View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11082_high_4 (Length: 246)
Name: NF11082_high_4
Description: NF11082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11082_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 24927379 - 24927146
Alignment:
| Q |
1 |
gagactcgcagttctcgtccaactgctttaaagctaagggtaagaactatttaatacttcctctgtctcatattacatgtctcttaaggttacacacgca |
100 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
24927379 |
gagactcacagttctcgtccaactgctttaaagctaagggtaagaactatttaatacttcctctgtctcatattacatgtcttttaaggttacacacgca |
24927280 |
T |
|
| Q |
101 |
taggaaaattatcgagtttactaatttctatgctaaaatgtgtttgtttcatttactaaagtaccctatcaatagcagttaggtgaattaagattcagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
24927279 |
taggaaaattatcgagtttactaatttctatgctaaaatgtgtttgtttcatttactaaagtaccctatcaatagcagttaggtgaattaagattctgtt |
24927180 |
T |
|
| Q |
201 |
aatgagtttatatgcagcatagcaattttcctct |
234 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
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|
| T |
24927179 |
aatgagtgtatatgcagcatagcaattttcctct |
24927146 |
T |
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