View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11086_high_4 (Length: 432)
Name: NF11086_high_4
Description: NF11086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11086_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 8 - 415
Target Start/End: Complemental strand, 19119063 - 19118656
Alignment:
| Q |
8 |
gagcacagacttcatttatttttatttacttaaacatatatgttttaataataaacaaaagcatcttagnnnnnnnagttgttttgaaattcagtattca |
107 |
Q |
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| T |
19119063 |
gagcacagacttcatttatttttatttacttaaacatatatgttttaataataaacaaaagcatcttagtttttttagttgttttgaaattcagtattca |
19118964 |
T |
|
| Q |
108 |
aacactgaaagtgtatcgcgtggtctgacgaaacttgatctcagataagctgagaaaccacaatttgatcaaatgtgcacatttgtttgtgctatcaagg |
207 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
19118963 |
aacactgaaagtgtattgcgtggtctgacgaaacttgatctcagataagctgagaaaccacaatttcatcaaatgtgcacatttgtttgtgctatcaaac |
19118864 |
T |
|
| Q |
208 |
cggtgaattggttctacattatttccatgaaaaaagtattacaggggaaaagaaagttgaggtttttcatgaggttcagttttctttttcagaggaaaaa |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |
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| T |
19118863 |
cggtgaattggttctacattatttccatgaaaaaagtattacaggggaaaagaaagttgaggtttttcatgacgttcagttttctttttcataggaaaaa |
19118764 |
T |
|
| Q |
308 |
tttgagaacagaataacaaagaacagaccctagatagtgttattttttatgcctcatattttttaaagcttctgccacattcttcattcttacccttaca |
407 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
19118763 |
tttgagaacagaataacaaagaacagaccctagatagtgttattttttatgcctcatattttttaaagcttctgccacattcttctttcttacccttaca |
19118664 |
T |
|
| Q |
408 |
tgcttcat |
415 |
Q |
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|||||||| |
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| T |
19118663 |
tgcttcat |
19118656 |
T |
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