 3230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 18500707 - 18500655
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtcc 288  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  18500707 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 338
Target Start/End: Original strand, 9154884 - 9154982
Alignment:
Q  241 aatacctcttttcgtccatgtaatatt-agcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcca 338  Q
    ||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||         |||||||||||||||| |||||||||| |||||||||    
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 9154982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 2299340 - 2299396
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||  | |||||||| |||||||||||||||||||||||||||||||||||    
T  2299340 gggtaaatattttttttcgtctatgtaatattagcgaattccggttttagtccctgt 2299396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 2299691 - 2299635
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||| |||||||||| | |||||||||||||||||||||||||||| |||||    
T  2299691 gggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 379
Target Start/End: Original strand, 33637625 - 33637702
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||||||||||| |||||||||| | |||||||||||| ||||||||| || ||  |||| |||| ||||||||||    
T  33637625 gatttagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtcagcagaatctgcata 33637702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 292
Target Start/End: Original strand, 34884558 - 34884613
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||| |||||||||||| ||||||||||| ||||| |||||||| |||||||    
T  34884558 ggtaaatatctcttttcgtccttgtaatattagtgaatttcggttttaatccctgt 34884613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 21069513 - 21069570
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||| ||||||  |||| |||| |||||||| |||||||||||||||||||||||||    
T  21069513 tgggttaatacccattttagtccctgtaatatgagcgaattccggttttagtccctgt 21069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 3230059 - 3230019
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  3230059 gtccttgtaatttcatattcctccacttttggtccctcatt 3230019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 24732007 - 24732053
Alignment:
Q  305 ttagattttgtccttgtaatttcatattcttccacttgtggtccctc 351  Q
    ||||||||||||| |||||||||| ||||||| |||| |||||||||    
T  24732007 ttagattttgtccctgtaatttcagattcttctacttttggtccctc 24732053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 17142744 - 17142788
Alignment:
Q  303 atttagattttgtccttgtaatttcatattcttccacttgtggtc 347  Q
    ||||||||| ||||| |||||||||| |||||||||||| |||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtc 17142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 21070915 - 21070859
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||| ||||| |||| |||||||| ||||||||||||| |||||| ||||    
T  21070915 gggttaataccccttttagtccctgtaatatgagcgaattccggtattagtctctgt 21070859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 39711450 - 39711280
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||         ||||||||||||||||  ||||||||||||||||    
T  39711450 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattctt 39711351  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  39711350 ccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaa 39711280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 17606684 - 17606516
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||| ||||||    
T  17606684 gggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaa--gatttagattttgtccttgtaatttcagattctt 17606587  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||    
T  17606586 ccacttttggtcccttattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaa 17606516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 39826050 - 39826220
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||||| ||||||||||||||| || |||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  39826050 gggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 39826149  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  39826150 ccacttttgatccctcattccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaa 39826220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 4906962 - 4907132
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||| ||||||  ||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  4906962 gggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattctt 4907061  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| ||||||||||||||||||||| |||  ||||||||||||||| | |||||||||||||| ||||    
T  4907062 ccacttttggtccctcattccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaaaa 4907132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 33628690 - 33628860
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||         ||||||||||||||||  ||||||||| ||||||    
T  33628690 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattctt 33628789  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
     ||||| ||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||    
T  33628790 tcacttttggtccctcattccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaaaa 33628860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 30299610 - 30299439
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||| ||||||||  |||||||||||| |||| |||||||||| |||||         |||||||||||||||| |||||||| | |||||    
T  30299610 tgggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattct 30299511  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||    
T  30299510 tccacttttggtccctcattccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaa 30299439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 235 - 398
Target Start/End: Complemental strand, 24468003 - 24467843
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||         |||||||||||||||| |||||||||| |||||    
T  24468003 tgggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 24467907  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagg 398  Q
    ||||||| |||||||||||| |||||||| || | ||||||||||||||| |||||||||||||    
T  24467906 tccacttttggtccctcatttcaccacgtcagtagaatctgcatacatggcacgtaaaatgagg 24467843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 34749138 - 34749307
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||| ||||||| ||| |||||||||||||||||| | ||||||||||| |         ||||||||||||||||  ||||||||||||||||    
T  34749138 gggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaa-gatttagattttgtccccgtaatttcatattctt 34749236  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||||    
T  34749237 ccacttttggtccctcattccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaa 34749307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 234 - 406
Target Start/End: Original strand, 52058009 - 52058181
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||  ||||         |||||||| | ||||| |||||||||| ||||    
T  52058009 atgggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattc 52058108  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| |||||||||||| |||||| | |||| ||||||||||||||  |||||||||||||||||||||    
T  52058109 ttccacttttggtccctcatttcaccacatcagcagaatctgcatacatgacacgtaaaatgagggaccaaaa 52058181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 25549407 - 25549323
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25549407 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 25549323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 39970645 - 39970816
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||||||||||||| |||||| |  ||||| || ||||          |||||||||||||||  |||||||||| |||||    
T  39970645 gggtaaatacctcttttcgtccatgtaatattaacgaatttcaattttaatctctgtaaaaaaaaaagatttagattttgtctatgtaatttcagattct 39970744  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  39970745 tccacttttggtccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaa 39970816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 48072339 - 48072169
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||          ||||||||| ||||| |||||||||||||||||    
T  48072339 gggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattctt 48072240  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||  ||||||| |||||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  48072239 ccacttttgggtcctcatttcaccacgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaa 48072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 29696935 - 29696771
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||          ||| ||||||||||| |||||||||| ||||||    
T  29696935 gggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatt-agattttgtccatgtaatttcagattctt 29696837  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| |||||||||     | |||||||||||||||||||||    
T  29696836 ccacttttggtccctcattccaccacgtaagcagaatctgcat-----gcacgtaaaatgagggaccaaaa 29696771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 236 - 401
Target Start/End: Complemental strand, 8293186 - 8293020
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||| | |||||||| |||||||  ||||||||||||||          |||||||||||||||| ||||||||||||||||    
T  8293186 gggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 8293087  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggac 401  Q
