View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11087_low_7 (Length: 262)

Name: NF11087_low_7
Description: NF11087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11087_low_7
NF11087_low_7
[»] chr8 (49 HSPs)
chr8 (18-249)||(126253-126479)
chr8 (60-132)||(3025590-3025662)
chr8 (60-123)||(22652035-22652098)
chr8 (60-141)||(33405332-33405413)
chr8 (60-123)||(5813640-5813703)
chr8 (60-123)||(29510241-29510304)
chr8 (159-227)||(25192387-25192456)
chr8 (68-141)||(44462151-44462224)
chr8 (68-141)||(44469684-44469757)
chr8 (60-132)||(926736-926808)
chr8 (64-112)||(22943301-22943349)
chr8 (60-132)||(24413507-24413579)
chr8 (60-132)||(40332230-40332302)
chr8 (64-117)||(8343381-8343434)
chr8 (60-117)||(15816066-15816123)
chr8 (64-117)||(36450706-36450759)
chr8 (83-123)||(2572016-2572056)
chr8 (60-132)||(14134738-14134810)
chr8 (60-126)||(37283763-37283826)
chr8 (60-132)||(43737759-43737831)
chr8 (60-123)||(21465471-21465534)
chr8 (160-227)||(24669384-24669451)
chr8 (60-123)||(29447503-29447566)
chr8 (60-123)||(34450969-34451032)
chr8 (60-122)||(29447047-29447109)
chr8 (60-129)||(3951484-3951553)
chr8 (63-116)||(15023208-15023261)
chr8 (63-132)||(20679346-20679415)
chr8 (160-228)||(20785506-20785575)
chr8 (60-117)||(22197679-22197736)
chr8 (159-227)||(4298926-4298994)
chr8 (60-128)||(31109466-31109534)
chr8 (60-123)||(6065594-6065657)
chr8 (83-141)||(20873099-20873157)
chr8 (159-205)||(22197782-22197828)
chr8 (159-205)||(22651949-22651995)
chr8 (60-118)||(26902112-26902170)
chr8 (159-205)||(29510344-29510390)
chr8 (160-205)||(926829-926874)
chr8 (60-117)||(11803324-11803381)
chr8 (64-117)||(16641921-16641974)
chr8 (62-126)||(17751700-17751765)
chr8 (62-126)||(17760687-17760752)
chr8 (60-101)||(27213595-27213636)
chr8 (60-101)||(40064032-40064073)
chr8 (159-218)||(4673465-4673525)
chr8 (60-132)||(4786286-4786358)
chr8 (60-124)||(24205756-24205820)
chr8 (65-117)||(24858070-24858122)
[»] chr3 (39 HSPs)
chr3 (63-132)||(40993286-40993355)
chr3 (60-141)||(55401105-55401186)
chr3 (60-132)||(3631723-3631795)
chr3 (61-123)||(4987229-4987291)
chr3 (60-117)||(27505305-27505362)
chr3 (60-141)||(35222968-35223049)
chr3 (67-123)||(10955000-10955056)
chr3 (60-132)||(18426988-18427060)
chr3 (60-132)||(20503504-20503576)
chr3 (60-116)||(34185060-34185116)
chr3 (60-132)||(8789496-8789570)
chr3 (60-123)||(41961587-41961650)
chr3 (60-110)||(15999958-16000008)
chr3 (60-117)||(25064972-25065029)
chr3 (65-117)||(7171555-7171607)
chr3 (60-132)||(13845473-13845545)
chr3 (60-123)||(14216951-14217014)
chr3 (60-123)||(14223080-14223143)
chr3 (60-132)||(24204989-24205061)
chr3 (63-112)||(28918062-28918111)
chr3 (60-117)||(29508504-29508561)
chr3 (160-227)||(8383207-8383275)
chr3 (60-132)||(8842368-8842440)
chr3 (97-132)||(2941597-2941632)
chr3 (62-117)||(6525633-6525688)
chr3 (159-227)||(14747511-14747580)
chr3 (76-123)||(14832158-14832205)
chr3 (159-227)||(21479068-21479137)
chr3 (60-103)||(40052380-40052423)
chr3 (64-126)||(11252021-11252083)
chr3 (162-227)||(14216843-14216908)
chr3 (162-227)||(14222972-14223037)
chr3 (60-132)||(25775548-25775618)
chr3 (83-132)||(45451592-45451641)
chr3 (60-113)||(49651724-49651777)
chr3 (60-128)||(4466548-4466616)
chr3 (160-208)||(11658785-11658833)
chr3 (61-117)||(23657793-23657849)
chr3 (60-92)||(34910396-34910428)
[»] chr4 (47 HSPs)
chr4 (60-132)||(23292934-23293006)
chr4 (60-117)||(3947709-3947766)
chr4 (63-132)||(49431065-49431134)
chr4 (60-132)||(12895222-12895294)
chr4 (60-123)||(30838269-30838332)
chr4 (60-123)||(30982815-30982878)
chr4 (63-132)||(28964199-28964268)
chr4 (60-132)||(8423666-8423738)
chr4 (159-227)||(12628625-12628693)
chr4 (60-116)||(27706114-27706170)
chr4 (60-132)||(34306752-34306824)
chr4 (60-132)||(35161075-35161147)
chr4 (60-103)||(3712461-3712504)
chr4 (60-123)||(5414109-5414172)
chr4 (60-123)||(22234827-22234890)
chr4 (60-123)||(36635378-36635441)
chr4 (60-110)||(715553-715603)
chr4 (60-110)||(752879-752929)
chr4 (159-228)||(20633428-20633504)
chr4 (60-122)||(24613638-24613700)
chr4 (60-106)||(28084589-28084635)
chr4 (60-117)||(14465013-14465070)
chr4 (71-132)||(36509051-36509112)
chr4 (60-116)||(19312401-19312457)
chr4 (60-112)||(19482738-19482790)
chr4 (64-132)||(21945542-21945610)
chr4 (159-227)||(28720827-28720895)
chr4 (60-112)||(29205527-29205579)
chr4 (159-227)||(40481588-40481656)
chr4 (60-123)||(53381538-53381602)
chr4 (64-123)||(4157484-4157543)
chr4 (64-115)||(32273473-32273524)
chr4 (160-206)||(35723426-35723471)
chr4 (60-117)||(848016-848073)
chr4 (60-141)||(2361923-2362004)
chr4 (63-132)||(16073433-16073502)
chr4 (65-106)||(21873315-21873356)
chr4 (65-106)||(21929176-21929217)
chr4 (160-205)||(36635297-36635342)
chr4 (71-132)||(40179595-40179656)
chr4 (95-132)||(54580006-54580043)
chr4 (159-227)||(3947806-3947874)
chr4 (60-132)||(12797286-12797358)
chr4 (160-192)||(17345456-17345488)
chr4 (60-123)||(24343560-24343624)
chr4 (67-123)||(34589658-34589714)
chr4 (73-141)||(40006033-40006101)
[»] chr7 (38 HSPs)
chr7 (60-117)||(5409779-5409836)
chr7 (60-141)||(15680839-15680920)
chr7 (60-141)||(598238-598319)
chr7 (159-227)||(24105629-24105697)
chr7 (60-128)||(32287411-32287479)
chr7 (60-123)||(24339701-24339764)
chr7 (60-117)||(9778559-9778616)
chr7 (64-141)||(21864838-21864915)
chr7 (60-117)||(43027412-43027469)
chr7 (60-132)||(21880191-21880263)
chr7 (160-227)||(27944991-27945059)
chr7 (60-123)||(26033398-26033461)
chr7 (60-117)||(32093962-32094020)
chr7 (60-117)||(1433513-1433570)
chr7 (60-117)||(13770750-13770807)
chr7 (60-132)||(20549830-20549902)
chr7 (64-132)||(26733343-26733411)
chr7 (65-132)||(5835286-5835353)
chr7 (60-110)||(29763137-29763187)
chr7 (65-123)||(32308179-32308237)
chr7 (160-226)||(49107773-49107839)
chr7 (60-117)||(2334314-2334371)
chr7 (64-141)||(18212985-18213062)
chr7 (61-104)||(14729770-14729813)
chr7 (60-115)||(17852056-17852111)
chr7 (60-102)||(18215145-18215187)
chr7 (159-228)||(21864755-21864825)
chr7 (60-106)||(40287310-40287356)
chr7 (60-101)||(6490786-6490827)
chr7 (160-205)||(11722139-11722184)
chr7 (159-227)||(43027509-43027578)
chr7 (160-228)||(2034391-2034459)
chr7 (159-203)||(13585282-13585326)
chr7 (61-141)||(14077383-14077463)
chr7 (61-141)||(14387411-14387491)
chr7 (60-132)||(22484064-22484136)
chr7 (160-192)||(32308106-32308138)
chr7 (60-115)||(43250059-43250115)
[»] chr1 (50 HSPs)
chr1 (60-141)||(29163329-29163410)
chr1 (60-132)||(5898214-5898286)
chr1 (60-132)||(37598870-37598942)
chr1 (60-123)||(9828103-9828166)
chr1 (64-117)||(1486656-1486709)
chr1 (60-123)||(40917808-40917871)
chr1 (66-132)||(40181910-40181976)
chr1 (60-141)||(22515835-22515916)
chr1 (60-141)||(26830618-26830698)
chr1 (60-141)||(46348331-46348412)
chr1 (60-132)||(42359397-42359469)
chr1 (60-115)||(6427531-6427586)
chr1 (60-123)||(47989556-47989619)
chr1 (159-228)||(5927380-5927450)
chr1 (59-132)||(1815296-1815369)
chr1 (60-117)||(16297229-16297286)
chr1 (63-132)||(40258884-40258953)
chr1 (72-112)||(6427594-6427634)
chr1 (60-132)||(18337368-18337440)
chr1 (60-124)||(32461401-32461465)
chr1 (160-207)||(6427321-6427368)
chr1 (64-123)||(19562567-19562626)
chr1 (160-228)||(36878416-36878479)
chr1 (159-206)||(48450627-48450674)
chr1 (159-205)||(398805-398851)
chr1 (60-130)||(12918986-12919056)
chr1 (160-227)||(17831572-17831640)
chr1 (60-132)||(52903288-52903357)
chr1 (63-123)||(17831473-17831534)
chr1 (67-132)||(51410064-51410129)
chr1 (60-132)||(10577683-10577755)
chr1 (159-228)||(38078701-38078772)
chr1 (65-116)||(18190061-18190112)
chr1 (60-123)||(25934675-25934738)
chr1 (160-206)||(2896162-2896208)
chr1 (68-118)||(31015090-31015140)
chr1 (67-141)||(38078616-38078690)
chr1 (60-141)||(5927288-5927369)
chr1 (60-113)||(5944352-5944405)
chr1 (160-226)||(6415042-6415110)
chr1 (76-141)||(8842678-8842743)
chr1 (67-132)||(19637807-19637872)
chr1 (60-141)||(34712331-34712412)
chr1 (60-116)||(6414939-6414995)
chr1 (64-116)||(6612112-6612164)
chr1 (60-116)||(9629837-9629893)
chr1 (73-132)||(9690234-9690294)
chr1 (80-132)||(21530728-21530780)
chr1 (60-92)||(22881575-22881607)
chr1 (160-192)||(40285695-40285727)
[»] chr2 (43 HSPs)
chr2 (60-132)||(2438667-2438739)
chr2 (60-120)||(42511330-42511390)
chr2 (60-132)||(28596508-28596580)
chr2 (60-123)||(37419802-37419865)
chr2 (60-114)||(26769579-26769633)
chr2 (60-141)||(34993930-34994011)
chr2 (60-117)||(38117107-38117164)
chr2 (60-132)||(18840961-18841033)
chr2 (160-227)||(23717977-23718044)
chr2 (160-227)||(24105649-24105716)
chr2 (60-126)||(24009340-24009406)
chr2 (60-141)||(5040764-5040845)
chr2 (159-227)||(20539714-20539783)
chr2 (162-227)||(21091674-21091739)
chr2 (60-141)||(37559007-37559088)
chr2 (60-132)||(15972912-15972984)
chr2 (65-132)||(12224262-12224329)
chr2 (63-122)||(19942314-19942373)
chr2 (159-227)||(21374739-21374809)
chr2 (60-123)||(35056927-35056990)
chr2 (74-132)||(5367231-5367289)
chr2 (64-122)||(27084318-27084376)
chr2 (60-117)||(11223801-11223857)
chr2 (63-116)||(15657930-15657983)
chr2 (159-227)||(14996264-14996332)
chr2 (64-132)||(20242679-20242747)
chr2 (60-116)||(30717467-30717523)
chr2 (66-130)||(37411198-37411262)
chr2 (162-192)||(31018576-31018606)
chr2 (160-205)||(18276494-18276539)
chr2 (159-227)||(19536438-19536507)
chr2 (162-226)||(21624217-21624282)
chr2 (60-109)||(21782752-21782801)
chr2 (167-224)||(28596426-28596483)
chr2 (159-192)||(34994016-34994049)
chr2 (64-117)||(41843500-41843553)
chr2 (60-117)||(44860385-44860442)
chr2 (64-116)||(14996171-14996222)
chr2 (160-227)||(21782859-21782927)
chr2 (64-123)||(22084768-22084830)
chr2 (60-100)||(23058392-23058432)
chr2 (160-208)||(27286333-27286381)
chr2 (164-227)||(33519736-33519800)
[»] chr6 (49 HSPs)
chr6 (159-225)||(12696277-12696343)
chr6 (60-141)||(7378009-7378090)
chr6 (60-132)||(28152137-28152209)
chr6 (60-132)||(32978847-32978919)
chr6 (60-132)||(34595173-34595245)
chr6 (60-117)||(17327598-17327655)
chr6 (60-123)||(8365456-8365519)
chr6 (162-225)||(9658832-9658895)
chr6 (60-123)||(10339062-10339125)
chr6 (60-123)||(16766756-16766819)
chr6 (65-123)||(3209447-3209505)
chr6 (82-132)||(7740680-7740730)
chr6 (60-118)||(31384983-31385041)
chr6 (60-117)||(17841537-17841594)
chr6 (60-132)||(4877982-4878053)
chr6 (60-132)||(28715334-28715406)
chr6 (60-123)||(7248417-7248480)
chr6 (60-111)||(8776916-8776967)
chr6 (159-226)||(31959111-31959178)
chr6 (159-228)||(3398568-3398638)
chr6 (159-227)||(8365559-8365628)
chr6 (160-205)||(9027151-9027196)
chr6 (60-132)||(7265541-7265613)
chr6 (160-192)||(7265634-7265666)
chr6 (97-141)||(30851630-30851674)
chr6 (160-227)||(30866185-30866253)
chr6 (97-141)||(33001274-33001318)
chr6 (64-123)||(8714039-8714098)
chr6 (60-123)||(9107307-9107370)
chr6 (64-123)||(24645529-24645588)
chr6 (60-107)||(31959214-31959261)
chr6 (60-102)||(9025453-9025495)
chr6 (63-117)||(9629448-9629502)
chr6 (159-189)||(21424842-21424872)
chr6 (66-123)||(5970051-5970108)
chr6 (60-101)||(8389416-8389457)
chr6 (65-102)||(9027236-9027273)
chr6 (60-132)||(9658918-9658991)
chr6 (64-117)||(10294172-10294225)
chr6 (60-105)||(10770615-10770660)
chr6 (60-93)||(10842611-10842644)
chr6 (64-117)||(12696383-12696436)
chr6 (160-226)||(20371151-20371219)
chr6 (65-117)||(3398677-3398729)
chr6 (159-207)||(21068194-21068242)
chr6 (160-192)||(21395348-21395380)
chr6 (65-117)||(23130414-23130466)
chr6 (72-132)||(29020951-29021011)
chr6 (160-204)||(34073388-34073432)
[»] scaffold0003 (2 HSPs)
scaffold0003 (60-117)||(241659-241716)
scaffold0003 (161-205)||(241567-241611)
[»] chr5 (52 HSPs)
chr5 (60-141)||(43564911-43564992)
chr5 (60-132)||(21191004-21191076)
chr5 (60-127)||(39268546-39268613)
chr5 (160-228)||(19820435-19820504)
chr5 (60-117)||(31084382-31084439)
chr5 (60-124)||(16304374-16304438)
chr5 (60-116)||(21576693-21576749)
chr5 (64-123)||(15382533-15382592)
chr5 (60-123)||(21522809-21522872)
chr5 (60-123)||(21533375-21533438)
chr5 (60-123)||(21542089-21542152)
chr5 (161-227)||(22013364-22013431)
chr5 (60-123)||(39698600-39698663)
chr5 (60-121)||(30098387-30098448)
chr5 (64-141)||(32630687-32630764)
chr5 (60-117)||(43001859-43001916)
chr5 (60-116)||(14873577-14873633)
chr5 (60-104)||(17088358-17088402)
chr5 (60-132)||(30098986-30099058)
chr5 (60-132)||(30502336-30502408)
chr5 (60-132)||(30542679-30542751)
chr5 (60-123)||(3966562-3966625)
chr5 (60-123)||(6401557-6401620)
chr5 (60-131)||(17123088-17123158)
chr5 (60-123)||(18592132-18592195)
chr5 (60-123)||(19579760-19579823)
chr5 (65-132)||(26312808-26312875)
chr5 (60-117)||(11686003-11686060)
chr5 (60-117)||(21194071-21194128)
chr5 (84-141)||(23012380-23012437)
chr5 (160-192)||(17123034-17123066)
chr5 (62-114)||(23015934-23015986)
chr5 (65-117)||(27932289-27932341)
chr5 (68-123)||(7677764-7677819)
chr5 (64-132)||(18421789-18421861)
chr5 (60-123)||(32766880-32766943)
chr5 (159-228)||(6247571-6247641)
chr5 (160-225)||(11685898-11685957)
chr5 (60-116)||(19820336-19820389)
chr5 (60-101)||(4105329-4105370)
chr5 (162-203)||(15410491-15410532)
chr5 (160-225)||(26716097-26716162)
chr5 (160-225)||(26985837-26985902)
chr5 (63-132)||(28588625-28588694)
chr5 (64-117)||(36642704-36642756)
chr5 (60-141)||(42029782-42029863)
chr5 (63-132)||(42893399-42893468)
chr5 (160-192)||(6035469-6035501)
chr5 (160-192)||(27144449-27144481)
chr5 (159-227)||(30135264-30135332)
chr5 (60-104)||(35017110-35017154)
chr5 (60-123)||(37328783-37328844)
[»] scaffold0652 (1 HSPs)
scaffold0652 (60-132)||(410-482)
[»] scaffold0019 (1 HSPs)
scaffold0019 (64-123)||(71784-71843)
[»] scaffold0053 (2 HSPs)
scaffold0053 (60-132)||(8837-8909)
scaffold0053 (159-205)||(8771-8817)
[»] scaffold0050 (1 HSPs)
scaffold0050 (60-132)||(70317-70389)
[»] scaffold0008 (1 HSPs)
scaffold0008 (60-123)||(263309-263372)
[»] scaffold0171 (1 HSPs)
scaffold0171 (165-227)||(23371-23433)
[»] scaffold0018 (1 HSPs)
scaffold0018 (160-226)||(192290-192356)
[»] scaffold0004 (2 HSPs)
scaffold0004 (60-117)||(92876-92933)
scaffold0004 (160-198)||(92787-92825)
[»] scaffold0475 (1 HSPs)
scaffold0475 (60-132)||(3347-3419)
[»] scaffold0279 (1 HSPs)
scaffold0279 (160-227)||(17911-17979)
[»] scaffold0086 (1 HSPs)
scaffold0086 (60-111)||(2999-3050)
[»] scaffold0044 (1 HSPs)
scaffold0044 (60-123)||(53239-53302)
[»] scaffold0793 (1 HSPs)
scaffold0793 (60-110)||(4829-4879)
[»] scaffold0136 (1 HSPs)
scaffold0136 (63-117)||(3789-3843)
[»] scaffold0361 (1 HSPs)
scaffold0361 (60-117)||(14581-14638)
[»] scaffold0223 (1 HSPs)
scaffold0223 (159-227)||(20122-20191)
[»] scaffold0512 (1 HSPs)
scaffold0512 (64-132)||(4988-5056)
[»] scaffold0246 (1 HSPs)
scaffold0246 (159-227)||(19527-19595)
[»] scaffold0450 (1 HSPs)
scaffold0450 (60-123)||(8572-8635)
[»] scaffold0380 (1 HSPs)
scaffold0380 (60-123)||(8649-8712)
[»] scaffold0154 (1 HSPs)
scaffold0154 (61-123)||(13472-13534)
[»] scaffold0036 (1 HSPs)
scaffold0036 (60-117)||(9684-9741)
