View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11089_high_57 (Length: 235)
Name: NF11089_high_57
Description: NF11089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11089_high_57 |
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Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 15116905 - 15117105
Alignment:
| Q |
17 |
cacagaagtcacattcagatgataagattttgagttcaagatagtgtgtaagaatgtgaagtacttggtgtgaaggtatctgcatcactgcatgctaaag |
116 |
Q |
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| T |
15116905 |
cacagaagtcacactcagatgataagattttgagttcaaggtagtgtgtaagaatgtgaagtacttagtgtgaaggtatctgcatcactgcattctaaag |
15117004 |
T |
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| Q |
117 |
ctatgtatggtacatatgatgagtattcaaagcacgcacgtttctctttggaaaaataattgaagttgttacattattcaaacttattgacatgaatatt |
216 |
Q |
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| T |
15117005 |
ctatgtatggtacatatgatgagtattcaaagcacgcacgtttctctttggaaaaataattgaagttgttacattattcaaacttattgacatgaatatt |
15117104 |
T |
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| Q |
217 |
c |
217 |
Q |
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| T |
15117105 |
c |
15117105 |
T |
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