View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11089_high_22 (Length: 367)

Name: NF11089_high_22
Description: NF11089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11089_high_22
NF11089_high_22
[»] chr4 (53 HSPs)
chr4 (11-198)||(32656332-32656519)
chr4 (269-342)||(8328052-8328125)
chr4 (254-339)||(25717660-25717745)
chr4 (259-341)||(21157833-21157915)
chr4 (257-342)||(25896848-25896933)
chr4 (254-299)||(29126181-29126226)
chr4 (247-311)||(39178177-39178241)
chr4 (257-324)||(19429391-19429458)
chr4 (255-342)||(27123271-27123358)
chr4 (256-303)||(32831438-32831485)
chr4 (255-298)||(38478820-38478863)
chr4 (268-343)||(46797077-46797152)
chr4 (262-341)||(47970361-47970440)
chr4 (268-323)||(50298598-50298653)
chr4 (255-294)||(54426155-54426194)
chr4 (252-330)||(1017104-1017182)
chr4 (267-349)||(46187840-46187922)
chr4 (261-342)||(2996637-2996718)
chr4 (262-311)||(3549481-3549530)
chr4 (268-344)||(4691910-4691986)
chr4 (269-338)||(18628486-18628555)
chr4 (258-311)||(50745686-50745739)
chr4 (255-295)||(26784-26824)
chr4 (255-311)||(2811566-2811622)
chr4 (262-342)||(24370877-24370957)
chr4 (255-342)||(28141682-28141769)
chr4 (255-311)||(28615429-28615485)
chr4 (257-340)||(3639089-3639172)
chr4 (255-342)||(7367973-7368060)
chr4 (255-342)||(11264365-11264452)
chr4 (249-304)||(24193634-24193689)
chr4 (255-294)||(35571550-35571589)
chr4 (255-294)||(44797992-44798031)
chr4 (257-299)||(1075565-1075607)
chr4 (256-342)||(2977896-2977982)
chr4 (252-342)||(6428082-6428172)
chr4 (255-341)||(23582384-23582470)
chr4 (257-307)||(32420979-32421029)
chr4 (264-294)||(42403843-42403873)
chr4 (256-338)||(44320017-44320099)
chr4 (260-342)||(52172789-52172871)
chr4 (258-311)||(18123331-18123384)
chr4 (261-342)||(42641564-42641645)
chr4 (262-295)||(49939877-49939910)
chr4 (254-310)||(22796751-22796807)
chr4 (254-294)||(24169375-24169415)
chr4 (262-322)||(28615608-28615668)
chr4 (267-323)||(29778886-29778942)
chr4 (262-318)||(30338541-30338597)
chr4 (255-307)||(42866167-42866219)
chr4 (275-307)||(51560228-51560260)
chr4 (255-307)||(52333697-52333749)
chr4 (262-306)||(53626852-53626895)
[»] chr1 (50 HSPs)
chr1 (257-349)||(4549462-4549554)
chr1 (257-342)||(18327067-18327152)
chr1 (257-349)||(15581311-15581403)
chr1 (252-311)||(6292587-6292646)
chr1 (254-311)||(21002250-21002307)
chr1 (264-342)||(31517668-31517746)
chr1 (255-336)||(36070251-36070332)
chr1 (255-311)||(7217993-7218049)
chr1 (257-341)||(22416832-22416916)
chr1 (247-311)||(35017677-35017741)
chr1 (256-307)||(6659779-6659830)
chr1 (255-342)||(23373232-23373319)
chr1 (261-312)||(28837278-28837329)
chr1 (255-342)||(32515360-32515447)
chr1 (255-313)||(37241740-37241797)
chr1 (257-338)||(5157140-5157221)
chr1 (255-323)||(4276569-4276637)
chr1 (255-311)||(24460320-24460376)
chr1 (259-315)||(28836968-28837024)
chr1 (301-341)||(37175889-37175929)
chr1 (254-294)||(41505786-41505826)
chr1 (255-311)||(41638227-41638283)
chr1 (255-294)||(2295208-2295247)
chr1 (276-339)||(6031414-6031477)
chr1 (255-294)||(14385712-14385751)
chr1 (255-342)||(28467497-28467584)
chr1 (255-342)||(33723301-33723388)
chr1 (255-313)||(34405250-34405309)
chr1 (254-308)||(3319864-3319918)
chr1 (255-289)||(14576573-14576607)
chr1 (244-342)||(26461849-26461947)
chr1 (256-342)||(30259406-30259492)
chr1 (280-342)||(40485717-40485779)
chr1 (270-344)||(44928125-44928199)
chr1 (257-311)||(46852139-46852193)
chr1 (261-342)||(1662637-1662718)
chr1 (258-299)||(2832079-2832120)
chr1 (259-340)||(3110057-3110138)
chr1 (275-336)||(4118810-4118871)
chr1 (278-311)||(15709944-15709977)
chr1 (255-304)||(32958739-32958788)
chr1 (268-305)||(40591063-40591100)
chr1 (255-311)||(601135-601191)
chr1 (255-287)||(2295310-2295342)
chr1 (255-323)||(3914968-3915036)
chr1 (255-311)||(7576721-7576777)
chr1 (259-311)||(14737649-14737701)
chr1 (262-342)||(38170616-38170696)
chr1 (274-342)||(44422763-44422831)
chr1 (257-341)||(51929383-51929467)
[»] chr6 (40 HSPs)
chr6 (262-349)||(2455867-2455954)
chr6 (253-339)||(7148733-7148819)
chr6 (275-341)||(32976043-32976109)
chr6 (255-312)||(33080497-33080554)
chr6 (255-342)||(2460070-2460157)
chr6 (275-330)||(2732186-2732241)
chr6 (255-294)||(4163265-4163304)
chr6 (255-294)||(4224886-4224925)
chr6 (257-342)||(6907367-6907452)
chr6 (257-338)||(26559160-26559241)
chr6 (247-311)||(1432234-1432298)
chr6 (255-311)||(2457036-2457092)
chr6 (260-312)||(3738195-3738247)
chr6 (254-298)||(4308885-4308929)
chr6 (255-307)||(10016722-10016774)
chr6 (255-299)||(33068521-33068565)
chr6 (246-349)||(281758-281861)
chr6 (255-342)||(8010421-8010508)
chr6 (252-299)||(9732573-9732620)
chr6 (275-342)||(32917261-32917328)
chr6 (255-349)||(7785663-7785757)
chr6 (268-342)||(7931658-7931732)
chr6 (257-299)||(12111074-12111116)
chr6 (255-305)||(31624361-31624411)
chr6 (255-336)||(2455683-2455764)
chr6 (255-292)||(9202904-9202941)
chr6 (254-299)||(9327139-9327184)
chr6 (254-311)||(24838671-24838728)
chr6 (255-312)||(28005475-28005532)
chr6 (255-336)||(28088142-28088223)
chr6 (267-336)||(29052850-29052919)
chr6 (267-320)||(31774463-31774516)
chr6 (268-337)||(34037376-34037445)
chr6 (254-311)||(35070385-35070442)
chr6 (255-311)||(2727802-2727858)
chr6 (258-306)||(6907493-6907541)
chr6 (268-340)||(22742410-22742482)
chr6 (255-311)||(25103217-25103273)
chr6 (278-342)||(27595509-27595573)
chr6 (258-338)||(32171535-32171615)
[»] chr8 (48 HSPs)
chr8 (257-342)||(43393693-43393778)
chr8 (255-338)||(7714310-7714393)
chr8 (266-342)||(30191071-30191147)
chr8 (254-342)||(33553304-33553392)
chr8 (255-342)||(2487927-2488014)
chr8 (255-342)||(11569376-11569463)
chr8 (260-311)||(43504846-43504897)
chr8 (258-308)||(8629211-8629261)
chr8 (264-330)||(24326107-24326173)
chr8 (256-349)||(7878447-7878539)
chr8 (254-311)||(14926900-14926957)
chr8 (255-339)||(16162827-16162911)
chr8 (257-342)||(26410344-26410429)
chr8 (267-323)||(1889066-1889122)
chr8 (255-311)||(34849199-34849255)
chr8 (255-311)||(43045644-43045699)
chr8 (271-342)||(13000359-13000430)
chr8 (255-342)||(43368619-43368706)
chr8 (252-311)||(43385735-43385794)
chr8 (255-310)||(44236742-44236797)
chr8 (256-342)||(4560566-4560652)
chr8 (255-349)||(26479842-26479936)
chr8 (249-299)||(35928643-35928693)
chr8 (255-342)||(7008663-7008749)
chr8 (257-342)||(10218991-10219076)
chr8 (263-311)||(3953897-3953945)
chr8 (268-336)||(7918713-7918781)
chr8 (254-294)||(9130237-9130277)
chr8 (258-305)||(3254317-3254364)
chr8 (255-294)||(30251373-30251412)
chr8 (255-294)||(36963273-36963312)
chr8 (254-293)||(44792769-44792808)
chr8 (260-342)||(6950386-6950468)
chr8 (252-310)||(10488559-10488617)
chr8 (278-340)||(25881357-25881419)
chr8 (252-294)||(42052155-42052197)
chr8 (246-342)||(29699337-29699431)
chr8 (258-311)||(31884862-31884915)
chr8 (255-304)||(34563325-34563374)
chr8 (255-304)||(43043770-43043819)
chr8 (252-349)||(45071431-45071528)
chr8 (255-311)||(5226610-5226666)
chr8 (255-311)||(6526171-6526227)
chr8 (271-331)||(7853687-7853747)
chr8 (255-307)||(9700100-9700152)
chr8 (262-342)||(11952303-11952383)
chr8 (255-299)||(32976480-32976524)
chr8 (275-335)||(44401631-44401691)
[»] chr7 (34 HSPs)
chr7 (257-349)||(12234810-12234902)
chr7 (254-311)||(1418514-1418571)
chr7 (255-342)||(46082100-46082187)
chr7 (255-341)||(31341200-31341286)
chr7 (258-340)||(31751681-31751763)
chr7 (277-342)||(11208510-11208575)
chr7 (255-312)||(29363602-29363659)
chr7 (246-342)||(3610650-3610746)
chr7 (252-295)||(11619074-11619117)
chr7 (255-330)||(30751595-30751670)
chr7 (283-341)||(1431940-1431998)
chr7 (257-311)||(3836604-3836658)
chr7 (252-349)||(46281058-46281153)
chr7 (258-307)||(21073236-21073285)
chr7 (258-311)||(32410635-32410688)
chr7 (254-342)||(9038175-9038263)
chr7 (255-295)||(17944262-17944302)
chr7 (255-311)||(23214950-23215006)
chr7 (255-311)||(33894722-33894778)
chr7 (258-297)||(425745-425784)
chr7 (256-299)||(7513666-7513709)
chr7 (259-338)||(15321707-15321786)
chr7 (258-304)||(529464-529510)
chr7 (262-342)||(25670512-25670592)
chr7 (256-313)||(32791665-32791722)
chr7 (257-342)||(39542221-39542306)
chr7 (257-342)||(44615025-44615110)
chr7 (257-342)||(45859448-45859533)
chr7 (258-342)||(1645622-1645706)
chr7 (267-307)||(8094405-8094445)
chr7 (246-310)||(19624273-19624337)
chr7 (262-298)||(22759269-22759305)
chr7 (255-342)||(25422390-25422475)
chr7 (263-299)||(28810963-28810999)
[»] chr5 (41 HSPs)
chr5 (247-342)||(11297107-11297202)
chr5 (267-342)||(11457162-11457237)
chr5 (257-311)||(10771809-10771863)
chr5 (256-342)||(39257314-39257400)
chr5 (255-347)||(10391401-10391493)
chr5 (255-322)||(14331450-14331517)
chr5 (255-341)||(2568723-2568809)
chr5 (250-311)||(14980604-14980665)
chr5 (255-323)||(11684483-11684551)
chr5 (255-299)||(17368779-17368823)
chr5 (261-349)||(34117473-34117560)
chr5 (246-298)||(36318882-36318934)
chr5 (255-342)||(26004916-26005003)
chr5 (255-309)||(25720336-25720390)
chr5 (268-342)||(32172717-32172791)
chr5 (255-315)||(912566-912626)
chr5 (254-310)||(5377115-5377171)
chr5 (262-350)||(25079494-25079581)
chr5 (262-350)||(25137463-25137550)
chr5 (255-311)||(36326103-36326159)
chr5 (254-330)||(36796625-36796700)
chr5 (262-342)||(38033953-38034033)
chr5 (255-311)||(41535023-41535079)
chr5 (254-310)||(41820123-41820179)
chr5 (255-299)||(42646997-42647041)
chr5 (255-342)||(12459920-12460007)
chr5 (255-294)||(16937802-16937841)
chr5 (257-340)||(32849244-32849327)
chr5 (255-342)||(38047798-38047885)
chr5 (256-310)||(37954783-37954837)
chr5 (257-294)||(2973464-2973501)
chr5 (262-299)||(10125644-10125681)
chr5 (249-349)||(18700441-18700541)
chr5 (255-304)||(29013109-29013158)
chr5 (250-342)||(499645-499737)
chr5 (255-299)||(11095414-11095458)
chr5 (255-299)||(11153365-11153409)
chr5 (258-294)||(22209746-22209782)
chr5 (255-311)||(38104776-38104832)
chr5 (255-311)||(40335792-40335848)
chr5 (255-299)||(42034167-42034211)
[»] chr3 (40 HSPs)
chr3 (257-335)||(24158437-24158515)
chr3 (255-342)||(3775770-3775857)
chr3 (255-342)||(21872214-21872301)
chr3 (261-311)||(22667498-22667548)
chr3 (261-311)||(22724137-22724187)
chr3 (255-339)||(44014717-44014801)
chr3 (249-297)||(1288762-1288810)
chr3 (261-312)||(27795938-27795989)
chr3 (263-342)||(37273198-37273277)
chr3 (255-342)||(43115120-43115207)
chr3 (255-342)||(45541635-45541722)
chr3 (257-311)||(41057250-41057304)
chr3 (261-349)||(24603677-24603765)
chr3 (254-342)||(36646300-36646388)
chr3 (247-311)||(45590746-45590810)
chr3 (255-294)||(20880588-20880627)
chr3 (255-342)||(22232897-22232983)
chr3 (259-342)||(24624274-24624357)
chr3 (255-322)||(25459549-25459616)
chr3 (278-349)||(26542594-26542665)
chr3 (255-290)||(47132432-47132467)
chr3 (255-341)||(11253566-11253652)
chr3 (255-342)||(21574554-21574643)
chr3 (256-294)||(24085258-24085296)
chr3 (252-294)||(24684738-24684780)
chr3 (268-342)||(26330255-26330329)
chr3 (255-321)||(30657371-30657437)
chr3 (253-311)||(36189724-36189782)
chr3 (275-309)||(38971355-38971389)
chr3 (257-311)||(50015981-50016035)
chr3 (253-311)||(50211830-50211888)
chr3 (258-311)||(4359434-4359487)
chr3 (246-338)||(43875533-43875626)
chr3 (255-299)||(3622368-3622412)
chr3 (255-311)||(20210847-20210903)
chr3 (251-299)||(20685682-20685730)
chr3 (268-344)||(31710819-31710895)
chr3 (268-344)||(31711074-31711150)
chr3 (254-294)||(36832206-36832246)
chr3 (255-339)||(49845459-49845543)
[»] chr2 (46 HSPs)
chr2 (262-340)||(25609862-25609940)
chr2 (255-340)||(22878164-22878249)
chr2 (255-311)||(15370242-15370298)
chr2 (254-342)||(30552561-30552649)
chr2 (255-342)||(40943977-40944064)
chr2 (255-341)||(9996803-9996889)
chr2 (257-342)||(28803451-28803536)
chr2 (254-311)||(11513991-11514048)
chr2 (255-311)||(750829-750885)
chr2 (247-299)||(4350797-4350849)
chr2 (255-311)||(6547984-6548040)
chr2 (255-342)||(15120247-15120334)
chr2 (252-311)||(42852618-42852677)
chr2 (255-348)||(13866936-13867029)
chr2 (255-309)||(38767501-38767555)
chr2 (254-311)||(787427-787484)
chr2 (254-299)||(43259942-43259987)
chr2 (255-299)||(10285967-10286011)
chr2 (255-287)||(37434452-37434484)
chr2 (255-307)||(40759259-40759311)
chr2 (254-342)||(43811174-43811262)
chr2 (275-342)||(9878621-9878688)
chr2 (255-341)||(16551758-16551845)
chr2 (255-310)||(29936124-29936179)
chr2 (255-298)||(30990358-30990401)
chr2 (255-294)||(33942018-33942057)
chr2 (257-308)||(40158816-40158867)
chr2 (254-293)||(40837355-40837394)
chr2 (255-342)||(41809164-41809251)
chr2 (255-341)||(6561402-6561488)
chr2 (257-299)||(18179161-18179203)
chr2 (255-317)||(28810371-28810433)
chr2 (255-293)||(40400819-40400857)
chr2 (254-287)||(3312196-3312229)
chr2 (267-340)||(14277824-14277897)
chr2 (250-295)||(27317021-27317066)
chr2 (257-342)||(28933887-28933972)
chr2 (257-294)||(33319737-33319774)
chr2 (255-296)||(33503108-33503149)
chr2 (257-342)||(43985273-43985358)
chr2 (255-339)||(3973609-3973693)
chr2 (254-294)||(30331863-30331903)
chr2 (267-339)||(34728287-34728358)
chr2 (255-299)||(35378451-35378495)
chr2 (255-311)||(37276839-37276895)
chr2 (255-307)||(41170709-41170761)
[»] scaffold0091 (1 HSPs)
scaffold0091 (255-311)||(6027-6083)


Alignment Details
Target: chr4 (Bit Score: 172; Significance: 2e-92; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 11 - 198
Target Start/End: Complemental strand, 32656519 - 32656332
Alignment:
Q  11 cagagaggagcgcgaaaattttaagttagatgatatatgttacctcaagaaagccaagaactttgagtgcatattgccacataagttctccacagaatcc 110  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32656519 cagaaaggagtgggaaaattttaagttagatgatatatgttacctcaagaaagccaagaactttgagtgcatattgccacataagttctccacagaatcc 32656420  T
Q  111 tttagatctaagagttcacagcaaagctttctaattccctgaaatcaataacaagttttagcatcgatatcatctaaagattcataca 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32656419 tttagatctaagagttcacagcaaagctttctaattccctgaaatcaataacaagttttagcatcaatatcatctaaagattcataca 32656332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 8328052 - 8328125
Alignment:
Q  269 tatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||| |||||||||| |||||||||||||| ||||||||||| ||| |||||||  |||||| ||||||||||    
T  8328052 tatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaatttatgacatg 8328125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 339
Target Start/End: Complemental strand, 25717745 - 25717660
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgac 339  Q
    |||||||||||| ||||||| ||||||| ||| | ||||||||||| ||| | ||||| ||| ||||||| |||||||||||||||    
T  25717745 ttgtttggattgtcttatttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgac 25717660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 341
Target Start/End: Complemental strand, 21157915 - 21157833
Alignment:
