View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11090_high_13 (Length: 443)

Name: NF11090_high_13
Description: NF11090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11090_high_13
NF11090_high_13
[»] scaffold0838 (2 HSPs)
scaffold0838 (1-424)||(2390-2813)
scaffold0838 (356-425)||(3572-3641)
[»] scaffold0832 (2 HSPs)
scaffold0832 (1-424)||(2421-2844)
scaffold0832 (356-425)||(3603-3672)
[»] chr3 (42 HSPs)
chr3 (1-148)||(12805820-12805969)
chr3 (1-159)||(16245649-16245808)
chr3 (1-152)||(21303280-21303433)
chr3 (1-152)||(21325360-21325514)
chr3 (1-80)||(21301938-21302017)
chr3 (3-152)||(41508389-41508540)
chr3 (1-91)||(3116408-3116497)
chr3 (1-151)||(20429730-20429882)
chr3 (1-78)||(4650251-4650328)
chr3 (1-159)||(2167536-2167696)
chr3 (1-128)||(8319059-8319186)
chr3 (5-79)||(8557130-8557204)
chr3 (2-80)||(19925623-19925701)
chr3 (3-80)||(8889152-8889229)
chr3 (3-72)||(28728966-28729035)
chr3 (1-45)||(821549-821593)
chr3 (1-65)||(12411171-12411235)
chr3 (1-80)||(10744922-10745001)
chr3 (1-80)||(17438431-17438510)
chr3 (1-39)||(12759407-12759445)
chr3 (1-46)||(10917938-10917983)
chr3 (1-45)||(6289923-6289967)
chr3 (3-39)||(18458465-18458501)
chr3 (1-65)||(22349429-22349493)
chr3 (2-45)||(13908261-13908304)
chr3 (3-46)||(16229976-16230019)
chr3 (1-80)||(19171834-19171913)
chr3 (4-65)||(932765-932826)
chr3 (69-165)||(2723747-2723846)
chr3 (1-46)||(8765137-8765182)
chr3 (1-46)||(8770039-8770084)
chr3 (69-165)||(17155880-17155978)
chr3 (2-80)||(5508357-5508434)
chr3 (1-79)||(10923167-10923245)
chr3 (5-79)||(21825870-21825943)
chr3 (1-79)||(31286017-31286093)
chr3 (3-40)||(11518001-11518038)
chr3 (1-38)||(11533017-11533054)
chr3 (20-65)||(19909975-19910020)
chr3 (1-46)||(21019630-21019674)
chr3 (1-65)||(19908327-19908391)
chr3 (3-39)||(52517834-52517869)
[»] chr7 (71 HSPs)
chr7 (1-159)||(3734616-3734776)
chr7 (1-152)||(7318293-7318446)
chr7 (1-159)||(17153073-17153233)
chr7 (1-121)||(4785856-4785976)
chr7 (1-121)||(4818856-4818976)
chr7 (1-150)||(9574427-9574578)
chr7 (1-152)||(8313318-8313474)
chr7 (3-128)||(6013615-6013740)
chr7 (4-80)||(11803103-11803179)
chr7 (1-145)||(10586957-10587103)
chr7 (1-204)||(15869615-15869820)
chr7 (1-80)||(1848227-1848306)
chr7 (1-80)||(3329658-3329737)
chr7 (5-159)||(7492182-7492338)
chr7 (1-79)||(9864327-9864405)
chr7 (1-81)||(8979005-8979085)
chr7 (4-80)||(9731627-9731703)
chr7 (1-65)||(18368995-18369059)
chr7 (5-165)||(3190973-3191134)
chr7 (1-128)||(4986575-4986702)
chr7 (1-128)||(4990673-4990800)
chr7 (1-80)||(13759860-13759939)
chr7 (1-91)||(1584564-1584653)
chr7 (1-79)||(2563838-2563915)
chr7 (1-121)||(16365725-16365844)
chr7 (1-79)||(18662461-18662539)
chr7 (55-128)||(1584306-1584379)
chr7 (1-82)||(31492950-31493031)
chr7 (1-65)||(5108586-5108649)
chr7 (1-65)||(8054504-8054568)
chr7 (4-80)||(11221164-11221240)
chr7 (4-121)||(12181631-12181748)
chr7 (1-80)||(13418553-13418633)
chr7 (1-65)||(16297835-16297899)
chr7 (3-79)||(16306716-16306792)
chr7 (1-65)||(23099967-23100031)
chr7 (218-322)||(37519067-37519171)
chr7 (4-152)||(1587704-1587855)
chr7 (1-79)||(18449262-18449340)
chr7 (1-46)||(8877441-8877486)
chr7 (1-46)||(10937622-10937667)
chr7 (3-80)||(13277525-13277602)
chr7 (4-80)||(17203047-17203122)
chr7 (4-80)||(39273175-39273251)
chr7 (3-65)||(16059036-16059099)
chr7 (3-65)||(4449002-4449064)
chr7 (1-79)||(5530041-5530119)
chr7 (1-39)||(5797531-5797569)
chr7 (1-39)||(8054099-8054137)
chr7 (1-46)||(9916586-9916631)
chr7 (1-46)||(9924498-9924543)
chr7 (4-65)||(18467474-18467535)
chr7 (3-79)||(10584487-10584563)
chr7 (7-79)||(18466031-18466103)
chr7 (1-80)||(2350747-2350826)
chr7 (12-79)||(4579128-4579195)
chr7 (1-80)||(6042481-6042559)
chr7 (1-80)||(10648598-10648677)
chr7 (4-35)||(21227202-21227233)
chr7 (1-79)||(9245201-9245279)
chr7 (1-79)||(9500464-9500542)
chr7 (7-65)||(17077154-17077212)
chr7 (1-65)||(20582279-20582340)
chr7 (1-39)||(21102334-21102372)
chr7 (1-46)||(7397216-7397260)
chr7 (126-159)||(14195891-14195924)
chr7 (8-45)||(18661617-18661654)
chr7 (10-79)||(22339312-22339381)
chr7 (1-53)||(9261224-9261276)
chr7 (98-159)||(17829686-17829749)
chr7 (1-45)||(21230332-21230376)
[»] chr4 (44 HSPs)
chr4 (1-159)||(12578185-12578345)
chr4 (3-142)||(11490554-11490694)
chr4 (1-152)||(17672022-17672175)
chr4 (3-128)||(22175915-22176039)
chr4 (1-152)||(14648915-14649067)
chr4 (1-165)||(5679225-5679391)
chr4 (5-151)||(17337063-17337210)
chr4 (1-152)||(17951222-17951375)
chr4 (1-152)||(17955074-17955227)
chr4 (1-80)||(13908874-13908953)
chr4 (3-159)||(19092317-19092475)
chr4 (1-80)||(15164787-15164866)
chr4 (1-80)||(19492700-19492779)
chr4 (4-121)||(19636546-19636662)
chr4 (3-79)||(19882662-19882738)
chr4 (1-80)||(13128874-13128953)
chr4 (1-80)||(13692669-13692748)
chr4 (1-145)||(19929608-19929754)
chr4 (1-79)||(20315020-20315098)
chr4 (1-81)||(7582317-7582397)
chr4 (1-65)||(17216837-17216901)
chr4 (1-65)||(24639469-24639533)
chr4 (1-80)||(21323875-21323954)
chr4 (1-79)||(25121227-25121304)
chr4 (1-82)||(13992874-13992955)
chr4 (1-46)||(17709777-17709822)
chr4 (4-207)||(8969600-8969797)
chr4 (1-65)||(19562193-19562257)
chr4 (7-61)||(11521210-11521264)
chr4 (1-87)||(11933439-11933524)
chr4 (1-79)||(12839781-12839859)
chr4 (11-80)||(16730399-16730468)
chr4 (1-45)||(15047148-15047192)
chr4 (1-45)||(15107232-15107276)
chr4 (1-128)||(22357484-22357614)
chr4 (7-39)||(22526390-22526422)
chr4 (1-118)||(40227796-40227911)
chr4 (1-39)||(11700610-11700648)
chr4 (1-79)||(23080361-23080439)
chr4 (3-53)||(25643485-25643534)
chr4 (1-46)||(10589732-10589776)
chr4 (1-72)||(9737512-9737588)
chr4 (1-29)||(12318453-12318481)
chr4 (3-46)||(25097856-25097900)
[»] chr6 (44 HSPs)
chr6 (1-210)||(15466390-15466600)
chr6 (5-152)||(9838380-9838529)
chr6 (1-207)||(12183201-12183410)
chr6 (7-152)||(28933586-28933733)
chr6 (1-152)||(23645693-23645846)
chr6 (1-145)||(22567860-22568005)
chr6 (5-159)||(11176974-11177130)
chr6 (1-152)||(21907452-21907607)
chr6 (4-164)||(8241300-8241460)
chr6 (1-79)||(9726042-9726120)
chr6 (4-122)||(21688753-21688871)
chr6 (7-159)||(4339761-4339915)
chr6 (4-80)||(17827092-17827168)
chr6 (5-80)||(9516809-9516884)
chr6 (1-80)||(22410327-22410406)
chr6 (1-91)||(21672424-21672514)
chr6 (1-65)||(23143742-23143806)
chr6 (1-72)||(17729172-17729243)
chr6 (4-91)||(21679840-21679927)
chr6 (1-80)||(27737689-27737768)
chr6 (1-79)||(17299832-17299910)
chr6 (3-60)||(23009414-23009471)
chr6 (3-60)||(23778893-23778950)
chr6 (1-80)||(23844465-23844544)
chr6 (1-78)||(25927305-25927382)
chr6 (1-53)||(34478545-34478596)
chr6 (1-64)||(18075404-18075467)
chr6 (1-80)||(23231983-23232062)
chr6 (3-46)||(24657489-24657532)
chr6 (1-63)||(19244605-19244667)
chr6 (1-39)||(22566203-22566241)
chr6 (1-128)||(8039088-8039210)
chr6 (265-344)||(8338188-8338267)
chr6 (1-45)||(20005914-20005958)
chr6 (1-32)||(21932100-21932131)
chr6 (3-46)||(22413083-22413126)
chr6 (1-35)||(7543005-7543039)
chr6 (8-46)||(17382172-17382210)
chr6 (1-30)||(5624660-5624689)
chr6 (1-34)||(20145106-20145139)
chr6 (1-34)||(22187700-22187733)
chr6 (1-128)||(6630644-6630769)
chr6 (1-33)||(14079491-14079523)
chr6 (268-344)||(24123052-24123128)
[»] chr1 (48 HSPs)
chr1 (1-152)||(24281297-24281450)
chr1 (3-151)||(147653-147801)
chr1 (1-116)||(22664226-22664341)
chr1 (1-80)||(21666608-21666687)
chr1 (1-121)||(13345296-13345415)
chr1 (3-152)||(33190699-33190850)
chr1 (1-80)||(12208621-12208700)
chr1 (1-80)||(17610256-17610335)
chr1 (1-79)||(24306307-24306384)
chr1 (3-80)||(18736240-18736317)
chr1 (3-80)||(21334719-21334796)
chr1 (3-72)||(29242541-29242610)
chr1 (1-65)||(21449109-21449173)
chr1 (1-80)||(15543966-15544045)
chr1 (1-80)||(21987982-21988061)
chr1 (1-80)||(25405630-25405709)
chr1 (1-79)||(17837537-17837615)
chr1 (3-159)||(9787798-9787956)
chr1 (1-80)||(14779585-14779664)
chr1 (1-128)||(24214564-24214691)
chr1 (6-155)||(51473799-51473950)
chr1 (3-80)||(16916933-16917011)
chr1 (3-80)||(16787726-16787803)
chr1 (74-152)||(18100939-18101019)
chr1 (3-79)||(3591654-3591730)
chr1 (1-72)||(22622910-22622981)
chr1 (1-80)||(23038012-23038090)
chr1 (3-45)||(727489-727531)
chr1 (18-80)||(9401542-9401604)
chr1 (1-39)||(18825675-18825713)
chr1 (1-78)||(27117720-27117797)
chr1 (1-65)||(18830501-18830565)
chr1 (1-65)||(21847654-21847717)
chr1 (4-80)||(22620285-22620361)
chr1 (1-45)||(26540916-26540959)
chr1 (60-128)||(28008184-28008252)
chr1 (1-80)||(17359182-17359261)
chr1 (3-46)||(24054001-24054043)
chr1 (1-60)||(44795389-44795447)
chr1 (3-37)||(16179029-16179063)
chr1 (3-80)||(23179819-23179897)
chr1 (6-91)||(15813144-15813228)
chr1 (8-80)||(15813524-15813597)
chr1 (1-46)||(16069585-16069630)
chr1 (3-39)||(12012841-12012877)
chr1 (3-39)||(14781894-14781930)
chr1 (265-313)||(23348077-23348125)
chr1 (265-313)||(23353337-23353385)
[»] chr2 (37 HSPs)
chr2 (1-152)||(32085483-32085636)
chr2 (1-159)||(20174554-20174714)
chr2 (1-151)||(25618576-25618727)
chr2 (1-80)||(30411698-30411777)
chr2 (1-81)||(15339258-15339338)
chr2 (1-80)||(17743476-17743555)
chr2 (1-80)||(25196030-25196109)
chr2 (1-80)||(29719231-29719310)
chr2 (1-151)||(45621809-45621960)
chr2 (3-65)||(25535296-25535358)
chr2 (7-152)||(11382679-11382826)
chr2 (3-46)||(25530469-25530512)
chr2 (12-117)||(25885423-25885528)
chr2 (4-81)||(27418389-27418466)
chr2 (19-128)||(28606130-28606239)
chr2 (1-81)||(17349377-17349456)
chr2 (1-128)||(23011714-23011841)
chr2 (1-72)||(8503078-8503149)
chr2 (1-80)||(27909119-27909198)
chr2 (3-65)||(24090941-24091003)
chr2 (1-80)||(25888224-25888299)
chr2 (3-80)||(12953294-12953371)
chr2 (1-65)||(28770458-28770522)
chr2 (1-150)||(29027516-29027667)
chr2 (1-64)||(31804916-31804979)
chr2 (1-80)||(9774335-9774412)
chr2 (7-63)||(13776365-13776420)
chr2 (1-65)||(28925541-28925605)
chr2 (3-79)||(45553152-45553228)
chr2 (3-45)||(26667339-26667382)
chr2 (1-63)||(19200152-19200213)
chr2 (18-80)||(25920303-25920365)
chr2 (1-46)||(8447084-8447128)
chr2 (3-80)||(26603350-26603427)
chr2 (3-80)||(29142983-29143060)
chr2 (268-344)||(13312284-13312359)
chr2 (268-312)||(28699678-28699722)
[»] chr5 (34 HSPs)
chr5 (1-152)||(22755541-22755695)
chr5 (1-164)||(19283769-19283934)
chr5 (4-165)||(18208162-18208324)
chr5 (1-142)||(24266890-24267033)
chr5 (1-142)||(24343521-24343664)
chr5 (1-145)||(34487658-34487804)
chr5 (1-65)||(25550519-25550583)
chr5 (2-121)||(25402297-25402415)
chr5 (1-80)||(19004226-19004305)
chr5 (1-72)||(24140462-24140533)
chr5 (1-80)||(24245544-24245623)
chr5 (3-80)||(17171553-17171630)
chr5 (4-152)||(18937771-18937920)
chr5 (1-65)||(23388853-23388917)
chr5 (1-80)||(20315430-20315509)
chr5 (3-65)||(17315115-17315177)
chr5 (1-65)||(17185483-17185547)
chr5 (1-65)||(34128656-34128720)
chr5 (1-80)||(15375882-15375961)
chr5 (1-80)||(39434482-39434561)
chr5 (1-63)||(17431903-17431965)
chr5 (7-121)||(15690803-15690916)
chr5 (1-79)||(24852173-24852251)
chr5 (3-80)||(28664796-28664873)
chr5 (1-65)||(15469956-15470020)
chr5 (18-65)||(20549719-20549766)
chr5 (3-38)||(20858707-20858742)
chr5 (1-64)||(24167600-24167663)
chr5 (1-39)||(19086220-19086258)
chr5 (1-51)||(26502139-26502188)
chr5 (268-305)||(37551390-37551427)
chr5 (3-46)||(20564114-20564158)
chr5 (3-79)||(23265176-23265252)
chr5 (1-45)||(28253301-28253344)
[»] scaffold0062 (1 HSPs)
scaffold0062 (3-159)||(43146-43304)
[»] chr8 (32 HSPs)
chr8 (1-159)||(25182347-25182507)
chr8 (4-128)||(30806444-30806573)
chr8 (1-152)||(14528169-14528322)
chr8 (1-80)||(29382361-29382440)
chr8 (19-165)||(13697893-13698041)
chr8 (1-142)||(34497135-34497279)
chr8 (1-152)||(19786751-19786904)
chr8 (1-64)||(17101909-17101972)
chr8 (1-80)||(24114282-24114361)
chr8 (1-65)||(24269618-24269681)
chr8 (1-80)||(13314992-13315071)
chr8 (3-80)||(2637620-2637697)
chr8 (1-65)||(17509266-17509330)
chr8 (1-64)||(5850961-5851024)
chr8 (1-79)||(14075614-14075692)
chr8 (4-62)||(27659468-27659526)
chr8 (1-39)||(30783782-30783820)
chr8 (2-79)||(30122156-30122232)
chr8 (3-39)||(17976641-17976677)
chr8 (1-45)||(21314643-21314687)
chr8 (1-65)||(24904653-24904717)
chr8 (1-39)||(24110696-24110734)
chr8 (1-39)||(24723482-24723520)
chr8 (1-51)||(26008043-26008093)
chr8 (1-78)||(15238819-15238896)
chr8 (3-72)||(25226158-25226227)
chr8 (1-78)||(31288378-31288454)
chr8 (5-80)||(6884982-6885056)
chr8 (1-79)||(24644858-24644935)
chr8 (4-46)||(44011058-44011099)
chr8 (3-51)||(17972193-17972240)
chr8 (1-37)||(26615285-26615321)
[»] scaffold0622 (1 HSPs)
scaffold0622 (1-164)||(748-914)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-152)||(168225-168377)
[»] scaffold0427 (1 HSPs)
scaffold0427 (17-128)||(2769-2881)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-159)||(39604-39765)
[»] scaffold0008 (3 HSPs)
scaffold0008 (1-159)||(54880-55041)
scaffold0008 (2-65)||(234362-234425)
scaffold0008 (1-35)||(48235-48269)
[»] scaffold1869 (1 HSPs)
scaffold1869 (4-65)||(404-465)
[»] scaffold0155 (1 HSPs)
scaffold0155 (4-121)||(35954-36071)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-65)||(3551-3615)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-151)||(69101-69251)
[»] scaffold0102 (1 HSPs)
scaffold0102 (3-121)||(35559-35677)
[»] scaffold0056 (2 HSPs)
scaffold0056 (4-65)||(21299-21360)
scaffold0056 (4-80)||(25009-25085)
[»] scaffold0638 (1 HSPs)
scaffold0638 (1-64)||(839-902)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-80)||(69933-70012)
[»] scaffold0672 (1 HSPs)
scaffold0672 (1-46)||(1754-1799)
[»] scaffold0957 (1 HSPs)
scaffold0957 (1-65)||(3173-3236)
[»] scaffold0650 (1 HSPs)
scaffold0650 (4-79)||(6310-6385)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-46)||(15499-15544)
[»] scaffold0002 (1 HSPs)
scaffold0002 (84-144)||(114591-114653)
[»] scaffold0653 (1 HSPs)
scaffold0653 (1-79)||(4484-4562)
[»] scaffold0474 (1 HSPs)
scaffold0474 (268-344)||(7095-7171)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-34)||(72092-72125)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-103)||(29927-30027)
[»] scaffold0034 (1 HSPs)
scaffold0034 (3-46)||(76439-76483)
[»] scaffold0019 (1 HSPs)
scaffold0019 (7-79)||(11266-11338)


Alignment Details
Target: scaffold0838 (Bit Score: 343; Significance: 0; HSPs: 2)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 424
Target Start/End: Original strand, 2390 - 2813
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2390 accaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttgatttgacaatttaaaataa 2489  T
Q  101 aagagtgaagggttagagattgtaatttatctgtttgcaacagagaaagttatctgtttcgttgcnnnnnnngtaaacaacggttaggactcttcgaatc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||        ||||||| ||||||||||||||| ||||    
T  2490 aagagtgaagggttagagattgtaatttatctgtttgcaacagagaaagttacctgtttcgttgtagaaaaagtaaacagcggttaggactcttcaaatc 2589  T
Q  201 cccctatcttctgattgagggtccaagttgtttgacgcctatatcacggaaatacaactccaaaaaaggctataaataccacttttgagatcattcttac 300  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  2590 cccctatcttctggttgagggtccaagttgtttgacgcctatgtcacggaaatacaactccaaaaaaggctataaataccccttttaagatcattctcac 2689  T
Q  301 ggcatgacaaaaatagtactaaccctaatttctaatattgtactttcaacaagtatacccatatcatttattcccaaacaaaataaaacaactcataatt 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2690 ggcatgacaaaaatagtactaaccctaatttctaatattgtactttctgcaagtatacccatatcatttattcccaaacaaaataaaacaactcataatt 2789  T
Q  401 tatttattttaggaaaacacaaat 424  Q
    ||||||||||||||||||||||||    
T  2790 tatttattttaggaaaacacaaat 2813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 3641 - 3572
Alignment:
Q  356 tacccatatcatttattcccaaacaaaataaaacaactcataatttatttattttaggaaaacacaaatc 425  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||| |||||||    
T  3641 tacccatatcatttattcccacataaaataagacaactcataatttatttattttaggaaaagacaaatc 3572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 343; Significance: 0; HSPs: 2)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 424
Target Start/End: Original strand, 2421 - 2844
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2421 accaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttgatttgacaatttaaaataa 2520  T
Q  101 aagagtgaagggttagagattgtaatttatctgtttgcaacagagaaagttatctgtttcgttgcnnnnnnngtaaacaacggttaggactcttcgaatc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||        ||||||| ||||||||||||||| ||||    
T  2521 aagagtgaagggttagagattgtaatttatctgtttgcaacagagaaagttacctgtttcgttgtagaaaaagtaaacagcggttaggactcttcaaatc 2620  T
Q  201 cccctatcttctgattgagggtccaagttgtttgacgcctatatcacggaaatacaactccaaaaaaggctataaataccacttttgagatcattcttac 300  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||    
T  2621 cccctatcttctggttgagggtccaagttgtttgacgcctatgtcacggaaatacaactccaaaaaaggctataaataccccttttaagatcattctcac 2720  T
Q  301 ggcatgacaaaaatagtactaaccctaatttctaatattgtactttcaacaagtatacccatatcatttattcccaaacaaaataaaacaactcataatt 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2721 ggcatgacaaaaatagtactaaccctaatttctaatattgtactttctgcaagtatacccatatcatttattcccaaacaaaataaaacaactcataatt 2820  T
Q  401 tatttattttaggaaaacacaaat 424  Q
    ||||||||||||||||||||||||    
T  2821 tatttattttaggaaaacacaaat 2844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 356 - 425
Target Start/End: Complemental strand, 3672 - 3603
Alignment:
Q  356 tacccatatcatttattcccaaacaaaataaaacaactcataatttatttattttaggaaaacacaaatc 425  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||| |||||||    
T  3672 tacccatatcatttattcccacataaaataagacaactcataatttatttattttaggaaaagacaaatc 3603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 9e-37; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12805969 - 12805820
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| |||||| ||||||| | | |||| | ||||||||    
T  12805969 accaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgttacttattttaagtcgacgttataaaataa 12805870  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaa 148  Q
    |||| | ||||||||||||||| ||  |||||||||||||||||||||||    
T  12805869 aagattaaagggttagagattgcaatttttatctgtttgcaacagagaaa 12805820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 16245808 - 16245649