    ||||||| |||||||||||||||||| || |||  ||||||||||||||| | | ||||||||||||    
T  8293086 tccacttttggtccctcattccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggac 8293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 20996045 - 20995877
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||||||||||| |||| |||||||||||||||||   |||||||||| |||         |||||||||||||||  |||||||||||||||||    
T  20996045 gggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaa-gatttagattttgtctctgtaatttcatattctt 20995947  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| |||| ||||||||||||||| |||| ||||||||||||||||    
T  20995946 ccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgt-aaatgagggaccaaaa 20995877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 235 - 379
Target Start/End: Original strand, 39711073 - 39711215
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  39711073 tgggtaaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccttgtaatttcatattct 39711170  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||| ||||||||| ||  | ||||| |||| ||||||||||    
T  39711171 tccacttttggtccctcctttaatcacgtcagcagaatctgcata 39711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 259 - 406
Target Start/End: Original strand, 42510038 - 42510184
Alignment:
Q  259 tgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccac 358  Q
    |||||||||||||||||||||||||| |||||||          ||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||    
T  42510038 tgtaatattagcgaattccggttttaatccctgtaaaaaaata-atttagattttgtccctgtaatttcatattcttccacttttagtccctcatttcac 42510136  T
Q  359 cacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||| | |||| ||||||||||||||| |||| ||||||||||||||||    
T  42510137 cacatcagcagaatctgcatacatggcacgtgaaatgagggaccaaaa 42510184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 235 - 348
Target Start/End: Complemental strand, 39826425 - 39826312
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||||||| |||||||||| |||||    
T  39826425 tgggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattct 39826326  T
Q  335 tccacttgtggtcc 348  Q
    ||||||| ||||||    
T  39826325 tccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 13230111 - 13229939
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccct-gtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    ||||||||||||||||||||||  || |||||||||||||| ||||||||||| || ||          | |||||||||| |  | ||||||||| |||    
T  13230111 tgggtaaatacctcttttcgtctctgaaatattagcgaatttcggttttagtctcttgtaaaaaaaaaaaattagattttgcctctttaatttcatcttc 13230012  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||    
T  13230011 ttccacttttggtccctcattccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaa 13229939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 368
Target Start/End: Complemental strand, 18342399 - 18342265
Alignment:
Q  232 aaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatat 331  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||          ||||| ||||| | |||||||||||||||    
T  18342399 aaatgggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttaaattttattcttgtaatttcatat 18342302  T
Q  332 tcttccacttgtggtccctcattccaccacgtaagca 368  Q
    |||||||||| | ||||||||||||||||||||||||    
T  18342301 tcttccacttttagtccctcattccaccacgtaagca 18342265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 23198119 - 23198203
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  23198119 gcacctaatatagcaatattttacttgattttgtgtttattggcgtttaggtatatgattttcaatattagggtaatttgtaaat 23198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 398
Target Start/End: Complemental strand, 18462658 - 18462500
Alignment:
Q  240 aaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccac 339  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||| | |||         ||||||||||||||||  ||||||||| ||||||||||    
T  18462658 aaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattcttccac 18462559  T
Q  340 ttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagg 398  Q
    || ||||| |||||| |||||||| | || ||||||||||||||| ||| |||||||||    
T  18462558 ttttggtctctcatttcaccacgtcaacagaatctgcatacatggcacgcaaaatgagg 18462500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 235 - 379
Target Start/End: Original strand, 8292803 - 8292947
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||| |||||||||||| |||| ||||||||||| |||||||||||||||||         |||||||||||||||| || |||||||||||||    
T  8292803 tgggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattct 8292902  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||| |||| |||| || || ||||| |||| ||||||||||    
T  8292903 tccacttttggttcctcttttcatcacgtcagcagaatctgcata 8292947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 226 - 351
Target Start/End: Original strand, 18462276 - 18462400
Alignment:
Q  226 atttgtaaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatt 325  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||    
T  18462276 atttataaaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatt 18462374  T
Q  326 tcatattcttccacttgtggtccctc 351  Q
    ||| ||||||||| || |||||||||    
T  18462375 tcagattcttccatttttggtccctc 18462400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25549576 - 25549504
Alignment:
Q  1 gaagcgaaaatggagattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctc 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  25549576 gaagcgaaaatggagattcttctccgatctccgccgtgacttttctccgatctacatcgcgcttcttcttctc 25549504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 43539725 - 43539555
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||| |||||||||||| |||||||||||| ||||||||||||||| |||||          |  | |||||||||| |||||||||| ||||||    
T  43539725 gggttaatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgtaaaaaaaaaaaaattgattttgtccatgtaatttcaaattctt 43539626  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||| || |||||||| |||||||||||| |||  ||||||||||||||  ||||||||||||| |||||||    
T  43539625 ccagttttggtcccttattccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaa 43539555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 4907340 - 4907197
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| || ||||| ||| ||||||||||||||||||| ||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| || || ||||| || | ||||||||||    
T  4907240 ccacttttggtccctcctttcatcacgtcagtagaatctgcata 4907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 239 - 375
Target Start/End: Original strand, 17606307 - 17606447
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt----nnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||             |||||||||||||| | ||||||||||||||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctg 375  Q
    ||||||| |||||||||||| || ||||| |||| ||||||    
T  17606407 tccacttttggtccctcatttcatcacgtcagcagaatctg 17606447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 351
Target Start/End: Original strand, 48071957 - 48072076
Alignment:
Q  232 aaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatat 331  Q
    |||||||| |||| |||||||||| |||||||||||||||||||| ||||||||| |||||         |||||||||||||||| |||||||||||||    
T  48071957 aaatgggttaatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatat 48072056  T
Q  332 tcttccacttgtggtccctc 351  Q
    | |||||||| || ||||||    
T  48072057 tattccacttttgctccctc 48072076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 52058386 - 52058271
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||||||||  ||||||||| |||||         |||||||||| ||||| |||||||||| ||||||    
T  52058386 gggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattctt 52058287  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  52058286 ccacttttggtccctc 52058271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 24467629 - 24467743
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  24467629 gggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagattctt 24467727  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  24467728 ccacttttggtccctc 24467743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 379
Target Start/End: Complemental strand, 39971025 - 39970880
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||          |||||||||||||||| |||||||| | || |    
T  39971025 tgggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatcc 39970926  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||||| ||||||||  || || ||||| |||| |||| |||||    
T  39970925 ttccacttttggtcccttctttcatcacgtcagcagaatccgcata 39970880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 379
Target Start/End: Original strand, 43539349 - 43539490
Alignment:
Q  238 gtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcc 337  Q
    ||||||| |||||||| ||||||||| |||||| ||||||| ||||||||| |||         |||||||||||||||| |||||||| ||||| ||||    
T  43539349 gtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattgttcc 43539448  T
Q  338 acttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||| ||||||||| || || ||||| |||| ||||||||||    
T  43539449 acttttggtccctcctttcatcacgtcagcagaatctgcata 43539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 29696565 - 29696669
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||         ||||||||||||||||  ||||||||||||||||    