Q  259 tggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    |||||| |||||||| |||| |||||||| ||||||||||| | ||||||||| ||| ||||||  |||||| ||||||||||    
T  21157915 tggatttgcttatttgagctcatctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacat 21157833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 25896933 - 25896848
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||  ||||||| || ||||||||| |||| ||||||| ||||||||||||| | ||||||| |||| | |||||||||||    
T  25896933 tttggattcacttatttgagtttatctactagcattagcacttgtgagactgtttaggagagcttatagaaatagcttatgacatg 25896848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 29126181 - 29126226
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  29126181 ttgtttggattggcttatttgagcttatctaccggcataagcactt 29126226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 311
Target Start/End: Original strand, 39178177 - 39178241
Alignment:
Q  247 ttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||| |||||||||||| | ||||||||| ||||||||| ||||| ||||||||| |||||||    
T  39178177 ttagagcttgtttggattgacgtatttaagcatatctactgacataaacacttttgacactgttt 39178241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 19429391 - 19429458
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttatt 324  Q
    ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||| | | ||||||||    
T  19429391 tttggattggcttatttgagcttatttactggtataaacacttgtgagactgtttgggagagcttatt 19429458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 27123271 - 27123358
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||  ||||||| |||||||  ||| ||||||| |||| |||||||||||   | ||||||| ||||||||||||||||||    
T  27123271 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatg 27123358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 32831438 - 32831485
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttga 303  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  32831438 gtttggattggctcatttgagcttatctactgacataagcacttttga 32831485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 298
Target Start/End: Complemental strand, 38478863 - 38478820
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcact 298  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  38478863 tgtttggattggcttatttgagcatatctactggcataagcact 38478820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 46797152 - 46797077
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgc 343  Q
    |||||| ||||||| |||| | |||||||||| ||||||||||||  |||||||||||||| | ||| ||||||||    
T  46797152 ttatttgagcttatttacttgtataagcacttgtgagactgtttatgaaagcttattgaaatagcttgtgacatgc 46797077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 47970440 - 47970361
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||| |||||| ||||||||||||| ||||||||||| ||| ||||||  | ||||||||| ||||| |||| ||||||    
T  47970440 attggtttatttgagcttatctactgacataagcacttgtgaaactgttatggaaagcttatggaaactacttgtgacat 47970361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 50298653 - 50298598
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttat 323  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||| ||||| |||||    
T  50298653 ttattttagcttatctactgacataagcacttgtgagactgtttggaaaaacttat 50298598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 54426194 - 54426155
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  54426194 tgtttggattggcttatttgagcttatctactggcataag 54426155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 1017182 - 1017104
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaaca 330  Q
    ||||| |||||||| ||||||| |||| |||||||| ||||| ||||| ||||||||||| ||| | ||||| ||||||    
T  1017182 gtttggttggattgacttatttgagctaatctactgacataaacacttgtgagactgtttggaagaacttatagaaaca 1017104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 46187840 - 46187922
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||||  |  | |||| ||||||| |||||| ||| ||||||    
T  46187840 cttatttgagcttatctactggcataaacacttatgagactgtttaagagggtttatggaaacaatttatgatatgtctataa 46187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 342
Target Start/End: Complemental strand, 2996718 - 2996637
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||| |||||||| | ||||| || || |||||||||||||||||||||||   | |||||||  |||||||||||||||||    
T  2996718 gattagcttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatg 2996637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 3549481 - 3549530
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||| || ||||||| |||||||||||||| |||||||||||    
T  3549481 attggcttattttagtttatctattggcataagcacttatgagactgttt 3549530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 344
Target Start/End: Complemental strand, 4691986 - 4691910
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgttt-agaaaagcttattgaaacaacttatgacatgcc 344  Q
    |||||| ||||||||||||| || || ||||| ||||||| ||| |||||| ||||| ||||||||||||||||||||    
T  4691986 ttatttgagcttatctactgtcacaatcacttgtgagactatttgagaaaa-cttatggaaacaacttatgacatgcc 4691910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 18628486 - 18628555
Alignment:
Q  269 tatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatga 338  Q
    ||||| ||||||||||||| ||||| ||||| ||||||||||| | | |||||||  |||||||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 50745739 - 50745686
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||||||| |||||||||| |||| |||||  ||||||||||||||    
T  50745739 ttggattggcttatttgagcttatctattggcgtaagcctttttgagactgttt 50745686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 26784 - 26824
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagc 295  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  26784 tgtttggattggcttatttgagcttatcaactggcataagc 26824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 2811622 - 2811566
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||| |||| ||||||| || ||||||||||||||||||| || |||||||||||    
T  2811622 tgtttgaattgacttatttgaggttatctactggcataagcatttatgagactgttt 2811566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 24370877 - 24370957
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||| ||||||| |||||||||| | |||||||||| | ||||| |||||   ||| ||||| ||||||||||||||||||    
T  24370877 attgacttatttgagcttatctattcgcataagcacatgtgagaatgtttgataaaacttatggaaacaacttatgacatg 24370957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 28141682 - 28141769
Alignment:
Q  255 tgtttggattggcttatttaagcttatc-tactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||||||||||||||||||| | || |||||||||||||| ||| ||  || | |||| |||||  |||||||||||||||||    
T  28141682 tgtttggattggcttatttaagcttaacttagtggcataagcacttatgacacaattga-aaaaacttatgaaaacaacttatgacatg 28141769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 28615485 - 28615429
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| |||||||||| ||||||||| |||||| ||||| ||||| |||||    
T  28615485 tgtttggattgacttatttaagtttatctactagcataaacacttgtgagattgttt 28615429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 3639089 - 3639172
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    |||||||| |||||||| ||||||||||| | ||||||||| | ||||| | ||| ||| |||| || |||||| |||||||||    
T  3639089 tttggatttgcttatttgagcttatctaccgacataagcacctgtgagattatttggaagagctgatagaaacagcttatgaca 3639172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 7367973 - 7368060
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||| || |||||||| ||||||| | ||| ||||||||||| | | |||| ||  ||||| |||||||||||    
T  7367973 tgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatg 7368060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 11264452 - 11264365
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||||||||||| ||  |||||||| |||||| ||  | ||||||||||| | | ||| ||| ||| ||||||||||||||    
T  11264452 tgtttggattggcttatttgagtctatctactagcataaacatctgtgagactgtttgggagagcatatagaatcaacttatgacatg 11264365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 24193689 - 24193634
Alignment:
Q  249 agagtttgtttggattggcttatttaagcttatctactggcataagcacttttgag 304  Q
    ||||| ||||||||||| ||||||| ||||||||| ||||||||| ||||| ||||    
T  24193689 agagtgtgtttggattgacttatttgagcttatctcctggcataaacacttgtgag 24193634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 35571550 - 35571589
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  35571550 tgtttggattggcttatttgagcttatctactagcataag 35571589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 44798031 - 44797992
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  44798031 tgtttggattggctgatttaagcttatctactgacataag 44797992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 1075607 - 1075565
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcactt 299  Q
    |||| |||||||||||| ||||||||||||||||||| |||||    
T  1075607 tttgaattggcttatttgagcttatctactggcataaacactt 1075565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 342
Target Start/End: Original strand, 2977896 - 2977982
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||  ||||||| |||| ||||| |||||||||||| | ||||||||||||  | ||||||  |||||| |||| ||||||    
T  2977896 gtttggattaacttatttgagctgatctagtggcataagcacgtgtgagactgtttaagagagcttacagaaacagcttaggacatg 2977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 6428172 - 6428082
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||| |||| ||||||| ||||||| || ||| |||||||||| |||||| ||||   | || ||||  |||||||||||||||||    
T  6428172 gtttgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatg 6428082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 341
Target Start/End: Original strand, 23582384 - 23582470
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||||||| ||||||| ||||||| || ||| |||| ||||| ||||||||||| ||| | || || ||||||| |||| ||||    
T  23582384 tgtttggattgacttatttgagcttatttattggtataatcacttatgagactgtttggaagatctcatagaaacaaattattacat 23582470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 32420979 - 32421029
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    ||||||||| ||||||| |||||| ||||| |||||||||||| |||||||    
T  32420979 tttggattgacttatttgagcttacctactagcataagcacttgtgagact 32421029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 294
Target Start/End: Complemental strand, 42403873 - 42403843
Alignment:
Q  264 tggcttatttaagcttatctactggcataag 294  Q
    |||||||||||||||||||||||||||||||    
T  42403873 tggcttatttaagcttatctactggcataag 42403843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 44320099 - 44320017
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatga 338  Q
    ||||||||||| |||||| |||||| ||| |||||||| || || ||||||||||| | | |||||||  |||||| ||||||    
T  44320099 gtttggattggtttatttgagcttacctattggcataaacaattgtgagactgtttgggagagcttatgaaaacaaattatga 44320017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 342
Target Start/End: Complemental strand, 52172871 - 52172789
Alignment:
Q  260 ggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||||||| ||||||  |||||||||||| | || ||||||||||  | ||| |||||  ||||| |||||||||||    
T  52172871 ggattggcttatttgagcttacatactggcataagtatttgtgagactgttggggaaaacttatgaaaacagcttatgacatg 52172789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 18123331 - 18123384
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||||||| |||||||||| |||| |||||  | ||||||||||||    
T  18123331 ttggattggcttatttgagcttatctattggcgtaagccttgttgagactgttt 18123384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 342
Target Start/End: Original strand, 42641564 - 42641645
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||||| ||||||||||||||| | | ||||| ||| |||||||  || | |||||  ||||| |||||||||||    
T  42641564 gattggcttatttgagcttatctactggcgtgaacacttgtgatactgttttcaagaacttatgaaaacaccttatgacatg 42641645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Original strand, 49939877 - 49939910
Alignment:
Q  262 attggcttatttaagcttatctactggcataagc 295  Q
    ||||||||||||||||||||||||| ||||||||    
T  49939877 attggcttatttaagcttatctactagcataagc 49939910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 22796807 - 22796751
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtt 310  Q
    ||||||||||||  |||||| || ||||||||| ||||||||| || ||||||||||    
T  22796807 ttgtttggattgatttatttgagtttatctactagcataagcatttatgagactgtt 22796751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 24169415 - 24169375
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||||||||||||||  || |||||||||||||||||    
T  24169415 ttgtttggattggcttattagagtttatctactggcataag 24169375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 28615668 - 28615608
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagctta 322  Q
    |||||||||||| |||||||||| || |||||||| || | ||||||||| ||| ||||||    
T  28615668 attggcttatttgagcttatctaatgacataagcatttgtaagactgtttcgaagagctta 28615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 323
Target Start/End: Complemental strand, 29778942 - 29778886
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttat 323  Q
    ||||||| ||||||  | ||||||||| ||||| ||||| |||||||||||||||||    
T  29778942 cttatttgagcttacatgctggcataaacacttgtgagattgtttagaaaagcttat 29778886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 30338541 - 30338597
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaag 318  Q
    |||| ||| ||| |||||||||||||| |||| ||||| ||||||||||||| ||||    
T  30338541 attgacttttttgagcttatctactgggataaacacttgtgagactgtttaggaaag 30338597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 42866219 - 42866167
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    ||||||||||||||| ||| || |||| ||||||||||| ||| |||||||||    
T  42866219 tgtttggattggcttgtttgagtttatttactggcataaacacctttgagact 42866167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 307
Target Start/End: Original strand, 51560228 - 51560260
Alignment:
Q  275 agcttatctactggcataagcacttttgagact 307  Q
    ||||||||||||||||||||||||| |||||||    
T  51560228 agcttatctactggcataagcacttatgagact 51560260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 52333749 - 52333697
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    ||||| ||||||||||||| ||||||| ||||| | ||||||||| |||||||    
T  52333749 tgtttcgattggcttatttgagcttatttactgacctaagcacttgtgagact 52333697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 53626895 - 53626852
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagac 306  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||    
T  53626895 attggcttattcaagcttatctactggcataa-cacttgtgagac 53626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 4549462 - 4549554
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    ||||||||||||||||| || ||||||||||||||||||| || ||||||||||| | | ||||||| |||||||||||||||||| ||||||    