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||  |||||| |||||||||||  ||||| |||||||  |||||| |  ||||||||    
T  16245808 accaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaattctcgttacttattttagtttgacaa--taaaataa 16245711  T
Q  101 aagagtgaagggttagaga-ttgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |||||| |||||||||||| ||| ||  ||||||| |||||||||||| |||||| ||||||    
T  16245710 aagagttaagggttagagatttgcaatttttatctatttgcaacagagcaagttacctgttt 16245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 21303433 - 21303280
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||| ||||||| ||||||||||||||||||| |||||  |||||   |||| |||||||||||  ||||| ||||||| | ||||| || ||||||||    
T  21303433 accaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttattttaagttgactatataaaataa 21303334  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||| ||||||||||||||| ||  |||||||||||||||||||| ||||||    
T  21303333 aagagtaaagggttagagattgcaatttttatctgtttgcaacagagcaagtta 21303280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 21325360 - 21325514
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||| ||||||||| |||||||||||||||   |||| | |||| ||||||||||| | |||| ||||||| | || ||||| ||||||||    
T  21325360 accaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttacttattttaagttaacgatataaaataa 21325459  T
Q  101 aagag-tgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    ||||| ||||||||||||||||| ||  ||||||| |||||||||||| ||||||    
T  21325460 aagagttgaagggttagagattgcaatttttatctatttgcaacagagcaagtta 21325514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21301938 - 21302017
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| | |||| |||||||    
T  21301938 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttacttatttt 21302017  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 41508389 - 41508540
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaatta-ttttgatttgacgatttaaaataaa 101  Q
    ||||||||||||||||| ||||| |||||||||  | ||||||| | |||  ||||||||||| || ||| ||| |||| |||||||||  |||||||||    
T  41508389 caagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaatttgcattacttatttttaatttgacga--taaaataaa 41508486  T
Q  102 agagtgaagggttagaga-ttgtaatt--tatctgtttgcaacagagaaagtta 152  Q
    ||||| |||||||||||| ||| ||||  ||||||||||||||| || ||||||    
T  41508487 agagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaagtta 41508540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3116497 - 3116408
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgat 91  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| | |||| |||||||||||  ||||| ||||||| | ||||||||    
T  3116497 accaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttacttattttaagttgacgat 3116408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20429730 - 20429882
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga--tttgacgatttaaaat 98  Q
    ||||||||||||| ||||||||||||||||||||| | | |||||| |||||| |||| |||||| |||||| ||||||| |  ||||||||  || |||    
T  20429730 accaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgttacttatttttaagtttgacga--tataat 20429827  T
Q  99 aaaagagtgaagggttag-agattgtaa--tttatctgtttgcaacagagaaagtt 151  Q
    |||||||| ||||||||| || ||| ||  ||||| |||||||||||||| |||||    
T  20429828 aaaagagt-aagggttagaagtttgcaatttttatatgtttgcaacagagcaagtt 20429882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4650251 - 4650328
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatt 78  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| | ||||  |||||||||| |||||| |||||    
T  4650251 accaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt 4650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 2167696 - 2167536
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga-tttgacgatttaaaata 99  Q
    |||||||||||||||||||||||||||||||||||||||   | || | |||| |||||||||||  | ||| ||||||| | ||||||  | |||||||    
T  2167696 accaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattcacattacttatttttagtttgac--tataaaata 2167599  T
Q  100 aaagagtgaagggttagaga-ttgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    ||||||| || ||||||||| ||| ||  ||||||||||||||||| |  |||||| ||||||    
T  2167598 aaagagtaaatggttagagatttgcaatttttatctgtttgcaacataccaagttacctgttt 2167536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 8319059 - 8319186
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||  | |||| | |||||||||   |||| ||||||| | |||| ||| |||||||     
T  8319059 accaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttacttattttaagttgatgatataaaatac 8319158  T
Q  101 aagagtgaagggttagagattgtaattt 128  Q
    |||||  ||| ||||||||||| |||||    
T  8319159 aagagataagagttagagattgcaattt 8319186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 8557204 - 8557130
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||| |  |||||||| |||||| ||||||    
T  8557204 agtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 19925701 - 19925623
Alignment:
Q  2 ccaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||| | |||| |||||| |||| |||||| |||||||    
T  19925701 ccaagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttatttt 19925623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 8889229 - 8889152
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | |||| | | |||||||  ||||| |||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttatttt 8889152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 28728966 - 28729035
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgtta 72  Q
    |||||||||||||||||||||||||||||||||||||  ||||| | ||||  |||||||||| ||||||    
T  28728966 caagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgtta 28729035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 821593 - 821549
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  821593 accaagtaataaagtgataagtagagtatcgtatccacatggatt 821549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12411171 - 12411235
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||||| |||||||||||||||||||| |||||| | |||| | |||||||||    
T  12411171 accaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatt 12411235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 10744922 - 10745001
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| | |||| || |||||| |  | |||||||||||    
T  10744922 accaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtctaaacaaatcacattaattatttt 10745001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17438510 - 17438431
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||| ||||| |||||||||||||||| |||||||| |||||| | |||| |||||||||||  ||||| |||||||    
T  17438510 accaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttt 17438431  T

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Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12759407 - 12759445
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12759407 accaagtaataaagtgataagtagagtatcgtatccaca 12759445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10917938 - 10917983
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  10917938 accaaataataaagtgataagtagagtatcgtatccacatggattg 10917983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6289923 - 6289967
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  6289923 accaagtaataaagtgataagtagagtatcatatccacatggatt 6289967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 18458501 - 18458465
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  18458501 caagtaataaagtgataagtagagtatcgtatccaca 18458465  T

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Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22349429 - 22349493
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| |||||||||||||||||||||||||||||||||   |||| | |||| |||||||||||    
T  22349429 accaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaatt 22349493  T

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Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 13908304 - 13908261
Alignment:
Q  2 ccaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  13908304 ccaagtaataaagtgataagtagagtatcatatccatagggatt 13908261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 16230019 - 16229976
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  16230019 caagtaataaagtagtaagtagagtatcgtatccacagggattg 16229976  T

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Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19171913 - 19171834
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||| |||| ||| ||| |||| |||||| | |||| ||||||||||| || ||| |||||||    
T  19171913 accaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaaacaatttgcattacttatttt 19171834  T

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Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 932765 - 932826
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||| |||||| ||||||||||||||||||| ||||| | |||| |||||| ||||    
T  932765 aagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaatt 932826  T

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Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 2723846 - 2723747
Alignment:
Q  69 gttaattattttgatttgacgatttaaaataaaagagtgaagggttagagattgtaa---tttatctgtttgcaacagagaaagttatctgtttcgttgc 165  Q
    |||| |||||||  ||||| ||| ||||||||| |||| |||||||||| |||| ||   ||||||||||||||||| || |||||| |||||| |||||    
T  2723846 gttacttattttagtttgatgatataaaataaatgagttaagggttagatattgcaaatttttatctgtttgcaacaaagcaagttacctgtttggttgc 2723747  T

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Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8765137 - 8765182
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  8765137 accaattaataaagtgataagtaaagtatcgtatccacatggattg 8765182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8770039 - 8770084
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||||    
T  8770039 accaagtaataaagtgataagtaaagtatcatatccacatggattg 8770084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 17155880 - 17155978
Alignment:
Q  69 gttaattattttgatttgacgatttaaaataaaagagtgaagggttagagattgtaattt--atctgtttgcaacagagaaagttatctgtttcgttgc 165  Q
    |||| |||||||  ||| ||||| ||||| |||||||| | |||||||| |||| |||||  ||||||||||||||||| |||||| || ||| |||||    
T  17155880 gttacttattttagtttaacgatataaaaaaaaagagttacgggttagaaattgcaatttttatctgtttgcaacagagcaagttacctatttggttgc 17155978  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 5508357 - 5508434
Alignment:
Q  2 ccaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||| ||||||  |||||||| |||||| | |||| ||||||||  | |||||| |||||||    
T  5508357 ccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttacttatttt 5508434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10923167 - 10923245
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||||||| || ||||||||||||||  ||||||   |||| || ||||| || ||||||| |||||    
T  10923167 accaagtaataaagtgataattacagtatcgtatccacgaggattgttgtttcatctaaacagttcgcgttaactattt 10923245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 21825943 - 21825870
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||| |||||||||||||||||||||| |||||    |||| |||||||| || |||||| ||||||    
T  21825943 agtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttacttattt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31286093 - 31286017
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||   |||| |||||||||||  ||||| ||||||    
T  31286093 accaagtaataaagtg-taactagaatatcgtatccacagggattg-tgtttcgtccaaacaatttccgttacttattt 31286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 11518038 - 11518001
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacag 40  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  11518038 caagtaataaagtgataagtagaatatcatatccacag 11518001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11533054 - 11533017
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccac 38  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  11533054 accaaataataaagtgataagtagagtaccgtatccac 11533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 19910020 - 19909975
Alignment:
Q  20 agtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||| | |||||| | |||||||    
T  19910020 agtagagtatcgtatccacagggattgtcctttctttcgaacaatt 19909975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21019674 - 21019630
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||    
T  21019674 accaagtaataaagt-ataagtagagtatcttatccacaaggattg 21019630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19908327 - 19908391
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| ||||||| ||||||||| ||||||||||||||| || | | | |||| |||||||||||    
T  19908327 accaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaatt 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 52517869 - 52517834
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||| ||||||||||||||||    
T  52517869 caagtaataaagtgataagt-gagtatcgtatccaca 52517834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 3734616 - 3734776
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||   |||  |||||||||||  ||||| ||||||| | |||||||| ||||||||    
T  3734616 accaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttacttattttaagttgacgatataaaataa 3734715  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |||||| |||||||| |||||| ||  |||||||||||||||||||| |||||| ||||||    
T  3734716 aagagttaagggttaaagattgcaaattttatctgtttgcaacagagcaagttacctgttt 3734776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 7318293 - 7318446
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||| || |||||  | || ||| ||||||| | |||||||| ||||||||    
T  7318293 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcattacttattttaagttgacgatataaaataa 7318392  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||  ||||||||||||||| ||  |||||||||||||||||||| ||||||    
T  7318393 aagagataagggttagagattgcaatttttatctgtttgcaacagagcaagtta 7318446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 17153233 - 17153073
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||| | |||| || |||||  | |||||| ||||||| | |||||||  ||||||||    
T  17153233 accaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgttacttattttaagttgacgacataaaataa 17153134  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |||||  |||||||||||||||| |  ||||||||||||||||| || |||||| ||||||    
T  17153133 aagagataagggttagagattgttatttttatctgtttgcaacaaagcaagttacctgttt 17153073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 4785856 - 4785976
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| | |||| ||||| || ||  ||||| ||||||| | |||||||| ||||||||    
T  4785856 accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttatttttagttgacgatataaaataa 4785955  T
Q  101 aagagtgaagggttagagatt 121  Q
    |||||| ||||||||||||||    
T  4785956 aagagttaagggttagagatt 4785976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 4818856 - 4818976
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| | |||| ||||| || ||  ||||| ||||||| | |||||||| ||||||||    
T  4818856 accaagtaataaagtgataagtagagtatcacatccacagggattgtcgtttcgtccaagcacttcacgttacttatttttagttgacgatataaaataa 4818955  T
Q  101 aagagtgaagggttagagatt 121  Q
    |||||| ||||||||||||||    
T  4818956 aagagttaagggttagagatt 4818976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9574427 - 9574578
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||   |||| || |||| | | |||||| ||||||| | |||||||| ||||||||    
T  9574427 accaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgactcgcgttatttattttaagttgacgatataaaataa 9574526  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagt 150  Q
    |||||| |||||||||| |||||||  ||||||||||||||| |||| ||||    
T  9574527 aagagttaagggttagaaattgtaatttttatctgtttgcaatagagcaagt 9574578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 8313474 - 8313318
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatta---gcgttaattattttgatttgacgatttaaaa 97  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | |||| || |||||| ||   | |||| ||||||| | |||| | | |||||    
T  8313474 accaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttattttaagttgaaggtataaaa 8313375  T
Q  98 taaaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    ||||||||| ||||||||||||||| ||  ||||||||||| |||||||| ||||||    
T  8313374 taaaagagttaagggttagagattgcaatttttatctgttttcaacagagcaagtta 8313318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 6013615 - 6013740
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    |||||| | |||||||||||||||||||||||||||| |||||  |||||  ||||||||||| || ||| |||||||  ||||| ||| ||||||||||    
T  6013615 caagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttacttattttagtttgatgatataaaataaaa 6013714  T
Q  103 gagtgaagggttagagattgtaattt 128  Q
    |||| ||||||||| ||||| |||||    
T  6013715 gagtaaagggttagcgattgcaattt 6013740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 11803103 - 11803179
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||||| |||||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttatttt 11803179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 10587103 - 10586957
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | |||| || |||||| |   |||| ||||||| | || || || ||||||||    
T  10587103 accaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatgttacttattttaagtttacaatataaaataa 10587004  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagag 145  Q
    ||||   |||||||| |||||| ||  ||||||||||||||||||||    
T  10587003 aagaaataagggttaaagattgcaatttttatctgtttgcaacagag 10586957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 15869615 - 15869820
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||||||||||||||||||||| || |||||    |||  || ||| | |  |||||| ||||||| | |||||||| ||||||||    
T  15869615 accaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgttacttattttaagttgacgatataaaataa 15869714  T
Q  101 aagagtgaagggttagagattgtaattt-atctgtttgcaacagagaaagttatctg--tttcgttgcnnnnnnngtaaacaacggttaggactcttcga 197  Q
    || ||  ||||||| ||||||| ||||| |||||||||||| ||| ||||||| |||  ||| |||||       |||||||||||||||||||||| ||    
