View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11085_low_6 (Length: 560)

Name: NF11085_low_6
Description: NF11085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11085_low_6
NF11085_low_6
[»] chr7 (8 HSPs)
chr7 (20-167)||(3706006-3706149)
chr7 (66-132)||(3693354-3693420)
chr7 (71-131)||(3685618-3685678)
chr7 (31-130)||(3701070-3701169)
chr7 (481-538)||(6344152-6344209)
chr7 (487-542)||(29937142-29937197)
chr7 (485-538)||(2317478-2317531)
chr7 (186-219)||(3700872-3700905)
[»] chr1 (6 HSPs)
chr1 (483-545)||(25388354-25388416)
chr1 (494-540)||(3873903-3873949)
chr1 (486-538)||(28381534-28381586)
chr1 (482-541)||(27800813-27800872)
chr1 (485-538)||(30713395-30713448)
chr1 (485-545)||(9990619-9990680)
[»] chr2 (5 HSPs)
chr2 (482-539)||(37532790-37532847)
chr2 (482-540)||(1467576-1467634)
chr2 (481-538)||(36930756-36930813)
chr2 (486-538)||(13415254-13415306)
chr2 (486-540)||(27951935-27951989)
[»] chr8 (3 HSPs)
chr8 (486-538)||(39297990-39298042)
chr8 (485-521)||(9445394-9445430)
chr8 (481-525)||(26259754-26259798)
[»] chr6 (4 HSPs)
chr6 (481-537)||(33821005-33821061)
chr6 (486-541)||(11970453-11970508)
chr6 (486-532)||(28633770-28633816)
chr6 (481-538)||(15601895-15601952)
[»] chr5 (4 HSPs)
chr5 (483-538)||(28449274-28449329)
chr5 (481-538)||(33018937-33018994)
chr5 (486-538)||(35836780-35836832)
chr5 (481-526)||(22100362-22100407)
[»] chr4 (3 HSPs)
chr4 (486-538)||(17874467-17874519)
chr4 (485-538)||(50016067-50016120)
chr4 (489-540)||(43128100-43128151)
[»] scaffold0024 (1 HSPs)
scaffold0024 (485-521)||(87717-87753)
[»] chr3 (4 HSPs)
chr3 (501-540)||(6985471-6985510)
chr3 (501-540)||(8129520-8129559)
chr3 (481-532)||(8440927-8440978)
chr3 (481-526)||(25783087-25783132)
[»] scaffold0036 (1 HSPs)
scaffold0036 (486-540)||(45325-45379)


Alignment Details
Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 3706006 - 3706149
Alignment:
Q  20 caaaaagtttaaggtcggaacattgaggtcatttttagaaatatgagtgtgaatgtttataaacctttcttattctcaattaggttgaccggttctggtg 119  Q
    |||||||||||||||||||||||| |||||||||| ||||| |||||| |||||||||||||||   ||||||||||||||||| |||    ||||||||    
T  3706006 caaaaagtttaaggtcggaacattaaggtcattttcagaaacatgagtctgaatgtttataaactagtcttattctcaattagggtga-tttttctggtg 3706104  T
Q  120 taattcggtatggaaattcatgttatttcgagcaggagctgatgtaca 167  Q
    ||||||||  ||||||  ||||||||||||||||| ||||| ||||||    
T  3706105 taattcgg--tggaaa-ccatgttatttcgagcagaagctgttgtaca 3706149  T

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Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 3693354 - 3693420
Alignment:
Q  66 gtgtgaatgtttataaacctttcttattctcaattaggttgaccggttctggtgtaattcggtatgg 132  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  3693354 gtgtgaatgtttataaaccattcttattctcaattagggtgatcggttctggtgtaattcggtatgg 3693420  T

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Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 3685618 - 3685678
Alignment:
Q  71 aatgtttataaacctttcttattctcaattaggttgaccggttctggtgtaattcggtatg 131  Q
    |||||||||||||  ||| |||||||||||||| ||| |||||||||||||||||||||||    
T  3685618 aatgtttataaactgttcctattctcaattagggtgatcggttctggtgtaattcggtatg 3685678  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 3701070 - 3701169
Alignment:
Q  31 aggtcggaacattgaggtcatttttagaaatatgagtgtgaatgtttataaacctttcttattctcaattaggttgaccggttctggtgtaattcggtat 130  Q
    |||||| | |||||| || | ||||||||||||||||| |||||| | |||||  |||||||||||||||||| | | |||| ||||| |||| ||||||    
T  3701070 aggtcgaagcattgatgttacttttagaaatatgagtgagaatgtgtgtaaactattcttattctcaattagggtaatcggtactggtctaatccggtat 3701169  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 538
Target Start/End: Original strand, 6344152 - 6344209
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    ||||||||||||||||||  |  ||||||||||||||||||| ||||||||| |||||    
T  6344152 tcatttgtggtggtcgagccctatgtcgtgtttaggcattgggtaaccacttcttgta 6344209  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 29937142 - 29937197
Alignment:
Q  487 gtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtattct 542  Q
    |||||||||||||   |||| ||||||||| ||||||||| |||||||||||||||    
T  29937142 gtggtggtcgagtcatttgttgtgtttaggtattggctaatcacttgttgtattct 29937197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 538
Target Start/End: Complemental strand, 2317531 - 2317478
Alignment:
Q  485 ttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    |||||||||||||||   |||||||||||||||||||| || |||||| |||||    
T  2317531 ttgtggtggtcgagtctcttgtcgtgtttaggcattggttagccacttcttgta 2317478  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 3700872 - 3700905
Alignment:
Q  186 taatcactgagaaaaagaatcactcaacctatat 219  Q
    |||||||||||||||| |||||||||||||||||    
T  3700872 taatcactgagaaaaataatcactcaacctatat 3700905  T