T  4549462 tttggattggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctataa 4549554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 18327067 - 18327152
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||| ||| ||| ||| | |||||  |||||||||||||||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaacttatgacatg 18327152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 15581403 - 15581311
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    |||||| | |||||||| ||||||||||||| ||||||||||| ||||| ||||| ||| |||| || |||||||||||||||||| ||||||    
T  15581403 tttggaatagcttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataa 15581311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 6292646 - 6292587
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||    
T  6292646 gtttgtttggattgacttatttgagcttatctactgacataagcacttttgagattgttt 6292587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 21002307 - 21002250
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||    
T  21002307 ttgtttggattggcttatttgagcttatctacttgcataagaacttgtgagactgttt 21002250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 31517668 - 31517746
Alignment:
Q  264 tggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||| | | | |||||  |||||||| ||||||||    
T  31517668 tggcttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatg 31517746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 36070332 - 36070251
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttat 336  Q
    |||||||||||| |||||| |  |||||| ||||||||||||||| ||||||||||||| | | |||||  |||||||||||    
T  36070332 tgtttggattggtttatttgatattatcttctggcataagcacttgtgagactgtttaggagaacttatgaaaacaacttat 36070251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 7217993 - 7218049
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||| ||||| |||||    
T  7217993 tgtttggattgacttatttaagcttatctaccggcataaacacttctgagattgttt 7218049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 22416832 - 22416916
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||||||||||||| |||||||||||||||||||| |||  |||||||| || ||| | ||||   | ||||||||||||||    
T  22416832 tttggattggcttatttgagcttatctactggcataagtactcatgagactgattcgaagaacttagaaatacaacttatgacat 22416916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 35017741 - 35017677
Alignment:
Q  247 ttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||| |||||| ||||||||||||| |||||||||| |||||||| ||||| ||||| |||||    
T  35017741 ttagagcttgtttagattggcttatttgagcttatctattggcataaacacttgtgagattgttt 35017677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 6659830 - 6659779
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    |||||||||| ||||||| |||||||||||| |||||||||||| |||||||    
T  6659830 gtttggattgacttattttagcttatctactagcataagcacttgtgagact 6659779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 23373232 - 23373319
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||| |||| ||||||| | ||| |||||||  |||||||||| ||||| ||||| | | ||||||| ||||||||||||||||||    
T  23373232 tgtttgaattgacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatg 23373319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 28837278 - 28837329
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgttta 312  Q
    ||||||||||||| ||||||||||||| |||||||||||  |||||||||||    
T  28837278 gattggcttatttgagcttatctactgacataagcacttgagagactgttta 28837329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 32515360 - 32515447
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||| || ||||| || |||||||||  ||||||||||| ||||||||||| | | ||||||| |||||| | |||||||||    
T  32515360 tgtttggattagcatatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatg 32515447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 37241740 - 37241797
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttag 313  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||  |||| |||||||    
T  37241740 tgtttggattgacttatttaagcttatctact-gcataagcacttgcgagattgtttag 37241797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 5157221 - 5157140
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatga 338  Q
    ||||||||| ||||||| | ||||||||| | ||||| ||||| ||| ||||||| | | ||||||| ||||||||||||||    
T  5157221 tttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 4276569 - 4276637
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttat 323  Q
    ||||||||||  ||||||| ||||||||| |||||||||||| || | ||||| ||| |||||||||||    
T  4276569 tgtttggatttacttatttgagcttatcttctggcataagcatttgttagactatttggaaaagcttat 4276637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 24460320 - 24460376
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||| | ||||||||||| ||| ||||||| |||||||||||    
T  24460320 tgtttggattgacttatttgaacttatctactgacatgagcacttgtgagactgttt 24460376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 28836968 - 28837024
Alignment:
Q  259 tggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaa 315  Q
    ||||||||| ||| | |||| |||||||| ||||||||||| |||||||||||||||    
T  28836968 tggattggcctatatgagctaatctactgacataagcacttgtgagactgtttagaa 28837024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 37175889 - 37175929
Alignment:
Q  301 tgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  37175889 tgagactgtttagaagagcttatggaaacaacttatgacat 37175929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 41505826 - 41505786
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  41505826 ttgtttggattggcttatttgagcttatctactgacataag 41505786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 41638227 - 41638283
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| |||| || ||| |||||||||||||||||| || |||||||||||    
T  41638227 tgtttggattgtcttaattgagcctatctactggcataagcatttgtgagactgttt 41638283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 2295247 - 2295208
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  2295247 tgtttgaattggcttatttgagcttatctactggcataag 2295208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 6031414 - 6031477
Alignment:
Q  276 gcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgac 339  Q
    |||||| ||||||||||||||||| || || ||||||||| |||||||  ||||| ||||||||    
T  6031414 gcttatttactggcataagcacttgtgcgaatgtttagaagagcttatgaaaacagcttatgac 6031477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 14385712 - 14385751
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  14385712 tgttcggattggcttatttgagcttatctactggcataag 14385751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 28467584 - 28467497
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||| || |||| |||| |||| ||||||| ||||||| ||| | | || |||| |||| |||||||||||||    
T  28467584 tgtttggattgacttatttgagtttatttactagcattagcacttatgagactatttgggagagattatggaaataacttatgacatg 28467497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 33723301 - 33723388
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||| | ||||||||||  ||||| ||||| |||||||| || | ||| ||||| |||||| || ||||||||    
T  33723301 tgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatg 33723388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 34405309 - 34405250
Alignment:
Q  255 tgtttggattggcttattt-aagcttatctactggcataagcacttttgagactgtttag 313  Q
    ||||||||||||||||||| ||  || |||||||| |||||||||| |||||||||||||    
T  34405309 tgtttggattggcttatttgaatattttctactggtataagcacttgtgagactgtttag 34405250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 3319864 - 3319918
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactg 308  Q
    |||||||||||| ||||||| |||||||||||| ||| ||||| || ||||||||    
T  3319864 ttgtttggattgacttatttgagcttatctactagcaaaagcaattatgagactg 3319918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 289
Target Start/End: Original strand, 14576573 - 14576607
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggc 289  Q
    ||||||||||||||||||| |||||||||||||||    
T  14576573 tgtttggattggcttatttgagcttatctactggc 14576607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 342
Target Start/End: Original strand, 26461849 - 26461947
Alignment:
Q  244 tccttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||| || |||||||||||| |||| | ||| |||||| ||||| |||||||||| | ||||||| | | |||||||  ||||||| |||| ||||    
T  26461849 tccttagggtctgtttggattggtttatatgagcatatctattggcacaagcactttttatactgtttggcagagcttatgaaaacaacatatggcatg 26461947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 342
Target Start/End: Original strand, 30259406 - 30259492
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||| ||||||| || ||| |||| ||||||| ||| ||| || ||||||  || ||||||| ||||||||||| ||||||    
T  30259406 gtttggattgacttatttgagtttacctaccggcataaacacatttaaggctgtttgaaagagcttatagaaacaacttacgacatg 30259492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 40485717 - 40485779
Alignment:
Q  280 atctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||  ||||||||||| ||||||||||| | | | |||||||||||| |||||||||||    
T  40485717 atctacttacataagcacttgtgagactgtttgggagaacttattgaaacatcttatgacatg 40485779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 344
Target Start/End: Original strand, 44928125 - 44928199
Alignment:
Q  270 atttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcc 344  Q
    |||| ||||||| |||| | |||||||||| | ||| ||||| ||| | ||||| ||||||||||||||||||||    
T  44928125 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagaaacaacttatgacatgcc 44928199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 46852193 - 46852139
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||| ||||||||| |||||||| |||||||| ||||  |||||||||||    
T  46852193 tttggattgacttatttaaacttatctagtggcataaacactcctgagactgttt 46852139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 342
Target Start/End: Complemental strand, 1662718 - 1662637
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||||| |||||||||||| ||||||| || |  |||||| |||   | ||||||  ||||||||||||||||||    
T  1662718 gattggcttatttgagcttatctactagcataagtacatgcgagactatttgcgagagcttacggaaacaacttatgacatg 1662637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 2832120 - 2832079
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||| |||||||| |||||||||||| ||||||||||||    
T  2832120 ttggattagcttatttgagcttatctactagcataagcactt 2832079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 340
Target Start/End: Complemental strand, 3110138 - 3110057
Alignment:
Q  259 tggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    ||||||||||||||| |||||| ||| || |||||||||||  ||||||||||  || | |||||  ||||||||| |||||    
T  3110138 tggattggcttatttgagcttaactagtgacataagcacttccgagactgtttgtaagaacttatgcaaacaacttgtgaca 3110057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 4118810 - 4118871
Alignment:
Q  275 agcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttat 336  Q
    |||||||||||| | |||| ||||||||||||| |||  || ||||||| ||||||||||||    
T  4118810 agcttatctactagtataaacacttttgagactctttgaaagagcttatagaaacaacttat 4118871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 311
Target Start/End: Complemental strand, 15709977 - 15709944
Alignment:
Q  278 ttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||| ||||||||||||||||||||||||    
T  15709977 ttatctactagcataagcacttttgagactgttt 15709944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 32958788 - 32958739
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgag 304  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||| ||||    
T  32958788 tgtttagattgacttatttgagcttatctactgtcataagcacttgtgag 32958739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 40591063 - 40591100
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgaga 305  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  40591063 ttatttgagcttatttactggcataagcacttttgaga 40591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 601191 - 601135
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| |||| || |||||||||  |  |||||||||||||||||||||||    
T  601191 tgtttggattgacttacttgagcttatctgataacataagcacttttgagactgttt 601135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 287
Target Start/End: Complemental strand, 2295342 - 2295310
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactg 287  Q
    ||||||||||||||||||| |||||||||||||    
T  2295342 tgtttggattggcttatttgagcttatctactg 2295310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 3915036 - 3914968
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttat 323  Q
    |||||| |||||||||||| |  ||||||||||||||||| ||||   ||||| | |||||||||||||    
T  3915036 tgtttgaattggcttatttgaatttatctactggcataaggacttacaagactatctagaaaagcttat 3914968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 7576721 - 7576777
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||| ||||| |||||| ||||||  ||| ||||||||||||    
T  7576721 tgtttggattgacttatttgagcttgtctacttgcataacaactgttgagactgttt 7576777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 14737649 - 14737701
Alignment:
Q  259 tggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||| |||||| ||||||| |||| | |||||||||| |||||||||||    
T  14737649 tggattggtttatttgagcttatttactagaataagcacttgtgagactgttt 14737701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 38170616 - 38170696
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||| ||||||||| ||||| ||||||||| | ||||| |||||||| || | | |||||||  ||||| |||||||||||    
T  38170616 attgacttatttaaccttatatactggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatg 38170696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 44422831 - 44422763
Alignment:
Q  274 aagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||||||| |||| ||||||||||||||| | | | |||||||  ||| | |||||||||||    
T  44422831 aagcttatctactgggataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatg 44422763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 51929383 - 51929467
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||||| ||| ||| ||||||||||||| ||||||||| | ||| ||||||||  | | |||||  ||||| ||||||||||    
T  51929383 tttggattgacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttatgacat 51929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 262 - 349
Target Start/End: Complemental strand, 2455954 - 2455867
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    |||| ||||||| ||||||||||| |||||||||||||  |||| ||||||||| ||||||| |||||||||||||||||||| ||||    
T  2455954 attgacttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataa 2455867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 7148819 - 7148733
Alignment:
Q  253 tttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgac 339  Q