T  15869715 aatagataagggtttgagattgcaattttatctgtttgcaatagaaaaagttacctgtttttggttgc-ataaaagtaaacaacggttaggactctttga 15869813  T
Q  198 atccccc 204  Q
    |||||||    
T  15869814 atccccc 15869820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1848306 - 1848227
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| | |||| ||||||||||| |||||| |||||||    
T  1848306 accaagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttt 1848227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3329737 - 3329658
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||  |||||| |||||||    
T  3329737 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttacttatttt 3329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 7492338 - 7492182
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga-tttgacgatttaaaataaaag 103  Q
    ||||||||| ||||||||||||||||||||||||| ||||||   |||| | ||||||||| || ||| ||||||| | ||||| ||  || ||||||||    
T  7492338 agtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatttttattttgatga--tataataaaag 7492241  T
Q  104 agtgaagggttagaga-ttgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    ||| |||||||||||| ||| ||  |||| ||||||||||||||| |||||| ||||||    
T  7492240 agttaagggttagagatttgcaatttttaactgtttgcaacagagcaagttacctgttt 7492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9864405 - 9864327
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| | |||| || |||||||| |||||| ||||||    
T  9864405 accaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgttacttattt 9864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8979085 - 8979005
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttg 81  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||   |||| ||||||||||| || ||| ||||||||    
T  8979085 accaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattttg 8979005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 9731703 - 9731627
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||| |||||||||||||||||||||||| ||||| |||||| | |||| ||||||||||| |||||| |||||||    
T  9731703 aagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttacttatttt 9731627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18369059 - 18368995
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| | |||| |||||||||||    
T  18369059 accaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaatt 18368995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 3191134 - 3190973
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaaga 104  Q
    ||||||||||||| ||||| |||||  |||| | |||||||| | |||| ||||||||||| | |||| ||||||| | |||| ||| ||||| |||||     
T  3191134 agtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaattcgtgttatttattttaagttgaggatataaaacaaaagg 3191035  T
Q  105 gtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgtttcgttgc 165  Q
    ||   ||||||||||||||||  ||||| |||||||||||||  ||||||||| ||| |||||    
T  3191034 gttttgggttagagattgtaatttttatatgtttgcaacaga-caagttatctatttggttgc 3190973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4986575 - 4986702
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||| | |||||||||| ||| ||||| |||||| | |||| || ||| |  | |||||| ||||||| | ||||||||  |||||||    
T  4986575 accaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttacttattttaagttgacgataaaaaataa 4986674  T
Q  101 aagagtgaagggttagagattgtaattt 128  Q
    ||| || ||||||||||||||| |||||    
T  4986675 aagtgttaagggttagagattgcaattt 4986702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4990673 - 4990800
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||| | |||||||||| ||| ||||| |||||| | |||| || ||| |  | |||||| ||||||| | ||||||||  |||||||    
T  4990673 accaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttacttattttaagttgacgataaaaaataa 4990772  T
Q  101 aagagtgaagggttagagattgtaattt 128  Q
    ||| || ||||||||||||||| |||||    
T  4990773 aagtgttaagggttagagattgcaattt 4990800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13759939 - 13759860
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||| | |||| |||||||| || |||||| |||||||    
T  13759939 accaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttatttt 13759860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1584564 - 1584653
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgat 91  Q
    |||||||||||||||||||||| |||||||||||||||||||||||   |||| || |||||| | |||||| ||||||| | ||||||||    
T  1584564 accaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgttacttattttaagttgacgat 1584653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2563838 - 2563915
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| | |||| ||||||||||| | |||| ||||||    
T  2563838 accaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttattt 2563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 16365725 - 16365844
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaatta-ttttgatttgacgatttaaaata 99  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||| | |||  | ||||||||| |||||| ||| |||| | |||||||  || ||||    
T  16365725 accaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttatttttaagttgacga--tataata 16365822  T
Q  100 aaagagtgaagggttagagatt 121  Q
    ||||||| |||| |||||||||    
T  16365823 aaagagttaaggtttagagatt 16365844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18662461 - 18662539
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||| | |||||||||||||||||||||||||||||| |||||| | |||| |||||||||||  ||||| ||||||    
T  18662461 accaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 1584306 - 1584379
Alignment:
Q  55 tccaaacaattagcgttaattattttgatttgacgatttaaaataaaagagtgaagggttagagattgtaattt 128  Q
    |||||| |||| |||||| |||||||| ||||||||| |||||||||||||| || |||||||||||| |||||    
T  1584306 tccaaataatttgcgttacttattttgttttgacgatataaaataaaagagttaaaggttagagattgcaattt 1584379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31492950 - 31493031
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga 82  Q
    |||| |||||||||||||||||||||||||||||||||| |||||| | |||  ||||||||||| |  ||| |||||||||    
T  31492950 accaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgttttacttattttga 31493031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5108586 - 5108649
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| | |||| |||||||||||    
T  5108586 accaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 5108649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8054568 - 8054504
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| |||||||||||||||||||||||||||| |||||| |||| | |||| |||||||||||    
T  8054568 accaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaatt 8054504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 11221240 - 11221164
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||| ||||||||||||||| |||||||||||||||| | |||| |  |||||||| |||||| |||||||    
T  11221240 aagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttatttt 11221164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 12181631 - 12181748
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttc-ttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    |||||||||||||| |||||||||| |||||||||| | |||| | |||| | |||||||||| | |||| ||||||| | |||||||  |||| |||||    
T  12181631 aagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttacttattttaagttgacga--taaattaaaa 12181728  T
Q  103 gag-tgaagggttagagatt 121  Q
    ||| ||||||||||||||||    
T  12181729 gagttgaagggttagagatt 12181748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13418553 - 13418633
Alignment:
Q  1 accaagtaataaa-gtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| | |||| |||||||| ||  ||||| |||||||    
T  13418553 accaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttatttt 13418633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16297899 - 16297835
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||| |||||||||||| |||||||| |||| |||||| |||||| |||||||||||    
T  16297899 accaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaatt 16297835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 16306716 - 16306792
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||||||||||||||||||||||| ||| |||||  |||||| || |||||||| || ||| ||||||    
T  16306716 caagtaataaagtgataagtagagtatcgtatctacaaggattatcatttcatctaaacaatttgcattacttattt 16306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23100031 - 23099967
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||| | |||| |||||||||||    
T  23100031 accaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 23099967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 322
Target Start/End: Complemental strand, 37519171 - 37519067
Alignment:
Q  218 agggtccaagttgtttgacgcctatatcacggaaatacaactccaaaaaaggctataaataccacttttgagatcattcttacggcatgacaaaaatagt 317  Q
    ||||| |||||||||||  |||||  |||| |||||||||  |||  |||||||||||||||| |||||||||||||||||| ||||| ||  |||||||    
T  37519171 agggtacaagttgtttggagcctaagtcacagaaatacaagcccatgaaaggctataaataccccttttgagatcattcttaaggcataacttaaatagt 37519072  T
Q  318 actaa 322  Q
     ||||    
T  37519071 tctaa 37519067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 1587704 - 1587855
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaag 103  Q
    ||||| ||||||||||| ||||||||| |||| |||  ||| |   |||| ||||||||||| ||||||  ||||||| ||||||||| |||||||||||    
T  1587704 aagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaattcgcgttacctattttgttttgacgatataaaataaaag 1587803  T
Q  104 agtgaagggtt--agagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    | |  ||||||  |||||||| ||  ||||| |||||||||||||| ||||||    
T  1587804 a-tttagggttagagagattgcaatttttatttgtttgcaacagagcaagtta 1587855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18449262 - 18449340
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||||||| ||||| | ||||||||||| |||||||| | ||||  |||||||||| |||||| ||||||    
T  18449262 accaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaattggcgttacttattt 18449340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8877441 - 8877486
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||    
T  8877441 accaagtaataaggtgataagtagagtatcgtatccacatggattg 8877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10937622 - 10937667
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  10937622 accaagtaataaagtgataagtatagtatcgtatccacatggattg 10937667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 13277525 - 13277602
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||| |||||||| |||||||||||||||||| |||||| | |||| ||| |||||||   ||||||||||||    
T  13277525 caagtaatacagtgataaatagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttt 13277602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 17203047 - 17203122
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||| |||||||||||||||||| ||| ||||||| | |||| ||||||||||  |||||| |||||||    
T  17203047 aagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttatttt 17203122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 39273251 - 39273175
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||| || | |||||| | |||| |||||| |||| | |||| |||||||    
T  39273251 aagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttt 39273175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 16059099 - 16059036
Alignment:
Q  3 caagtaataaagtga-taagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||| | |||||||||||||||||||||| |||||| | |||| |||||||||||    
T  16059099 caagtaataaagttagtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaatt 16059036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 4449002 - 4449064
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||| ||||| ||||||||||||| || | |||  |||||||||||    
T  4449002 caagtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaatt 4449064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5530041 - 5530119
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||| ||||||||| || ||||||||||||| ||||  | |||| ||||||||||| | |||| ||||||    
T  5530041 accaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaatttgtgttacttattt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5797531 - 5797569
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5797531 accaagtaataaagtaataagtagagtatcgtatccaca 5797569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8054137 - 8054099
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  8054137 accaagtaataaagtgataattagagtatcgtatccaca 8054099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9916586 - 9916631
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||    
T  9916586 accacgtaataaagtaataagtagagtatcgtatccacatggattg 9916631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9924498 - 9924543
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||    
T  9924498 accacgtaataaagtaataagtagagtatcgtatccacatggattg 9924543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 18467474 - 18467535
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||||||| ||||| ||||||||| |||||| | |||| || ||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatt 18467535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 10584563 - 10584487
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||||||||| | ||||||||||||||| |||||| | |||| |  |||||||| | |||| ||||||    
T  10584563 caagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttacttattt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 18466031 - 18466103
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||||||||| |||||||| |||||||  | ||||  |||||||||| | |||| ||||||    
T  18466031 taataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttacttattt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 2350826 - 2350747
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| || |||||||| ||||||||||||| |||||| | |||  |||||| |||  ||||||| ||||||    
T  2350826 accaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaaataatccgcgttaaatatttt 2350747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 4579128 - 4579195
Alignment:
Q  12 aagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||||||||||||| || ||||| | |||  ||||||||||| | |||| ||||||    
T  4579128 aagtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttattt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6042481 - 6042559
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||| |||||||| || ||||||||||||||||||||||| | ||| | |||| | ||||||||| |||||| |||||||    
T  6042481 accatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttacttatttt 6042559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 10648598 - 10648677
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||| ||||||||| ||| | || |||||| | |||| || |||||||| | |||| |||||||    
T  10648598 accaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 35
Target Start/End: Original strand, 21227202 - 21227233
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatc 35  Q
    ||||||||||||||||||||||||||||||||    
T  21227202 aagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9245201 - 9245279
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||| ||| || |||| ||||||||||||||||| |||||| |||||| |  |||||||| | |||| ||||||    
T  9245201 accaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttacttattt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9500464 - 9500542
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||| ||||| | |||||||||||||||||| ||||||   |||| || |||||||| || ||| ||||||    
T  9500464 accaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattacttattt 9500542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 17077154 - 17077212
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||| ||||||||| |||||||  ||||||| | |||| |||||||||||    
T  17077154 taataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaatt 17077212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20582279 - 20582340
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| ||||||||||||||||   ||||||||||||||||||| | | ||||||||| ||||||    
T  20582279 accaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaatt 20582340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21102372 - 21102334
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  21102372 accaagtaataaagtgataagtagagtattgtattcaca 21102334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7397216 - 7397260
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||    
T  7397216 accaagtaataaagtg-taactagagtatcgtatccacatggattg 7397260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 14195924 - 14195891
Alignment:
Q  126 tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |||||||||||||||||||| |||||||||||||    
T  14195924 tttatctgtttgcaacagagcaagttatctgttt 14195891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 18661617 - 18661654
Alignment:
Q  8 aataaagtgataagtagagtatcgtatccacagggatt 45  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  18661617 aataaagtgataagtagagtattgtatccacaaggatt 18661654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 22339381 - 22339312
Alignment:
Q  10 taaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||| ||||||| |||| || |||||| | |||| ||||||||||| || ||| ||||||    
T  22339381 taaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttacttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9261224 - 9261276
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttc 53  Q
    ||||||||| ||| ||||||| ||||||||||||||| | |||||| ||||||    
T  9261224 accaagtaaaaaaatgataagcagagtatcgtatccatatggattgtcatttc 9261276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 17829686 - 17829749
Alignment:
Q  98 taaaagagtgaagggttagagattgtaattt--atctgtttgcaacagagaaagttatctgttt 159  Q
    |||| |||| ||||||||| |||||||||||  ||||||||||||||||  |||||| ||||||    
T  17829686 taaaggagttaagggttagcgattgtaatttttatctgtttgcaacagaacaagttaactgttt 17829749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21230332 - 21230376
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    ||||| ||||||| |||||||||||||||||||| || |||||||    