[»] scaffold0697 (1 HSPs)
scaffold0697 (80-132)||(1683-1735)
[»] scaffold0306 (1 HSPs)
scaffold0306 (160-227)||(13350-13418)
[»] scaffold0152 (1 HSPs)
scaffold0152 (160-227)||(21909-21977)


Alignment Details
Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 126253 - 126479
Alignment:
Q  18 tcatcacctagattgtattgtactgcttcgtgggattacattcacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  126253 tcatcacctagattgtattgtattgcttcgtgggattacattcacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacac 126352  T
Q  118 tgacacatataattaaattaaatttaattgtgnnnnnnnncttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccg 217  Q
    ||||||||||     ||||| |||||||||||        |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  126353 tgacacatat-----aattacatttaattgtgttttttttcttcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtccgtgtgcgtatccg 126447  T
Q  218 tgcttcatagccggtgaggtattttttgttct 249  Q
    |||||||||||||||| |||||||||||||||    
T  126448 tgcttcatagccggtgcggtattttttgttct 126479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 3025662 - 3025590
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||||||||||||| | || || ||||||||||||||||||||||||||| ||||||||    
T  3025662 cacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataatta 3025590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 22652098 - 22652035
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||    
T  22652098 cacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacac 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 33405332 - 33405413
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||| | ||||||||||||||| ||| || |||| |||||||||||||||| |||||||||||||| | ||||||    
T  33405332 cacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaatt 33405413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 5813703 - 5813640
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  5813703 cacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 5813640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 29510241 - 29510304
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||| |||||    
T  29510241 cacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 29510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 25192387 - 25192456
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg-tgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| |||||||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  25192387 ttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 44462151 - 44462224
Alignment:
Q  68 ctcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||| ||||||||||| ||||||| || ||||||| ||||| ||||||||| |||||||| ||||    
T  44462151 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacatatgattaaattgaatt 44462224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 44469684 - 44469757
Alignment:
Q  68 ctcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||| ||||||||||| ||||||| || ||||||| ||||| ||||||||| |||||||| ||||    
T  44469684 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacatatgattaaattgaatt 44469757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 926736 - 926808
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||| |  | ||||||||| |||||||||||||| ||||||||| ||||| ||||||||    
T  926736 cacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataatta 926808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 22943301 - 22943349
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtcc 112  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 24413507 - 24413579
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||| |||||||||| ||||||||| | | |||||||  ||||||||||||||||||| ||||||||    
T  24413507 cacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataatta 24413579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 40332302 - 40332230
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| || |||||||| | ||||||||||||||||| |||| ||||| | ||||||    
T  40332302 cacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaatta 40332230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 8343434 - 8343381
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||| |||||    
T  8343434 gacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 15816066 - 15816123
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||| |||||||||| ||||||||||| |||||  |||||||||||||||||    
T  15816066 cacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacac 15816123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 36450706 - 36450759
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  36450706 gacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacac 36450759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 2572016 - 2572056
Alignment:
Q  83 gtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  2572016 gtgtcccggtatcggacacgtgtcgtgtccgacacagacac 2572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 14134810 - 14134738
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||| ||||| ||||||| |||  ||||||||||||||||  ||||| |||| |||||||||    
T  14134810 cacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataatta 14134738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 37283763 - 37283826
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacata 126  Q
    ||||| ||||||||||||||| ||||||||||||   |||||||||||||||| |||| ||||||||    
T  37283763 cacgggcactcctcggattagacgtgtcccggta---gacacgtgtcgtgtcccacaccgacacata 37283826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 43737759 - 43737831
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||| |||| || ||| |||| || || ||||| ||||||||||||||| ||||||||||||||    
T  43737759 cacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataatta 43737831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 21465534 - 21465471
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||  ||||| ||| |||| || | ||||||||||||||||||||||||||||    
T  21465534 cacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacac 21465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 24669451 - 24669384
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    ||||||||||| ||||||  ||||||||||||| || |||||||||||| ||||||| ||||| ||||    
T  24669451 tcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccgtgtccgtatccatgctttatag 24669384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 29447566 - 29447503
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||| |||||| | ||||||||| |||||||| ||||||||| ||||| |||||    
T  29447566 cacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacac 29447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 34450969 - 34451032
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||| |||| || |||||||| || || ||||||||||||||||||||| |||||    
T  34450969 cacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 29447047 - 29447109
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgaca 122  Q
    ||||||||||||| ||||||| ||||||| ||| || ||||| ||||||||||||||| ||||    
T  29447047 cacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 3951484 - 3951553
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataa 129  Q
    |||||| |||||| ||||||| ||||| || || || ||||||||||||||| ||||| |||||||||||    
T  3951484 cacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataa 3951553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 15023208 - 15023261
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    |||||||||||||||||| ||||| || | |||||||||||||||| |||||||    
T  15023208 ggacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgaca 15023261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 20679346 - 20679415
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||| | || ||||||||||| |||||||||||| | ||| ||||| ||||| ||||||||    
T  20679346 ggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataatta 20679415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 20785506 - 20785575
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtca-gtatcgtgtccgtgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||||||||||||| | || |||||  |||  |||||||||| |||||||||||||||||||    
T  20785506 tcaaattattagcggtgttggcatatccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcatagc 20785575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 22197679 - 22197736
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||| |||||| ||||  ||||| ||||||||||||| ||||||||||    
T  22197679 cacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 4298926 - 4298994
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||| | |||| ||||||| ||| || || |||||||||||| | ||||||||||||||||    
T  4298926 ttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccgtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 31109466 - 31109534
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatata 128  Q
    ||||||||||||||||||||| |||||||| || ||  |||||   | |||||||||||||||||||||    
T  31109466 cacggacactcctcggattaggcgtgtcccagtgtcatacacgacacatgtccgacactgacacatata 31109534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 6065594 - 6065657
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||| | ||||  ||||| ||||| ||||||| ||||||||||||||| ||||||    
T  6065594 cacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacac 6065657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 20873157 - 20873099
Alignment:
Q  83 gtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||| ||||||||||||||| ||||||||||||| ||||| | |||||| | ||||||    
T  20873157 gtgtctcggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaatt 20873099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 22197782 - 22197828
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    |||||||||||||| |||||||||||| |||||| || |||||||||    
T  22197782 ttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccg 22197828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 22651995 - 22651949
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    |||||||||||||| |||| |||||||||||||| || |||||||||    
T  22651995 ttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22651949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 26902112 - 26902170
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacact 118  Q
    |||||||||||||| ||| || |||||||| ||  | ||||||||||||||||||||||    
T  26902112 cacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacact 26902170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 29510344 - 29510390
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    |||||||||||||| |||| |||||||||||||| || |||||||||    
T  29510344 ttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 29510390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 926829 - 926874
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    ||||||||||||  ||||||||||||||||||| || |||||||||    
T  926829 tcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccg 926874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 11803381 - 11803324
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| ||||| || || ||||||| ||||||| ||| ||||    
T  11803381 cacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacac 11803324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 16641921 - 16641974
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||||||  |||||||||| |  ||||| |||||||||||||||    
T  16641921 gacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 17751765 - 17751700
Alignment:
Q  62 cggacactcctcggattagccgtgtcccggtatcggacacgtgtc-gtgtccgacactgacacata 126  Q
    ||||||||||||||||||| ||||||||||| ||||  | | ||| ||||||||||| ||||||||    
T  17751765 cggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 17751700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 17760752 - 17760687
Alignment:
Q  62 cggacactcctcggattagccgtgtcccggtatcggacacgtgtc-gtgtccgacactgacacata 126  Q
    ||||||||||||||||||| ||||||||||| ||||  | | ||| ||||||||||| ||||||||    
T  17760752 cggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacata 17760687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 27213636 - 27213595
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacac 101  Q
    |||||||||| |||||||||||||||||||||| || |||||    
T  27213636 cacggacacttctcggattagccgtgtcccggtgtccgacac 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 40064073 - 40064032
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacac 101  Q
    |||||||||||||||||||||  |||||||||| ||||||||    
T  40064073 cacggacactcctcggattagatgtgtcccggtgtcggacac 40064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 4673465 - 4673525
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg-tgtgcgtatccgt 218  Q
    |||||||||||| | |||| |||||||||||||| || ||||||||| ||| |||||||||    
T  4673465 ttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgt 4673525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 4786286 - 4786358
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||| | | || |||| |||| || ||||| |||| |||||| |||||||| ||||||||||||||    
T  4786286 cacggacactctttgaataagccatgtctcgttatcgaacacatgtcgtatccgacaccgacacatataatta 4786358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 24205756 - 24205820
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacaca 124  Q
    ||||||||||||||||||||| ||||| ||||| || |||| | || |||| |||||| ||||||    
T  24205756 cacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacaca 24205820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 24858122 - 24858070
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||| |||||| ||||||||||  | |||||| |||||||||||||||    
T  24858122 acactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacac 24858070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 40993286 - 40993355
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  40993286 ggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataatta 40993355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 55401186 - 55401105
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||| ||||| | |||||| | ||||||    
T  55401186 cacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaatt 55401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 3631795 - 3631723
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||| ||| ||||||| ||| ||||||| |||||||||||||||||| ||||||||||||    
T  3631795 cacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataatta 3631723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 4987229 - 4987291
Alignment:
Q  61 acggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| |||||    
T  4987229 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 4987291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 27505362 - 27505305
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||||||| |||||    