    ||||||||| ||| ||||||| |||||||||| | |||||||||||| ||||| |||| || | ||||||  |||||||||||||||    
T  7148819 tttgtttggtttgacttatttgagcttatctagtcgcataagcacttgtgagagtgttcagcagagcttacggaaacaacttatgac 7148733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 32976109 - 32976043
Alignment:
Q  275 agcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||| |||||||||||| |||| ||||||||||| ||| ||||||| |||||| ||||||||||    
T  32976109 agcttatttactggcataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacat 32976043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 33080497 - 33080554
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttta 312  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  33080497 tgtttggataggcttatttgagcttatttactggcataagcacttgtgagattgttta 33080554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 2460070 - 2460157
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||  ||||||| |||||||  ||| ||||||| |||| |||||||||||   | ||||||| ||||||||||||||||||    
T  2460070 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatg 2460157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 2732186 - 2732241
Alignment:
Q  275 agcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaaca 330  Q
    ||||| ||||||| ||||||||||| ||||||||||| ||||||||||| ||||||    
T  2732186 agcttgtctactgacataagcacttgtgagactgtttggaaaagcttatggaaaca 2732241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 4163304 - 4163265
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  4163304 tgtttggattggcttatttgagcttatctactggcataag 4163265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 4224925 - 4224886
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  4224925 tgtttggattggcttatttgagcttatctactggcataag 4224886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 6907367 - 6907452
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||| |||||| || ||||||||||||  || |||||||||||||  ||  |||||| |||| |||||||| |||||||||    
T  6907367 tttggattgacttattaaaacttatctactggtgtacgcacttttgagaccattcggaaaaggttatggaaacaacatatgacatg 6907452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 26559160 - 26559241
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatga 338  Q
    ||||||||  ||||||| || ||| ||||||||||||||| || ||||||||||| ||| | |||||  |||||||||||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatga 26559241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 1432298 - 1432234
Alignment:
Q  247 ttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||| ||||||||||||| |||||| ||||||||||||  |||||||| || | |||||||||    
T  1432298 ttagagcttgtttggattggtttattttagcttatctactcacataagcaattgttagactgttt 1432234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 2457092 - 2457036
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||||||||| || |||||||| | ||||||||||| | |||||||||    
T  2457092 tgtttggattggcttatttgagattatctaccgacataagcacttgtaagactgttt 2457036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 3738247 - 3738195
Alignment:
Q  260 ggattggcttatttaagcttatctactggcataagcacttttgagactgttta 312  Q
    |||||| ||||||| || ||||||||| |||||||||||| ||||||||||||    
T  3738247 ggattgacttatttgagtttatctactagcataagcacttgtgagactgttta 3738195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 4308929 - 4308885
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcact 298  Q
    |||||||||||||||||||| || |||||||||| ||||||||||    
T  4308929 ttgtttggattggcttatttgagtttatctactgacataagcact 4308885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 10016774 - 10016722
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    |||||||||||| |||||| ||||||||||| ||||||| ||||| |||||||    
T  10016774 tgtttggattggtttatttgagcttatctacaggcataaacacttgtgagact 10016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 33068521 - 33068565
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||    
T  33068521 tgtttggattggcttatttgaacttatctactgacataagcactt 33068565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 349
Target Start/End: Original strand, 281758 - 281861
Alignment:
Q  246 cttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcct 345  Q
    ||||| || ||||||||||| |||| || || |||| || || |||||| |||| ||||||||||| | | |||| || ||| |||||||||||||| ||    
T  281758 cttagggtctgtttggattgacttacttgagattatgtagtgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtct 281857  T
Q  346 ataa 349  Q
    ||||    
T  281858 ataa 281861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 8010508 - 8010421
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||| | |||||||||| |||||||| || || |||||| ||  || | ||||||| ||||||||| ||||||||    
T  8010508 tgtttggattgacttatgtgagcttatctattggcataaacatttgtgagacagtccaggagagcttatagaaacaactcatgacatg 8010421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 299
Target Start/End: Complemental strand, 9732620 - 9732573
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||||| |||||||| || ||||||||||| ||||||||||    
T  9732620 gtttgtttggatttgcttatttgagtttatctactggtataagcactt 9732573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 32917328 - 32917261
Alignment:
Q  275 agcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||| ||||| | |||| ||||| ||||||||||| | | ||||||| ||||||||||||||||||    
T  32917328 agcttacctactagaataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatg 32917261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 7785663 - 7785757
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    ||||||||||| ||||||| |  |||||||||| |||||||||||||| ||||| ||  |  || |||  |||||| ||||||||||| ||||||    
T  7785663 tgtttggattgtcttatttgaatttatctactgacataagcacttttgggactgattgaaggagtttacagaaacagcttatgacatgtctataa 7785757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 7931658 - 7931732
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||| |||| |||| ||||| || |||||| ||||||  ||||||| |||||||  |||||||||||||||||    
T  7931658 ttatttgagctaatctgctggcttacgcacttgtgagaccatttagaagagcttatgaaaacaacttatgacatg 7931732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 12111116 - 12111074
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||    
T  12111116 tttggattgacttatttgagcttatctactagcataagcactt 12111074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 31624411 - 31624361
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgaga 305  Q
    ||||||||||||||||||| ||||||| ||||| |||||||  ||||||||    
T  31624411 tgtttggattggcttatttgagcttatatactgacataagctgttttgaga 31624361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 2455764 - 2455683
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttat 336  Q
    |||||| ||||||| |||| ||||| ||| | | |||||||| || |||||||||||  || ||||||| ||||||||||||    
T  2455764 tgtttgaattggctgatttgagcttttcttcagacataagcatttgtgagactgtttgaaagagcttatggaaacaacttat 2455683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 9202904 - 9202941
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcata 292  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  9202904 tgtttggattgacttatttgagcttatctactggcata 9202941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 9327184 - 9327139
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||||||| |||| || ||||||||||| ||||||||||    
T  9327184 ttgtttggattggctaatttgagtttatctactggtataagcactt 9327139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 24838671 - 24838728
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||  |||||||||||||||   |||||||| |||||| ||||||||||    
T  24838671 ttgtttggattgagttatttaagcttatccggtggcataaacactttcgagactgttt 24838728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 28005475 - 28005532
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttta 312  Q
    ||||| |||| ||| |||| |||||| |||||||||||||||||| | ||||||||||    
T  28005475 tgtttagattagctcatttgagcttacctactggcataagcacttgtaagactgttta 28005532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 28088142 - 28088223
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttat 336  Q
    ||||||||| | ||||||| ||||||| || ||  |||| |||||||||||| |||| |||  |||||| ||||||||||||    
T  28088142 tgtttggatagacttatttgagcttatttattgatataaccacttttgagacagtttggaatggcttatggaaacaacttat 28088223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 336
Target Start/End: Original strand, 29052850 - 29052919
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttat 336  Q
    ||||||| | || ||||||| |||||||||||| ||||||| ||||||| ||||||  || |||||||||    
T  29052850 cttatttgaactaatctactagcataagcacttgtgagactctttagaagagcttacggatacaacttat 29052919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 31774516 - 31774463
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagactgtttagaaaagct 320  Q
    ||||||| || |||||||| ||||||||||||| ||||||||||| ||| ||||    
T  31774516 cttatttgagtttatctaccggcataagcacttatgagactgtttggaagagct 31774463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 34037376 - 34037445
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatg 337  Q
    ||||||||||||| |||  ||||||||||||| || | || ||||||| |||||||  ||||||||||||    
T  34037376 ttatttaagcttaactatcggcataagcacttctgtgtctatttagaagagcttatgaaaacaacttatg 34037445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 35070385 - 35070442
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||  ||||||| ||||||||||||  ||||||||||| || ||||||||    
T  35070385 ttgtttggattttcttatttgagcttatctactaacataagcacttgtgggactgttt 35070442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 2727802 - 2727858
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||||| ||| |||||||||| | |||||| ||||| ||| |||||||    
T  2727802 tgtttggattggcttgtttgagcttatctaatcgcataaacacttgtgacactgttt 2727858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 6907493 - 6907541
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagac 306  Q
    |||||||| ||||||  ||||||| | ||||||||||||||||||||||    
T  6907493 ttggattgacttattagagcttatttgctggcataagcacttttgagac 6907541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 22742482 - 22742410
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    |||||||||  |||||||||| ||||| |||| |||| ||| ||||   ||||||| ||||||||||||||||    
T  22742482 ttatttaagtgtatctactggtataagaacttgtgaggctgcttaggtgagcttatggaaacaacttatgaca 22742410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 25103217 - 25103273
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||| ||||||| |||| |||||||||| ||||||||||| |  |||||||||||    
T  25103217 tgtttgaattggctaatttgagcttatctattggcataagcagtgctgagactgttt 25103273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 27595509 - 27595573
Alignment:
Q  278 ttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||| ||| |||||||||||| ||||||||||| | | |  |||| ||||||||||||||||||    
T  27595509 ttatcaacttgcataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatg 27595573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 32171615 - 32171535
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatga 338  Q
    ||||||||| |||||| | ||||| ||||| |||||||| || |||||||| || | | ||||||  ||||||||||||||    
T  32171615 ttggattggtttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatga 32171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 43393693 - 43393778
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||| |||||||||||||||||||| ||| || ||||||||||||||||| | | ||||||| || |||||||||||||||    
T  43393693 tttggattgacttatttaagcttatctacttgcaaaaacacttttgagactgtttgggagagcttatagatacaacttatgacatg 43393778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 7714393 - 7714310
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatga 338  Q
    ||||||||||| ||||||| ||||||| || || ||||| ||||| ||||||||||| ||||||||| | ||||||||||||||    
T  7714393 tgtttggattgacttatttgagcttatataatgtcataaacacttgtgagactgtttggaaaagcttgtggaaacaacttatga 7714310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 30191071 - 30191147
Alignment:
Q  266 gcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||| || ||||||| |||||||||||||| | ||||||||| | | ||||||| ||||||||||||||||||    
T  30191071 gcttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatg 30191147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 33553392 - 33553304
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| |||||||| ||||||||||    ||||||||||| |||  |||||| ||| ||||||||||| ||||||||||||||    
T  33553392 ttgtttggattagcttatttgagcttatctatcaacataagcacttgtgatgctgtttggaagagcttattgaagcaacttatgacatg 33553304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 2487927 - 2488014
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||||||||||| || | |||||||| ||||||||||| ||||||||||| | | | |||||  ||||||||||| |||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataacatg 2488014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 11569376 - 11569463
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||| |||||||||||   ||||||||| ||||||||| ||||| ||||||||||||  | ||||||| |||||| |||||||||||    
T  11569376 tgttttgattggcttatcagagcttatctgctggcataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatg 11569463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 43504897 - 43504846
Alignment:
Q  260 ggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  43504897 ggattggcttatttaagcttatctactggcttaagcacttgtgtgactgttt 43504846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 8629261 - 8629211
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactg 308  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  8629261 ttggatttgcttatttaagcttacctactggcataagcacttgtgagactg 8629211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 24326173 - 24326107
Alignment:
Q  264 tggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaaca 330  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||| | | ||||||| ||||||    
T  24326173 tggctaatttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaaca 24326107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 349
Target Start/End: Original strand, 7878447 - 7878539
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    |||||||||||||||| |||| ||||||||| ||||||| |||  ||||||||||| | | ||||||| | |||| ||||||||||| ||||||    
T  7878447 gtttggattggcttatctaagtttatctacttgcataagaactaatgagactgtttgggagagcttatag-aacagcttatgacatgtctataa 7878539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 14926900 - 14926957
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||| ||||||| | ||||| ||||||||||||||||| |||||||||||    
T  14926900 ttgtttggattgacttatttgaacttatttactggcataagcacttgtgagactgttt 14926957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 16162911 - 16162827
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt-agaaaagcttattgaaacaacttatgac 339  Q