T  21230332 accaaataataaaatgataagtagagtatcgtattcatagggatt 21230376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 4e-36; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 12578345 - 12578185
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||| |||||||||||||| |||||||||||||||||| |||||| | |||  ||||||||||| |||||  ||||||| | |||||||| ||||||||    
T  12578345 accaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttcttattttaagttgacgatataaaataa 12578246  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |||||| ||||||||||||||  ||  |||||||||||||||||||| |||||| ||||||    
T  12578245 aagagtaaagggttagagattacaatttttatctgtttgcaacagagcaagttacctgttt 12578185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 11490554 - 11490694
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||||| |||||||  ||||||||| ||||||||||    
T  11490554 caagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttattttagtttgacgatataaaataaaa 11490653  T
Q  103 gagtgaagggttagagattgtaa--tttatctgtttgcaaca 142  Q
    ||||  || ||||||||||| ||  ||||||||||| |||||    
T  11490654 gagt-tagtgttagagattgcaatttttatctgttttcaaca 11490694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 17672022 - 17672175
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||   |||| || |||||| | |||||| ||||||| | || ||||| ||||||||    
T  17672022 accaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgttacttattttaagttaacgatataaaataa 17672121  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||| || |||||||||||| ||  |||||||||||||||||||| ||||||    
T  17672122 aagagttaaaggttagagattgcaatttttatctgtttgcaacagagcaagtta 17672175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 22176039 - 22175915
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    ||||||||||||||||||||||||||| ||||||| || ||||| |||||  ||||||||||| ||| |||||||||||| |||| ||| ||||||||||    
T  22176039 caagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcg-taattattttgagttgatgatataaaataaaa 22175941  T
Q  103 gagtgaagggttagagattgtaattt 128  Q
    |||| ||||||||||||||| |||||    
T  22175940 gagttaagggttagagattgcaattt 22175915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 14648915 - 14649067
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | ||||||| ||| |  | | |||| ||||||| | |||||||| ||||||||    
T  14648915 accaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagctcgtgttacttattttaagttgacgatataaaataa 14649013  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    ||||   ||||||||||||||  ||  |||||||||||||||||||| ||||||    
T  14649014 aagacataagggttagagatttcaatttttatctgtttgcaacagagcaagtta 14649067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 5679225 - 5679391
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||| |||||||||||||||| ||| | | |    |||| ||||||||||| |||||| ||||||| | || ||||| ||||||||    
T  5679225 accaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttacttattttaagttaacgatataaaataa 5679324  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgtttcgttgc 165  Q
    |||||| |||||||||| |||| ||  |||||||||||| ||||||| |||||| || ||| |||||    
T  5679325 aagagttaagggttagacattgcaatttttatctgtttgtaacagagcaagttacctatttggttgc 5679391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 17337210 - 17337063
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaaga 104  Q
    |||||||| |||||||||||||||||||||||| || ||||| |||||| ||||||||||| |||||| ||||||| | |||||||  || |||||||||    
T  17337210 agtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttagttgacga--tataataaaaga 17337113  T
Q  105 gtgaagggttagaga-ttgtaa--tttatctgtttgcaacagagaaagtt 151  Q
    || ||||||| |||| ||| ||  ||||||||||| |||||||| |||||    
T  17337112 gtaaagggtttgagatttgcaatttttatctgtttacaacagagcaagtt 17337063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 17951375 - 17951222
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||| |||||||||||||| |||||||||||||  ||  ||| | |||| || ||  |  | |||||| ||||||| | |||||||| ||||||||    
T  17951375 accaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgttacttattttaagttgacgatataaaataa 17951276  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||||| ||||||||||||| ||  |||||||||||||||||||| ||||||    
T  17951275 aagagtgacgggttagagattgcaatttttatctgtttgcaacagagcaagtta 17951222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 17955227 - 17955074
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||| |||||||||||||| |||||||||||||  ||  ||| | |||| || ||  |  | |||||| ||||||| | |||||||| ||||||||    
T  17955227 accaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgttacttattttaagttgacgatataaaataa 17955128  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||||| ||||||||||||| ||  |||||||||||||||||||| ||||||    
T  17955127 aagagtgatgggttagagattgcaatttttatctgtttgcaacagagcaagtta 17955074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13908874 - 13908953
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||| | |||| |||||||    
T  13908874 accaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttt 13908953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 19092317 - 19092475
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    ||||||||||||||||||| ||||||||| || |||| |||||| | |||| ||||||||| |  ||||  ||||||| | |||||||| | ||||||||    
T  19092317 caagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgcttattttaagttgacgatattaaataaaa 19092416  T
Q  103 gagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |||  ||| ||||||||||| ||  ||||||||||| |||||||| || ||| ||||||    
T  19092417 gagataagagttagagattgcaatttttatctgtttacaacagagtaaattacctgttt 19092475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15164787 - 15164866
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||| || | ||||| |||||||||||||||||||||||| |||||| ||||||||||| |||||| |||||||    
T  15164787 accaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttatttt 15164866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19492779 - 19492700
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||| |||||||||||||||||||||||| | |||| | |||| ||||||||||| |||||| |||||||    
T  19492779 accaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttatttt 19492700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 19636662 - 19636546
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga-tttgacgatttaaaataaaa 102  Q
    ||||||||||||| |||||||||||| ||||| | |||||||| | |||| |||||||||||   |||| ||||||| | ||||||||  ||||||||||    
T  19636662 aagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttattttaagtttgacga--taaaataaaa 19636565  T
Q  103 gagtgaagggttagagatt 121  Q
    |||| ||||||||||||||    
T  19636564 gagttaagggttagagatt 19636546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 19882662 - 19882738
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||| |||||||||||||||| ||| |||||| | |||| ||||||||||| |||||| ||||||    
T  19882662 caagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13128953 - 13128874
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||| | |||| ||||||||| | |||||| |||||||    
T  13128953 accaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttacttatttt 13128874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13692748 - 13692669
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| | ||||  |||||||||| | |||| |||||||    
T  13692748 accaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttatttt 13692669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 19929754 - 19929608
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||| | |||| || ||| |    | |||| ||||||| | ||||| || ||||||||    
T  19929754 accaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttacttattttaagttgacaatataaaataa 19929655  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagag 145  Q
    |||||  |||||||| |||||  ||  ||||||||||||||||||||    
T  19929654 aagagataagggttaaagatttcaatttttatctgtttgcaacagag 19929608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20315020 - 20315098
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||| ||||||||||| |||| |||||||| |||||| | |||| ||||||||||| |||||| ||||||    
T  20315020 accaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7582317 - 7582397
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttg 81  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||   |||| ||||||||||  || ||| ||||||||    
T  7582317 accaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattttg 7582397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17216837 - 17216901
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||| | |||| |||||||||||    
T  17216837 accaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaatt 17216901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24639533 - 24639469
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  | |||  |||||||||||    
T  24639533 accaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaatt 24639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21323954 - 21323875
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||| |||||| ||||| ||||||||||||||||||||  ||||| | |||| ||||||||||| |||||| |||||||    
T  21323954 accaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgttacttatttt 21323875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25121304 - 25121227
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||   |||| ||||||||||| |||||| ||||||    
T  25121304 accaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttacttattt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13992955 - 13992874
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga 82  Q
    |||||||||||||||| |||||||||||||||||||||| |||||  | |||  ||||||||||| | |||| |||| ||||    
T  13992955 accaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaattcgtgttacttatgttga 13992874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17709777 - 17709822
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  17709777 accaagtaataaagtgataagtagagtattgtatccatagggattg 17709822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 8969797 - 8969600
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaag 103  Q
    ||||||||||||| ||||||||| | |||||| || | ||||| | |||| ||||||||||| | |||| |||||||| ||||||||  || ||||||      
T  8969797 aagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacga--tataataaa-- 8969703  T
Q  104 agtgaagggttagagattgtaatt--tatctgtttgcaacagagaaagttatctgtttcgttgcnnnnnnngtaaacaacggttaggactcttcgaatcc 201  Q
      | ||||||||||||||| ||||  ||||| | |||||||||| ||||||  | ||| |||||       |||| ||| ||||||||||||||||||||    
T  8969702 --ttaagggttagagattgcaatttatatctatatgcaacagagcaagttacattttttgttgc-aaattagtaagcaatggttaggactcttcgaatcc 8969606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19562257 - 19562193
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||| |||||||| |||||| | |||| | |||| |||||||||||    
T  19562257 accaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatt 19562193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 11521264 - 11521210
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaac 61  Q
    |||||||||||||||||||||||||||| |||| |||||| | ||||||| ||||    
T  11521264 taataaagtgataagtagagtatcgtatacacatggattgtcgtttcttctaaac 11521210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11933439 - 11933524
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttga 87  Q
    |||||||||| ||||||||||| |||||||||  ||||| |||||| | |||| ||||||||| | |||||| ||||||| ||||||    
T  11933439 accaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttacttattttaatttga 11933524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 12839859 - 12839781
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||| ||||||| ||||| ||||||||||||||||||| |||||| ||||||   | ||||||| || ||||||||||    
T  12839859 accaattaataaaatgataggtagagtatcgtatccacaaggattgtcatttcaatctaacaattcgcattaattattt 12839781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 16730468 - 16730399
Alignment:
Q  11 aaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||| | |||||  | |||| ||||||||| | |||||| |||||||    
T  16730468 aaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttatttt 16730399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15047148 - 15047192
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||    
T  15047148 accaagtaataaagtgataagtagaggatcgtatctacatggatt 15047192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15107276 - 15107232
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||    
T  15107276 accaagtaataaagtgataagtagaggatcgtatctacatggatt 15107232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 22357614 - 22357484
Alignment:
Q  1 accaagtaataaagtgataagtagag---tatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaa 97  Q
    ||||||||||||||||||||||| ||   ||||||||||||| |||||| | |||| |  ||||| || | |||| ||||||  | |||||||| |||||    
T  22357614 accaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttcatttaaacagttcgtgttacttatttaaagttgacgatataaaa 22357515  T
Q  98 taaaagagtgaagggttagagattgtaattt 128  Q
     | |||||  ||| ||||||||||| |||||    
T  22357514 aataagagataagagttagagattgcaattt 22357484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 22526390 - 22526422
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||||||||||||||||    
T  22526390 taataaagtgataagtagagtatcgtatccaca 22526422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 40227796 - 40227911
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga-tttgacgatttaaaata 99  Q
    ||||||||||||||||||||||  | ||| ||||||| ||| ||||   |||| ||||||||||| |||||| ||||||| | ||||||||  ||| |||    
T  40227796 accaagtaataaagtgataagt-taatattgtatccataggaattgtagtttcatccaaacaattcgcgttacttatttttagtttgacga--taatata 40227892  T
Q  100 aaagagtgaagggttagag 118  Q
    ||||||| ||||| |||||    
T  40227893 aaagagtaaagggctagag 40227911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11700648 - 11700610
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  11700648 accaagtaataaaatgataaatagagtatcgtatccaca 11700610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23080361 - 23080439
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||| |||||| |||||||||||| ||| |||| |||| |||||| | ||||  |||||||||| |||||| ||||||    
T  23080361 accaaataataaggtgataagtagaatattgtattcacatggattgtcgtttcaaccaaacaatttgcgttacttattt 23080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 25643485 - 25643534
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttc 53  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||| ||||||    
T  25643485 caagtaataaagtg-taactagagtatcgtatccacaggggttgtcatttc 25643534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10589732 - 10589776
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||    
T  10589732 accaagtaataaagtgataagt-gagtgtcgtatcaacagggattg 10589776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9737588 - 9737512
Alignment:
Q  1 accaagtaataaagtgat-----aagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgtta 72  Q
    ||||||||||||||||||     ||||||||||||||||||||| ||||||   |||| || |||||||| ||||||    
T  9737588 accaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtctaaacaatttgcgtta 9737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 12318453 - 12318481
Alignment:
Q  1 accaagtaataaagtgataagtagagtat 29  Q
    |||||||||||||||||||||||||||||    
T  12318453 accaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 25097856 - 25097900
Alignment:
Q  3 caagtaataaagtga-taagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||    
T  25097856 caagtaataaagttagtaagtagagtatcgtatccacatggattg 25097900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 6e-35; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 15466390 - 15466600
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaa-aata 99  Q
    |||||||||||||||| || ||||||||||||||| | |||||||| |||||| || |||||||| |||||| |||||||| ||| ||||| ||| ||||    
T  15466390 accaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttagttattttgttttaacgatataataata 15466488  T
Q  100 aaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgtttcgttgcnnnnnnngtaaacaacggttaggactcttcga 197  Q
    ||||||| ||||||||||||||| ||  |||||||||||||||||||| |||||| || ||| |||||       ||||||| ||||||| ||||||| |    
T  15466489 aaagagttaagggttagagattgcaaattttatctgtttgcaacagagcaagttacctatttggttgc-agaaaagtaaacagcggttagaactcttcaa 15466587  T
Q  198 atccccctatctt 210  Q
    ||||| |||||||    
T  15466588 atccctctatctt 15466600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 9838380 - 9838529
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaaga 104  Q
    ||||||||||||||||||||||||| ||||||||| |||||| |||||  |  |||||| | |||||| |||||||  ||||||||| ||||||||||||    
T  9838380 agtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttattttagtttgacgatataaaataaaaga 9838479  T
Q  105 gtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||| ||||||||||||||  ||||||||||||||| |||| ||||||    
T  9838480 gtgaagcgttagagattgtaatttttatctgtttgcaaaagagcaagtta 9838529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 12183410 - 12183201
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||| ||| |||||||  ||||| ||||||| |  ||||||| ||||||||    
T  12183410 accaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaattcacgttacttattttaaggtgacgatataaaataa 12183311  T
Q  101 aagag-tgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgtttcgttgcnnnnnnngtaaacaacggttaggactcttcga 197  Q
    ||||| | || |||||||||||| ||  ||||||||||||||||| || |||||| |||||| | |         |||| |||||||||||| |||||||    
T  12183310 aagagtttaaaggttagagattgcaatgtttatctgtttgcaacatagcaagttacctgttttggttacagaaaagtaagcaacggttaggattcttcga 12183211  T
Q  198 atccccctat 207  Q
    ||||||||||    
T  12183210 atccccctat 12183201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 28933733 - 28933586
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaagagt 106  Q
    ||||||||||||||||||||||||||||||||| |||||  | |||| ||||||||||| | |||  ||||||| | |||| ||| |||||||||||||     
T  28933733 taataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgcttattttaagttgatgatataaaataaaagaga 28933634  T