T  29696565 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgt-aaaaaaaagatttagattttgtccccgtaatttcatattctt 29696663  T
Q  336 ccactt 341  Q
    ||||||    
T  29696664 ccactt 29696669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 30252278 - 30252152
Alignment:
Q  236 gggtaaatacctcttttc--gtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||||||||| |  |||| | |||||||||||||||| |||||||||||||||         ||||||||||||||||  ||||||||||||||    
T  30252278 gggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatattc 30252179  T
Q  334 ttccacttgtggtccctcattccacca 360  Q
    ||||| || || |||||||||||||||    
T  30252178 ttccatttttgatccctcattccacca 30252152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 347
Target Start/End: Original strand, 30299232 - 30299342
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||| | || ||||||||| |||         |||||||||||||||| |||||||||||||||||    
T  30299232 gggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 30299330  T
Q  336 ccacttgtggtc 347  Q
    |||||| |||||    
T  30299331 ccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 351
Target Start/End: Complemental strand, 33629068 - 33628953
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||          | || |||||||||| |||||||||| ||||||    
T  33629068 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattctt 33628969  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  33628968 ccacttttggtccctc 33628953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 23197975 - 23198045
Alignment:
Q  5 cgaaaatggagattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctctgcgg 78  Q
    ||||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23197975 cgaaaatggcgattcttc---gatctccgccgtgacttttctccgatctacaccgcgcttcttcttctctgcgg 23198045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 379
Target Start/End: Complemental strand, 34749484 - 34749340
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||| |||  |||||||||| ||||||||| ||||||||| |||         |||||||||||| ||| |||||||||| |||||    
T  34749484 tgggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattct 34749385  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||| |||| |||| ||  | ||||| |||| ||||||||||    
T  34749384 tccacttttggtacctcctttaatcacgtcagcagaatctgcata 34749340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 406
Target Start/End: Original strand, 7473862 - 7473962
Alignment:
Q  306 tagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaa 405  Q
    |||||| ||||  ||||||||||||||||||||||| |||||||||||| |||||||| |  | ||||||||||||||| |||| |||||| ||| ||||    
T  7473862 tagattatgtctctgtaatttcatattcttccacttttggtccctcatttcaccacgtcaaaagaatctgcatacatggcacgtgaaatgatggatcaaa 7473961  T
Q  406 a 406  Q
    |    
T  7473962 a 7473962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 20995698 - 20995754
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  20995698 gggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 379
Target Start/End: Complemental strand, 16294312 - 16294182
Alignment:
Q  249 ttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtcc 348  Q
    |||| ||| ||||||||||||| |||| || |||||||||||||          ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  16294312 ttttggtctatgtaatattagcaaatttcgattttagtccctgtaaaataaaaaatttagattttgtccttgtaatttcatattcctccacttttggtcc 16294213  T
Q  349 ctcattccaccacgtaagcataatctgcata 379  Q
    || |||  |||| || |||| ||||| ||||    
T  16294212 cttatttaaccatgtcagcagaatctacata 16294182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 31774451 - 31774375
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    ||||||||||||| ||| | ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  31774451 gcacctaatatagtgatttcttacttgattttgtgttt--------ttagatctatgattttcaatattaggttaatttgtaaat 31774375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 27039638 - 27039690
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtcc 288  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  27039638 gggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtcc 27039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 379
Target Start/End: Complemental strand, 42510388 - 42510249
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattcttccac 339  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||||| |||           ||||||||| |  || | |||||||| ||||||||||    
T  42510388 aataccacttttggtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaaaaatttagattctacccctataatttcagattcttccac 42510289  T
Q  340 ttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||  ||||||||| || ||||| |||| ||||||||||    
T  42510288 ttgtattccctcatttcatcacgtcagcagaatctgcata 42510249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 17502108 - 17502053
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccct 290  Q
    ||||| |||| | ||||| |||| ||||||||||||||||||||||||||||||||    
T  17502108 tgggttaatatcacttttggtccttgtaatattagcgaattccggttttagtccct 17502053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 31774608 - 31774550
Alignment:
Q  15 gattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctc 73  Q
    ||||||||||||||||||||||||| ||||||  | |||||| | ||||||||||||||    
T  31774608 gattcttctccgatctccgccgtgatttttcttcggtctacatctcgcttcttcttctc 31774550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 37236723 - 37236772
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccct 290  Q
    |||| ||||||| |||| |||||||| |||||||||||||||||||||||    
T  37236723 aatatctcttttggtccctgtaatatgagcgaattccggttttagtccct 37236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 13229803 - 13229875
Alignment:
Q  307 agattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| || || || || | |||||||||||||    
T  13229803 agattttgtgcttgtaatttcatattcttccacttttgatcactcctttcatcaagtcaacataatctgcata 13229875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 17500769 - 17500825
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| ||||||  |||| |||| ||||||||||||||||||||||||||||| ||||    
T  17500769 gggttaataccatttttggtccctgtaatattagcgaattccggttttagtctctgt 17500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 43400753 - 43400809
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| ||||||||||||||||  | |||||| |||||||||||||||| ||||||||    
T  43400753 gggttaatacctcttttcgtctctataatatgagcgaattccggttttggtccctgt 43400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 215223 - 215191
Alignment:
Q  303 atttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||||||| ||||||    
T  215223 atttagattttgtccttgtaatttcagattctt 215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 26271263 - 26271207
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||||||||| ||||  |||||||||||||| | ||||||| ||||||||    
T  26271263 gggttaatacctcttttagtcccagtaatattagcgaaattcggttttggtccctgt 26271207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 52058207 - 52058167
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    |||||||||||||||||||  ||||||| ||||||||||||    
T  52058207 gtccttgtaatttcatattactccacttttggtccctcatt 52058167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 1e-54; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 23806331 - 23806160
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||         |||||||||||||||| ||||||||||||||||    
T  23806331 tgggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23806232  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| ||||||||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||    
T  23806231 tccacttttggtccctcattccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaa 23806160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 236 - 407
Target Start/End: Complemental strand, 17463469 - 17463298
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||         |||||||||||||||| ||||||| |||||||||    
T  17463469 gggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattctt 17463370  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaat 407  Q
    |||||| || ||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||||||||||    
T  17463369 ccacttttgatccctcattccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggaccaaaat 17463298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 235 - 406
Target Start/End: Original strand, 30390458 - 30390629
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||          | ||||||||||||| ||||||||||||||||    
T  30390458 tggggaaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattct 30390557  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||    
T  30390558 tccacttttggtccctcattccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaa 30390629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 26236472 - 26236303
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||          |||||||||||||||| |||||||||| ||||||    
T  26236472 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttg-gaaaaaaaagatttagattttgtccctgtaatttcagattctt 26236374  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||| || |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  26236373 ccatttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 26236303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 19251847 - 19251678