T  27505362 cacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 35223049 - 35222968
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||||||||||| |  |||||||| || || |||||||||| |||||||||| |||||||||||||| ||| ||||    
T  35223049 cacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaatt 35222968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 10955056 - 10955000
Alignment:
Q  67 actcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||||| |||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacac 10955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 18427060 - 18426988
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||| ||||||  ||||||||||  |||||||||||||| |||||||| |||| |||||||||    
T  18427060 cacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataatta 18426988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 20503576 - 20503504
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||||||||| || |||| ||||||||||| |||| ||||| | ||||||    
T  20503576 cacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaatta 20503504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 34185060 - 34185116
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||| |||||||||    
T  34185060 cacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgaca 34185116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 8789496 - 8789570
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgt--cgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| |||||| |||| || |||| ||||  |||||||||||| ||||||||||||||    
T  8789496 cacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataatta 8789570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 41961587 - 41961650
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||| |||||||||| |||||||| || ||||||||||||||||||||| || |||||    
T  41961587 cacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 15999958 - 16000008
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgt 110  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  15999958 cacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 25065029 - 25064972
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||| ||||||||||||| | |||||||||||| || |||||||||||||||||||||    
T  25065029 cacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacac 25064972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 7171607 - 7171555
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||| ||||||| |||||| |||| ||||||||||||||||||||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacac 7171555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 13845473 - 13845545
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||| |||| || |||||| | || || ||||||| ||||||||||||| ||||||||||||||    
T  13845473 cacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataatta 13845545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 14217014 - 14216951
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||| ||||||||||  ||||||| || ||| ||||||||||||||||||||| ||||    
T  14217014 cacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacac 14216951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 14223143 - 14223080
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||| ||||||||||  ||||||| || ||| ||||||||||||||||||||| ||||    
T  14223143 cacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacac 14223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 24204989 - 24205061
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtc-gtgtccgacactgacacatataatta 132  Q
    ||||||||||||||| ||||| ||||||| ||| ||||||||| ||| ||||||||||| ||||| ||||||||    
T  24204989 cacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac-gacacttataatta 24205061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 28918111 - 28918062
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtcc 112  Q
    |||||||||| ||||||| |||||||| || |||||||||||||||||||    
T  28918111 ggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtcc 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 29508561 - 29508504
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  29508561 cacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacac 29508504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 8383275 - 8383207
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||||||| ||||||||| |||| || |||||||| |||| ||| |||||||| |||||    
T  8383275 tcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 8842440 - 8842368
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| |||||| |  ||||  ||| |||||||||| ||||| |||| |||||||||    
T  8842440 cacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataatta 8842368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 2941632 - 2941597
Alignment:
Q  97 gacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||||||||||||    
T  2941632 gacacgtgtcgtgtccgacaccgacacatataatta 2941597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 6525633 - 6525688
Alignment:
Q  62 cggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||||||||  ||||| |||||||||||| |||| |||||| ||||    
T  6525633 cggacactcctcggattaggtgtgtctcggtatcggacatgtgttgtgtccaacac 6525688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 14747580 - 14747511
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatc--gtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| |||||||||||||| || ||  |||||||| | ||||||||||||||||||    
T  14747580 ttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccggtgtccgtatccgtatccgtgcttcatag 14747511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 14832205 - 14832158
Alignment:
Q  76 attagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||| ||||||||||| ||||||||||||||||||||| || |||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacac 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 21479137 - 21479068
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatc--gtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| |||||||||||||| || ||  |||||||||| ||||||| ||||||||||    
T  21479137 ttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccggtgtccgtgtccgtatccatgcttcatag 21479068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 40052423 - 40052380
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgt 103  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||    
T  40052423 cacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 11252083 - 11252021
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacata 126  Q
    ||||||||||||||||| ||||| ||| |  ||||||||||| ||||| ||||| ||||||||    
T  11252083 gacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacata 11252021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 14216908 - 14216843
Alignment:
Q  162 aaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    ||||||||||  |||| | |||||||||||| || ||||||| |||| || |||||||||||||||    
T  14216908 aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtctgtgtccgcatccgtgcttcatag 14216843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 14223037 - 14222972
Alignment:
Q  162 aaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    ||||||||||  |||| | |||||||||||| || ||||||| |||| || |||||||||||||||    
T  14223037 aaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtctgtgtccgcatccgtgcttcatag 14222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 25775618 - 25775548
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| |||||||||||||||| ||||||| ||| ||||||||  | |||||||||||| ||||| | ||||||    
T  25775618 cacgaacactcctcggattaggcgtgtcctggtgtcggacac--gacgtgtccgacaccgacacttgtaatta 25775548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 45451641 - 45451592
Alignment:
Q  83 gtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||| |||| ||||||| |||||||||||||||| ||||||||| ||||    
T  45451641 gtgtctcggtgtcggacatgtgtcgtgtccgacaccgacacatattatta 45451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 49651724 - 49651777
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccg 113  Q
    |||||||||| ||||||||||  |||||||||| ||||| | ||||||||||||    
T  49651724 cacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg 49651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 4466548 - 4466616
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatata 128  Q
    ||||||||||||||| || ||||||||||| || |||||||| | | || |||||||| | ||||||||    
T  4466548 cacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatata 4466616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 11658833 - 11658785
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgt 208  Q
    ||||||||||| || |||||| ||||||||||| || ||||||||||||    
T  11658833 tcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgtccgtgt 11658785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 23657849 - 23657793
Alignment:
Q  61 acggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||  |||||||||  ||||||||||||||||||  |||| ||||||||||    
T  23657849 acggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacac 23657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 34910428 - 34910396
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggt 92  Q
    ||||||||||||||||||||| |||||||||||    
T  34910428 cacggacactcctcggattagacgtgtcccggt 34910396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 23292934 - 23293006
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| | ||||||    
T  23292934 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaatta 23293006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 3947709 - 3947766
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||    
T  3947709 cacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 49431134 - 49431065
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||| || ||||||||||| | |||||||||||||||||||||| ||||| | ||||||    
T  49431134 ggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaatta 49431065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 12895222 - 12895294
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| |||||||||||||||| ||||||||| | ||||| || ||||||||||||||| ||||| ||||||||    
T  12895222 cacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataatta 12895294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 30838332 - 30838269
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||||| |||| ||||||  ||| |||||||||||||| |||||||||||||||    
T  30838332 cacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacac 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 30982815 - 30982878
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||| | ||||||| ||||||||||| |||||||||||||||||| ||||| |||||    
T  30982815 cacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 28964199 - 28964268
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||| |||||||| || ||||| | |||||||||||||||| ||||| | ||||||    
T  28964199 ggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaatta 28964268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 8423666 - 8423738
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||| ||| |||||| ||||||||||| |||||||  ||||||||||||||| ||||  ||||||||    
T  8423666 cacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataatta 8423738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 12628625 - 12628693
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||| | |||| ||| ||||||||||||| || ||||||| | ||||||||||||||||||    
T  12628625 ttcaaattattaactgtgtcggcatgtcagtgtcagtgtcatgtccgtatccgtatccgtgcttcatag 12628693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 27706114 - 27706170
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    |||| ||| ||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  27706114 cacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgaca 27706170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 34306752 - 34306824
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| ||| ||||| |||||| |||||| |||| |||||||||||||||||||||||| ||||| | ||||||    
T  34306752 cacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaatta 34306824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 35161147 - 35161075
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||  |||||||||  |||| ||||| |||||||||||||||||||||| |||| || ||||||||    
T  35161147 cacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataatta 35161075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 3712461 - 3712504
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgt 103  Q
    |||||||||||||| |||||||||||||||||| ||||||||||    
T  3712461 cacggacactcctcagattagccgtgtcccggtgtcggacacgt 3712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 5414109 - 5414172
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||| |||| ||  ||||||| || || |||||||||||||||||||||||||||    
T  5414109 cacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 22234827 - 22234890
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||| ||||| ||||||||||| |||||| ||| |||||||||||||||||| ||||| |||||    
T  22234827 cacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 36635441 - 36635378
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||| ||||||||| ||||||||||| || ||| ||||||||||| |||||| ||||    
T  36635441 cacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacac 36635378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 715553 - 715603
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgt 110  Q
    ||||||||||||||||||||| |||||||| || ||||||| |||||||||    
T  715553 cacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 752879 - 752929
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgt 110  Q
    ||||||||||||||||||||| |||||||| || ||||||| |||||||||    
T  752879 cacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 20633504 - 20633428
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatc-------gtgtccgtgtgcgtatccgtgcttcatagc 228  Q
    ||||||||||||||||||| | |||||||||||| |||||       |||||||||| |||||||||||||||||||    
T  20633504 ttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcatagc 20633428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 24613638 - 24613700
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgaca 122  Q
    ||||||||||||| ||||||| ||||||| ||| || ||||||||||||||| ||||| ||||    
T  24613638 cacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 28084635 - 28084589
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtc 106  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||    
T  28084635 cacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 14465013 - 14465070
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||| |||||| |||||||| || ||| |||||||||||||| |||||    
T  14465013 cacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 36509051 - 36509112
Alignment:
Q  71 ctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||  ||||||| |||||| ||||||||||| ||||||| | ||||||||||||||    