Q  107 gaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
     ||||||||||||||| ||  |||||||||||||||||||| ||||||    
T  28933633 taagggttagagattgcaatttttatctgtttgcaacagagcaagtta 28933586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 23645846 - 23645693
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | |||| |||||||||||| |||||||||||||      |  |  ||||||||    
T  23645846 accaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaacaataaaataaaataa 23645747  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    ||||||  |||||||||||||| ||  ||||| |||||||||||||| ||||||    
T  23645746 aagagttgagggttagagattgcaatttttatttgtttgcaacagagcaagtta 23645693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22567860 - 22568005
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||| |||| ||||| ||||| ||||||||| ||||||   |||| ||||||||| |  ||||| ||||||| | || ||||| ||||||||    
T  22567860 accaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaactcacgttacttattttaagttaacgatataaaataa 22567959  T
Q  101 aagagtgaagggttagagattgtaa-tttatctgtttgcaacagag 145  Q
    ||| || |||||||||||||||||| ||||||||||||||||||||    
T  22567960 aagggttaagggttagagattgtaattttatctgtttgcaacagag 22568005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 11176974 - 11177130
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaaga 104  Q
    |||| |||||||||||||||||||||||||||||| || ||| | ||||||| ||| |||| | |||| ||||||| | |||||||| ||||||||||||    
T  11176974 agtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataattcgtgttacttattttaaattgacgatataaaataaaaga 11177073  T
Q  105 gtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |  |||||||||| |||| ||  |||||  |||||||||| || |||||| ||||||    
T  11177074 gataagggttagaaattgcaatttttataagtttgcaacatagcaagttacctgttt 11177130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 21907452 - 21907607
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| | |||| |||||| || | |||||| ||| ||| | |||| ||| ||||||||    
T  21907452 accaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgttacttaatttaagttgatgatataaaataa 21907551  T
Q  101 aagagtgaagggttagagatt--gtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||  |||||||||| |||   |||  |||||||||||||||||||| ||||||    
T  21907552 aagagataagggttagaaattacataatttttatctgtttgcaacagagcaagtta 21907607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 8241300 - 8241460
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaag 103  Q
    |||||| ||||||||||||||||||||||||||||| || ||| | |||  |||||||||||  | ||| |||||||  ||| ||||| |||||||||||    
T  8241300 aagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaattcacattacttattttagtttcacgatataaaataaaag 8241397  T
Q  104 agtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgtttcgttg 164  Q
    ||| ||| ||||||||||| ||  ||||||||||||||||| || |||||| |||||| ||||    
T  8241398 agttaagagttagagattgcaatttttatctgtttgcaacatagcaagttacctgtttggttg 8241460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9726042 - 9726120
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||| |||||| ||||||    
T  9726042 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 21688871 - 21688753
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaag 103  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| | || | |||||| |||| |||||| ||||||||| |||| ||| |||||||||||    
T  21688871 aagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttacttattttgagttgaagatataaaataaaag 21688772  T
Q  104 agtgaagggttagagattg 122  Q
    ||| |  ||||||||||||    
T  21688771 agttagaggttagagattg 21688753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 4339761 - 4339915
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaagagt 106  Q
    ||||||||||||||||||||||| |||||||||  ||||| | |||  ||||| ||||| || ||| |||||||  ||||||||| |||||||||||||     
T  4339761 taataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattacttattttagtttgacgatataaaataaaagaga 4339860  T
Q  107 gaagggttagagattgta--atttatctgtttgcaacagagaaagttatctgttt 159  Q
     ||||||||||||||  |  |||||| ||||||||||  || |||||| ||||||    
T  4339861 taagggttagagattacaatatttatttgtttgcaactaagcaagttacctgttt 4339915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 17827168 - 17827092
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||| |||| |||||||||||||||||| |||||| | |||||||||||||||| |||||| |||||||    
T  17827168 aagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttatttt 17827092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 9516809 - 9516884
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||| | |||||| |||||||    
T  9516809 agtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttatttt 9516884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 22410406 - 22410327
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | |||| | |||||||||  ||||| |||||||    
T  22410406 accaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttt 22410327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21672514 - 21672424
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgat 91  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  | |||| ||||||||||| | |||| || |||| | ||||||||    
T  21672514 accaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttacttttttttagttgacgat 21672424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23143742 - 23143806
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| | |||| |||||||||||    
T  23143742 accaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaatt 23143806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 17729172 - 17729243
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgtta 72  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| | |||| ||||||| ||| ||||||    
T  17729172 accaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgtta 17729243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 21679927 - 21679840
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgat 91  Q
    |||||||||||||||||||||||||||||||||||| |||||  | |||| ||||||||||| | |||| || |||| | ||||||||    
T  21679927 aagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttacttttttttagttgacgat 21679840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27737768 - 27737689
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||   |||| ||||||||||| |||||| |||||||    
T  27737768 accaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttacttatttt 27737689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17299910 - 17299832
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||| | |||  ||||||||||| |||||| ||||||    
T  17299910 accaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 23009471 - 23009414
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaa 60  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  23009471 caagtattaaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa 23009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 23778893 - 23778950
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaa 60  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  23778893 caagtattaaagtgataagtagagcatcgtatccacagggattgtcctttcttccaaa 23778950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23844544 - 23844465
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| |||||||||||||||| |||| | |||||||| | |||| ||||||||| | |||||| |||||||    
T  23844544 accaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttt 23844465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25927382 - 25927305
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatt 78  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    |||| |||||||||||  ||||| |||||    
T  25927382 accaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgttacttatt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34478545 - 34478596
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttc 53  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||||||||    
T  34478545 accaaataataaagtg-taagtagagtatcgtatccacaaggattgacatttc 34478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18075467 - 18075404
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaat 64  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||| | |||  ||||||||||    
T  18075467 accaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaat 18075404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23232062 - 23231983
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||| ||||| |||||| | | |||| |  ||| ||||||||||| |||||| |||||||    
T  23232062 accaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttatttt 23231983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 24657532 - 24657489
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  24657532 caagtaataaaatgataagtcgagtatcgtatccacagggattg 24657489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19244605 - 19244667
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaa 63  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||| | |||| |||||||||    
T  19244605 accaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaaacaa 19244667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22566241 - 22566203
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  22566241 accaagtaataaagtgataagtagagtatcatatccaca 22566203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 8039210 - 8039088
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaa----a 96  Q
    |||||||||||||||| ||||| |||||||||||       ||||| | |||| ||||||||||| | |||| |||||||| ||||||||| |||    |    
T  8039210 accaagtaataaagtg-taagtggagtatcgtat-------gattgtcgtttcatccaaacaattcgtgttacttattttg-tttgacgatataataata 8039120  T
Q  97 ataaaagagtgaagggttagagattgtaattt 128  Q
    |||||||||| ||||||||||||||| |||||    
T  8039119 ataaaagagttaagggttagagattgcaattt 8039088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 344
Target Start/End: Complemental strand, 8338267 - 8338188
Alignment:
Q  265 aaaggctataaataccacttttgagatcattcttacggcatgacaaaaatagtact-aaccctaatttctaatattgtact 344  Q
    |||||||||||||||| || |||||| |||||| | ||||| |||||||||| ||| |||| || ||||||||||||||||    
T  8338267 aaaggctataaatacccctcttgagaacattctcaaggcatcacaaaaatag-actaaaccttagtttctaatattgtact 8338188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20005958 - 20005914
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||    
T  20005958 accaagtaataaagtgataagcagagtatcgtatctacatggatt 20005914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21932131 - 21932100
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgt 32  Q
    ||||||||||||||||||||||||||||||||    
T  21932131 accaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 22413126 - 22413083
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||    
T  22413126 caagtaataaagttataagtagagtatcgtatctacatggattg 22413083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7543039 - 7543005
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatc 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  7543039 accaagtaataaagtgataagtaaagtatcgtatc 7543005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 17382172 - 17382210
Alignment:
Q  8 aataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  17382172 aataaagtgatgagtagagtatcgtatctacagggattg 17382210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 5624660 - 5624689
Alignment:
Q  1 accaagtaataaagtgataagtagagtatc 30  Q
    ||||||||||||||||||||||||||||||    
T  5624660 accaagtaataaagtgataagtagagtatc 5624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 20145139 - 20145106
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtat 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  20145139 accaagtaataaagtgataagtagagtatggtat 20145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22187700 - 22187733
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtat 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  22187700 accaagtaataaagtgataagtagagtatggtat 22187733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 6630769 - 6630644
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||  | ||||||||||||||| |||||||  ||||| | |||| || ||||   | |||||| ||||||| | ||||| || ||||||||    
T  6630769 accaagtaataa--taataagtagagtatcggatccacatagattgtcgtttcgtctaaaccgcttgcgttacttattttaagttgacaatataaaataa 6630672  T
Q  101 aagagtgaagggttagagattgtaattt 128  Q
    ||||   || |||||||||||| |||||    
T  6630671 aagatataaaggttagagattgcaattt 6630644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14079523 - 14079491
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgta 33  Q
    ||||||| |||||||||||||||||||||||||    
T  14079523 accaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 24123052 - 24123128
Alignment:
Q  268 ggctataaataccacttttgagatcattcttacggcatgacaaaaatagtactaaccctaatttctaatattgtact 344  Q
    ||||||||||||| || ||  ||||||||| | ||||| |||||||||||   |||||||  |||||||||||||||    
T  24123052 ggctataaatacccctcttaggatcattctcaaggcatcacaaaaatagtcaaaaccctagattctaatattgtact 24123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 24281297 - 24281450
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||| |||| |||||||| |||||  | ||| |||| ||||||| |||||| ||||||| | ||||| || ||||||||    
T  24281297 accaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttacttattttaagttgacaatataaaataa 24281396  T
Q  101 aagagtgaagggttagagattgtaatt--tatctgtttgcaacagagaaagtta 152  Q
    |||||| ||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  24281397 aagagtaaagggttagagattgcaatttctatctgtttgaaacagagaaagtta 24281450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 147653 - 147801
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||| |||||| || |||||  | |||||| ||||||| |||||||||| | ||||||||    
T  147653 caagtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttacttattttaatttgacgatat-aaataaaa 147751  T
Q  103 gagtgaagggttagagattgtaa-tttatctgtttgcaacagagaaagtt 151  Q
    |||  ||||||||||||||  || ||||||| |||||||||||| |||||    
T  147752 gagataagggttagagatttcaattttatctatttgcaacagagcaagtt 147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22664226 - 22664341
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||  |||||| || |||||| | |||||  ||||||| | |||||||| ||||||||    
T  22664226 accaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgcttattttaagttgacgatataaaataa 22664325  T
Q  101 aagagtgaagggttag 116  Q
    |||||  |||||||||    
T  22664326 aagagataagggttag 22664341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21666687 - 21666608
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||||||||||  ||||| |||||||    
T  21666687 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttt 21666608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 13345415 - 13345296
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt-tgatttgacgatttaaaata 99  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| | |||  ||||||||||| |||||| |||||| |  ||||||||  |||||||    
T  13345415 accaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacga--taaaata 13345318  T
Q  100 aaagagtgaagggttagagatt 121  Q
    ||||||| || ||||| |||||    
T  13345317 aaagagttaaaggttaaagatt 13345296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 33190699 - 33190850
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    ||||||||||| |||||||||||||||  ||||||||   |||| | |||| || |||||| | | |||| ||||||| | |||||||| ||||||||||    
T  33190699 caagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaactcgtgttacttattttaagttgacgatataaaataaaa 33190798  T
Q  103 gagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
     ||| |||| |||||||||||||  ||||| |||||||||||| | ||||||    
T  33190799 tagttaaggtttagagattgtaatttttatttgtttgcaacagtgcaagtta 33190850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12208621 - 12208700
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||| |||| |||||||| |||||| | |||| ||||||||||| |||||| |||||||    
T  12208621 accaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttatttt 12208700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17610335 - 17610256
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| | |||| |||||||||||  ||||| |||||||    
T  17610335 accaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttatttt 17610256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24306384 - 24306307
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| |||| |||||| ||||||    
T  24306384 accaagtaataaagtgataagtagagtatcgtatccacagggattg-cgtttcaaccaaataattcgcgttacttattt 24306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 18736317 - 18736240
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | |||| | |||||||||  ||||| |||||||    
T  18736317 caagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttatttt 18736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 21334796 - 21334719
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||| ||||||||||||  ||| |||| ||||||||||||||||||  ||||| |||||||    
T  21334796 caagtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttatttt 21334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 29242541 - 29242610
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgtta 72  Q
    ||||||||||||||||||||||||||||||||||| || ||||| | |||| ||||||||||| ||||||    
T  29242541 caagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgtta 29242610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21449109 - 21449173
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | ||||  ||||||||||    
T  21449109 accaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaatt 21449173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 15544045 - 15543966
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||||||||||||||||| |  |||| | |||| ||||||||||| | |||| |||||||    
T  15544045 accaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttatttt 15543966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21988061 - 21987982
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||| |||||||||||||||||||||||||||||| | | ||||| |||||| ||||| ||||| |||||| |||||||    