    ||||||||||||||||||| || ||||||||| |||||| ||||| ||||||||||| |||||| |||||  ||||| ||||||||    
T  16162911 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaa-cttatgaaaacagcttatgac 16162827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 26410429 - 26410344
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||||||| ||||| ||||| |||| ||||||||||| |||||||| || | | ||||||| |||||| || ||||||||    
T  26410429 tttggattggcttagttaagtttatcaactgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatg 26410344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 1889066 - 1889122
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttat 323  Q
    ||||||| || |||||||||||||||| ||||||||||||||||| | |||||||||    
T  1889066 cttatttgagtttatctactggcataaacacttttgagactgtttgggaaagcttat 1889122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 34849255 - 34849199
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||| ||||| |||||||| |||||| ||||||||||||| ||||||||||||||||    
T  34849255 tgttcggattagcttatttgagcttagctactggcataagtacttttgagactgttt 34849199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 43045644 - 43045699
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||||||||||||||||||||||| ||||||| | || |||||||||||    
T  43045644 tgtttggattggcttatttaagcttatctactagcataag-atttgtgagactgttt 43045699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 342
Target Start/End: Original strand, 13000359 - 13000430
Alignment:
Q  271 tttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||| |||||||||||||||||| ||||||| |||  || || |||| | ||||||||||||||||    
T  13000359 tttaagcttacctactggcataagcacttgtgagactatttgcaagagtttatggtaacaacttatgacatg 13000430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 43368619 - 43368706
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||| | ||||||||||  |||||||| || |||||||| ||  || |||||||  |||||||||||||||||    
T  43368619 tgtttggattgacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgacatg 43368706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 311
Target Start/End: Complemental strand, 43385794 - 43385735
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||| ||| |||| ||||| ||||||||||||||||||||||||| | |||||||||||    
T  43385794 gtttgattgaattgacttatctaagcttatctactggcataagcacctgtgagactgttt 43385735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 44236742 - 44236797
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtt 310  Q
    ||||||||||  ||||||| || |||||||||||||||||||||| ||||||||||    
T  44236742 tgtttggattaccttatttgagtttatctactggcataagcacttgtgagactgtt 44236797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 342
Target Start/End: Complemental strand, 4560652 - 4560566
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||| ||||||| |||||||||| || ||||||||||| ||||  ||||| ||| | ||||| |||| ||||||| |||||    
T  4560652 gtttggattgacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatggaaataacttataacatg 4560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 26479936 - 26479842
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    ||||||||||| |||||||||||||||||| || || ||| |||| ||| ||| |||   | ||||||| ||||||||||||| |||| ||||||    
T  26479936 tgtttggattgacttatttaagcttatctattgacacaaggacttgtgaaactatttgcgagagcttatggaaacaacttatgtcatgtctataa 26479842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 35928643 - 35928693
Alignment:
Q  249 agagtttgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||| ||||||||||| ||||||| ||||||||||||| |||||||||||    
T  35928643 agagtctgtttggattgtcttattttagcttatctactgacataagcactt 35928693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 7008749 - 7008663
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttaga-aaagcttattgaaacaacttatgacatg 342  Q
    |||||| |||| ||||||| || |||||||||||||||||||||| ||||||   ||||| | ||||||| |||||||| |||||||||    
T  7008749 tgtttgaattgacttatttgagtttatctactggcataagcacttgtgagac--gttagagagagcttatagaaacaacctatgacatg 7008663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 10219076 - 10218991
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||| |||||| |||||||   ||||||||||||||| |||| |||||||||| | ||| |  ||||||||||| |||||    
T  10219076 tttggattggtttatttgagcttattacctggcataagcacttgtgaggctgtttagaagaacttgtaaaaacaacttatcacatg 10218991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 3953945 - 3953897
Alignment:
Q  263 ttggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| |||||||    
T  3953945 ttggcttatttgagcctatctactggcataagcacttgtgaaactgttt 3953897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 7918713 - 7918781
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttat 336  Q
    |||||||| |||||||||| |||||| ||||| ||||||||||| | | |||||||  |||||||||||    
T  7918713 ttatttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 9130237 - 9130277
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  9130237 ttgtttggattagcttatttgagcttatctactggcataag 9130277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 3254364 - 3254317
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgaga 305  Q
    ||||||||| ||| || ||||||||||||||||||||||||| |||||    
T  3254364 ttggattggtttacttgagcttatctactggcataagcacttgtgaga 3254317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 30251373 - 30251412
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  30251373 tgtttggattggcttatttgagcttatctactgacataag 30251412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 36963273 - 36963312
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  36963273 tgtttggattggcttatttgagctaatctactggcataag 36963312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 44792808 - 44792769
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataa 293  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  44792808 ttgtttggattggcttatttgagcttatctactgggataa 44792769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 342
Target Start/End: Complemental strand, 6950468 - 6950386
Alignment:
Q  260 ggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||| ||||||| || |||||||||||||||| || || ||||| ||||| | | |||||||  ||||||| |||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatg 6950386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 310
Target Start/End: Complemental strand, 10488617 - 10488559
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtt 310  Q
    |||||||||||||||||||||| |||||||| |||  ||||| ||| | ||||||||||    
T  10488617 gtttgtttggattggcttatttgagcttatcaactaacataaacacatgtgagactgtt 10488559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 25881357 - 25881419
Alignment:
Q  278 ttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    |||||||||| |||||| |||| |||||||||||  || ||||||  ||||||||||||||||    
T  25881357 ttatctactgacataagtacttgtgagactgtttgaaagagcttagagaaacaacttatgaca 25881419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 42052197 - 42052155
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||    
T  42052197 gtttgtttggattgacttatctaaacttatctactggcataag 42052155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 29699431 - 29699337
Alignment:
Q  246 cttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||  ||||||||||| ||||||| ||||| ||| |||||||||  ||  |||||||||||| | | | ||||| ||||||||||||| ||||    
T  29699431 cttagagcctgtttggattgacttatttgagcttctctgctggcataa--acagttgagactgtttgggagaacttatagaaacaacttatggcatg 29699337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 31884862 - 31884915
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||  |||||| |||||||||||| |||||||||||| ||||| |||||    
T  31884862 ttggattgcgttatttgagcttatctactagcataagcacttgtgagagtgttt 31884915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 34563374 - 34563325
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgag 304  Q
    ||||||||| | |||||||||| ||||||||  |||||||||||||||||    
T  34563374 tgtttggatcgacttatttaagtttatctacatgcataagcacttttgag 34563325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 43043819 - 43043770
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgag 304  Q
    ||||||||||| ||| ||| |||||||| |||||||||||||||| ||||    
T  43043819 tgtttggattgacttgtttgagcttatcaactggcataagcacttgtgag 43043770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 349
Target Start/End: Complemental strand, 45071528 - 45071431
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    |||||||||||||||||||| | | |||||||| || |||||  | ||  ||| |||||| | | |||||||  ||||||||||||||||| ||||||    
T  45071528 gtttgtttggattggcttatctgaacttatctaatgacataaaaaattgggaggctgtttcggagagcttatgaaaacaacttatgacatgtctataa 45071431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 5226666 - 5226610
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||| ||||| | |||||| | |||||||||| |||||||||||| |||||||||||    
T  5226666 tgttaggatttgtttatttgatcttatctacttgcataagcacttatgagactgttt 5226610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 6526171 - 6526227
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||  ||| ||||||||||||||||| ||| ||||| |||||    
T  6526171 tgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgttt 6526227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 331
Target Start/End: Complemental strand, 7853747 - 7853687
Alignment:
Q  271 tttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaa 331  Q
    |||||| ||||||||| |||||||||||| |||||| ||||   ||||||||| |||||||    
T  7853747 tttaagtttatctacttgcataagcacttatgagaccgtttgagaaagcttatggaaacaa 7853687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 9700152 - 9700100
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    ||||||||||  ||||||| |||||||||||| |||||| ||||| |||||||    
T  9700152 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagact 9700100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 11952303 - 11952383
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||| |||||||||||| ||||||| ||||||| ||||  |||||||||  | | | ||||| ||||||| ||||||||||    
T  11952303 attgacttatttaagctgatctactagcataagtacttgagagactgttcgggataacttatggaaacaaattatgacatg 11952383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 32976524 - 32976480
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||  ||||||| ||||||||||||| |||||||||||    
T  32976524 tgtttggattcccttatttgagcttatctactgacataagcactt 32976480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 44401691 - 44401631
Alignment:
Q  275 agcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaactta 335  Q
    ||||||||||||||||||  ||||| ||||||||||| | | || |||| |||||||||||    
T  44401691 agcttatctactggcatatacacttgtgagactgtttgggatagtttatagaaacaactta 44401631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 12234810 - 12234902
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    ||||||||| |||| || ||||||||||||||||| ||||| | |||||||| || ||| ||||||| |||||||||||||||||| ||||||    
T  12234810 tttggattgacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataa 12234902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 1418571 - 1418514
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||    
T  1418571 ttgtttggattgacttatttgagcttatctactggcataagcacttatgaggctgttt 1418514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 46082187 - 46082100
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||||||| |||| | |||| |||||||||||| || ||||||||||||| |  | |||||||  |||||||||||||||||    
T  46082187 tgtttggattggctaatttgatcttacctactggcataaacaattttgagactgttaatgagagcttatgaaaacaacttatgacatg 46082100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 31341286 - 31341200
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||||||| ||||||| ||||| |||||| |||||| ||||||| ||||||||| | | || |||| ||||||||| |||||||    
T  31341286 tgtttggattgacttatttgagcttttctacttgcataaacacttttaagactgtttgggagagtttatggaaacaactaatgacat 31341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 31751681 - 31751763
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    |||||||| ||||||||| ||||| || |  |||||||| || |||||||||||| || ||||||| ||||||||||||||||    
T  31751681 ttggattgacttatttaaacttatgtagtcacataagcatttgtgagactgtttataagagcttatggaaacaacttatgaca 31751763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 342
Target Start/End: Complemental strand, 11208575 - 11208510
Alignment:
Q  277 cttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||| | ||| ||||||||||||||||||    
T  11208575 cttatctactgtcataagcacttttcagaatgtttaggaaaacatatagaaacaacttatgacatg 11208510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 29363659 - 29363602
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttta 312  Q
    ||||||||||||||||||| | ||||||||||  ||||||||||| ||||||||||||    
T  29363659 tgtttggattggcttatttgaacttatctactaacataagcacttgtgagactgttta 29363602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 3610650 - 3610746
Alignment:
Q  246 cttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||  |||||| |||||||||||| ||||||||||||||| ||| ||||| ||| ||| ||| | ||| ||||| |||||| || ||||||||    
T  3610650 cttagagcctgtttgaattggcttatttgagcttatctactggcctaaccacttgtgatactttttgggaaaccttatggaaacagctaatgacatg 3610746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 11619074 - 11619117
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagc 295  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  11619074 gtttgtttggattggcttatttgagcttatctactgacataagc 11619117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 30751670 - 30751595
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaaca 330  Q
    ||||||||||  ||||||||| ||||||||||| ||||||||||| || |||||||| | | ||||||| ||||||    
T  30751670 tgtttggattaacttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttatagaaaca 30751595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 341
Target Start/End: Original strand, 1431940 - 1431998
Alignment:
Q  283 tactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||||||||||||| ||||||||||||| | ||||||| |||||| | ||||||||    
T  1431940 tactggcataagcacttgtgagactgtttaggagagcttatggaaacatcatatgacat 1431998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 3836604 - 3836658
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||| ||| |||||||    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgttt 3836658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 349
Target Start/End: Original strand, 46281058 - 46281153
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    |||||||||||||||||||||| | ||||||||||  ||||| ||||||||||  |||||  || || |||  ||||||||||||| |||| ||||||    
T  46281058 gtttgtttggattggcttatttgaacttatctactaacataaacacttttgag--tgtttgaaagagtttacggaaacaacttatgccatgtctataa 46281153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 21073285 - 21073236