T  36509051 ctcggattaaacgtgtcctggtatcagacacgtgtcgcgtccgacgccgacacatataatta 36509112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 19312457 - 19312401
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    |||||||||| ||| |||||| |||||| |||| ||||||||||||||| |||||||    
T  19312457 cacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgaca 19312401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 19482790 - 19482738
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtcc 112  Q
    |||| ||||||||||||||||  ||||||| || |||||||||||||||||||    
T  19482790 cacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtcc 19482738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 21945610 - 21945542
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||| |||||  |||| ||||||| ||||| |||||||||| ||||| | ||||||    
T  21945610 gacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaatta 21945542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 28720895 - 28720827
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| ||| |||||||||  || ||||||||||||  |||| ||||||||||||    
T  28720895 ttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtccgtgtctgtatacgtgcttcatag 28720827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 29205579 - 29205527
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtcc 112  Q
    |||| |||||||||||||||| |||||||| || ||||||| |||||||||||    
T  29205579 cacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 40481656 - 40481588
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||  || | ||||||||||||||||| |||||||||||| |||||  ||| |||||||    
T  40481656 ttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccgtgttcgtatttgtgattcatag 40481588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 53381538 - 53381602
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtc-gtgtccgacactgacac 123  Q
    |||||||||||||||||||||  |||||||||| ||||| ||| ||| ||||||||||| |||||    
T  53381538 cacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 4157543 - 4157484
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||| ||||| ||| || |||| ||||||| |||||||||||||||| |||||    
T  4157543 gacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacac 4157484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 32273473 - 32273524
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgac 115  Q
    ||||||||| ||||| | |||||||| |||||||| ||||||||||||||||    
T  32273473 gacactccttggatttgtcgtgtccccgtatcggatacgtgtcgtgtccgac 32273524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 35723426 - 35723471
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgt 206  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||    
T  35723426 tcaaattattagcggtgtcggcgtgtcagtgtca-tgtcgtgtccgt 35723471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 848073 - 848016
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||| |||||||  |||||||||| |  ||||||| |||||||||||||    
T  848073 cacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacac 848016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 2361923 - 2362004
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||| || ||||||  ||||| |||| || |||||| |||||||||||||| ||||| | |||||| | ||||||    
T  2361923 cacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaatt 2362004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 16073502 - 16073433
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||| ||||||   || ||||||| || ||||||||||||| ||||| | ||||||    
T  16073502 ggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaatta 16073433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 21873315 - 21873356
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtc 106  Q
    |||||||| ||||||| ||||||||||| |||||||||||||    
T  21873315 acactccttggattagacgtgtcccggtgtcggacacgtgtc 21873356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 21929176 - 21929217
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtc 106  Q
    |||||||| ||||||| ||||||||||| |||||||||||||    
T  21929176 acactccttggattagacgtgtcccggtgtcggacacgtgtc 21929217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 36635342 - 36635297
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    |||||||||||| |||||||||||||||||||| |  |||||||||    
T  36635342 tcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccg 36635297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 40179595 - 40179656
Alignment:
Q  71 ctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||| ||||||  ||| ||| ||| |||||||||||||||| ||| ||||||||||    
T  40179595 ctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataatta 40179656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 54580006 - 54580043
Alignment:
Q  95 cggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacacttataatta 54580043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 3947806 - 3947874
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| ||| |||| ||||| || | |||||||||| |||||| | |||||||||    
T  3947806 ttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtccgtgtccgtatctgagcttcatag 3947874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 12797286 - 12797358
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| ||| |||||||||||| | ||||||||| || |||| || ||||||||||||| ||||| | ||||||    
T  12797286 cacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaatta 12797358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 17345456 - 17345488
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    |||||||||||||||||| ||||||||||||||    
T  17345456 tcaaattattagcggtgtcggcgtgtcagtgtc 17345488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 24343624 - 24343560
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtc-gtgtccgacactgacac 123  Q
    |||||||||||||| || ||| ||||||||||| ||||||||| ||| ||||| ||||| |||||    
T  24343624 cacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 34589658 - 34589714
Alignment:
Q  67 actcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||| |||| | |||| || || |||| |||||||||||||||||||    
T  34589658 actcctcggattaggcgtgcctcggtgtcagatacgtatcgtgtccgacactgacac 34589714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 40006101 - 40006033
Alignment:
Q  73 cggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||| |||||| |||||||||||| ||||||||| ||| |  |||| ||||||||| || |||||    
T  40006101 cggattaggcgtgtctcggtatcggacatgtgtcgtgttcgatatcgacatatataattacataaaatt 40006033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 5409779 - 5409836
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  5409779 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 15680920 - 15680839
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||||| ||||| |||||| |||| |||||||||||||||||||||||| ||||| |||||||| | ||||||    
T  15680920 cacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaatt 15680839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 598319 - 598238
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||| ||||| || ||||| ||| ||||    
T  598319 cacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaatt 598238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 24105697 - 24105629
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| |||||||||||||| || |||||||||| | ||||||||||||||||||    
T  24105697 ttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtatccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 32287411 - 32287479
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatata 128  Q
    |||||||||||||||||||||  |||||||||| |||||||| |||| |||||||||| ||||||||||    
T  32287411 cacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatata 32287479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 24339764 - 24339701
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||| ||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||    
T  24339764 cacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacac 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 9778616 - 9778559
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||||||    
T  9778616 cacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 21864915 - 21864838
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||  ||||| | |||||| | ||||||    
T  21864915 gacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaatt 21864838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 43027412 - 43027469
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||| |||||    
T  43027412 cacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 21880263 - 21880191
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||| |||||||||| ||||||| ||| ||||||| |||||||||||||||| ||||| | ||||||    
T  21880263 cacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaatta 21880191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 27945059 - 27944991
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||| ||||| |||||||||||||| || |||||||| |||| ||||||||||||||||||    
T  27945059 tcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 26033398 - 26033461
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||| |||| ||||| |||||    
T  26033398 cacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacac 26033461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 32093962 - 32094020
Alignment:
Q  60 cacggacactcctcggattagccgtgtccc-ggtatcggacacgtgtcgtgtccgacac 117  Q
    |||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  32093962 cacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 1433570 - 1433513
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||    
T  1433570 cacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacac 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 13770807 - 13770750
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||| ||||||||| ||||| ||||| |||||||||||| |||||||||||    
T  13770807 cacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 20549902 - 20549830
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||| ||||||||||||||| |||||| |  | ||||||| |||| ||||||||||| ||||||||||||||    
T  20549902 cacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataatta 20549830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 26733411 - 26733343
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||| ||||||||||| ||||| || |||||||||| | |||||||||||||| ||||||| ||||||    
T  26733411 gacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaatta 26733343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 5835353 - 5835286
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||| |||||||||  |||||||||||||| ||||| |||| |||| ||||| ||||||||||||||    
T  5835353 acacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataatta 5835286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 29763137 - 29763187
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgt 110  Q
    ||||||||||||||||||||| ||||||| | | |||||||||||||||||    
T  29763137 cacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 32308237 - 32308179
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||| ||||| |||| ||||||| ||||||||||| |||| |||||    
T  32308237 acactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacac 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 49107839 - 49107773
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcata 226  Q
    |||||||||||||||||| || ||||||| ||| || |||||||| ||| |||||||||| ||||||    
T  49107839 tcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtccttgtccgtatccgtgtttcata 49107773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 2334371 - 2334314
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| |||||  | || ||||||| ||||||||||||||||    
T  2334371 cacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 18212985 - 18213062
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||||||| || |||||||| || || || | | |||||||||||||| |||||||||||||| | ||||||    
T  18212985 gacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaatt 18213062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 104
Target Start/End: Complemental strand, 14729813 - 14729770
Alignment:
Q  61 acggacactcctcggattagccgtgtcccggtatcggacacgtg 104  Q
    |||||||||||||||||||  ||||||||||| |||||||||||    
T  14729813 acggacactcctcggattaagcgtgtcccggtgtcggacacgtg 14729770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 17852111 - 17852056
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgac 115  Q
    ||||||||||||||| |||||  ||||| |||| ||||||||||||| ||||||||    
T  17852111 cacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 18215145 - 18215187
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacg 102  Q
    |||||||||||||| |||||| ||||||||||| |||||||||    
T  18215145 cacggacactcctcagattaggcgtgtcccggtgtcggacacg 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 21864825 - 21864755
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg-tgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||||| ||||  | ||||| ||||| || ||||||||| |||| ||||||||||||||||||    
T  21864825 ttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgtgtgtatccgtgcttcatagc 21864755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 40287310 - 40287356
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtc 106  Q
    ||||||||||||||||||||| | ||||||||| ||||||| |||||    
T  40287310 cacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 6490827 - 6490786
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacac 101  Q
    ||||||||||||||||||||  ||||||||||| ||||||||    
T  6490827 cacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 11722139 - 11722184
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    ||||||| |||||||||| |||||||||||||| || |||||||||    
T  11722139 tcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 11722184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 43027509 - 43027578
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| | || | |||||||||||| || |||||||| |||| || |||||||||||||||    
T  43027509 ttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 2034459 - 2034391
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||| ||||| | ||||| ||| || || ||||||| || | |||||||||||||||||||    
T  2034459 tcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagtatccgtatccgtgcttcatagc 2034391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 13585326 - 13585282
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtc 203  Q
    |||||||||||||| |||| ||| ||||||||||| |||||||||    
T  13585326 ttcaaattattagctgtgtcggcatgtcagtgtcaatatcgtgtc 13585282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 14077383 - 14077463
Alignment:
Q  61 acggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||||| | || ||||||| ||| ||||||| | ||||||||  || | ||||| |||||||| ||||||||    