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Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 25388416 - 25388354
Alignment:
Q  483 atttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtattctgtg 545  Q
    ||||||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||||    
T  25388416 atttgtggtggtcgagtcctttgtcgtgtttagacattggctagccacttgttgtattctgtg 25388354  T

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Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 494 - 540
Target Start/End: Complemental strand, 3873949 - 3873903
Alignment:
Q  494 tcgagttcattgtcgtgtttaggcattggctaaccacttgttgtatt 540  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  3873949 tcgagtccattgtcgtgtttaggcattgactaaccacttgttgtatt 3873903  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 538
Target Start/End: Complemental strand, 28381586 - 28381534
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    |||||| ||||| | |||||||||||||||||||||| |||||||||||||||    
T  28381586 tgtggttgtcgaatccattgtcgtgtttaggcattggttaaccacttgttgta 28381534  T

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Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 482 - 541
Target Start/End: Complemental strand, 27800872 - 27800813
Alignment:
Q  482 catttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtattc 541  Q
    |||||||||||||||||| | ||||| | ||||||||||| ||| |||||||||||||||    
T  27800872 catttgtggtggtcgagtcctttgtcctatttaggcattgactagccacttgttgtattc 27800813  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 538
Target Start/End: Original strand, 30713395 - 30713448
Alignment:
Q  485 ttgtggtggtcgagt-tcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    ||||||||||||||| |||| |||||||||||||||||| ||||||||| |||||    
T  30713395 ttgtggtggtcgagtctcat-gtcgtgtttaggcattggataaccacttcttgta 30713448  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 545
Target Start/End: Complemental strand, 9990680 - 9990619
Alignment:
Q  485 ttgtggtggtcgagttcattgtcgtgtttaggcattggcta-accacttgttgtattctgtg 545  Q
    |||||||| |||||| |||||||||||||||||||||  || || | |||||||||||||||    
T  9990680 ttgtggtgatcgagtccattgtcgtgtttaggcattgtgtagactatttgttgtattctgtg 9990619  T