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||         |||||||||| |||||||||||||||||||||||    
T  19251847 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattctgtccttgtaatttcatattctt 19251749  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||  ||||||||||| |||||||| |||| ||||||||||||||| ||||||||||| |||||||||    
T  19251748 ccactttcggtccctcatttcaccacgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaa 19251678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 15106444 - 15106275
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||||||||  |||||||||||||||| || |||||||||||||          ||||||||||||||| |||||||||| |||||    
T  15106444 tgggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcagattct 15106347  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| || |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  15106346 tccacttttgatccctcattccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaaaa 15106275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 235 - 406
Target Start/End: Original strand, 17850586 - 17850756
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |         |||||||||||||||  |||||||| | |||||    
T  17850586 tgggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaa-gatttagattttgtctctgtaatttaagattct 17850684  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| || |||||||||||||||||| |||| |||||||||||||||||| |||||||||||| |||||    
T  17850685 tccacttttgatccctcattccaccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaa 17850756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 235 - 406
Target Start/End: Original strand, 42670716 - 42670889
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngat--ttagattttgtccttgtaatttcatatt 332  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||          |   ||||||||||||||||||||||||||||    
T  42670716 tgggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaaaaaaaaaaaaaattagattttgtccttgtaatttcatatt 42670815  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||||| |||||||| |||||||||||| |||| ||| ||| ||||||| |||||||||||||||||||||    
T  42670816 cttccacttttggtcccttattccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaaaa 42670889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 26136196 - 26136025
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattc 333  Q
    ||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||          ||||||||||||||| ||||||||||||||||    
T  26136196 tgggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc-tgtaaaaaaaaaagatttagattttgtcattgtaatttcatattc 26136098  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| || || ||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||    
T  26136097 ttccacttttgatctctcgttccatcacgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaa 26136025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 235 - 406
Target Start/End: Original strand, 22263191 - 22263361
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||| ||||| ||||||| ||| ||||||||||| |||||| |||||||||| || |         |||||||||||||||| ||||||||||||||||    
T  22263191 tgggttaatacatcttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaa-gatttagattttgtccctgtaatttcatattct 22263289  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  22263290 tccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 22263361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 5599483 - 5599403
Alignment:
Q  155 ctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5599483 ctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 5599403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 26560556 - 26560724
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||| |||||||||||| |||||||||| |||||| || |||||||||||||         ||||||||||| |||| |||||||||| ||||||    
T  26560556 gggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaa--gatttagatttagtccctgtaatttcagattctt 26560653  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  26560654 ccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaa 26560724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5599633 - 5599556
Alignment:
Q  1 gaagcgaaaatggagattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctctgcgg 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  5599633 gaagcgaaaatggagattcttctccgatctccgccgtgacttttctccgatctacaccgcgcttcttcttatctgcgg 5599556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 17850964 - 17850822
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||         | |||||||||||||| |||||||||| ||||||    
T  17850964 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattctt 17850865  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| ||||||||| || || ||||| |||| |||||||||    
T  17850864 ccacttttggtccctcttttcatcacgtcagcaaaatctgcat 17850822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 22263571 - 22263426
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn--gatttagattttgtccttgtaatttcatattc 333  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||           |||| ||||||||||| |||||||||||||||    
T  22263571 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattc 22263472  T
Q  334 ttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||||| ||||||||| || || ||||| |||||||||||||||    
T  22263471 ttccacttttggtccctcctttcatcacgtcagcataatctgcata 22263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 239 - 406
Target Start/End: Complemental strand, 13254811 - 13254644
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattcttcc 337  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||          |||||| ||||  |||| ||||||||| ||||||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaatttaatcct-gtaatttcagattcttcc 13254713  T
Q  338 acttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| |||||||||||| |||||| |||||| |||| | |||||||  |||||||||||||||||||||    
T  13254712 acttttggtccctcatttcaccacataagcagaatcagtatacatgacacgtaaaatgagggaccaaaa 13254644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 19251471 - 19251585
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  19251471 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctt 19251569  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  19251570 ccacttttggtccctc 19251585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 20499123 - 20498953
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||| ||||| ||  || ||||||| | |||||||||||||||| ||||         |||||||||||||||| |||||||||| ||||||    
T  20499123 gggtaaatacctattttcatctctgaaatattaacaaattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 20499024  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
     ||||| |||||| ||||| |||||| | |||| ||||||||||||| | ||||||||||||||| |||||    
T  20499023 tcacttttggtccttcatttcaccacatcagcagaatctgcatacatagcacgtaaaatgagggatcaaaa 20498953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 23854687 - 23854793
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||         |||||||||||||||| ||||||||||||||||    
T  23854687 tgggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23854786  T
Q  335 tccactt 341  Q
    |||||||    
T  23854787 tccactt 23854793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 379
Target Start/End: Complemental strand, 42671098 - 42670954
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||||||||| |||| |||| |||||||||||| | ||||||||||||||         |||||||||| ||||| |||||||||||||| |    
T  42671098 tgggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatatttt 42670999  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||| ||||||||| || || ||||| |||| ||||||||||    
T  42670998 tccacttttggtccctcctttcatcacgtcagcagaatctgcata 42670954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 26236127 - 26236270
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||         |||||| ||||||||| |||||||||| ||||||    
T  26236127 gggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattctt 26236226  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
     ||||| ||||||||| || || ||||| |||| ||| ||||||    
T  26236227 tcacttttggtccctcctttcatcacgtcagcagaatttgcata 26236270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 33290425 - 33290257
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||||| ||||| |||| |||||||||||||||||| ||||||| |||||||          | |||||||||| ||||||||||||||||||||    
T  33290425 gggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaa--aattagattttgaccttgtaatttcatattctt 33290328  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| ||| |||||||| |  | |||||||||||||||  | | ||||||||||||||||    
T  33290327 ccacttttggtccctaatttcaccacgtcaaaaaaatctgcatacatggctcatgaaatgagggaccaaaa 33290257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 247 - 351
Target Start/End: Original strand, 26135828 - 26135932
Alignment:
Q  247 tcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggt 346  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||         |||||||||||||||| |||||||||| ||||||| |||| ||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  347 ccctc 351  Q
    |||||    
T  26135928 ccctc 26135932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 379
Target Start/End: Complemental strand, 26560932 - 26560789