T  14077383 acggacactcctcggttaaggcgtgtcctggtgtcggacatgcgtcgtgtctaactccgacacttataattatattaaatt 14077463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 14387411 - 14387491
Alignment:
Q  61 acggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||||| | || ||||||| ||| ||||||| | ||||||||  || | ||||| |||||||| ||||||||    
T  14387411 acggacactcctcggttaaggcgtgtcctggtgtcggacatgcgtcgtgtctaactccgacacttataattatattaaatt 14387491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 22484136 - 22484064
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||| ||||||| || | |||| || | ||||||| ||||| |||| ||||| ||||||||||||||    
T  22484136 cacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataatta 22484064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 32308138 - 32308106
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    |||||||||||||||||| ||||||||||||||    
T  32308138 tcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 43250115 - 43250059
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtc-gtgtccgac 115  Q
    ||||||||||||||| ||||| ||||||| ||| ||||||||| ||| |||||||||    
T  43250115 cacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgac 43250059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 29163329 - 29163410
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||| ||||| ||| |||||||||||||||||| || | ||||||||||||||||||| |||||||||||||||||| ||||    
T  29163329 cacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaatt 29163410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 5898214 - 5898286
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||| ||| ||||||||||    
T  5898214 cacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataatta 5898286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 37598942 - 37598870
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||||||  | |||||||||||||||||||||||| ||||| ||||||||    
T  37598942 cacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataatta 37598870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 9828166 - 9828103
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||    
T  9828166 cacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 1486656 - 1486709
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  1486656 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 40917871 - 40917808
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||| |||||    
T  40917871 cacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 40181976 - 40181910
Alignment:
Q  66 cactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||| ||||||||||| | |||||||||| ||||||||||| || |||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataatta 40181910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 22515835 - 22515916
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||||||||||| |||||| |||| ||||| | |||||||||||||||| ||||| | |||||| | ||||||    
T  22515835 cacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaatt 22515916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 26830698 - 26830618
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||| ||||| ||||| ||||| |||||||| ||| ||||    
T  26830698 cacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac-gacacttataattacatttaatt 26830618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 46348331 - 46348412
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||| |||||||| || |||||| |||| |||||||||||||||||||||||| ||||| | |||||| | ||||||    
T  46348331 cacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaatt 46348412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 42359397 - 42359469
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||||||||| ||||||||  ||| |||||||||| ||||| | ||||||    
T  42359397 cacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaatta 42359469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 6427586 - 6427531
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgac 115  Q
    ||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||    
T  6427586 cacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 6427531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 47989619 - 47989556
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||| ||||||||| | || |||| |||||||||||||||| |||||    
T  47989619 cacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 5927380 - 5927450
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||||| ||||| ||||||||||||| || |||||||| |||| ||||||||||||| |||||    
T  5927380 ttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatagc 5927450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 1815369 - 1815296
Alignment:
Q  59 tcacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||| |||||||| |||||| ||||||||||| ||||||| |||||||||| ||||| ||||| | ||||||    
T  1815369 tcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaatta 1815296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 16297229 - 16297286
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||  ||||||||||||||    
T  16297229 cacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacac 16297286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 40258884 - 40258953
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||| ||||||| ||| ||||||| |||||||||| ||||| ||||| | ||||||    
T  40258884 ggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaatta 40258953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 6427634 - 6427594
Alignment:
Q  72 tcggattagccgtgtcccggtatcggacacgtgtcgtgtcc 112  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  6427634 tcggattaggcgtgtcccggtatcggacacgtgtcgtgtcc 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 18337440 - 18337368
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||| || | |||||| || |||||||||||| ||||||||||| ||||| | ||||||    
T  18337440 cacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaatta 18337368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 32461401 - 32461465
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacaca 124  Q
    |||||||||| || ||||||| |||||||| || || ||||||||||||||||||||| ||||||    
T  32461401 cacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 6427368 - 6427321
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtg 207  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  6427368 tcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccgtg 6427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 19562567 - 19562626
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||||||  ||||||| || |||||||||||| || ||||||||||||||    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacac 19562626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 36878479 - 36878416
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||||||||| ||||||||||||||  ||   ||||||||| |||||||||||||||||||    
T  36878479 tcaaattattagcggtgtcggcgtgtcagtgtc--ta---tgtccgtgtccgtatccgtgcttcatagc 36878416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 48450627 - 48450674
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgt 206  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||    
T  48450627 ttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccgt 48450674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 398805 - 398851
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||    
T  398805 ttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 398851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 12919056 - 12918986
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataat 130  Q
    |||| ||||| ||||||| ||||||||||| || || |||||||||||||||||| ||  |||||||||||    
T  12919056 cacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataat 12918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 17831572 - 17831640
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatc--gtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||||||| |||||||||||||| |||||  ||||| ||||  |||||||||||||||||    
T  17831572 tcaaattattagcggtgtcggcgtgtcagtgtc-gtatccggtgtctgtgtctgtatccgtgcttcatag 17831640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 52903357 - 52903288
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||| ||| || |||||||||||||| ||||||||    |||||||||||| ||||||||||||||    
T  52903357 cacggacactcttcgaataagccgtgtcccggtgtcggacac---acgtgtccgacaccgacacatataatta 52903288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 17831473 - 17831534
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtc-gtgtccgacactgacac 123  Q
    ||||||||||  |||||| ||||||||||| |||||||| |||| |||||||||||||||||    
T  17831473 ggacactcctaagattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacac 17831534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 51410129 - 51410064
Alignment:
Q  67 actcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||| ||||||| |||||| |||| ||||| |||||||||||||||||| ||||| | ||||||    
T  51410129 actccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaatta 51410064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 10577683 - 10577755
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||| |||| || |||||||| || || |||||| |||||||||| | | ||||||||||||||    
T  10577683 cacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataatta 10577755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 38078701 - 38078772
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatc--gtgtccgtgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||||| |||| | |||||||||||  || ||  |||||||||| |||||||||||||||||||    
T  38078701 ttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtgtccgtatccgtgcttcatagc 38078772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 18190061 - 18190112
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    ||||||||||||||||  |||||||||| |||||||||||| ||||| ||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgaca 18190112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 25934738 - 25934675
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||| |||| || ||| |||| || || ||||||||||||||||||||| |||||    
T  25934738 cacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 2896162 - 2896208
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgt 206  Q
    |||||||||||||||||| |||||||||||||| || | ||||||||    
T  2896162 tcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgt 2896208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 31015140 - 31015090
Alignment:
Q  68 ctcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacact 118  Q
    ||||| ||||||| ||||||||| | || ||||||||||||||||||||||    
T  31015140 ctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacact 31015090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 38078616 - 38078690
Alignment:
Q  67 actcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||||||| ||||||| ||| | | ||| |||||||||||||||| ||||| | |||||| ||| ||||    
T  38078616 actcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaatt 38078690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 5927288 - 5927369
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||||||| |||||| | |||  || | |||||||  |||| |||||||||||||||| | |||||| ||||||||    
T  5927288 cacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaatt 5927369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 5944405 - 5944352
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccg 113  Q
    |||| |||||||||||||||| ||| ||||||| ||||||| |||| |||||||    
T  5944405 cacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccg 5944352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 6415042 - 6415110
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatc--gtgtccgtgtgcgtatccgtgcttcata 226  Q
    |||||| ||||||| ||| |||||||||||||| || ||  |||| ||||| |||||||||||||||||    
T  6415042 tcaaataattagcgatgtcggcgtgtcagtgtccgtgtccggtgttcgtgtccgtatccgtgcttcata 6415110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 8842678 - 8842743
Alignment:
Q  76 attagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||| ||||||| | | ||||| ||||||||||||||||||  | ||||||||||| ||||||||    
T  8842678 attaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattacattaaatt 8842743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 19637872 - 19637807
Alignment:
Q  67 actcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||  | |||||||| ||||| | || ||||||||||||| ||||||||| ||||    
T  19637872 actcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgacacatatgatta 19637807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 34712331 - 34712412
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||| | ||||| |||||||| || | |||||||||||     ||||||||||||||||||||| | ||||||    
T  34712331 cacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacactaaatt 34712412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 6414939 - 6414995
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    |||||||||||||||||| |   ||||| |||| || ||||||||||||||||||||    
T  6414939 cacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgaca 6414995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 6612112 - 6612164
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    ||||||||| ||||||| ||||||| ||| |||||||| | ||||||||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgaca 6612164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 9629837 - 9629893
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    |||||||||| || |||  || ||||||||||| ||||||| |||||||||||||||    
T  9629837 cacggacacttcttggacgagacgtgtcccggtgtcggacatgtgtcgtgtccgaca 9629893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 9690234 - 9690294
Alignment:
Q  73 cggattagccgtgtcccggtatcggacacgtgtc-gtgtccgacactgacacatataatta 132  Q
    |||||||| ||||||||||| ||||||||||||| ||| ||||| | ||||||||| ||||    
T  9690234 cggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacacatatgatta 9690294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 21530780 - 21530728
Alignment:
Q  80 gccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||  || ||||||| |||||||||||||||| ||||| ||||||||    
T  21530780 gccgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataatta 21530728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 22881575 - 22881607
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggt 92  Q
    ||||||||||||||||||||| |||||||||||    
T  22881575 cacggacactcctcggattagacgtgtcccggt 22881607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 40285695 - 40285727
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    ||||||||||||||||||||| |||||||||||    
T  40285695 tcaaattattagcggtgttggtgtgtcagtgtc 40285727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 2438667 - 2438739
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||| | ||||||    
