View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11086_low_12 (Length: 212)
Name: NF11086_low_12
Description: NF11086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11086_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 29586304 - 29586128
Alignment:
| Q |
18 |
agatgtccgctttcaggatctcatgacattgaattggttcagatgctagattgcatatatgccttattcgtcaatcaaataaggccttttgtattcaagg |
117 |
Q |
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| T |
29586304 |
agatgtcctctttcaggatctcatgacattgaattggttcagatgctagattgcataaatgccttattcgtcaatcaaataaggccttttgtattcaagg |
29586205 |
T |
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| Q |
118 |
tcattttctgaggatggcctgcattagattggcaagccgtgctaatctcacattattgtatcttgtattgtccataa |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29586204 |
tcattttctgaggatggcctgcattagattggcaagccgtgctaatctcacattattgtatcttgtattgtccataa |
29586128 |
T |
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