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||           | ||||||||||||| | |||||||||||||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtcccggtaaaaaaaaaaaaattagattttgtccatataatttcatattctt 26560833  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||| ||| || || ||||| |||| ||||||||||    
T  26560832 ccacttttggtctctcctttcatcacgtcagcagaatctgcata 26560789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 378
Target Start/End: Original strand, 15106067 - 15106209
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| ||||||||||||  |||||||||||||||| |||||||| |||||||         |||||||||||||||| |||||||| | ||| ||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattatt 15106166  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| ||||||||| || || ||||| |||  |||||||||    
T  15106167 ccacttttggtccctcctttcatcacgtcagctaaatctgcat 15106209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 379
Target Start/End: Original strand, 33290062 - 33290192
Alignment:
Q  249 ttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtcc 348  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||          ||||||||| |||||||||||||||||| || ||||||| ||||||    
T  33290062 ttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaaatttagattctgtccttgtaatttcatactcctccacttttggtcc 33290161  T
Q  349 ctcattccaccacgtaagcataatctgcata 379  Q
    || |||  ||||||| |||| ||||||||||    
T  33290162 cttatttaaccacgtcagcagaatctgcata 33290192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 312 - 406
Target Start/End: Original strand, 13284484 - 13284578
Alignment:
Q  312 ttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| ||||||||||||||||||||||| | |||||||||| |||||||  | || ||||||||||||||  |||| ||||||||||||||||    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctcatttcaccacgacaacagaatctgcatacatgacacgtgaaatgagggaccaaaa 13284578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 13254497 - 13254612
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||| ||| | |||||||||||||||||  ||||||| |||||||         ||||||||||||||||||||||||||| ||||||    
T  13254497 gggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattctt 13254596  T
Q  336 ccacttgtggtccctc 351  Q
     ||||| |||| ||||    
T  13254597 tcacttttggttcctc 13254612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 20498747 - 20498803
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  20498747 gggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgt 20498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 23855073 - 23855025
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggtttt 283  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23855073 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 339
Target Start/End: Original strand, 34548573 - 34548676
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||| ||||||||||| ||||||||||| |||||  |||||||||||||||         |||||||||||||||| |||||||||||||| |    
T  34548573 tgggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaagatttagattttgtccatgtaatttcatattgt 34548671  T
Q  335 tccac 339  Q
    |||||    
T  34548672 tccac 34548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 39878103 - 39878245
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||          ||||||||| |||   |||||||||| ||||||    
T  39878103 gggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattctt 39878201  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||| ||| || || || || |||| ||||||||||    
T  39878202 ccacttttggtcactcctttcatcaagtcagcaaaatctgcata 39878245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 406
Target Start/End: Complemental strand, 39878402 - 39878310
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||| |||||||||| ||| || ||||| |||||||||||| |||||||  |||| |||||||||| |||  |||||||||||||||||||||    
T  39878402 gtccctgtaatttcagattttttcacttttggtccctcatttcaccacgccagcagaatctgcatatatgacacgtaaaatgagggaccaaaa 39878310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 23046707 - 23046812
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||| || |          ||||||||| ||||| |||||||||| ||||||    
T  23046707 gggtaaatacctcttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattctt 23046806  T
Q  336 ccactt 341  Q
    ||||||    
T  23046807 ccactt 23046812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 379
Target Start/End: Original strand, 17463091 - 17463234
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||||||||||| ||||          | ||||||||||||| ||||||||||  ||||    
T  17463091 tgggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaa-aattagattttgtccctgtaatttcaggttct 17463189  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
     |||||| |||||||||||| || || || | || ||||||||||    
T  17463190 cccacttttggtccctcatttcatcaagtcaacagaatctgcata 17463234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 379
Target Start/End: Complemental strand, 23854977 - 23854901
Alignment:
Q  303 atttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||||||||||  |||||||| |||||||||||||| ||||||||| || || ||||| |||| ||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatcacgtcagcagaatctgcata 23854901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 341
Target Start/End: Complemental strand, 44099001 - 44098895
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||| |||||||||||| |||||||| ||||||||| |||||| || |||||          ||||||||| ||||| |||||||||| |||||    
T  44099001 tgggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattct 44098902  T
Q  335 tccactt 341  Q
    |||||||    
T  44098901 tccactt 44098895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 290
Target Start/End: Complemental strand, 12419100 - 12419046
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccct 290  Q
    |||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  12419100 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 290
Target Start/End: Complemental strand, 12431160 - 12431106
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccct 290  Q
    |||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  12431160 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 30958682 - 30958740
Alignment:
Q  234 atgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||| |||||| ||||| |||| ||||||||||||||||| ||||||||||||||||    
T  30958682 atgggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccctgt 30958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 341
Target Start/End: Complemental strand, 30960049 - 30959945
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||||| ||||| |||| |||||||||||||||||||||||||||||| |||         | |||||||| ||||| ||||||||||||||| |    
T  30960049 gggttaataccacttttggtccctgtaatattagcgaattccggttttagtccatgtaaaaaaaaag-tttagattatgtccctgtaatttcatattcct 30959951  T
Q  336 ccactt 341  Q
    ||||||    
T  30959950 ccactt 30959945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 13284716 - 13284659
Alignment:
Q  306 tagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgt 363  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||||  |||||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgt 13284659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 39878451 - 39878395
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||    
T  39878451 tgggtaaatacctctttttgtcc-tgtaatattagcgaattccagttttcgtccctgt 39878395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 23047960 - 23047904
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||||||  |||||||    
T  23047960 gggtaaatacctattttcgtccctgtaatatgagcgaattccggttttgctccctgt 23047904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 13284792 - 13284735
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||| |||||  ||||| |||| ||||||||||||||||| ||||||||||||||||    
T  13284792 tgggttaatactgcttttggtccctgtaatattagcgaatttcggttttagtccctgt 13284735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 370 - 406
Target Start/End: Original strand, 23854800 - 23854836
Alignment:
Q  370 aatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23854800 aatctgcatacatggcacgtaaaatgagggaccaaaa 23854836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 44999354 - 44999398
Alignment:
Q  238 gtaaatacctcttttcgtccatgtaatattagcgaattccggttt 282  Q
    |||||||  |||||||||||||||||||||||||||||| |||||    
T  44999354 gtaaatatatcttttcgtccatgtaatattagcgaattctggttt 44999398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 44999481 - 44999435
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtcc 288  Q
    |||||||||||||||| ||||||||||||||||||| | |||||||||    
T  44999481 aatacctcttttcgtc-atgtaatattagcgaattctgattttagtcc 44999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 354
Target Start/End: Original strand, 36359111 - 36359161
Alignment:
Q  304 tttagattttgtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    ||||||||||||||||||||| |||||| ||||||||| |  |||||||||    
T  36359111 tttagattttgtccttgtaatatcatatacttccactttttatccctcatt 36359161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 13284412 - 13284461
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttag 285  Q
    |||| |||||| ||||| |||| |||||||| ||||||||||||||||||    
T  13284412 gggttaataccactttttgtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 23806022 - 23806095
Alignment:
