View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11085_high_15 (Length: 273)
Name: NF11085_high_15
Description: NF11085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11085_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 2 - 263
Target Start/End: Original strand, 35638026 - 35638286
Alignment:
| Q |
2 |
catgagtgatatttaaccaagtaccaaccaatttctatatataataacattgacccaaatctatattaatgttgaacttacgagtgtgaatccagttcga |
101 |
Q |
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| T |
35638026 |
catgagtgatattttaccaagtaccaaccaatttctatatataataacattgacccaaatctatattaatgttgaacttacgagtgtgaatccagttcga |
35638125 |
T |
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| Q |
102 |
attttctcctttccctagtatatgtatccattattatctaacctttatcaaattatcaagtcaaatggacaggaattctaatttaatttcccaatataca |
201 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
35638126 |
attttctcctttccctagtatatgtatccgttattatctaacctttatcaaattatcaag-caaatggacaggaattctaatttaatttcccaatataca |
35638224 |
T |
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| Q |
202 |
tttctcaatcgcttccaaaagttgaatatcttggattctgaagaaactatcgctctattcat |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35638225 |
tttctcaatcgcttccaaaagttgaatatcttggattctgaagaaactatcgctctattcat |
35638286 |
T |
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