T  21988061 accaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttatttt 21987982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 25405709 - 25405630
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| | |||| |||||||| ||  ||||| |||||||    
T  25405709 accaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttatttt 25405630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17837537 - 17837615
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||| |||||  || |||||||| |||||| ||||||    
T  17837537 accaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 9787956 - 9787798
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    ||||||||||||||||||||||||||||||||||| |   |||| | |||| || |||||| |    ||| ||||||| | || | ||| ||||||| ||    
T  9787956 caagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaactccaattacttattttaagtttatgatataaaatagaa 9787857  T
Q  103 gagtgaagggttagagattgtaattt--atctgtttgcaacagagaaagttatctgttt 159  Q
    |||  ||||||||||||||| |||||  | ||||||||||||||| |||| | ||||||    
T  9787856 gagaaaagggttagagattgcaattttgaactgtttgcaacagagcaagtgacctgttt 9787798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14779585 - 14779664
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||| | |||| ||||||||  | |||||| |||||||    
T  14779585 accaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttatttt 14779664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 24214564 - 24214691
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||| ||||  ||||||||| ||||||   |||| || |||||| |  ||||| ||||||| | | |||||| ||||||||    
T  24214564 accaagtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttattttaagtggacgatataaaataa 24214663  T
Q  101 aagagtgaagggttagagattgtaattt 128  Q
    |||| | ||||||| || |||| |||||    
T  24214664 aagaattaagggtttgaaattggaattt 24214691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 155
Target Start/End: Complemental strand, 51473950 - 51473799
Alignment:
Q  6 gtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaagag 105  Q
    |||||||||||||||||||||||||||||||| | |||||| | |||  ||||||||||| |||||| || |||| | | ||| |  |||||||||||||    
T  51473950 gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgtttttagtcgacaa--taaaataaaagag 51473853  T
Q  106 -tgaagggttagaga-ttgtaa--tttatctgtttgcaacagagaaagttatct 155  Q
     | || ||||||||| ||| ||  ||||||||||||||||| |  |||||||||    
T  51473852 ttaaaaggttagagatttgcaatttttatctgtttgcaacatatcaagttatct 51473799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 16917011 - 16916933
Alignment:
Q  3 caagtaataaagtga-taagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| | |||| ||| |||||||  ||||| |||||||    
T  16917011 caagtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttatttt 16916933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 16787803 - 16787726
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||||||||||| ||||  ||||| | |||   |||||||||| |||||| |||||||    
T  16787803 caagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttatttt 16787726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 18101019 - 18100939
Alignment:
Q  74 ttattttgatttgacgatttaaaataaaagagtgaagggttagagattgtaattt--atctgtttgcaacagagaaagtta 152  Q
    ||||||| |||||||||| ||||||| |||||| |||||||||| |||| |||||  |||||||||||||| || ||||||    
T  18101019 ttattttaatttgacgatataaaatagaagagttaagggttagaaattgcaatttttatctgtttgcaacatagcaagtta 18100939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 3591730 - 3591654
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||||| ||||||||||||||||||  ||||| | |||  ||||||||||| || ||| ||||||    
T  3591730 caagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaaacaattcgccttacttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22622910 - 22622981
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgtta 72  Q
    |||||||||||||||||| ||||||||||| |||||  |||||||| | |||| |||||| |||| ||||||    
T  22622910 accaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaaaaaattcgcgtta 22622981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23038090 - 23038012
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| | |||| || |||||| |  ||||| |||||||    
T  23038090 accaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttacttatttt 23038012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 727489 - 727531
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  727489 caagtaataaagtgataagtagagtatcgcatccacaaggatt 727531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 9401542 - 9401604
Alignment:
Q  18 taagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||| | |||| | |||| ||||||||||| |||||| |||||||    
T  9401542 taagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttt 9401604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18825675 - 18825713
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  18825675 accaagtaataaagtgataagtaaagtatcgtatccaca 18825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27117797 - 27117720
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatt 78  Q
    ||||||||||||||||||||||||||||| |||| |||| | |||| | ||||  |||||||||  |||||| |||||    
T  27117797 accaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttcaaccaaacaatctgcgttacttatt 27117720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18830501 - 18830565
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||| |||||||||  || | |||||||||||||||||||| | |||| |||||||||||    
T  18830501 accaagtaacaaagtgatacttaaattatcgtatccacagggattgtcctttcgtccaaacaatt 18830565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21847654 - 21847717
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||  |||||||||||| ||||||||| |||||| | |||| |||||||||||    
T  21847654 accaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaatt 21847717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 22620285 - 22620361
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||| |||||||||||||||| ||| |||| | |||| || ||| ||||  ||||| |||||||    
T  22620285 aagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttacttatttt 22620361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26540916 - 26540959
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    |||||||||||||||| |||||||||||||||||||||| |||||    
T  26540916 accaagtaataaagtg-taagtagagtatcgtatccacaaggatt 26540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 28008184 - 28008252
Alignment:
Q  60 acaattagcgttaattattttgatttgacgatttaaaataaaagagtgaagggttagagattgtaattt 128  Q
    |||||| | |||| ||||||| | |||||||| |||||||||||||| |||| |||||||||| |||||    
T  28008184 acaattcgtgttacttattttaagttgacgatataaaataaaagagtaaaggattagagattgcaattt 28008252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17359182 - 17359261
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||| ||||||| |||||| |  ||||| | |||| |||||| ||||  ||||| |||||||    
T  17359182 accaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataattctcgttacttatttt 17359261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 24054001 - 24054043
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  24054001 caagtaataaagtaataagtagagtatc-tatccacagggattg 24054043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44795389 - 44795447
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaa 60  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||| | |||| ||||||    
T  44795389 accaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaaa 44795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 16179029 - 16179063
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatcca 37  Q
    ||||||||||| |||||||||||||||||||||||    
T  16179029 caagtaataaactgataagtagagtatcgtatcca 16179063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 23179819 - 23179897
Alignment:
Q  3 caagtaataaagtga-taagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| | ||| ||||||||| ||||||||||||||| | |||| ||| |||||||  ||||| |||||||    
T  23179819 caagtaataaagttagtaaatagagtatcatatccacagggattgtcctttcgtccgaacaattctcgttatttatttt 23179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 15813228 - 15813144
Alignment:
Q  6 gtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgat 91  Q
    ||||||||||||||||| || ||||||||||||| |||||  | || | ||||||||| |  ||||| ||||||| ||||||||||    
T  15813228 gtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaactctcgttacttattttaatttgacgat 15813144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 15813597 - 15813524
Alignment:
Q  8 aataaagtgataa-gtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| ||||||||| ||||||||| |||||| | ||||||  |||||||| | |||| |||||||    
T  15813597 aataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaattcgtgttacttatttt 15813524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16069630 - 16069585
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||||||||||||| | |||| ||| |||||||||||    
T  16069630 accaagtaataaagtgataagtaaaatatcatatacacagggattg 16069585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 12012877 - 12012841
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||| |||||||||||||||||||| |||||||||    
T  12012877 caagtattaaagtgataagtagagtattgtatccaca 12012841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 14781930 - 14781894
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||  ||||||||||||||||||||||    
T  14781930 caagtaataaagtagtaagtagagtatcgtatccaca 14781894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 23348077 - 23348125
Alignment:
Q  265 aaaggctataaataccacttttgagatcattcttacggcatgacaaaaa 313  Q
    |||||||||||||||| || |||||||| |||| | |||||||||||||    
T  23348077 aaaggctataaatacccctcttgagatcgttctcagggcatgacaaaaa 23348125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 23353337 - 23353385
Alignment:
Q  265 aaaggctataaataccacttttgagatcattcttacggcatgacaaaaa 313  Q
    |||||||||||||||| || ||||||||||||| | ||| |||||||||    
T  23353337 aaaggctataaatacccctcttgagatcattctcagggcgtgacaaaaa 23353385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 5e-32; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 32085483 - 32085636
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| | |||| || |||||  | | |||| ||||||| | |||||||| ||||||||    
T  32085483 accaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgttacttattttaagttgacgatataaaataa 32085582  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||| ||| ||||||||||| ||  |||||||||||||||||||| ||||||    
T  32085583 aagagttaagagttagagattgcaatttttatctgtttgcaacagagcaagtta 32085636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 20174714 - 20174554
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||||||||||||||| | |||||| |||||| | |||| |||||||||||   |||| ||||||| | |||| ||| ||||||||    
T  20174714 accaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttacttattttaagttgatgatataaaataa 20174615  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    || ||| ||||||||||||||| ||  |||||||||||||||||||| || ||| ||||||    
T  20174614 aatagttaagggttagagattggaatttttatctgtttgcaacagagcaaattacctgttt 20174554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 25618576 - 25618727
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| | |||| || |||||||| |||| | ||||||| | |||||||  || |||||    
T  25618576 accaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttatttttagttgacga--tataataa 25618673  T
Q  101 aagagtgaagggttagaga-ttgtaa--tttatctgtttgcaacagagaaagtt 151  Q
    |||||||||  |||||||| ||| ||  ||||||||||||||||||||||||||    
T  25618674 aagagtgaaaagttagagatttgcaatttttatctgtttgcaacagagaaagtt 25618727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 30411698 - 30411777
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||||| |||||| |||||||    
T  30411698 accatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttatttt 30411777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15339258 - 15339338
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttg 81  Q
    ||||||||||||||||| |||||||||||| |||||||| |||||| | |||| |||||||||||||||||| ||| ||||    
T  15339258 accaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttacttactttg 15339338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17743555 - 17743476
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  | |||| ||||||||||| | |||| |||||||    
T  17743555 accaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttatttt 17743476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25196030 - 25196109
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| | |||| |||||||||||  ||||| |||||||    
T  25196030 accaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttatttt 25196109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29719310 - 29719231
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| | |||| | ||||||||| |||||| |||||||    
T  29719310 accaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttacttatttt 29719231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 45621960 - 45621809
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||| | |||| ||||||||||| | |||| |||||||  ||  || |  ||||||||    
T  45621960 accaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttatttt--ttgaacaaaataaaataa 45621863  T
Q  101 aaga-gtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtt 151  Q
    |||| |  ||||||||||| ||||||  ||||||||||||||||| || |||||    
T  45621862 aagatgataagggttagagtttgtaatttttatctgtttgcaacatagcaagtt 45621809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 25535296 - 25535358
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||| ||| |||||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaatt 25535358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 11382826 - 11382679
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga-tttgacgatttaaaataaaagag 105  Q
    |||||||||||||||||||||||| |||||||| | ||||   |||| |||||| |||| |||||| ||||||| | |||||||||  || |||||||||    
T  11382826 taataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttacttatttttagtttgacgat--aagataaaagag 11382729  T
Q  106 tgaagggttagagatt-gtaa--tttatctgtttgcaacagagaaagtta 152  Q
    | ||  |||||||||| | ||  |||||||||||||||||||| ||||||    
T  11382728 ttaaaagttagagatttgcaaattttatctgtttgcaacagagcaagtta 11382679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 25530469 - 25530512
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25530469 caagtaataaagtgataagtagagtatcgtatccacagggattg 25530512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 25885528 - 25885423
Alignment:
Q  12 aagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaagagtgaagg 111  Q
    |||||||||| | ||||||||||||||| | |||| | |||| ||||||||||| | |||| |||||||  |  |||||| |||||||||||||| ||||    
T  25885528 aagtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttattttattccgacgatataaaataaaagagttaagg 25885429  T
Q  112 gttaga 117  Q
    ||||||    
T  25885428 gttaga 25885423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 27418389 - 27418466
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttg 81  Q
    ||||||||||||||||||||||||||| |||||||| |||||  ||||||  |||||||||| | |||| ||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttattttg 27418466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 28606239 - 28606130
Alignment:
Q  19 aagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaagagtgaagggttagag 118  Q
    ||||||||||||||||||||  |||||| | |||| || |||||  | |||||| ||||||| | |||||||| || ||||||||||  |||||||||||    
T  28606239 aagtagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttattttaagttgacgatatataataaaagagacaagggttagag 28606140  T
Q  119 attgtaattt 128  Q
    |||| |||||    
T  28606139 attgcaattt 28606130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 17349377 - 17349456
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttg 81  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||| | |||| |||||||| || |||||| ||||||||    
T  17349377 accaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttattttg 17349456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23011841 - 23011714
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaa-aata 99  Q
    |||||||||||||||| |||||||| ||| ||||||||| |||||| | |||  || |||||||| |||||| |||||| |  | |||||| ||| ||||    
T  23011841 accaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgttatttatttagtctagacgatataataata 23011743  T
Q  100 aaagagtgaagggttagagattgtaattt 128  Q
    ||||||| |||||||||| |||| |||||    
T  23011742 aaagagttaagggttagatattgaaattt 23011714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8503149 - 8503078
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgtta 72  Q
    |||||||||||| ||||||||||||| ||| |||||||| |||||| ||||||  |||||||||| ||||||    
T  8503149 accaagtaataacgtgataagtagaggatcatatccacatggattgtcatttcaaccaaacaatttgcgtta 8503078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27909198 - 27909119
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||||||| || ||    |||| |||||||||||  ||||| |||||||    
T  27909198 accaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttatttt 27909119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 24091003 - 24090941
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||||| |||| ||||||||||||| |||||| | |||| |||||||||||    
T  24091003 caagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaatt 24090941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 25888299 - 25888224
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| | |||    ||||||||| |||||| |||||||    
T  25888299 accaagtaataaagtgataagtacagtatcgtatccacatggattgtcgttt----caaacaattcgcgttacttatttt 25888224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 12953371 - 12953294
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| ||||||||||||| || |||||| |||||| | |||| || |||||||| |||||| |||||||    
T  12953371 caagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttacttatttt 12953294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28770522 - 28770458
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| ||||||||||||||||||||||||||||||| ||| | || | |||| |||||||||||    