Q  306 tagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||||| || |||||||| | |||||||||||| ||||||||| || || ||||| |||| |||| |||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttcatcacgtcagcagaatccgcata 23806095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 26236277 - 26236317
Alignment:
Q  314 gtccttgtaatttcatattcttccacttgtggtccctcatt 354  Q
    |||| ||||||||||||||| ||||||| ||||||||||||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccctcatt 26236317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 10108748 - 10108578
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  10108748 gggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108649  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  10108648 ccacttttggtcccttattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 10108578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 14820672 - 14820502
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  14820672 gggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820573  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||| |||||||||||| |||| ||||||||||||||   ||||||||||||||||||||    
T  14820572 ccacttttggtcccttattccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaaaa 14820502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 231 - 406
Target Start/End: Original strand, 43851660 - 43851834
Alignment:
Q  231 taaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcata 330  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||| |    
T  43851660 taaatgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaa-gatttagattttgtccctgtaatttcaga 43851758  T
Q  331 ttcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||||||| || |||||||||||||||| | |||| ||||||||||||||  ||||||||||||||| |||||    
T  43851759 ttcttccacttttgatccctcattccaccacatcagcagaatctgcatacatgacacgtaaaatgagggatcaaaa 43851834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 7689901 - 7689731
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||         |||||| ||||||||| |||||||||| ||||||    
T  7689901 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattctt 7689802  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| || |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||    
T  7689801 ccacttttgatccctcattccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaa 7689731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 5555239 - 5555077
Alignment:
Q  244 acctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgt 343  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||||         |||||||||||||||| ||||||||||||||||||||||| |    
T  5555239 acctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccactttt 5555140  T
Q  344 ggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| ||||||||| || |||| |||||||||| |||| |||||||||||||||||||||    
T  5555139 ggtcccttattccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggaccaaaa 5555077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 21147936 - 21148107
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||          |||||||||||||||| |||||||||| |||||    
T  21147936 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 21148035  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||| |||||||||||| |||| |||||||||| |||  |||||||||||||||||||||    
T  21148036 tccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaa 21148107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 17622890 - 17623057
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||         |||||||||||||| || ||||||| | ||||||    
T  17622890 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgtaaaaaaa--gatttagattttgttct-gtaattttagattctt 17622986  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| ||||||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||    
T  17622987 ccacttttggtccctcattccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaa 17623057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 10108370 - 10108513
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||||||||||    
T  10108370 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108469  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| || || ||||| |||| ||||||||||    
T  10108470 ccacttttggtccctcctttcatcacgtcagcagaatctgcata 10108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 10628510 - 10628426
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628510 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 10628426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 26137062 - 26136893
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccct-gtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||| |||||||||| ||||||||||| ||||| | |||||||||||| ||          | ||||||||||||| |||||||||| |||||    
T  26137062 gggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaa--aattagattttgtccctgtaatttcagattct 26136965  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  26136964 tccacttttggtccctcattccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 26136893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 40637731 - 40637647
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40637731 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaaat 40637647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 21119361 - 21119279
Alignment:
Q  151 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaa 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21119361 gcacctaatatagcgatattttacttgattttgtgtttattggcgtttagatctatgattttcaatattaggttaatttgtaa 21119279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 42606131 - 42605961
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| ||||||| |||| |||||||||||||||||| ||||||||||  |||         ||||||||||||||||  ||||||||| ||||||    
T  42606131 gggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattctt 42606032  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||| | ||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||    
T  42606031 ccacttttggtccattattccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaa 42605961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 240 - 406
Target Start/End: Complemental strand, 22494757 - 22494592
Alignment:
Q  240 aaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccac 339  Q
    |||||||||| ||||||| |||||||| || |||||| ||||||||| || ||         |||||||| ||||||| |||||||||| ||||||||||    
T  22494757 aaatacctctcttcgtccctgtaatatcagtgaattctggttttagttcc-gtaaaaaaagagatttagaatttgtccctgtaatttcaaattcttccac 22494659  T
Q  340 ttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    || |||||||||||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||    
T  22494658 ttttggtccctcattccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggaccaaaa 22494592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 42112993 - 42113154
Alignment:
Q  244 acctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgt 343  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||         |||||||||| ||||| |||||||| | |||||| ||||| |    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttaagattctttcactttt 42113091  T
Q  344 ggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||||||| |||||||| |||| ||||||||||||||  || ||||||||||||||||||    
T  42113092 ggtccctcatttcaccacgtcagcagaatctgcatacatgacacataaaatgagggaccaaaa 42113154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40637881 - 40637804
Alignment:
Q  1 gaagcgaaaatggagattcttctccgatctccgccgtgacttttctctgatctacaccgcgcttcttcttctctgcgg 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40637881 gaagcgaaaatggagattcttctccgatctccgccgtgacttttctccgatctacaccgcgcttcttcttctctgcgg 40637804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 5554869 - 5555012
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||         |||| ||||||||||| | |||||||||||||||    
T  5554869 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattctt 5554968  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||  || || ||||| |||| ||||||||||    
T  5554969 ccacttttggtcccttctttcatcacgtcagcagaatctgcata 5555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 235 - 379
Target Start/End: Original strand, 14820294 - 14820437
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||         |||||||||||||||| ||||||||||||||||    
T  14820294 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgt-aaaaaaaagatttagattttgtccctgtaatttcatattct 14820392  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||||||| ||||||||| || || ||| | |||| ||||||||||    
T  14820393 tccacttttggtccctcctttcatcacatcagcagaatctgcata 14820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 247 - 406
Target Start/End: Original strand, 30789519 - 30789677
Alignment:
Q  247 tcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggt 346  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||         |||||||||||||||  |||||||||| |||| ||||||| || |    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtctctgtaatttcagattcctccacttttgat 30789617  T
Q  347 ccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||| |||||||| |||| ||||||||||||||| |||||| |||||||| |||||    
T  30789618 ccctcatttcaccacgttagcaaaatctgcatacatggcacgtaagatgagggatcaaaa 30789677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 236 - 400
Target Start/End: Original strand, 26532782 - 26532947