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    ||||||| |||||||||||||||||||||| |||||||| || |||||||    
T  21073285 ttggatttgcttatttaagcttatctactgacataagcaattgtgagact 21073236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 32410688 - 32410635
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||||||| |||||||||| ||||||||||| || ||| |||||||    
T  32410688 ttggattggcttatttgagcttatctattggcataagcatttgtgaaactgttt 32410635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 9038263 - 9038175
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||| ||||||||| || | | ||||||| ||||||||||||| ||||| |||| |||| | |||||  ||||| |||||||||||    
T  9038263 ttgtttgaattggcttagttgaacctatctacaggcataagcacttatgagaatgttcagaagaacttataaaaacagcttatgacatg 9038175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 17944262 - 17944302
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagc 295  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  17944262 tgtttggagtgacttatttaagcttatctactggcataagc 17944302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 23215006 - 23214950
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||| | |||||||||| |||||| ||||| |||||||||||    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgttt 23214950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 33894778 - 33894722
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||| |||||||| |||||||| | || ||||||||||| |||||||||||    
T  33894778 tgtttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgttt 33894722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 297
Target Start/End: Original strand, 425745 - 425784
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcac 297  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  425745 ttggattggcttatttgagattatctactggcataagcac 425784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 7513709 - 7513666
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||| |||| ||||||| |||||||||||||||||||||||||    
T  7513709 gtttgaattgacttatttgagcttatctactggcataagcactt 7513666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 15321707 - 15321786
Alignment:
Q  259 tggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatga 338  Q
    ||||||| ||||||| ||||||| ||||| | ||||||||||||||| ||||| | | || ||||  |||||||||||||    
T  15321707 tggattgacttatttgagcttatttactgacttaagcacttttgagattgttttggatagtttatgaaaacaacttatga 15321786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 529510 - 529464
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgag 304  Q
    |||||||| ||||||| ||||||||||||||||||| ||||| ||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgag 529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 25670512 - 25670592
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgttt-agaaaagcttattgaaacaacttatgacatg 342  Q
    |||| |||| || |||||||||| || ||||||| ||| ||||||||||| |||||| |||||  |||||||||||||||||    
T  25670512 attgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaa-cttatgaaaacaacttatgacatg 25670592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 32791665 - 32791722
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttag 313  Q
    ||||||||||||||||   |||||||||||| |||||||||||  ||||||| |||||    
T  32791665 gtttggattggcttatcagagcttatctactagcataagcactagtgagactatttag 32791722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 39542221 - 39542306
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||| ||| ||||||| || ||||||||| ||||||||||||  ||||| ||||   | ||||||| |||| |||||||||||||    
T  39542221 tttgggttgacttatttgagtttatctactagcataagcacttgcgagacagttttagagagcttatggaaataacttatgacatg 39542306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 44615025 - 44615110
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||| |||| || |||||||||||| |||||| |||||   | |||||| || | |||||||  |||||||||||||||||    
T  44615025 tttggattgccttaattgagcttatctactagcataaccacttgcaaaactgttcaggagagcttatgaaaacaacttatgacatg 44615110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 45859448 - 45859533
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||| | |||||||||| | |||||||  |||| || ||| ||||||||||| ||| ||||||  |||||||| |||||||||    
T  45859448 tttggatagacttatttaagttaatctacttacataggctcttgtgagactgtttggaagagcttacggaaacaacatatgacatg 45859533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 1645622 - 1645706
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||| |||||| || |||||||||| |||||||| || ||  ||||| | | ||| |||||  |||||||||||||||||    
T  1645622 ttggattggattattttagtttatctactgacataagcaattgtggcactgtctgggaaaacttatgtaaacaacttatgacatg 1645706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 8094445 - 8094405
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagact 307  Q
    ||||||| |||||||||||| |||||||||||| |||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagact 8094405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 19624337 - 19624273
Alignment:
Q  246 cttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtt 310  Q
    ||||| |||||||||| ||| ||||||| || ||||||| || ||||||||||| ||| ||||||    
T  19624337 cttagggtttgtttggcttgacttatttgagtttatctattgacataagcacttgtgaaactgtt 19624273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 22759305 - 22759269
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcact 298  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  22759305 attgacttatttgagcttatctactggcataagcact 22759269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 25422475 - 25422390
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||||||||||| |  |||||| | |||   ||||||||||| | | ||||||| |||||| |||||||||||    
T  25422475 tgtttggattgacttatttaagcttatat--tggcattaacaccactgagactgtttgggagagcttatggaaacaccttatgacatg 25422390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 28810963 - 28810999
Alignment:
Q  263 ttggcttatttaagcttatctactggcataagcactt 299  Q
    |||| |||||||||||||| |||||||||||||||||    
T  28810963 ttggattatttaagcttatttactggcataagcactt 28810999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 342
Target Start/End: Original strand, 11297107 - 11297202
Alignment:
Q  247 ttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||| |||||| |||| |||||||||||||||||| |||||||| ||||| | |||||||||  || ||||||| ||||||||||| ||||||    
T  11297107 ttagagtctgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatg 11297202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 267 - 342
Target Start/End: Complemental strand, 11457237 - 11457162
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||| |||||||||| ||||| || ||||| ||||||||||| ||| ||||||| ||||||||||||||||||    
T  11457237 cttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatg 11457162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 10771809 - 10771863
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  10771809 tttggattggcttatttgagcttatctactggcataagcacttgtgagattgttt 10771863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 342
Target Start/End: Original strand, 39257314 - 39257400
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||| |||||||||||||||||||||||  ||||||||||| ||||||||| |   ||||||||  ||||||||| ||||||||    
T  39257314 gtttggactggcttatttaagcttatctactaacataagcacttgtgagactgtgtgcgaaagcttagagaaacaactaatgacatg 39257400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 10391493 - 10391401
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctat 347  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||| ||||| ||||| ||| || ||||  |||||  |||||||||| ||||    
T  10391493 tgtttcgattggcttatttaagcttatctgctggcataatcacttgtgagattgtttggaagagtttataaaaacactttatgacatgtctat 10391401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 14331517 - 14331450
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagctta 322  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||| |||||| ||||| ||||| ||||    
T  14331517 tgtttggattgacttatttgagcttatctactgtcataagcactcttgagattgtttggaaaaactta 14331450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 2568809 - 2568723
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    |||| |||||| ||||||| ||||||||||||||  |||||||||  |||||||||||||| | |||||  ||||| ||||||||||    
T  2568809 tgttcggattgtcttatttgagcttatctactggtgtaagcacttgagagactgtttagaagaacttatgaaaacagcttatgacat 2568723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 14980665 - 14980604
Alignment:
Q  250 gagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||| |||||| || ||||||| |||||||||||||||||||||||| | ||||||||||    
T  14980665 gagtttatttggaatgacttatttgagcttatctactggcataagcactatagagactgttt 14980604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 11684551 - 11684483
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttat 323  Q
    ||||| |||||| |||||| ||||||||||||| ||| ||||||| ||||||||||||  |||||||||    
T  11684551 tgtttagattggtttatttgagcttatctactgtcatgagcacttgtgagactgtttaagaaagcttat 11684483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 17368823 - 17368779
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||    
T  17368823 tgtttggattgacttatttaaacttatctactggcataagcactt 17368779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 34117473 - 34117560
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    ||||||||||||  ||||||||||||||||||| ||||| | ||||||| | | | ||||||| || ||||||||||||||||| ||||    
T  34117473 gattggcttattggagcttatctactggcataaacacttgttagactgtct-ggagagcttatggagacaacttatgacatgcccataa 34117560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 36318934 - 36318882
Alignment:
Q  246 cttagagtttgtttggattggcttatttaagcttatctactggcataagcact 298  Q
    |||||||  ||||||||||| ||||||| ||||||||||||||||||||||||    
T  36318934 cttagagcatgtttggattgtcttattttagcttatctactggcataagcact 36318882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 26004916 - 26005003
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||| | | |||| || ||||| ||||  |||||| |||||| ||||    
T  26004916 tgtttggattgacttattttagcttatctactagcataagcacttgtcaaactgcttggaaaaacttacagaaacagcttatggcatg 26005003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 25720336 - 25720390
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgt 309  Q
    |||||| ||| |||||||| || |||||||||||||||||||||| |||||||||    
T  25720336 tgtttgaattagcttatttgaggttatctactggcataagcacttgtgagactgt 25720390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 32172791 - 32172717
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||| ||||||| |||| |||||||||||| |||||  |||| | | ||||||| ||||||||||||||||||    
T  32172791 ttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatg 32172717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 912566 - 912626
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaa 315  Q
    ||||||||||||||||||| || ||||||| || ||||||||||| ||  |||||||||||    
T  912566 tgtttggattggcttattttaggttatctattgtcataagcacttgtggcactgtttagaa 912626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 5377115 - 5377171
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtt 310  Q
    ||||| |||||||||||||| |||||||||| || ||||||||||| | ||||||||    
T  5377115 ttgttcggattggcttatttgagcttatctattgacataagcacttgtaagactgtt 5377171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 25079494 - 25079581
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataat 350  Q
    |||| ||||||||||  ||||||| | ||||||||||| ||||||| ||| || | | |||| |||||||||||||||||| |||||||    
T  25079494 attgacttatttaagtgtatctacggacataagcacttgtgagactatttggaga-gtttatcgaaacaacttatgacatgtctataat 25079581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 25137463 - 25137550
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataat 350  Q
    |||| ||||||||||  ||||||| | ||||||||||| ||||||| ||| || | | |||| |||||||||||||||||| |||||||    
T  25137463 attgacttatttaagtgtatctacggacataagcacttgtgagactatttggaga-gtttatcgaaacaacttatgacatgtctataat 25137550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 36326159 - 36326103
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||  ||||| |||||    
T  36326159 tgtttggattgtcttattttagcttatctattggcataagcactggtgagattgttt 36326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 36796625 - 36796700
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaaca 330  Q
    |||||||||||| ||||||| |||||||||| || ||||| ||||| |||||||| || ||||| ||| ||||||||    
T  36796625 ttgtttggattgacttatttgagcttatctaatgacataaacacttgtgagactgcttggaaaaactt-ttgaaaca 36796700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 38033953 - 38034033
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||| ||||||| ||||| ||||||||||||||||| | ||||||||||| ||| |  ||||| ||||| |||||| ||||    
T  38033953 attgacttatttgagcttttctactggcataagcacctgtgagactgtttggaagaagttattaaaacagcttatggcatg 38034033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 41535023 - 41535079
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||| |||||||||||| |||| |||||||| ||||||||||| ||| |||||||    
T  41535023 tgtttgaattggcttatttgagctcatctactgccataagcacttgtgacactgttt 41535079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 41820179 - 41820123
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtt 310  Q
    ||||||| |||||||||||| |||||||| || |||||||||||||  |||||||||    
T  41820179 ttgtttgaattggcttatttgagcttatccacgggcataagcacttgagagactgtt 41820123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 42647041 - 42646997
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||    
T  42647041 tgtttggattggcttatttgagcttatctactgacattagcactt 42646997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 12459920 - 12460007
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| |||||||  |||||||| ||| ||||||||| | ||||||||||| | | | | |||  |||||||||||||||||    
T  12459920 tgtttggattgacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatg 12460007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 16937802 - 16937841
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  16937802 tgtttggattggcttatttgagcttatctactagcataag 16937841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 32849327 - 32849244
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    |||| |||| ||||||||||||||||||||  ||||||||||| |||| |||||| | | | |||||  ||| |||||||||||    
T  32849327 tttgaattgacttatttaagcttatctactatcataagcacttgtgaggctgtttgggagaacttatgaaaaaaacttatgaca 32849244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 38047798 - 38047885
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||| |||||||||| || | ||||||||||   ||||| |||| || |||||||| | | ||||||| ||||||||||||||||||    
T  38047798 tgtttagattggcttacttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatg 38047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 37954837 - 37954783