T  2438667 cacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaatta 2438739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 42511330 - 42511390
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactga 120  Q
    |||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||    
T  42511330 cacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacactga 42511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 28596580 - 28596508
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||||||  ||||||  || |||||||||||||||||||||||| ||||| ||||||||    
T  28596580 cacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataatta 28596508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 37419865 - 37419802
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||| |||||    
T  37419865 cacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacac 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 26769633 - 26769579
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccga 114  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  26769633 cacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 26769579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 34993930 - 34994011
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||| |||||||| | ||||| |||||||| || |||||||| |||||||| ||||||||||||||||||||| ||| ||||    
T  34993930 cacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaatt 34994011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 38117107 - 38117164
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  38117107 cacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 38117164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 18840961 - 18841033
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||||||  |||||||||| ||||||| |||||||||| ||||| ||||| | ||||||    
T  18840961 cacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaatta 18841033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 23718044 - 23717977
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||||||| || ||||||||||| || || |||||||||  |||||||||||||||||    
T  23718044 tcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccgtgtctgtatccgtgcttcatag 23717977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 24105716 - 24105649
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||||||| || ||||||||||| || || |||||||||  |||||||||||||||||    
T  24105716 tcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccgtgtctgtatccgtgcttcatag 24105649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 24009406 - 24009340
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacata 126  Q
    ||||||||||||| |||| || |||||||| || || ||||||||||||||||||||| ||||||||    
T  24009406 cacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacata 24009340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 5040845 - 5040764
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||| ||| ||| ||||||||||  |||||||| ||||||||||||||| ||||| | |||||| ||| ||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaatt 5040764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 20539714 - 20539783
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| | |||||||||||| || |||||||| |||| ||||||||||||||||||    
T  20539714 ttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 21091739 - 21091674
Alignment:
Q  162 aaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||||| || ||||||||||| || | ||||||||||  |||||||||||||||||    
T  21091739 aaattattagcggtgtcggtgtgtcagtgtccgtcttgtgtccgtgtttgtatccgtgcttcatag 21091674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 37559088 - 37559007
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||||||||||  ||||| ||||| |||||||||||||  ||||||||| ||||| | |||||| ||| ||||    
T  37559088 cacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaatt 37559007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 15972984 - 15972912
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||| || |||||||||  |||||||||  |||||||||||||||||||||||| ||||| | ||||||    
T  15972984 cacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaatta 15972912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 12224329 - 12224262
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||| ||||||| |||||||| || |||||||||| ||||||||||||| ||||| | ||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaatta 12224262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 19942373 - 19942314
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgaca 122  Q
    |||||||||||||||||| ||||||||||| || ||||| || |||||||||||| ||||    
T  19942373 ggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 21374739 - 21374809
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatc--gtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| ||||||| |||||| || ||  |||||||||| ||||||||||||||||||    
T  21374739 ttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtccgtgtccgtatccgtgcttcatag 21374809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 35056990 - 35056927
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||| |||||| |||||  | || |||||||||||||||||||||||| |||||    
T  35056990 cacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 5367289 - 5367231
Alignment:
Q  74 ggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||| ||||||||||  ||||| | |||||||||||||||| ||||||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataatta 5367231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 27084376 - 27084318
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgaca 122  Q
    |||||||||| |||||| |||||| |||| | |||||||||||||||||||||| ||||    
T  27084376 gacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 11223801 - 11223857
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||| |||||| ||||||||||| || |||| ||||||||||||||||    
T  11223801 cacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacac 11223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 15657983 - 15657930
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    |||||||||||||| ||| ||||||||||  |||||||||||||| ||||||||    
T  15657983 ggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgaca 15657930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 14996264 - 14996332
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| ||| |||||||||| || || |||| | || ||||||||||||||||||    
T  14996264 ttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgtctgcgtccgtatccgtgcttcatag 14996332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 20242679 - 20242747
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||| |||||| || |||||||  || || ||||||||| ||||||||||| ||||||||||||||    
T  20242679 gacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataatta 20242747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 30717467 - 30717523
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    ||||||||||||| ||||||| ||| |||| || ||| |||||||||||||||||||    
T  30717467 cacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgaca 30717523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 37411198 - 37411262
Alignment:
Q  66 cactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataat 130  Q
    ||||||||||| ||| |||||||| || ||||||||| ||||||| |||||  ||||||||||||    
T  37411198 cactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataat 37411262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 192
Target Start/End: Complemental strand, 31018606 - 31018576
Alignment:
Q  162 aaattattagcggtgttggcgtgtcagtgtc 192  Q
    |||||||||||||||||||||||||||||||    
T  31018606 aaattattagcggtgttggcgtgtcagtgtc 31018576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 18276539 - 18276494
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    |||||||||||||||||| ||| | |||||||| ||||||||||||    
T  18276539 tcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccg 18276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 19536438 - 19536507
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||  |||| ||||||||| |||| || |||||||| |||| |||||| |||||||||||    
T  19536438 ttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  162 aaattattagcggtgttggcgtgtcagtgtcagtatcgtg-tccgtgtgcgtatccgtgcttcata 226  Q
    ||||||||||| |||| |||||||||||||| || ||||| || |||| |||||||| ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 21782752 - 21782801
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtg 109  Q
    |||||||||||| | |||||| ||||||||||| | ||||||||||||||    
T  21782752 cacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtg 21782801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 28596483 - 28596426
Alignment:
Q  167 attagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttca 224  Q
    |||||| |||| ||||||||| |||| || |||||||||||| |||||||||| ||||    
T  28596483 attagctgtgtcggcgtgtcattgtccgtgtcgtgtccgtgtacgtatccgtgattca 28596426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 192
Target Start/End: Original strand, 34994016 - 34994049
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    ||||||||||||||||||||||||| ||||||||    
T  34994016 ttcaaattattagcggtgttggcgtatcagtgtc 34994049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 41843553 - 41843500
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||| |  |||||||| || |||||||||||||| |||||||||    
T  41843553 gacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacac 41843500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 44860442 - 44860385
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||| |||||  |||||||| | |||||||| |||||||||| ||||    
T  44860442 cacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacac 44860385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 14996171 - 14996222
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    ||||||||||||||||| ||||| ||||| || ||||||||| ||||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgaca 14996222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 21782859 - 21782927
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    ||||||||||||| |||| |||||||||||||  || |||||||| ||||  |||| ||||||||||||    
T  21782859 tcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtattcgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 22084768 - 22084830
Alignment:
Q  64 gacactcctcggattagccgtgtcccggta---tcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||| ||||||||| |||||||||||    || ||||||||| |||||||||||||||||    
T  22084768 gacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacac 22084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 23058392 - 23058432
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggaca 100  Q
    |||||||||| |||||||||| ||||||||||| |||||||    
T  23058392 cacggacacttctcggattaggcgtgtcccggtgtcggaca 23058432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 27286333 - 27286381
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgt 208  Q
    |||||||||||||| ||| ||||| |||||||| |||||||||| ||||    
T  27286333 tcaaattattagcgttgtcggcgtatcagtgtccgtatcgtgtctgtgt 27286381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  164 attattagcggtgttggcgtgtcagtgtcagtatcgtgtccg-tgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| || |||||||| || |  ||||||||| ||| ||||||||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 12696343 - 12696277
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcat 225  Q
    |||||||||||||| |||| |||||||||||||| || |||||||||||| ||||||||||||||||    
T  12696343 ttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 7378090 - 7378009
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||| ||| |||||||||||||||||| |||||  | ||||||||||||||| |||||||||||||| ||| ||||    
T  7378090 cacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaatt 7378009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 28152209 - 28152137
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||| ||||| | ||||||    
T  28152209 cacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaatta 28152137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 32978847 - 32978919
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||||||| ||||| | ||||||    
T  32978847 cacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaatta 32978919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 34595245 - 34595173
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||||||  |||||||||| || ||||||||||||||||||||| ||||| | ||||||    
T  34595245 cacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaatta 34595173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 17327598 - 17327655
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| |||||||| || || |||||||||||||||||||||    
T  17327598 cacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 8365456 - 8365519
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||| |||||||||||||| |||||||| || ||||||||||||||||||||| || |||||    
T  8365456 cacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 9658895 - 9658832
Alignment:
Q  162 aaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcat 225  Q
    |||||||||||||||| |||||||||||||| || ||||||| ||||  |||||||||||||||    
T  9658895 aaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgtgtctgtatccgtgcttcat 9658832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 10339062 - 10339125
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||| |||||| |||||||| || ||||||| |||||||||||||||| |||||    
T  10339062 cacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 16766819 - 16766756
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||| || ||||||||| ||||||||||| |||||||||||| ||||||||||| |||||    
T  16766819 cacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 3209505 - 3209447
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||||| ||||||| ||| |||||| |||||||||| ||||||||||||    
T  3209505 acactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacac 3209447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 7740730 - 7740680
Alignment:
Q  82 cgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  7740730 cgtgtcctggtatcgggtacgtgtcgtgtccgacactgacacatataatta 7740680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 31385041 - 31384983
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacact 118  Q
    ||||||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||    
T  31385041 cacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacact 31384983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 17841537 - 17841594
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| |||||| | || |||||||| |||||||||||||||    
T  17841537 cacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacac 17841594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 4878053 - 4877982
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||| || || ||||||| |||||||||||||||| ||||| | ||||||    