T  28770522 accaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaatt 28770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 29027516 - 29027667
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||| |||||||||||| || ||||||| |||| |||| | ||||   |||  | |||| |||| |||||| ||||||| | ||| |||| | ||||||    
T  29027516 accaaataataaagtgatgagcagagtattgtattcacatgaattgttgttttgtgcaaataatttgcgttacttattttaagttgccgatattaaataa 29027615  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagt 150  Q
    |||||  ||||||||||||||| ||  ||||||||||||||| |||| ||||    
T  29027616 aagagataagggttagagattgcaatttttatctgtttgcaagagagcaagt 29027667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31804979 - 31804916
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaat 64  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||| | |||| ||||| ||||    
T  31804979 accaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaat 31804916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9774412 - 9774335
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||| |||||||||||  ||||||||||||||||||| |||||| | |||  ||||| ||||| |||||| |||||||    
T  9774412 accaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttatttt 9774335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 13776365 - 13776420
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaa 63  Q
    |||||||||||||||| ||||||||||||||||  ||||| |||||| |||||||||    
T  13776365 taataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaa 13776420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28925541 - 28925605
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||  | ||||||||  |||||| | |||| |||||||||||    
T  28925541 accaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaatt 28925605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 45553152 - 45553228
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||||||||||| | ||||||||  |||||||||| | |||  ||||| ||||| | |||||||||||    
T  45553152 caagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaattcgtgttaattattt 45553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 26667339 - 26667382
Alignment:
Q  3 caagtaataaagtga-taagtagagtatcgtatccacagggatt 45  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  26667339 caagtaataaagttagtaagtagagtatcgtatccacagggatt 26667382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19200213 - 19200152
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaa 63  Q
    ||||| |||||| ||||||||| |||||||||||||||| |||||| | |||| |||||||||    
T  19200213 accaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaa 19200152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 25920303 - 25920365
Alignment:
Q  18 taagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||| |||||| | |||| ||| |||||||  ||||| |||||||    
T  25920303 taagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttatttt 25920365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8447128 - 8447084
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  8447128 accaagtaataaagt-ataagtagattatcgtatccacatggattg 8447084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 26603427 - 26603350
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||| ||||||||||||||||||||||||  | | |||||| | |||| | |||||||||  ||||| |||||||    
T  26603427 caagtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaattgacgttacttatttt 26603350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 29142983 - 29143060
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||  ||||||||||||| |||||||||| |||||| |  ||| | | ||||||| |||||| |||||||    
T  29142983 caagtaataaaacgataagtagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttatttt 29143060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 344
Target Start/End: Complemental strand, 13312359 - 13312284
Alignment:
Q  268 ggctataaataccacttttgagatcattcttacggcatgacaaaaatagtactaaccctaatttctaatattgtact 344  Q
    ||||||||||||| |||||| ||||||||| | | ||  ||||||| || ||||| |||| ||||||||||||||||    
T  13312359 ggctataaataccccttttgggatcattctcaagacaccacaaaaacag-actaaacctagtttctaatattgtact 13312284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 28699722 - 28699678
Alignment:
Q  268 ggctataaataccacttttgagatcattcttacggcatgacaaaa 312  Q
    ||||||||||||| || ||||||||||||| | ||||||||||||    
T  28699722 ggctataaatacccctcttgagatcattctcaaggcatgacaaaa 28699678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 8e-31; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 22755541 - 22755695
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||| ||| |||||||||||||||||||||| | |||||| | |||||||||||||||| || ||| |||||||  ||| ||||| ||||||||    
T  22755541 accaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcattatttattttagttttacgatataaaataa 22755640  T
Q  101 aagagtgaagggttagagattgtaa---tttatctgtttgcaacagagaaagtta 152  Q
    |||||| ||||||||||||||   |   |||||||||||||||||||| ||||||    
T  22755641 aagagttaagggttagagatttacaatttttatctgtttgcaacagagcaagtta 22755695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 19283934 - 19283769
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||| ||||||||||||||||||||||| ||||||||| | ||| || |||| ||||||||||| || | | ||||||| | |||||||| |||| |||    
T  19283934 accaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatttgcttaacttattttaagttgacgatataaagtaa 19283835  T
Q  101 aagagtgaagggttagagattgtaattt--atctgtttgcaacagagaaagttatctgtttcgttg 164  Q
    |||||| ||||||||||||||  |||||  |||| ||||||| ||||||||||| |||||| ||||    
T  19283834 aagagttaagggttagagattacaattttaatctatttgcaatagagaaagttacctgtttggttg 19283769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 18208324 - 18208162
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaag 103  Q
    ||||||||||||| |||||||||||||||||||||| |||||| | |||| |||||||||||   |||| |||||||| ||||| ||| |||||||||||    
T  18208324 aagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgttacttattttgttttgatgatataaaataaaag 18208226  T
Q  104 agtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgtttcgttgc 165  Q
    ||| ||||||| ||| ||| ||  ||||||||||||||  |||| |||||| |||||| |||||    
T  18208225 agttaagggttggaggttgcaatttttatctgtttgcagtagagcaagttacctgtttggttgc 18208162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 24267033 - 24266890
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaa-aata 99  Q
    |||||||||||||||| |||||||||||||||||||||| |||||  |||||  ||||||||||| | |||| |||||||| ||||||||| ||| ||||    
T  24267033 accaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttattttgttttgacgatataataata 24266935  T
Q  100 aaagagtgaagggttagagattgtaa--tttatctgtttgcaaca 142  Q
    ||||||| |||||||||| |||| ||  |||||||||||| ||||    
T  24266934 aaagagttaagggttagatattgcaatttttatctgtttgtaaca 24266890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 24343664 - 24343521
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaa-aata 99  Q
    |||||||||||||||| |||||||||||||||||||||| |||||  |||||  ||||||||||| | |||| |||||||| ||||||||| ||| ||||    
T  24343664 accaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttattttgttttgacgatataataata 24343566  T
Q  100 aaagagtgaagggttagagattgtaa--tttatctgtttgcaaca 142  Q
    ||||||| |||||||||| |||| ||  |||||||||||| ||||    
T  24343565 aaagagttaagggttagatattgcaatttttatctgtttgtaaca 24343521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 34487658 - 34487804
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaa-aata 99  Q
    |||||||||||||||| |||||||| |||| |||||||| |||||| | |||| || |||||||| |||||| |||||||| ||||||||| ||| ||||    
T  34487658 accaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattttgttttgacgatataataata 34487756  T
Q  100 aaagagtgaagggttagagattgtaa--tttatctgtttgcaacagag 145  Q
    ||| ||  ||||||||||||||| ||  ||||||||||| ||||||||    
T  34487757 aaaaagataagggttagagattgcaatttttatctgttttcaacagag 34487804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25550583 - 25550519
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  25550583 accaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaatt 25550519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 25402415 - 25402297
Alignment:
Q  2 ccaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga-tttgacgatttaaaataa 100  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| | |||| ||| ||  ||| |||||| ||||||| | |||||| |  ||||||||    
T  25402415 ccaagtaaggaagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttattttaagtttgacaa--taaaataa 25402318  T
Q  101 aagagtgaagggttagagatt 121  Q
    |||||||||||||||||||||    
T  25402317 aagagtgaagggttagagatt 25402297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19004305 - 19004226
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| |||||  |||||||||||  ||||| |||||||    
T  19004305 accaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttatttt 19004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24140462 - 24140533
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgtta 72  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||| | |||| ||||||||||| ||||||    
T  24140462 accaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgtta 24140533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24245623 - 24245544
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||| |||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||| | |||||| |||||||    
T  24245623 accatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttatttt 24245544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 17171630 - 17171553
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||| |||||||||||| |||||| | |||| || || ||||| ||||||||||||||    
T  17171630 caagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaattatttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 18937771 - 18937920
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaag 103  Q
    |||||||||||||||||||| |||||||||| || ||||||||   |||| |||||||||||  ||||| ||||||| | || | ||| ||||||||| |    
T  18937771 aagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaattcacgttacttattttaagttaatgatataaaataaa-g 18937868  T
Q  104 agtgaagggtt-agagattgtaattt--atctgtttgcaacagagaaagtta 152  Q
    ||| ||||||| |||||||  |||||  ||||||||||||||||| ||||||    
T  18937869 agttaagggttgagagatttcaatttttatctgtttgcaacagagcaagtta 18937920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23388917 - 23388853
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||| |||||||    
T  23388917 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaatt 23388853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20315509 - 20315430
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||| |||||||||||||||||||||||||| |||||  | |||| ||||||||||| |||| | |||||||    
T  20315509 accaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttatttt 20315430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 17315177 - 17315115
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| | |||||||| |||||||    
T  17315177 caagtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaatt 17315115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17185483 - 17185547
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| | ||||  ||||||||||    
T  17185483 accaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaatt 17185547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34128656 - 34128720
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| | |||| |||||| ||||    
T  34128656 accaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaaaaaatt 34128720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 15375961 - 15375882
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||| ||||||| |||||||||||||||| ||||||||||||||| | |||| |||||| |||| || ||| |||||||    
T  15375961 accaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttatttt 15375882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39434482 - 39434561
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| |||||||||||  |||||||||||| |||||| | |||  ||||||||||| |||||| |||||||    
T  39434482 accaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttatttt 39434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17431903 - 17431965
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaa 63  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||| | |||| |||||||||    
T  17431903 accaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaa 17431965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 15690803 - 15690916
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaagag- 105  Q
    ||||||||||||||||||||||||||||||||  | |||| | |||| ||||| |||||  ||||| ||||||| | ||||| | |  |||||||||||     
T  15690803 taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttacttatttttagttgacaaat--aaataaaagagt 15690900  T
Q  106 tgaagggttagagatt 121  Q
    | ||||||||||||||    
T  15690901 taaagggttagagatt 15690916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24852251 - 24852173
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||||   |||| || ||||||||  ||||| ||||||    
T  24852251 accaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 28664796 - 28664873
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||||||||||| || ||||| || | |||| | | |||||||  ||||| |||||||    
T  28664796 caagtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttatttt 28664873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15469956 - 15470020
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||| || |||||||||||||||| | |||| | |||| || ||||||||    
T  15469956 accaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtctaaacaatt 15470020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 20549766 - 20549719
Alignment:
Q  18 taagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||||| | |||| ||| |||||||    
T  20549766 taagtagagtatcgtatccacagggattgtcctttcgtccgaacaatt 20549719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 20858707 - 20858742
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccac 38  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20858707 caagtaataaaatgataagtagagtatcgtatccac 20858742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24167663 - 24167600
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaat 64  Q
    |||||||||||||||  ||||||||||||| |||  ||| |||||| | |||||||||||||||    
T  24167663 accaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttcttccaaacaat 24167600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19086258 - 19086220
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  19086258 accaagtaataaagtgataagtagagtattatatccaca 19086220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26502139 - 26502188
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatt 51  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||| ||||    
T  26502139 accaagtaataaagtgataagt-gagtgtcgtatccacatggattgtcatt 26502188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 37551390 - 37551427
Alignment:
Q  268 ggctataaataccacttttgagatcattcttacggcat 305  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  37551390 ggctataaataccactattgagatcattcttaaggcat 37551427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 20564158 - 20564114
Alignment:
Q  3 caagtaataaagtga-taagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||    
T  20564158 caagtaataaagttagtaagtagagtatcgtatccacatggattg 20564114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 23265176 - 23265252
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||| ||||||||||||||| | ||||||||||| | |||||  ||||||  ||||||||||  ||||| ||||||    
T  23265176 caagtgataaagtgataagtaaaatatcgtatccatatggattttcatttcaaccaaacaattcacgttacttattt 23265252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28253301 - 28253344
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||    
T  28253301 accaagtaataaagtg-taagtagaatatcgtattcacagggatt 28253344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 43304 - 43146
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaa 102  Q
    ||||||||||||||||||||| |||| |||||||||| |||||| | |||| || |||||  | | |||| ||||||| | |||||||| ||||||||||    
T  43304 caagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattttaaattgacgatataaaataaaa 43205  T
Q  103 gagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |||  ||||||||||||||| ||  |||||||||||||||||||| |||||| ||||||    
T  43204 gagataagggttagagattgcaatttttatctgtttgcaacagagcaagttacctgttt 43146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 25182507 - 25182347
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||| ||||||||||| |||||||||||||||| |||| |||||| |||||| || ||||   | |||||| ||||||| | |||||||| ||||||||    
T  25182507 accaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgcttgcgttacttattttaagttgacgatataaaataa 25182408  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    |||||  ||||||||||||||| ||  ||||||| |||||||||||| |||||| ||||||    
T  25182407 aagagataagggttagagattgcaatttttatctatttgcaacagagcaagttacctgttt 25182347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 30806573 - 30806444
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatcca-----cagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaat 98  Q
    ||||||||||||||||||||||||||||||||||     || |||||| | |||| ||||||||||| |||||| |||||||  ||||||||| ||||||    
T  30806573 aagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaacaatttgcgttacttattttagtttgacgatataaaat 30806474  T
Q  99 aaaagagtgaagggttagagattgtaattt 128  Q
    |||||||| ||||||||||||||| |||||    
T  30806473 aaaagagttaagggttagagattgcaattt 30806444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 14528169 - 14528322
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||| | |||| ||||||||| |  ||||| ||||||| |  ||||||| ||||||||    
T  14528169 accaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttacttattttaaactgacgatataaaataa 14528268  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    || ||| ||||||||||||||| ||  |||| |||||||||||| || ||||||    
