View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11085_high_25 (Length: 239)
Name: NF11085_high_25
Description: NF11085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11085_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 43462103 - 43462325
Alignment:
| Q |
1 |
aatagaaacccttaattttcaccatcctttaaaaaccctgttctctattcttttttcatgtatactaaacactgaggttgcggcagaatttagaaactcg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43462103 |
aatagaaacccttaattttcaccatcctttaaaaaccctgttctctattcttttttcatgtatactaaacactgaggttgcggcagaatttagaaactcg |
43462202 |
T |
|
| Q |
101 |
atttttgtttctttgattcttagaaaaacaaccaccgagtgaacatgggaaacaactgtgttggactcagaaatacctccgatgaaattttttcaacatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43462203 |
atttttgtttctttgattcttagaaaaacaaccaccgagtgaacatgggaaacaactgtgttggactcagaaatacctccgatgaaattttttcaacatc |
43462302 |
T |
|
| Q |
201 |
gtgttgctgctcatggtcatatc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
43462303 |
gtgttgctgctcatggtcatatc |
43462325 |
T |
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