T  4878053 cacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgacacttgtaatta 4877982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 28715406 - 28715334
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| ||||| |||| ||||| ||||||||||| ||| |||||||||||||||||||| ||||| | ||||||    
T  28715406 cacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaatta 28715334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 7248480 - 7248417
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||| | ||||||||||| |||||||| ||| |||||| |||| |||||    
T  7248480 cacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacac 7248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 8776916 - 8776967
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtc 111  Q
    |||||||||||||||||||||  ||||| |||| ||||||||||||||||||    
T  8776916 cacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 31959178 - 31959111
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcata 226  Q
    |||||||||||||| |||  |||||||||||||  || || ||||||||| |||||||||||||||||    
T  31959178 ttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtccgtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 3398638 - 3398568
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg-tgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||||| |||| |||||||||||||| || |||||| || ||| ||||||| |||||||||||    
T  3398638 ttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatagc 3398568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 8365559 - 8365628
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtc-cgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||  |||| |||||||||||||| || |||||||  |||| ||||||||||||||||||    
T  8365559 ttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 9027196 - 9027151
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    |||||||||||||||||| |||||||||||||| || |||||||||    
T  9027196 tcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 9027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 7265541 - 7265613
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||| ||||||||||||| | | | ||||| ||||||| || | ||||||||||| ||||||||||||||    
T  7265541 cacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataatta 7265613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 7265634 - 7265666
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    |||||||||||||||||||||||||||||||||    
T  7265634 tcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 30851674 - 30851630
Alignment:
Q  97 gacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  30851674 gacacgtgtcgtgtccgacaccgacacatataattacattgaatt 30851630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 30866185 - 30866253
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    ||||||||||||||||||||| ||||| |||||||| || ||||| |||| ||||| ||| ||||||||    
T  30866185 tcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 33001274 - 33001318
Alignment:
Q  97 gacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  33001274 gacacgtgtcgtgtccgacaccgacacatataattacatttaatt 33001318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 8714098 - 8714039
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||| | ||||||||| | ||||| | |||||||||||||||| |||||    
T  8714098 gacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 9107307 - 9107370
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||| |||||||||||||||  |||||||||| ||||||||  || ||||||||||| |||||    
T  9107307 cacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacac 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 24645588 - 24645529
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||| ||||||||| ||||||  ||| |||||||||||||||||| ||||| |||||    
T  24645588 gacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacac 24645529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 31959261 - 31959214
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcg 107  Q
    |||||||||||||||||||||  |||||||||| |||||||| |||||    
T  31959261 cacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg 31959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 9025453 - 9025495
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacg 102  Q
    |||||||||| |||||||||| ||||||||||| |||||||||    
T  9025453 cacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 9629502 - 9629448
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||||||| |||||| | || |||||||| ||| |||||||||||    
T  9629502 ggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Original strand, 21424842 - 21424872
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagt 189  Q
    |||||||||||||||||||||||||||||||    
T  21424842 ttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 5970051 - 5970108
Alignment:
Q  66 cactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||| | ||||||||| | ||||| | |||||||||||||||| |||||    
T  5970051 cactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacac 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 8389416 - 8389457
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacac 101  Q
    |||||||||||||||||||||  |||||||||| ||||||||    
T  8389416 cacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 9027273 - 9027236
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacg 102  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  9027273 acactccttggattagccgtgtcccggtgtcggacacg 9027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 9658991 - 9658918
Alignment:
Q  60 cacggacactcctcgga-ttagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||| ||| |||| ||||| ||||| || |||||||||||||||  |||| |||| |||||||||    
T  9658991 cacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataatta 9658918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 10294225 - 10294172
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||| ||||||| ||||||  || |||||||| |||||||||||||||    
T  10294225 gacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacac 10294172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 10770615 - 10770660
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgt 105  Q
    |||||||||||||| |||||| | |||||||| |||||||||||||    
T  10770615 cacggacactcctcagattaggcatgtcccggcatcggacacgtgt 10770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 10842644 - 10842611
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggta 93  Q
    |||||||||||||||||||||||||||| |||||    
T  10842644 cacggacactcctcggattagccgtgtctcggta 10842611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 12696436 - 12696383
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||| |||| ||  |||||||||| || |||||||||||||||||||||    
T  12696436 gacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 20371151 - 20371219
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatc--gtgtccgtgtgcgtatccgtgcttcata 226  Q
    |||||||||||||||||| ||||||||| |||| || ||  || || |||| |||||||||||||||||    
T  20371151 tcaaattattagcggtgtcggcgtgtcaatgtccgtgtccggtttctgtgtccgtatccgtgcttcata 20371219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 3398729 - 3398677
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||| |||||| ||||| ||||| ||||||| ||||||||||| ||||    
T  3398729 acactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacac 3398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 21068194 - 21068242
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtg 207  Q
    |||| ||||||||| ||||||||||||| ||||| || |||||||||||    
T  21068194 ttcatattattagcagtgttggcgtgtcggtgtctgtgtcgtgtccgtg 21068242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 21395348 - 21395380
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    ||||||||||||||||||||||||||| |||||    
T  21395348 tcaaattattagcggtgttggcgtgtcggtgtc 21395380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 23130414 - 23130466
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||| |||||| | ||||||| |||| ||||||||||||||| |||||    
T  23130414 acactcctcagattaggcatgtcccgatatcagacacgtgtcgtgtctgacac 23130466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 29021011 - 29020951
Alignment:
Q  72 tcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||| |||| | |||| ||| ||||||||||||||||||||  |||| ||||||||    
T  29021011 tcggattaggcgtgcctcggtgtcgaacacgtgtcgtgtccgacacaaacacctataatta 29020951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 34073388 - 34073432
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc 204  Q
    |||||||||||||| ||||||| |||||||||| || ||||||||    
T  34073388 tcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtcc 34073432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 241716 - 241659
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  241716 cacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 241611 - 241567
Alignment:
Q  161 caaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    |||||||||||| |||| |||||||||||||| || |||||||||    
T  241611 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 43564992 - 43564911
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||| |||||||||| ||||||||||  |||||||| ||||||||||||||| ||||| |||||||| | ||||||    
T  43564992 cacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaatt 43564911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 21191004 - 21191076
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||| ||||||||||| ||||| | ||||||    
T  21191004 cacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaatta 21191076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 39268546 - 39268613
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatat 127  Q
    ||||||||||||||||||||| |||||||| || |||||||| |||||||||| |||| |||||||||    
T  39268546 cacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacacatat 39268613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 19820435 - 19820504
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||||||||| || ||||||||||| || |||||||| |||| |||||||||||||||||||    
T  19820435 tcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatagc 19820504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 31084439 - 31084382
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||||||||||||||    
T  31084439 cacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 16304374 - 16304438
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacaca 124  Q
    |||||||| |||||||||||| |||||| |||| |||| |||||||||||||||| |||||||||    
T  16304374 cacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacaca 16304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 21576693 - 21576749
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    ||||||||||||||||||||| |||||||| || || ||||||||||||||||||||    
T  21576693 cacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgaca 21576749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 15382592 - 15382533
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||||||| |||| |||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacac 15382533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 21522872 - 21522809
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||| | ||||||| |||||||||||  ||||||||||||||||||||||| |||||    
T  21522872 cacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 21533438 - 21533375
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||| | ||||||| |||||||||||  ||||||||||||||||||||||| |||||    
T  21533438 cacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacac 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 21542152 - 21542089
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||| |||| ||||| | ||||||||||| |||||||||||||||||||||||| |||||    
T  21542152 cacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  161 caaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||| |||| |||||||||||||| || |||||||| |||| ||||||||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 39698663 - 39698600
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||| |||||| |||| ||||| || ||||||||||||||| |||||    
T  39698663 cacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacac 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 30098448 - 30098387
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgac 121  Q
    |||||||| ||||||||||||  |||||| ||| || |||||||||||||||||||||||||    
T  30098448 cacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgac 30098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 32630687 - 32630764
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||||| |||||  ||||| |  | ||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  32630687 gacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaatt 32630764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 43001916 - 43001859
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| ||||||| ||| |  |||||||||||||||||||||    
T  43001916 cacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 14873633 - 14873577
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||| | ||||||||    
T  14873633 cacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgaca 14873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 17088402 - 17088358
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtg 104  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtg 17088358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 30098986 - 30099058
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| |||||||| |||| || |||||||| || || |||||||||||| |||||||| ||||||||||||||    
T  30098986 cacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataatta 30099058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 30502336 - 30502408
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| ||| |||| ||||||| | |||||| || ||||||| |||||||||||||||| ||||||||||||||    
T  30502336 cacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataatta 30502408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 30542679 - 30542751
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| ||| |||| ||||||| | |||||| || ||||||| |||||||||||||||| ||||||||||||||    
T  30542679 cacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataatta 30542751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 3966625 - 3966562
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||| ||||||||  | | |||||| ||| |||||||||||||||||    
T  3966625 cacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacac 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 6401620 - 6401557
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||| |||| || ||| |||| || || |||||||||||||||||||||||||||    
T  6401620 cacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 17123158 - 17123088
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatt 131  Q