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataagcacttttgagactgtt 310  Q
    |||||||||||||||||| ||||||||||| |||||||  | ||| |||||||||    
T  37954837 gtttggattggcttatttgagcttatctacaggcataaaaaatttagagactgtt 37954783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 2973464 - 2973501
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||||||||||||||||||||||| || ||||||    
T  2973464 tttggattggcttatttaagcttatctagtgacataag 2973501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 299
Target Start/End: Original strand, 10125644 - 10125681
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcactt 299  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  10125644 attggcttatttaagcttatctactgacatgagcactt 10125681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 349
Target Start/End: Complemental strand, 18700541 - 18700441
Alignment:
Q  249 agagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaa-agcttattgaaacaacttatgacatgcctat 347  Q
    |||| |||||||||||| ||||||| | || || |||| | |||||||||| | ||| |||||  ||| ||||||| |||||||||||||||||| ||||    
T  18700541 agagcttgtttggattgccttatttgaactcatatacttg-ataagcacttctaagattgttttaaaagagcttatggaaacaacttatgacatgtctat 18700443  T
Q  348 aa 349  Q
    ||    
T  18700442 aa 18700441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 29013158 - 29013109
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgag 304  Q
    |||||||||||| ||||| |||||||||| ||||||||| ||||| ||||    
T  29013158 tgtttggattggattattgaagcttatctgctggcataaacacttgtgag 29013109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 342
Target Start/End: Original strand, 499645 - 499737
Alignment:
Q  250 gagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||| ||||||||||| ||||||| |||||| |||||| ||||||||| | | || |||||| | | | |||||  ||||| |||||||||||    
T  499645 gagtgtgtttggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatg 499737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 11095414 - 11095458
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    |||||||| ||| |||||||||||||||||||| ||||| |||||    
T  11095414 tgtttggactggtttatttaagcttatctactgacataaacactt 11095458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 11153365 - 11153409
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||||||| ||| |||||||||||| |||||| |||||    
T  11153365 tgtttggattggcttgtttgagcttatctactagcataaacactt 11153409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 22209746 - 22209782
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  22209746 ttggattgacttatttgagcttatctactggcataag 22209782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 38104776 - 38104832
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||| ||||||||||||||||| ||||  ||| |||||| ||| |||||||    
T  38104776 tgtttggatttgcttatttaagcttatcaactgatataggcacttgtgacactgttt 38104832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 40335792 - 40335848
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||| || ||||||||| ||| || ||||| |||||||||||    
T  40335792 tgtttggattgacttatttgagtttatctactcgcacaaacacttgtgagactgttt 40335848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 42034211 - 42034167
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    |||||||||| |||||||| |||||| |||||| |||||||||||    
T  42034211 tgtttggattagcttatttgagcttacctactgacataagcactt 42034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 335
Target Start/End: Original strand, 24158437 - 24158515
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaactta 335  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||| |||||||   | ||||||| |||||||||||    
T  24158437 tttggattggcttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaactta 24158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 3775770 - 3775857
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||| || |||||||||||||||| || || | ||||||||| | | ||||||| |||||||||||| |||||    
T  3775770 tgtttggattgccttatttgagtttatctactggcataaacaattgttagactgtttggcagagcttatagaaacaacttattacatg 3775857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 21872214 - 21872301
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||  ||||||| | ||||||||||| ||||||||||| ||||||||||| ||||||||| |  ||| | |||||||||||    
T  21872214 tgtttggattaacttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatg 21872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 22667548 - 22667498
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  22667548 gattggcttatttgagcttatctactgacataagcacttgtgagactgttt 22667498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 22724187 - 22724137
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  22724187 gattggcttatttgagcttatctactgacataagcacttgtgagactgttt 22724137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 44014717 - 44014801
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt-agaaaagcttattgaaacaacttatgac 339  Q
    ||||||||||||||||||| || ||||||||| |||||| ||||| ||||||||||| |||||| |||||  ||||| ||||||||    
T  44014717 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaa-cttatgaaaacagcttatgac 44014801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 1288762 - 1288810
Alignment:
Q  249 agagtttgtttggattggcttatttaagcttatctactggcataagcac 297  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  1288762 agagtttgtttggattgacttatttgagcttatcaactggcataagcac 1288810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 27795938 - 27795989
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgttta 312  Q
    |||| |||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  27795938 gattagcttatttgagcttatctactggcataagcacttgtgaaactgttta 27795989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 37273277 - 37273198
Alignment:
Q  263 ttggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| | ||||| || | |||||||||||  ||||||||||| | | ||||||| ||||||||||||||||||    
T  37273277 ttggcttatttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatg 37273198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 43115207 - 43115120
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||| |||| |||||| |||| ||||||| || ||||| ||||| ||||| ||||| ||| || |||| ||||||||||||||||||    
T  43115207 tgttttgatttgcttatataaggttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatg 43115120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 45541722 - 45541635
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||| ||||||| || ||| |||| ||||| | ||||||||||||| | |||||  ||||| |||||||||||    
T  45541722 tgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatg 45541635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 41057304 - 41057250
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||| |||||||||||| |||||||||||  |||||||||||| |||||||||||    
T  41057304 tttgaattggcttatttgagcttatctacatgcataagcacttgtgagactgttt 41057250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 24603677 - 24603765
Alignment:
Q  261 gattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    ||||| ||||||| || || |||||| |||||||||| | ||||||||||| | | | ||||||||||||  |||||||||||| ||||    
T  24603677 gattgccttatttgaggttttctactagcataagcacctctgagactgtttgggagaacttattgaaacagtttatgacatgcccataa 24603765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 36646300 - 36646388
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||| | ||||||||||| |||||| ||||||| |||||| | ||||| ||| | | ||||||| ||||| ||||||| ||||    
T  36646300 ttgtttggatcgacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatg 36646388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 311
Target Start/End: Complemental strand, 45590810 - 45590746
Alignment:
Q  247 ttagagtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||| ||||||||| |||| ||| ||| | |||||||||| |||||||||||| |||||||||||    
T  45590810 ttagggtttgtttgaattgacttttttgaacttatctactagcataagcacttgtgagactgttt 45590746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 20880627 - 20880588
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  20880627 tgtttggattggcttatttgagcttatctacttgcataag 20880588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 22232983 - 22232897
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| | ||||| ||||||||| |||| ||||||| || ||| ||||||| | | || |||| ||||||||||||||||||    
T  22232983 tgtttggattgacgtatttgagcttatctgctggaataagcatttgtgaaactgttttg-agagtttatagaaacaacttatgacatg 22232897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 24624357 - 24624274
Alignment:
Q  259 tggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||||| || | ||||||||||  ||| ||||||| | ||||||||| ||| |||||||  ||||| |||||||||||    
T  24624357 tggattggcttagttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatg 24624274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 25459549 - 25459616
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagctta 322  Q
    |||||||||||  |||||| |||||||| ||| |||||||||||| ||||| ||||| ||| ||||||    
T  25459549 tgtttggattgatttatttgagcttatcaactagcataagcacttgtgagattgtttggaagagctta 25459616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 349
Target Start/End: Complemental strand, 26542665 - 26542594
Alignment:
Q  278 ttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcctataa 349  Q
    |||||||||  |||||| |||| | ||||||||| ||| |||||| ||||||||||||||| ||| ||||||    
T  26542665 ttatctactcacataagtacttgtaagactgtttggaagagcttactgaaacaacttatgatatgtctataa 26542594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 290
Target Start/End: Complemental strand, 47132467 - 47132432
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggca 290  Q
    ||||||||||||||||||| ||||||||||||||||    
T  47132467 tgtttggattggcttatttgagcttatctactggca 47132432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 11253652 - 11253566
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    |||||| |||| ||||||| || ||||||||| ||||||||||||  |||||||||| | | |  ||||  ||||||||||||||||    
T  11253652 tgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttatgacat 11253566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 21574643 - 21574554
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt--ttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||| || ||||||| | |||||||||||||| || || ||  |||||||||||| | | |||||||  |||||||||||||||||    
T  21574643 tgtttggaatgacttatttgaacttatctactggcaaaatcaattgtttgagactgtttgggagagcttatgaaaacaacttatgacatg 21574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 24085258 - 24085296
Alignment:
Q  256 gtttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  24085258 gtttggattggcttatttgagcttatctaccggcataag 24085296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 24684738 - 24684780
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||||||||  ||||||| ||||||||||||||||||||    
T  24684738 gtttgtttggattaacttatttgagcttatctactggcataag 24684780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 26330255 - 26330329
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||| || ||||||||||  ||||| | || ||||||||||||||| |||||||  ||||||||| |||||||    
T  26330255 ttatttgaggttatctactgaaataagtatttgtgagactgtttagaagagcttatgaaaacaacttctgacatg 26330329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 30657437 - 30657371
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagctt 321  Q
    |||||| ||||  |||||| || |||||||||| ||||||||||||||||| ||||| ||| |||||    
T  30657437 tgtttgaattgatttatttgagtttatctactgacataagcacttttgagattgtttggaagagctt 30657371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 36189782 - 36189724
Alignment:
Q  253 tttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||| |||| ||||||| ||||||| |||| | |||||||||| |||||||||||    
T  36189782 tttgtttgaattgacttatttgagcttatttactagtataagcacttgtgagactgttt 36189724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 38971389 - 38971355
Alignment:
Q  275 agcttatctactggcataagcacttttgagactgt 309  Q
    ||||||||||||||||||||||||| |||||||||    
T  38971389 agcttatctactggcataagcacttgtgagactgt 38971355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 50016035 - 50015981
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||||| | || ||||||| |||||||| ||||| |||||||||||    
T  50016035 tttggattggcttatctcagtttatctattggcataaacacttgtgagactgttt 50015981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 50211888 - 50211830
Alignment:
Q  253 tttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||  ||||||| ||||||||||||  ||||||||||| | |||||||||    
T  50211888 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactgttt 50211830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 4359434 - 4359487
Alignment:
Q  258 ttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||||||| |||||||||| |||| |||||  | ||||||||||||    
T  4359434 ttggattggcttatttgagcttatctattggcgtaagccttgttgagactgttt 4359487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 43875626 - 43875533
Alignment:
Q  246 cttagagtttgtttggattggcttatttaagcttatctactgg-cataagcacttttgagactgtttagaaaagcttattgaaacaacttatga 338  Q
    ||||| ||||||||| |||| ||||||| || |||||||||||  |||||||||| ||||| ||| |   || |||||| ||||||||||||||    
T  43875626 cttagggtttgtttgaattgacttatttgagtttatctactggttataagcacttgtgagattgtctgagaatgcttatagaaacaacttatga 43875533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 3622412 - 3622368
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||| | |||||||||||||||||||| | ||||||||||    
T  3622412 tgtttggatcgacttatttaagcttatctactagtataagcactt 3622368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 20210847 - 20210903
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||||||||||  |||||| || |||||||||| ||||| ||||| |||||||||||    
T  20210847 tgtttggattgatttatttgaggttatctactgacataaccacttgtgagactgttt 20210903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 20685730 - 20685682
Alignment:
Q  251 agtttgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||| ||| ||||||| || ||||||| ||||||||||||||    
T  20685730 agtttgtttggcttgacttatttgagtttatctattggcataagcactt 20685682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 31710819 - 31710895
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcc 344  Q
    |||||| | ||||||||| | |||||| |||| |||| ||||||   |||||||||  |||||||||||||||||||    
T  31710819 ttatttgaacttatctaccgacataagaacttgtgagtctgtttgtgaaagcttataaaaacaacttatgacatgcc 31710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 31711074 - 31711150
Alignment:
Q  268 ttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatgcc 344  Q
    |||||| | ||||||||| | |||||| |||| |||| ||||||   |||||||||  |||||||||||||||||||    