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||| |||| |  || |||||||||||||||||||||||||||| |||          |||||||||||||||| |||||||||| ||| |    
T  26532782 gggtaaatacctcatttcatatatataatattagcgaattccggttttagtccatgtaaaaaaaaaagatttagattttgtccctgtaatttcaaatttt 26532881  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgaggga 400  Q
    ||||||| || |||||||||||||||||| |||| ||||||||||||||  |||||||||||||||    
T  26532882 tccacttttgatccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgaggga 26532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 236 - 378
Target Start/End: Complemental strand, 30789885 - 30789743
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||||||         |||||||||||||||| |||||||||| ||||||    
T  30789885 gggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 30789786  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcat 378  Q
    |||||| |||||| || || || ||||| |||| |||||||||    
T  30789785 ccacttttggtccatcgtttcatcacgtcagcaaaatctgcat 30789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 21148314 - 21148171
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||          | |||||||||||||||||||||||||||||||    
T  21148314 gggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattctt 21148215  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| | ||||||| || || || || |||| ||||||||||    
T  21148214 ccacttttagtccctcctttcatcatgtcagcagaatctgcata 21148171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 236 - 374
Target Start/End: Complemental strand, 10171521 - 10171383
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||          ||||||||||||||| |||||||| | ||||||    
T  10171521 gggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctt 10171422  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatct 374  Q
     ||||| ||||||||||||||| || || |||| |||||    
T  10171421 tcacttttggtccctcattccatcatgtcagcagaatct 10171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 2583699 - 2583528
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||| ||||||||||||  |||||||||||||||||  ||||||| ||||||          |||||| ||||||||| | |||||||| |||||    
T  2583699 gggtaaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagattct 2583600  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    ||||||| |||| |||||||||||||| | |||  ||||||||||||||| | |||||||||||||| ||||    
T  2583599 tccacttttggttcctcattccaccacatcagccgaatctgcatacatggcatgtaaaatgagggactaaaa 2583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 14767573 - 14767677
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggac 401  Q
    |||||||||||||||| |||||||||| ||| |||||||| |||||||| |||||||||||| |||| |||||||||| |||  |||||||||||| |||    
T  14767573 gatttagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagac 14767672  T
Q  402 caaaa 406  Q
    |||||    
T  14767673 caaaa 14767677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 351
Target Start/End: Original strand, 7689524 - 7689638
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||         |||||||| |||||||||||||||||| ||||||    
T  7689524 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttaga-tttgtccttgtaatttcagattctt 7689622  T
Q  336 ccacttgtggtccctc 351  Q
    |||||| |||||||||    
T  7689623 ccacttttggtccctc 7689638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 379
Target Start/End: Complemental strand, 17623261 - 17623122
Alignment:
Q  239 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttcca 338  Q
    ||||||||||||||| ||| |||||||||||| ||||| ||||||||| |||||         ||||||||||||||||||||||||||| |||||||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaa-gatttagattttgtccttgtaatttcaaattcttcca 17623163  T
Q  339 cttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||| ||||| ||| || || ||||| |||| ||||||||||    
T  17623162 cttttggtcactcctttcatcacgtcagcagaatctgcata 17623122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 26136685 - 26136828
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| ||||||    
T  26136685 gggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattctt 26136784  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    ||| || || | |||| || || || || |||||||||||||||    
T  26136785 ccaattttgattcctcctttcatcaagtcagcataatctgcata 26136828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 18044206 - 18044153
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtcc 288  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18044206 tgggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 379
Target Start/End: Original strand, 2583319 - 2583463
Alignment:
Q  235 tgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||||||||||||| | | ||||||||||||||||| || ||||||| | |||         |||||||||||||||| |||||||||  |||||    
T  2583319 tgggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattct 2583418  T
Q  335 tccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    || |||| || |||||| || || ||||| |||| ||||||||||    
T  2583419 tctacttttgatccctcctttcatcacgtcagcagaatctgcata 2583463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 236 - 340
Target Start/End: Complemental strand, 43481693 - 43481588
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||          |||||| ||||||||| |||||||||| |||||    
T  43481693 gggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattct 43481594  T
Q  335 tccact 340  Q
    ||||||    
T  43481593 tccact 43481588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 35367410 - 35367466
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||| |||||||    
T  35367410 gggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 351
Target Start/End: Original strand, 42605759 - 42605868
Alignment:
Q  240 aaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccac 339  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||  ||||          | ||||||||| ||| |||||||||||||||||||||    
T  42605759 aaatacttcttttcgtccatgtaatattaacgaattccgattttagtttctgtaaaaaaaa--aattagattttatccctgtaatttcatattcttccac 42605856  T
Q  340 ttgtggtccctc 351  Q
    || |||||||||    
T  42605857 ttttggtccctc 42605868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 406
Target Start/End: Original strand, 43481408 - 43481484
Alignment:
Q  330 attcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||||||||| ||||| |||||||||||||| ||| | ||| ||||||||||| |||||||| |||||| |||||    
T  43481408 attcttccacttttggtctctcattccaccacgcaagtagaatttgcatacatggcacgtaaaacgagggatcaaaa 43481484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 379
Target Start/End: Complemental strand, 14767885 - 14767742
Alignment:
Q  233 aatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatatt 332  Q
    ||||||||||||||||||||||| | |||||||||||  |||| || |||||||||||||          | ||||||||||||| ||||||||||||||    
T  14767885 aatgggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcatatt 14767789  T
Q  333 cttccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||   ||||||| || || ||||| | || ||||||||||    
T  14767788 cttccagtttgtgtccctcttttcatcacgtcaacagaatctgcata 14767742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 10628664 - 10628608
Alignment:
Q  20 ttctccgatctcc---gccgtgacttttctctgatctacaccgcgcttcttcttctc 73  Q
    |||||||||||||   ||||||||||||||| |||||||||||||||||||||||||    
T  10628664 ttctccgatctccgccgccgtgacttttctccgatctacaccgcgcttcttcttctc 10628608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 290
Target Start/End: Complemental strand, 20877123 - 20877069
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccct 290  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  20877123 gggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 21119515 - 21119459
Alignment:
Q  20 ttctccgatctcc---gccgtgacttttctctgatctacaccgcgcttcttcttctc 73  Q
    |||||||||||||   ||||||||||||||| |||||||||||||||||||||||||    
T  21119515 ttctccgatctccgccgccgtgacttttctccgatctacaccgcgcttcttcttctc 21119459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 379
Target Start/End: Complemental strand, 21144865 - 21144740
Alignment:
Q  254 gtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccacttgtggtccctcat 353  Q
    |||| |||||||||| ||||||||| ||||||||||| |          |||||||||||||||||||||||||| |||| |||| || | |||||| ||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctataaaataaaaaatttagattttgtccttgtaatttcagattcctccatttttcgtcccttat 21144766  T
Q  354 tccaccacgtaagcataatctgcata 379  Q
    |  ||||||| |||| ||||||||||    
T  21144765 ttaaccacgtcagcagaatctgcata 21144740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 40487792 - 40487736
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||| ||||| |||| ||||||||||||||||||| ||||||||||||||    
T  40487792 gggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgt 40487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 42113359 - 42113303
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||| ||||||||||| |||||||||| |||||| |||||||||| |||||    
T  42113359 gggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgt 42113303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 341
Target Start/End: Original strand, 38726687 - 38726792
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||| ||||||  |||| |||| |||||||| ||| ||||||||||||||||||| |           ||||||||||||||||||||||||| ||||||    
T  38726687 gggttaataccctttttggtccctgtaatatgagcaaattccggttttagtccctataaaaaaaaaagtttagattttgtccttgtaatttcagattctt 38726786  T