T  14528269 aatagttaagggttagagattgcaatttttagctgtttgcaacaaagcaagtta 14528322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29382440 - 29382361
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||||| |||||||    
T  29382440 accaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttacttatttt 29382361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 13697893 - 13698041
Alignment:
Q  19 aagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataaaagagtgaagggttagag 118  Q
    ||||||||||||||||||||| |||||  | |||| |||||||||   |||||| ||||||| | |||||||| ||||||| |||||  |||||||||||    
T  13697893 aagtagagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttattttaagttgacgatataaaatacaagagataagggttagag 13697992  T
Q  119 attgtaa--tttatctgtttgcaacagagaaagttatctgtttcgttgc 165  Q
    |||| ||  ||||||| |||||||||||| |||||| |||||| |||||    
T  13697993 attgcaatttttatctctttgcaacagagcaagttacctgtttggttgc 13698041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34497135 - 34497279
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||| |||||||||||||||||| || || || | |||| ||||||||||   ||||| ||||||| | |||||||| ||||||||    
T  34497135 accaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttacttattttaaattgacgatataaaataa 34497234  T
Q  101 aagag-tgaagggttagagattgtaa--tttatctgtttgcaaca 142  Q
    ||||| | ||||||||||||||| ||  ||||||| |||||||||    
T  34497235 aagagttaaagggttagagattgcaatttttatctttttgcaaca 34497279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 19786751 - 19786904
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||| ||||| |||||| |||||| ||||| || | |||| ||||||||| | | |||| || |||| | |||| ||| ||||||||    
T  19786751 accaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaactcgtgttacttgttttaagttgatgatataaaataa 19786850  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    |||||  ||  ||||||||||||||  |||||||||||||||||||| ||||||    
T  19786851 aagagataaaagttagagattgtaatttttatctgtttgcaacagagcaagtta 19786904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17101972 - 17101909
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaat 64  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||||||||||    
T  17101972 accaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaat 17101909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24114361 - 24114282
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| | |||| ||||||||| | |||||| |||||||    
T  24114361 accaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttacttatttt 24114282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24269618 - 24269681
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||    
T  24269618 accaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaatt 24269681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13315071 - 13314992
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    |||| ||||||||||| |||||| |||||||    
T  13315071 accaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttatttt 13314992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 2637620 - 2637697
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | |||| || |||||| |  ||||| |||||||    
T  2637620 caagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17509266 - 17509330
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||   |||| |||||||||||    
T  17509266 accaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaatt 17509330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5850961 - 5851024
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaat 64  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| | ||||  |||||||||    
T  5850961 accaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaat 5851024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 14075614 - 14075692
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||| | ||||  |||||||||  |||||| ||||||    
T  14075614 accaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttacttattt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 27659468 - 27659526
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaaca 62  Q
    |||||||||||||||||||||||||||||||| ||| |||||| | |||| ||||||||    
T  27659468 aagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaaca 27659526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30783820 - 30783782
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30783820 accaagtaataaagtgataagtagagtatcgtatccaca 30783782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 30122232 - 30122156
Alignment:
Q  2 ccaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||| |||||  ||||||||||| || ||| ||||||    
T  30122232 ccaagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaaacaattcgcattacttattt 30122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 17976641 - 17976677
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccaca 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  17976641 caagtaataaagtgataagtagagtatcgtatccaca 17976677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21314643 - 21314687
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggatt 45  Q
    |||||||||||||||||||||||| |||||||||| |||||||||    
T  21314643 accaagtaataaagtgataagtagtgtatcgtatctacagggatt 21314687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24904653 - 24904717
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||| | |||| || ||||||||    
T  24904653 accaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaatt 24904717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24110734 - 24110696
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  24110734 accaagtaataaaatgataagtagagtatcgtatccaca 24110696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24723520 - 24723482
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccaca 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  24723520 accaagtaataaagtgataagtaaagtatcgtatccaca 24723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26008043 - 26008093
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatt 51  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||| ||||    
T  26008043 accaagtaataaagtgataagtagagtatggtatcaagagggattgtcatt 26008093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15238819 - 15238896
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatt 78  Q
    ||||||||| ||| ||||||||||| ||||||||||||| | |||| | |||| || |||||||| |||||| |||||    
T  15238819 accaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 25226158 - 25226227
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgtta 72  Q
    |||||||||||||||||||| |||||||||||  |||||||||    |||| ||||||||||| ||||||    
T  25226158 caagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaaacaatttgcgtta 25226227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31288378 - 31288454
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatt 78  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||| | ||||  |||||  ||| ||||||||||||    
T  31288378 accaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttcaaccaaatcattcgcgttaattatt 31288454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 6884982 - 6885056
Alignment:
Q  5 agtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    |||||||||||||||||| |||||||||||| ||| |||||| | |||| ||||||||| | ||| || |||||||    
T  6884982 agtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgcgctacttatttt 6885056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24644858 - 24644935
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||  | ||| ||||||| |||| || ||| ||||||    
T  24644858 accaagtaataaagtg-taagtagagtattgtatccacatggattatcgttttttccaaataattcgcattacttattt 24644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 44011099 - 44011058
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  44011099 aagtaataaagtg-taagtagagtatcgtatccacatggattg 44011058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 17972193 - 17972240
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatt 51  Q
    |||||||||||||| ||||||||||||||||||| || |||||| ||||    
T  17972193 caagtaataaagtg-taagtagagtatcgtatccgcatggattgtcatt 17972240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26615321 - 26615285
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatcca 37  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  26615321 accaactaataaagtgataagtagagtattgtatcca 26615285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 748 - 914
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattag-cgttaattattttgatttgacgatttaaaata 99  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||| | |||| ||||||||||  | ||||| ||||||| | |||| ||| |||||||    
T  748 accaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttacttattttaagttgaagatataaaata 847  T
Q  100 aaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgtttcgttg 164  Q
    ||||||| ||||||||||||||  ||  |||| ||||||||||||||| ||| || |||||| ||||    
T  848 aaagagttaagggttagagatttcaatttttacctgtttgcaacagagtaagatacctgtttggttg 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 168377 - 168225
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | ||||||| ||| |  | | |||| ||||||| | |||||||| ||||||||    
T  168377 accaagtaataaagtgataagtagagtatcgtatccaca-ggattgtcgtttcttctaaatagctcgtgttacttattttaagttgacgatataaaataa 168279  T
Q  101 aagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagtta 152  Q
    ||||   ||||||||||||||  ||  |||||||||||||||||||| ||||||    
T  168278 aagacataagggttagagatttcaatttttatctgtttgcaacagagcaagtta 168225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 2881 - 2769
Alignment:
Q  17 ataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaa-aataaaagagtgaagggtta 115  Q
    |||||| |||||||||||||||| | |||| | |||| ||||||||||| | |||| |||||||| |||||| || ||| ||||||||||| ||||||||    
T  2881 ataagttgagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacaatataataataaaagagttaagggtta 2782  T
Q  116 gagattgtaattt 128  Q
    ||||||| |||||    
T  2781 gagattgcaattt 2769  T

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Target: scaffold0024 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 39604 - 39765
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaat-tagcgttaattattttgatttgacgatttaaaata 99  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||   |||  |||||| ||  |  | ||| ||||||| | |||||||| |||||||    
T  39604 accaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcactttacttattttaagttgacgatataaaata 39703  T
Q  100 aaagagtgaagggttagagattgtaattt--atctgtttgcaacagagaaagttatctgttt 159  Q
    ||||||  |||  |||||||||| |||||  ||||||||||||||||| |||||| ||||||    
T  39704 aaagagataagaattagagattgcaatttttatctgtttgcaacagagcaagttacctgttt 39765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 54880 - 55041
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgac-atttcttccaaacaattagcgttaattattttgatttgacgatttaaaata 99  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |  |||| || ||| |  | |||||| ||||||| | || ||||| |||||||    
T  54880 accaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagcttgcgttacttattttaagttaacgatataaaata 54979  T
Q  100 aaagagtgaagggttagagattgtaa--tttatctgtttgcaacagagaaagttatctgttt 159  Q
    ||| ||  ||||||||||||||  ||  ||||| ||||||| ||| || |||||| ||||||    
T  54980 aaaaagataagggttagagattccaatttttatttgtttgcgacatagcaagttacctgttt 55041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 234362 - 234425
Alignment:
Q  2 ccaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||| | |||| ||| |||||||    
T  234362 ccaagtaataaagtgataagtatagtatcgtacccacagagattgtcctttcgtccgaacaatt 234425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 48269 - 48235
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatc 35  Q
    |||||||||||||||||||||||||||||||||||    
T  48269 accaagtaataaagtgataagtagagtatcgtatc 48235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 465 - 404
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||    
T  465 aagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaaacaatt 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 36071 - 35954
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga-tttgacgatttaaaataaaa 102  Q
    |||||||||||||||||||||||||||||||||||| | |||| | |||| |||||| |||| | |||| ||||||| | ||||||||  ||||||| ||    
T  36071 aagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttattttaagtttgacga--taaaatataa 35974  T
Q  103 gag-tgaagggttagagatt 121  Q
    ||| | ||||||||||||||    
T  35973 gagttaaagggttagagatt 35954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3551 - 3615
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||| |||||||    
T  3551 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaatt 3615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 69101 - 69251
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaaaataa 100  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||| || ||  ||||||||||| || ||  ||||||| | ||||| |  || |||||    
T  69101 accaagtaataaagtgataagttgagaatcgtatccacaaggattgtcactttctccaaacaatttgcattgcttatttttagttgacaa--tataataa 69198  T
Q  101 aagagtgaagggttagag-attgtaa--tttatctgtttgcaacagagaaagtt 151  Q
    | |||| |||||||| || |||| ||  ||||||||||||||||||||||||||    
T  69199 acgagt-aagggttatagaattgcaatttttatctgtttgcaacagagaaagtt 69251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 35559 - 35677
Alignment:
Q  3 caagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttga-tttgacgatttaaaataaa 101  Q
    |||||||||||||||||| |||||||| ||||||||| |||||  | |||| ||||||||||| || ||| ||||||| | ||||| ||  |||||||||    
T  35559 caagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagtttgatga--taaaataaa 35656  T
Q  102 agag-tgaagggttagagatt 121  Q
    |||| | ||||||||||||||    
T  35657 agagttaaagggttagagatt 35677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 21299 - 21360
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||| ||| |||||||    
T  21299 aagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaatt 21360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 25009 - 25085
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||| |||| |||||||| ||||||||||| |||||| |||| |  ||| ||||||||||||  |||| |||||||    
T  25009 aagtattaaaatgataagttgagtatcgtatacacaggaattgtctgttcgtccaaacaattattgttacttatttt 25085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 902 - 839
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaat 64  Q
    |||||||||||||||||||||||||||||||||||||  | ||||| | |||| ||||||||||    
T  902 accaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaat 839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 69933 - 70012
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattatttt 80  Q
    ||||||||||||||||| ||||| |||||||||| |||| |||||| | |||| |||||||||||  ||||| |||||||    
T  69933 accaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatttt 70012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1754 - 1799
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  1754 accaagtaaaaaagtgataagtagagtatcgtatccacaggaattg 1799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3173 - 3236
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaatt 65  Q
    |||||||||||||||| || ||||||||||||||||||| |||||| |||||| |||||| ||||    
T  3173 accaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttcatccaaaaaatt 3236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 6310 - 6385
Alignment:
Q  4 aagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||   |||| ||||||||||| || ||| ||||||    
T  6310 aagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaaacaattcgcattacttattt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15544 - 15499
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  15544 accaagtaataaagtaatatgtagagtatcgtatccacatggattg 15499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 114591 - 114653
Alignment:
Q  84 ttgacgatttaaaataaaagagtgaagggttagagattgtaa--tttatctgtttgcaacaga 144  Q
    |||| ||| |||||||||||||  || |||||||||||||||  |||||||||||||||||||    
T  114591 ttgatgatataaaataaaagagacaatggttagagattgtaatttttatctgtttgcaacaga 114653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4562 - 4484
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    ||||||||| ||| || |||| ||||||||||||||||| |||||| |||||| |  |||||||| | |||| ||||||    
T  4562 accaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttacttattt 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 7095 - 7171
Alignment:
Q  268 ggctataaataccacttttgagatcattcttacggcatgacaaaaatagtact-aaccctaatttctaatattgtact 344  Q
    ||||||||||||  || |||||| |||||||| | ||||| |||||||| ||| || |||||||||||||||||||||    
T  7095 ggctataaatacatctcttgagaacattcttaagacatgataaaaatag-actaaatcctaatttctaatattgtact 7171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 72092 - 72125
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtat 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  72092 accaagtaataaagtgataagtagagtatggtat 72125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29927 - 30027
Alignment:
Q  1 accaagtaataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattttgatttgacgatttaa-aata 99  Q
    |||||||||||||||| |||||||||||| ||||||| || ||||| | | |||  |||||||||  ||||| |||||||  ||||||||| ||| ||||    
T  29927 accaagtaataaagtg-taagtagagtatggtatccatagagattgtcgtatctgtcaaacaatttacgttacttatttt--tttgacgatataacaata 30023  T
Q  100 aaag 103  Q
    ||||    
T  30024 aaag 30027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 76439 - 76483
Alignment:
Q  3 caagtaataaagtga-taagtagagtatcgtatccacagggattg 46  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||    
T  76439 caagtaataaagttagtaagtagagtatcatatccacagggattg 76483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 11266 - 11338
Alignment:
Q  7 taataaagtgataagtagagtatcgtatccacagggattgacatttcttccaaacaattagcgttaattattt 79  Q
    |||||||||||||||||||||||| |||| ||| ||||||   ||||  |||||||||| || ||| ||||||    
T  11266 taataaagtgataagtagagtatcatatctacatggattgttgtttcaaccaaacaatttgcattacttattt 11338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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