T  31711074 ttatttgaacttatctaccgacataagaacttgtgagtctgtttgtgaaagcttataaaaacaacttatgacatgcc 31711150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 36832206 - 36832246
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||| |||||||||||||||| ||||||| ||||||    
T  36832206 ttgtttggactggcttatttaagcttttctactgacataag 36832246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 49845459 - 49845543
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgac 339  Q
    ||||||||||| ||||||| ||||||| |||| | ||||  |||| ||| ||| ||| | | ||||||| |||||||||||||||    
T  49845459 tgtttggattgacttatttgagcttatatactagtataaaaacttatgaaactatttgggagagcttatggaaacaacttatgac 49845543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 340
Target Start/End: Complemental strand, 25609940 - 25609862
Alignment:
Q  262 attggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    |||||||||||| ||||||||||||  |||||| |||| |||||||| || ||| ||||||| ||||||||||||||||    
T  25609940 attggcttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatgaca 25609862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 340
Target Start/End: Complemental strand, 22878249 - 22878164
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    ||||||||||| ||||||| |||||||| |||| ||||||||||| ||||||||||| | | | ||||| ||||||| ||||||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattatgaca 22878164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 15370242 - 15370298
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||| |||||||||||||||||||||| || |||||||||||    
T  15370242 tgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgttt 15370298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 342
Target Start/End: Original strand, 30552561 - 30552649
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||| ||||| | ||||| |||||||||||||| |||||||||||||| |||||||   | || |||| ||||||||||||||||||    
T  30552561 ttgtttagattgacatatttgagcttatctactggtataagcacttttgaaactgtttgagataggttatcgaaacaacttatgacatg 30552649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 40944064 - 40943977
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||| |||||||| || ||||||| || ||||||||||| ||| ||||||| |||||| ||||  ||||| |||||||||||    
T  40944064 tgtttggattagcttatttgagtttatctaatgacataagcacttgtgaaactgtttggaaaagtttatgaaaacagcttatgacatg 40943977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 9996889 - 9996803
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||| ||| ||||||| |||||||| ||| ||||||| |||| |||||||| || | | ||||||| |||||||||||||||||    
T  9996889 tgtttggcttgacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacat 9996803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 28803451 - 28803536
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgttt-agaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||| ||||||| ||||||||||| ||||||||||| | ||||||||||| ||| || | ||| ||||||||||||||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaa-catatggaaacaacttatgacatg 28803536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 11514048 - 11513991
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||| |||||| || ||||||||| |||||||||||| |||||||||||    
T  11514048 ttgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttt 11513991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 750885 - 750829
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| ||||||| |||||||||| ||| |||||||||||||||| |||||    
T  750885 tgtttggattgacttatttgagcttatctattggtataagcacttttgagaatgttt 750829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 4350849 - 4350797
Alignment:
Q  247 ttagagtttgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    |||| |||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  4350849 ttagggtttgtttggattggcttatttgagcttctctactgacataagcactt 4350797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 6548040 - 6547984
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||| |||||| ||||||||||||| ||||||| |||| |||||||||||    
T  6548040 tgtttggattgacttattcaagcttatctactagcataagaacttgtgagactgttt 6547984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 15120334 - 15120247
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||| ||||||| | |||||||||| |||||| || || |||  |||||| | | ||||||| ||||||||||||||||||    
T  15120334 tgtttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatg 15120247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 42852618 - 42852677
Alignment:
Q  252 gtttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||| |||||||| |||||||| | ||||||| ||||||||||||||| |||||||||||    
T  42852618 gtttatttggatttgcttatttgaacttatctgctggcataagcacttgtgagactgttt 42852677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 13867029 - 13866936
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt-agaaaagcttattgaaacaacttatgacatgcctata 348  Q
    ||||||||||| | ||||| ||||||||||||| ||||| ||||| ||||||||||| ||| || ||||   ||||||| |||||||||||||||    
T  13867029 tgtttggattgacctatttgagcttatctactgccataaacacttgtgagactgtttgagagaa-cttaagaaaacaacctatgacatgcctata 13866936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 38767501 - 38767555
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgt 309  Q
    ||||| |||||||||||   ||||||||||||||||||||||||| |||||||||    
T  38767501 tgtttagattggcttatacgagcttatctactggcataagcacttgtgagactgt 38767555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 787484 - 787427
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||||||| |||||  ||| ||||||||||||||||||||| ||| |||||||    
T  787484 ttgtttggattggattattcgagcatatctactggcataagcacttgtgacactgttt 787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 43259987 - 43259942
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    |||||||||||||||||||| | |||||||||| ||||||||||||    
T  43259987 ttgtttggattggcttatttgaacttatctactagcataagcactt 43259942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 10286011 - 10285967
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||    
T  10286011 tgtttggattgtcttatttaagcttatctatttgcataagcactt 10285967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 287
Target Start/End: Original strand, 37434452 - 37434484
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactg 287  Q
    |||||||||||||||||||||||||||||||||    
T  37434452 tgtttggattggcttatttaagcttatctactg 37434484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 40759311 - 40759259
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    ||||||||||| ||||||| |||||||||| || ||||||||||| |||||||    
T  40759311 tgtttggattgccttatttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 342
Target Start/End: Complemental strand, 43811262 - 43811174
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||||  |||||||| |||||||||| ||  |||||||| ||| |||||||   ||| ||||| ||||||||||||| ||||    
T  43811262 ttgtttggattgatttatttaatcttatctactagctcaagcacttgtgatactgtttgagaaaccttatggaaacaacttatggcatg 43811174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 9878621 - 9878688
Alignment:
Q  275 agcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||| |||| || ||||||||| |||||||||   ||| ||||||| ||||||||||||||||||    
T  9878621 agcttatttactagcttaagcacttctgagactgtagggaagagcttatggaaacaacttatgacatg 9878688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 341
Target Start/End: Original strand, 16551758 - 16551845
Alignment:
Q  255 tgtttggattggcttattt-aagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    ||||||||||| ||| ||| ||||||||||| || ||||| |||||  |||| ||||||||| ||||||| |||| | ||||||||||    
T  16551758 tgtttggattgacttgttttaagcttatctattgacataaacacttgcgagattgtttagaagagcttatggaaagatcttatgacat 16551845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 29936179 - 29936124
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtt 310  Q
    ||||||||||||||||||| |||| |||| ||||||||||||| | |||| |||||    
T  29936179 tgtttggattggcttatttgagctcatcttctggcataagcacctctgagtctgtt 29936124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 298
Target Start/End: Original strand, 30990358 - 30990401
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcact 298  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||    
T  30990358 tgtttggattggcttatttgagcttatctactaacataagcact 30990401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 33942057 - 33942018
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  33942057 tgtttggattggcttatttgaggttatctactggcataag 33942018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 40158867 - 40158816
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactg 308  Q
    ||||||||||||||||| ||| ||||||||| |||||| |||| ||||||||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactg 40158816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 40837355 - 40837394
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataa 293  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  40837355 ttgtttggattggcttatttgagcttatctactgacataa 40837394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Original strand, 41809164 - 41809251
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    |||||||||||| || || |||||||| |  |||||||| ||||| |||||||| ||  || ||||| | ||||||||||||||||||    
T  41809164 tgtttggattggttttttaaagcttatttgttggcataaacacttgtgagactgattgtaagagcttgtggaaacaacttatgacatg 41809251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 6561488 - 6561402
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacat 341  Q
    |||||| |||| ||||||| || |||||||| ||||||| | ||| || ||| ||| | || ||||||| |||||||||||||||||    
T  6561488 tgtttgaattgacttatttgagtttatctacgggcataaacgcttctgtgaccgttcaaaagagcttatggaaacaacttatgacat 6561402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 18179161 - 18179203
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcactt 299  Q
    |||||||||||||||||||||||||||| |  |||||||||||    
T  18179161 tttggattggcttatttaagcttatctagttacataagcactt 18179203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 28810371 - 28810433
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaa 317  Q
    ||||||||||| ||||||| ||||| |||| |||||||| ||||| |||| |||||| |||||    
T  28810371 tgtttggattgacttatttgagcttctctattggcataaacacttgtgaggctgtttggaaaa 28810433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 40400819 - 40400857
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataa 293  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  40400819 tgtttggattggcttatttaagcctatctactgacataa 40400857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 287
Target Start/End: Complemental strand, 3312229 - 3312196
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactg 287  Q
    |||||||||||||||||||| |||||||||||||    
T  3312229 ttgtttggattggcttatttgagcttatctactg 3312196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 14277824 - 14277897
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgaca 340  Q
    ||||||| || |||||||| | |||||| |||| ||||| ||||| ||| |||| || ||||||||||||||||    
T  14277824 cttatttgagtttatctacggacataagtacttgtgagagtgtttggaagagctcatggaaacaacttatgaca 14277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 27317021 - 27317066
Alignment:
Q  250 gagtttgtttggattggcttatttaagcttatctactggcataagc 295  Q
    |||| ||||||||||| ||||||| |||||||||| ||||||||||    
T  27317021 gagtctgtttggattgacttattttagcttatctattggcataagc 27317066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 28933972 - 28933887
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||||||||||||  |||||||||| || ||||| || || | || |||||| ||| |||||||  |||||||||||| ||||    
T  28933972 tttggattggcttattagagcttatctagtgccataaacatttataagtctgtttggaagagcttatgaaaacaacttatggcatg 28933887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 33319737 - 33319774
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataag 294  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  33319737 tttggattggcttatttgagcttgtctactggcataag 33319774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 33503149 - 33503108
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagca 296  Q
    |||||| |||||||||||| |||||||||||| |||||||||    
T  33503149 tgtttgtattggcttatttgagcttatctactagcataagca 33503108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 43985358 - 43985273
Alignment:
Q  257 tttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgacatg 342  Q
    ||||||| | |||||||||| |||||||||| ||||| ||||| | | |||||||   | || ||| |||||||||||||||||||    
T  43985358 tttggatcgacttatttaagtttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatg 43985273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 3973693 - 3973609
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgac 339  Q
    ||||||||||  ||||||| |||||||| ||||  |||||||||| | |||||||||   | ||| ||| |||||||||||||||    
T  3973693 tgtttggattcacttatttgagcttatccactgatataagcacttataagactgtttgagagagcatatggaaacaacttatgac 3973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 30331903 - 30331863
Alignment:
Q  254 ttgtttggattggcttatttaagcttatctactggcataag 294  Q
    |||||||||||| ||||||| ||||||||||||| ||||||    
T  30331903 ttgtttggattgacttatttcagcttatctactgacataag 30331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 339
Target Start/End: Original strand, 34728287 - 34728358
Alignment:
Q  267 cttatttaagcttatctactggcataagcacttttgagactgtttagaaaagcttattgaaacaacttatgac 339  Q
    ||||||| |||||||||||||||||||||| || ||  |||| || ||| |||||| | ||||||||||||||    
T  34728287 cttattttagcttatctactggcataagcatttgtggaactggttggaatagctta-taaaacaacttatgac 34728358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 35378451 - 35378495
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcactt 299  Q
    ||||||||||||||||||| ||||||| || | ||||||||||||    
T  35378451 tgtttggattggcttatttgagcttatataatagcataagcactt 35378495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 37276895 - 37276839
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    ||||||||| | |||||||||| |||||||||   |||||||||| |||||||||||    
T  37276895 tgtttggatcgacttatttaagtttatctactaatataagcacttgtgagactgttt 37276839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 41170761 - 41170709
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagact 307  Q
    ||||||||||||||||||| || |||||||||  ||||| ||||| |||||||    
T  41170761 tgtttggattggcttatttgagtttatctactaacataaacacttgtgagact 41170709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Complemental strand, 6083 - 6027
Alignment:
Q  255 tgtttggattggcttatttaagcttatctactggcataagcacttttgagactgttt 311  Q
    |||| ||||| | |||||| | |||||||||| |||||||||||| |||||||||||    
T  6083 tgttaggatttgtttatttgatcttatctacttgcataagcacttatgagactgttt 6027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University