Q  336 ccactt 341  Q
    ||||||    
T  38726787 ccactt 38726792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 1949652 - 1949708
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    |||| |||||||||||| |||| |||||||| | ||||||||||||||||| |||||    
T  1949652 gggttaatacctcttttggtccctgtaatatgatcgaattccggttttagtgcctgt 1949708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 14767506 - 14767559
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccc 289  Q
    |||| ||||||||||||| ||  |||||||||||||||||  ||||||||||||    
T  14767506 gggttaatacctcttttcatctctgtaatattagcgaattttggttttagtccc 14767559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 20875698 - 20875750
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtcc 288  Q
    |||| |||||||||||| |||| |||||||| ||| |||| ||||||||||||    
T  20875698 gggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtcc 20875750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 21144598 - 21144630
Alignment:
Q  260 gtaatattagcgaattccggttttagtccctgt 292  Q
    |||||||||| ||||||||||||||||||||||    
T  21144598 gtaatattagagaattccggttttagtccctgt 21144630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 94; Significance: 9e-46; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 237 - 406
Target Start/End: Original strand, 7227 - 7400
Alignment:
Q  237 ggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttc 336  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| ||||| |||||         |||||||||||||||| ||||||||||||||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 7326  T
Q  337 cacttgtggtccctcattccaccacgtaagcataat----ctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||  ||||||||||||||||||| ||||| |||    ||||||||||||||||||||||||||||||||||    
T  7327 cactttcggtccctcattccaccacggaagcaaaatctgactgcatacatggtacgtaaaatgagggaccaaaa 7400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 7578 - 7466
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttagattttgtccttgtaatttcatattct 334  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||          |||||||||||||||| |||||||||| |||||    
T  7578 gggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 7479  T
Q  335 tccacttgtggtc 347  Q
    || |||| |||||    
T  7478 tctacttttggtc 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 84; Significance: 9e-40; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 5124 - 4956
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||  ||          |||||||||| |||| |||||||| | ||||||    
T  5124 gggtaaatacc-cttttcgtccatgtaatattagcgaattccggtttttgtcctagtaaaaaaaat-atttagatttagtccctgtaattttagattctt 5027  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  5026 ccacttttggtccctcattccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaa 4956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 4880 - 4932
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtcc 288  Q
    ||||||||||||||||| || | ||||||||||||||||| ||||||||||||    
T  4880 gggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 84; Significance: 9e-40; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 236 - 406
Target Start/End: Original strand, 3869 - 4039
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||| ||||| |||||||||| ||||||    
T  3869 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattctt 3968  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||  ||||| |||||| ||||| || |||| |||||||| |||||| | |||||||||||||||||||    
T  3969 ccactgttggtcgctcatttcaccatgtcagcagaatctgcacacatggcaagtaaaatgagggaccaaaa 4039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 4247 - 4104
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||||| | ||||||| ||||||||||||| ||||| |  ||||| |||||||          ||||||||| |||  ||||||||||| ||||||    
T  4247 gggtaaatactttttttcgttcatgtaatattagagaatttcaattttaatccctgtaaaaaaaaatatttagattatgttgttgtaatttcagattctt 4148  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
     || || ||||||||| || || ||||| |||| ||||||||||    
T  4147 tcatttttggtccctcctttcatcacgtcagcagaatctgcata 4104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 236 - 406
Target Start/End: Complemental strand, 1784 - 1618
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |          | ||||||| |||||||||||||||| ||||||    
T  1784 gggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaa----aattagattatgtccttgtaatttcagattctt 1689  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggaccaaaa 406  Q
    |||||| ||||||||||   |||||| | |||| ||||||||||||||| |||||||||||||||||||||    
T  1688 ccacttttggtccctcacatcaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaa 1618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 1411 - 1553
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||||| ||  |||||||| ||||||| || |||||||||||||         |||||||||| ||||| |||||||||| ||||||    
T  1411 gggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattctt 1509  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
    |||||| ||||||||| || || ||||| |||| ||||| ||||    
T  1510 ccacttttggtccctcctttcatcacgtcagcagaatctacata 1553  T

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Target: scaffold0141 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 236 - 398
Target Start/End: Complemental strand, 8700 - 8538
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||  ||||| || | || ||||||||||||||||||||||||||||| |         |||||||||||||||| |||||||| | ||||||    
T  8700 gggtaaatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattctt 8601  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagg 398  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||    
T  8600 ccacttttggtccctcattccaccacgtcagcagaatctgcatacatgacacgtaaaatgagg 8538  T

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Target: scaffold0141; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 8325 - 8378
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccc 289  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  8325 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 286 - 390
Alignment:
Q  302 gatttagattttgtccttgtaatttcatattcttccacttgtggtccctcattccaccacgtaagcataatctgcatacatggtacgtaaaatgagggac 401  Q
    |||||||||||| |||   |||||||| |||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  286 gatttagattttctccccataatttcagattcttccacttttggtccctcattccaccacataagcagaatttgcatacatggtacgtaaaatgagggac 385  T
Q  402 caaaa 406  Q
    |||||    
T  386 caaaa 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 605 - 539
Alignment:
Q  226 atttgtaaatgggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||| |||||||||||||||||  ||  || ||||||| ||||||||||||||| |||||||    
T  605 atttgtaaaagggtaaatacctctttttatctctggaatattaacgaattccggttttactccctgt 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 241 - 380
Target Start/End: Complemental strand, 12355 - 12216
Alignment:
Q  241 aatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattcttccact 340  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |         |||||||||||||||| |||||||||| |||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  341 tgtggtccctcattccaccacgtaagcataatctgcatac 380  Q
    | |||||| || || || ||||| |||| |||||||||||    
T  12255 tttggtccatcctttcatcacgtcagcagaatctgcatac 12216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 16006 - 15867
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||          |   ||||||||||| |||||||||||||||||    
T  16006 gggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgtaaaaaa----aaaaagattttgtccctgtaatttcatattctt 15911  T
Q  336 ccacttgtggtccctcattccaccacgtaagcataatctgcata 379  Q
     ||||| ||||| ||| || || ||||| |||| ||||||||||    
T  15910 tcacttttggtctctcctttcatcacgtcagcagaatctgcata 15867  T

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Target: scaffold0352 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 6057 - 6001
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 292  Q
    ||||||||||||||||| |||| || ||||||||||||||||| |||||||||||||    
T  6057 gggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgt 6001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 350
Target Start/End: Original strand, 4667 - 4781
Alignment:
Q  236 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttagattttgtccttgtaatttcatattctt 335  Q
    ||||||||||||||||| |||| || |||||||||||||||| |||||||||||| |           |||||||| ||||| |||||||||| |||| |    
T  4667 gggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccctataaaaaaaaaagtttagattctgtccctgtaatttcagattcct 4766  T
Q  336 ccacttgtggtccct 350  Q
    |||||| ||||||||    
T  4767 ccacttttggtccct 4781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 275
Target Start/End: Complemental strand, 5916 - 5873
Alignment:
Q  232 aaatgggtaaatacctcttttcgtccatgtaatattagcgaatt 275  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  5916 aaatgggttaatacctcttttggtccatgtaatattagcgaatt 5873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 274 - 226
Alignment:
Q  242 atacctcttttcgtccatgtaatattagcgaattccggttttagtccct 290  Q
    ||||| ||||| |||| | ||||||||||||||||| ||||||||||||    
T  274 ataccacttttagtccctataatattagcgaattccagttttagtccct 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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