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Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 482 - 539
Target Start/End: Original strand, 37532790 - 37532847
Alignment:
Q  482 catttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtat 539  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| | ||||||    
T  37532790 catttgtggtggtcgagttcattgtcgtgtctaggcattgactaaccacattttgtat 37532847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 482 - 540
Target Start/End: Complemental strand, 1467634 - 1467576
Alignment:
Q  482 catttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtatt 540  Q
    ||||||||||||||||| || |||||||||||| ||||||||| ||| |||||||||||    
T  1467634 catttgtggtggtcgagctctttgtcgtgtttatgcattggctgacctcttgttgtatt 1467576  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 538
Target Start/End: Complemental strand, 36930813 - 36930756
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    ||||||||||||||||||  |  ||||||||||||||||||| ||||||||| |||||    
T  36930813 tcatttgtggtggtcgagccctatgtcgtgtttaggcattggttaaccacttcttgta 36930756  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 538
Target Start/End: Complemental strand, 13415306 - 13415254
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    |||||| ||||| | |||||||||||||||||||||| |||| ||||||||||    
T  13415306 tgtggttgtcgaatccattgtcgtgtttaggcattggttaacaacttgttgta 13415254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 540
Target Start/End: Original strand, 27951935 - 27951989
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtatt 540  Q
    |||||| ||||| | |||||||||||||||||||||| | || ||||||||||||    
T  27951935 tgtggttgtcgaatccattgtcgtgtttaggcattggttgacaacttgttgtatt 27951989  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 486 - 538
Target Start/End: Original strand, 39297990 - 39298042
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||||    
T  39297990 tgtggttgtcgaattcattgtcgtgtttaggcattggttaaccacttgttgta 39298042  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 521
Target Start/End: Original strand, 9445394 - 9445430
Alignment:
Q  485 ttgtggtggtcgagttcattgtcgtgtttaggcattg 521  Q
    ||||||||||||||| |||||||||||||||||||||    
T  9445394 ttgtggtggtcgagtccattgtcgtgtttaggcattg 9445430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 525
Target Start/End: Complemental strand, 26259798 - 26259754
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggcta 525  Q
    |||||||||||||  ||| || |||||||||||||||||||||||    
T  26259798 tcatttgtggtggatgagctctttgtcgtgtttaggcattggcta 26259754  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 481 - 537
Target Start/End: Complemental strand, 33821061 - 33821005
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgt 537  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||    
T  33821061 tcatttgtggtggttgagttcattgtcgtgtttaggcattggttaactacttcttgt 33821005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 541
Target Start/End: Original strand, 11970453 - 11970508
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtattc 541  Q
    |||||||||||||| ||||||||| ||||| ||| ||||| |||||||||||||||    
T  11970453 tgtggtggtcgagtccattgtcgtatttagacataggctagccacttgttgtattc 11970508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 532
Target Start/End: Original strand, 28633770 - 28633816
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccactt 532  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||    
T  28633770 tgtggtggttgagtccattgtcgtgtttaggcattggttaaccactt 28633816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 538
Target Start/End: Complemental strand, 15601952 - 15601895
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    ||||||||||||||||||  |  ||||||||||||||||||| ||||||||| |||||    
T  15601952 tcatttgtggtggtcgagccccatgtcgtgtttaggcattggttaaccacttcttgta 15601895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 483 - 538
Target Start/End: Original strand, 28449274 - 28449329
Alignment:
Q  483 atttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||    
T  28449274 atttgtggtggtcgagcccattgtcgtgtttaggcattgactaaccactttttgta 28449329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 481 - 538
Target Start/End: Original strand, 33018937 - 33018994
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    |||||||||||||||||| ||  ||||||||||||||||||| ||||||||| |||||    
T  33018937 tcatttgtggtggtcgagctccatgtcgtgtttaggcattggttaaccacttcttgta 33018994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 538
Target Start/End: Complemental strand, 35836832 - 35836780
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    |||||| ||||| | |||||||||| ||||||||||| |||||||||||||||    
T  35836832 tgtggttgtcgaatccattgtcgtgcttaggcattggttaaccacttgttgta 35836780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 526
Target Start/End: Original strand, 22100362 - 22100407
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggctaa 526  Q
    |||||||||||||  |||| | ||||||||||||||||||||||||    
T  22100362 tcatttgtggtggatgagtcctttgtcgtgtttaggcattggctaa 22100407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 538
Target Start/End: Complemental strand, 17874519 - 17874467
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    |||||| ||||| | |||||||||||||||||||||| |||||||||||||||    
T  17874519 tgtggttgtcgaatccattgtcgtgtttaggcattggttaaccacttgttgta 17874467  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 485 - 538
Target Start/End: Original strand, 50016067 - 50016120
Alignment:
Q  485 ttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgta 538  Q
    ||||||||||||||| |  ||||||||||||||||||| ||||||||| |||||    
T  50016067 ttgtggtggtcgagtcccatgtcgtgtttaggcattggttaaccacttcttgta 50016120  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 540
Target Start/End: Original strand, 43128100 - 43128151
Alignment:
Q  489 ggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtatt 540  Q
    |||||||||||  |||||||| ||||||||||||||| |||||| |||||||    
T  43128100 ggtggtcgagtctattgtcgtatttaggcattggctagccacttattgtatt 43128151  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 521
Target Start/End: Original strand, 87717 - 87753
Alignment:
Q  485 ttgtggtggtcgagttcattgtcgtgtttaggcattg 521  Q
    ||||||||||||||| |||||||||||||||||||||    
T  87717 ttgtggtggtcgagtccattgtcgtgtttaggcattg 87753  T

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Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 6985510 - 6985471
Alignment:
Q  501 cattgtcgtgtttaggcattggctaaccacttgttgtatt 540  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  6985510 cattgtcgtgtttaggcattggataacaacttgttgtatt 6985471  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 8129559 - 8129520
Alignment:
Q  501 cattgtcgtgtttaggcattggctaaccacttgttgtatt 540  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  8129559 cattgtcgtgtttaggcattggttaacaacttgttgtatt 8129520  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 532
Target Start/End: Original strand, 8440927 - 8440978
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggctaaccactt 532  Q
    ||||||||||||||||||  |  ||||||||||||||||||| |||||||||    
T  8440927 tcatttgtggtggtcgagccctatgtcgtgtttaggcattggttaaccactt 8440978  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 526
Target Start/End: Complemental strand, 25783132 - 25783087
Alignment:
Q  481 tcatttgtggtggtcgagttcattgtcgtgtttaggcattggctaa 526  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| ||||    
T  25783132 tcatttgtggtggacgagtccattgtcatgtttaggcattgtctaa 25783087  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 540
Target Start/End: Original strand, 45325 - 45379
Alignment:
Q  486 tgtggtggtcgagttcattgtcgtgtttaggcattggctaaccacttgttgtatt 540  Q
    |||||| ||||| | |||||||||||||||||||||| | || ||||||||||||    
T  45325 tgtggttgtcgaatccattgtcgtgtttaggcattggttgacaacttgttgtatt 45379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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