    ||||||||||||||||||||| |||||||| || ||||||| || |||||||| |||| |||| ||||||||    
T  17123158 cacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtccaacaccgacatatataatt 17123088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 18592195 - 18592132
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||| ||| ||||||||||||||| | || ||||||||| ||||||||||| |||||    
T  18592195 cacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacac 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 19579823 - 19579760
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||| |||||||||||||||| ||||||||||| |  ||||  |||||||||||||||||||||    
T  19579823 cacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacac 19579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 26312875 - 26312808
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||  |||||| ||| || ||||||| ||||||||||||| || |||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataatta 26312808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 11686060 - 11686003
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||| ||||||||||| |  ||| | ||||||||||||||||||||||    
T  11686060 cacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacac 11686003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 21194071 - 21194128
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| |||| |||||| || |||| ||||||||||| ||||    
T  21194071 cacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacac 21194128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 23012380 - 23012437
Alignment:
Q  84 tgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    ||||||||| || |||| ||||||||||| |||| |||||||||||||| ||||||||    
T  23012380 tgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaatt 23012437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 17123066 - 17123034
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    |||||||||||||||||||||||||||||||||    
T  17123066 tcaaattattagcggtgttggcgtgtcagtgtc 17123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 23015934 - 23015986
Alignment:
Q  62 cggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccga 114  Q
    ||||||||||||||||||| ||||||||  | |||||||| ||||||||||||    
T  23015934 cggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccga 23015986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 27932341 - 27932289
Alignment:
Q  65 acactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||| ||||| ||||||| ||| || |||||||||||||||||||||    
T  27932341 acactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacac 27932289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 7677819 - 7677764
Alignment:
Q  68 ctcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||| ||||||||||| ||||||| ||| |||||| ||||| |||||    
T  7677819 ctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 18421789 - 18421861
Alignment:
Q  64 gacactcctcggattagccgtgtc----ccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||| ||||||    |||||  |||||| |||||||||||||| | ||||||||||||||    
T  18421789 gacactcctcggattagacgtgtcagtcccggtgccggacatgtgtcgtgtccgacgccgacacatataatta 18421861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 32766880 - 32766943
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||||||| |||||| ||| ||| ||| ||||||||||||||| | |||||| |||||    
T  32766880 cacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacac 32766943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 6247641 - 6247571
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatagc 228  Q
    |||||||||||||  |||| |||||||||||||  ||||||||||| |||| || ||||||| ||||||||    
T  6247641 ttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatagc 6247571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 11685957 - 11685898
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcat 225  Q
    |||||||||||||||||| ||| ||||||||||      |||||||||| ||||||||||||||||    
T  11685957 tcaaattattagcggtgtcggcatgtcagtgtc------gtgtccgtgtccgtatccgtgcttcat 11685898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 19820336 - 19820389
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgaca 116  Q
    |||||||||||||| |||||| ||||||||||| |||||||   |||||||||||||    
T  19820336 cacggacactcctctgattaggcgtgtcccggtgtcggaca---gtcgtgtccgaca 19820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 4105370 - 4105329
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacac 101  Q
    ||||||||||||||||||||| |||||||| ||||| |||||    
T  4105370 cacggacactcctcggattaggcgtgtcccagtatcagacac 4105329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 15410491 - 15410532
Alignment:
Q  162 aaattattagcggtgttggcgtgtcagtgtcagtatcgtgtc 203  Q
    |||||||||||||||| |||||||||||||| || |||||||    
T  15410491 aaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 26716162 - 26716097
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcat 225  Q
    ||||||||||||| |||| ||| ||||| ||||  | |||||||||||| |||||| |||||||||    
T  26716162 tcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccgtgtccgtatcggtgcttcat 26716097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 26985902 - 26985837
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcat 225  Q
    ||||||||||||| |||| ||| ||||| ||||  | |||||||||||| |||||| |||||||||    
T  26985902 tcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccgtgtccgtatcggtgcttcat 26985837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 28588625 - 28588694
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||| ||||||||  ||||||| ||| || || | |||||||||||||||| ||||| ||||||||    
T  28588625 ggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataatta 28588694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 36642704 - 36642756
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||  ||||| ||||||||| | ||||||||||||||||||||||||    
T  36642704 gacactcctccaattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacac 36642756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 42029863 - 42029782
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataattaaattaaatt 141  Q
    |||||||||||||||||| || ||||||   ||  | |||| |||||||||||||||| || ||||||||||| ||| ||||    
T  42029863 cacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaatt 42029782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 42893468 - 42893399
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||  ||||| ||||||| ||| |||||||||||| ||||| ||||| ||||| | ||||||    
T  42893468 ggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaatta 42893399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 6035501 - 6035469
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    |||||||||||||||||| ||||||||||||||    
T  6035501 tcaaattattagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 27144481 - 27144449
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtc 192  Q
    |||||||||||||||||| ||||||||||||||    
T  27144481 tcaaattattagcggtgtcggcgtgtcagtgtc 27144449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 30135332 - 30135264
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||  |||| |||||||| || || || |||||||||||| |||||  |||||||||||    
T  30135332 ttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtccgtgtccgtatatgtgcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 35017154 - 35017110
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtg 104  Q
    ||||||||||||||||||||| ||||||||| | | |||||||||    
T  35017154 cacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 37328783 - 37328844
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||  ||| ||||||||||||  |||  ||||||||||||| |||||    
T  37328783 cacggacactcctcggattaagcgtatcccggtatcgg--acgcatcgtgtccgacaccgacac 37328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 410 - 482
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||| ||||| | ||||||    
T  410 cacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaatta 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 71843 - 71784
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||    
T  71843 gacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 8909 - 8837
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||| ||||||| |||||| |||||| |||| |||||||||||||||||||||||| ||||| | ||||||    
T  8909 cacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaatta 8837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 8817 - 8771
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccg 205  Q
    |||||||||||||| |||| |||||||||||||| || |||||||||    
T  8817 ttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 70389 - 70317
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||| |||||| ||||||||| | ||||| ||| |||||||||||||||||||||||| ||||| ||||||||    
T  70389 cacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataatta 70317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 263309 - 263372
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||| ||||||  ||||||| |||||||||||||| ||||| |||||    
T  263309 cacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacac 263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 23433 - 23371
Alignment:
Q  165 ttattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||| | |||| |||||||||||||| || |||||||||||| ||||||||||||||||||    
T  23433 ttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgtgtccgtatccgtgcttcatag 23371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 192290 - 192356
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcata 226  Q
    ||||||||||| |||||| |||||||||||||| |||||||||| |||| ||||||| || ||||||    
T  192290 tcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtctgtgtccgtatccatgtttcata 192356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 92933 - 92876
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||| ||||||| ||| || |||| ||||||||||||||||    
T  92933 cacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacac 92876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 92825 - 92787
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatc 198  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  92825 tcaaattattagcggtgtcggcgtgtcagtgtccgtatc 92787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 3419 - 3347
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||||||| |||||||| || ||   |||||||| |||||||||||||||| | ||||||    
T  3419 cacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaatta 3347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 17911 - 17979
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||||||| |||||||  ||||  ||||||||||| |||| ||||||||||||||||||    
T  17911 tcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcatag 17979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 3050 - 2999
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtc 111  Q
    ||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||    
T  3050 cacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtc 2999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 53302 - 53239
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    |||||||||| || ||||||  ||||||||||| ||||||||||||| |||||||||| |||||    
T  53302 cacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 4829 - 4879
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgt 110  Q
    ||||||||||||||||||||| |||||||| || ||||||| |||||||||    
T  4829 cacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 3789 - 3843
Alignment:
Q  63 ggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||||||||||||||||| |||||| || | ||||||| ||||||||||||||||    
T  3789 ggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacac 3843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 14638 - 14581
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    |||| ||||||||  |||||| |||||| |||| ||||||||||||||||||||||||    
T  14638 cacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac 14581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 20191 - 20122
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||| |||| ||||||||| |||| || |||||||| |||| |||||| |||||||||||    
T  20191 ttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 4988 - 5056
Alignment:
Q  64 gacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    ||||||||||||||||| | |||| |  | |||||||||||||||||||||||| ||||| | ||||||    
T  4988 gacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaatta 5056  T

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Target: scaffold0246 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 19595 - 19527
Alignment:
Q  159 ttcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtccgtgtgcgtatccgtgcttcatag 227  Q
    |||||||||||||  || | ||||||||||||||||| |||||||||||| |||||  ||| |||||||    
T  19595 ttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccgtgttcgtatttgtgattcatag 19527  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 8572 - 8635
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||| ||||| ||||| || || |||||||||| |||||||||| || |||||    
T  8572 cacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 8712 - 8649
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||| ||||||| ||| |||| || ||||||||||||||||| | |||| |||||    
T  8712 cacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaacacagacac 8649  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 13534 - 13472
Alignment:
Q  61 acggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacactgacac 123  Q
    ||||||||||||||||||||  || ||||| | ||| | |||||||||||||||||| |||||    
T  13534 acggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacac 13472  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 9684 - 9741
Alignment:
Q  60 cacggacactcctcggattagccgtgtcccggtatcggacacgtgtcgtgtccgacac 117  Q
    ||||||||||||||||||||  ||||||||| | || |||| |||||||||| |||||    
T  9684 cacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacac 9741  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 1735 - 1683
Alignment:
Q  80 gccgtgtcccggtatcggacacgtgtcgtgtccgacactgacacatataatta 132  Q
    |||||||||  || ||||||| |||||||||||||||| ||||| ||||||||    
T  1735 gccgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataatta 1683  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 13418 - 13350
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    ||||||||||||  |||| |||||||||||||| || || | ||| |||| ||||||||||||||||||    
T  13418 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatag 13350  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 21909 - 21977
Alignment:
Q  160 tcaaattattagcggtgttggcgtgtcagtgtcagtatcgtgtcc-gtgtgcgtatccgtgcttcatag 227  Q
    ||||||||||||  |||| |||||||||||||| || || | ||| |||| ||||||||||||||||||    
T  21909 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatag 21977  T

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