View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11092_high_14 (Length: 392)

Name: NF11092_high_14
Description: NF11092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11092_high_14
NF11092_high_14
[»] chr1 (45 HSPs)
chr1 (1-379)||(644788-645166)
chr1 (288-376)||(31666093-31666181)
chr1 (288-378)||(46903563-46903654)
chr1 (287-375)||(37741838-37741927)
chr1 (288-365)||(40053013-40053090)
chr1 (289-378)||(27787582-27787672)
chr1 (288-365)||(43757693-43757770)
chr1 (289-365)||(49615163-49615239)
chr1 (289-378)||(2827598-2827688)
chr1 (289-378)||(6396420-6396510)
chr1 (288-378)||(31244622-31244713)
chr1 (289-365)||(21446106-21446182)
chr1 (293-378)||(37947112-37947198)
chr1 (286-378)||(48962079-48962172)
chr1 (288-378)||(8577389-8577480)
chr1 (288-378)||(24158743-24158834)
chr1 (295-365)||(28457241-28457311)
chr1 (293-374)||(11121578-11121659)
chr1 (311-375)||(51436342-51436406)
chr1 (287-378)||(23399875-23399967)
chr1 (293-365)||(43105212-43105284)
chr1 (282-365)||(27954335-27954418)
chr1 (289-375)||(29638811-29638898)
chr1 (288-378)||(41564767-41564858)
chr1 (295-365)||(30596821-30596891)
chr1 (287-365)||(48028633-48028710)
chr1 (297-378)||(44714334-44714418)
chr1 (287-376)||(29094634-29094724)
chr1 (288-348)||(11796428-11796488)
chr1 (287-354)||(8312263-8312330)
chr1 (288-363)||(11897283-11897358)
chr1 (295-346)||(21263149-21263200)
chr1 (305-378)||(835964-836038)
chr1 (305-378)||(30414957-30415031)
chr1 (287-365)||(40239997-40240075)
chr1 (293-378)||(48336347-48336433)
chr1 (288-365)||(19920869-19920946)
chr1 (290-378)||(26760655-26760744)
chr1 (330-378)||(29362621-29362670)
chr1 (330-378)||(33422148-33422197)
chr1 (330-378)||(44112547-44112596)
chr1 (305-376)||(1100312-1100384)
chr1 (330-378)||(27895690-27895738)
chr1 (330-378)||(34395849-34395897)
chr1 (331-378)||(36794708-36794756)
[»] chr3 (51 HSPs)
chr3 (287-379)||(50025571-50025664)
chr3 (288-378)||(2280270-2280361)
chr3 (286-375)||(38471738-38471828)
chr3 (289-378)||(16295557-16295647)
chr3 (289-378)||(33971976-33972066)
chr3 (290-365)||(29533868-29533943)
chr3 (289-365)||(9557820-9557896)
chr3 (287-378)||(14847404-14847496)
chr3 (289-378)||(34208360-34208450)
chr3 (288-378)||(9027706-9027797)
chr3 (289-378)||(1261263-1261353)
chr3 (295-365)||(33074980-33075050)
chr3 (295-365)||(42643344-42643414)
chr3 (289-378)||(43149231-43149321)
chr3 (287-351)||(31763928-31763992)
chr3 (288-378)||(36301097-36301186)
chr3 (292-357)||(47140566-47140631)
chr3 (288-344)||(27276862-27276918)
chr3 (288-378)||(14838932-14839023)
chr3 (288-378)||(48117429-48117520)
chr3 (295-365)||(884644-884714)
chr3 (286-378)||(43894871-43894963)
chr3 (311-378)||(25559797-25559865)
chr3 (288-336)||(52383135-52383183)
chr3 (288-374)||(43220029-43220116)
chr3 (289-378)||(29555729-29555819)
chr3 (114-170)||(39340971-39341024)
chr3 (305-378)||(49361741-49361815)
chr3 (289-378)||(50745642-50745732)
chr3 (305-378)||(51385344-51385418)
chr3 (295-375)||(32151989-32152070)
chr3 (330-378)||(34021392-34021441)
chr3 (286-378)||(47683883-47683976)
chr3 (330-378)||(50879688-50879737)
chr3 (323-378)||(24748692-24748748)
chr3 (285-365)||(29057755-29057835)
chr3 (343-379)||(45528887-45528923)
chr3 (288-363)||(2381551-2381626)
chr3 (288-378)||(2935398-2935489)
chr3 (286-365)||(10565159-10565237)
chr3 (297-379)||(25806420-25806503)
chr3 (288-378)||(29846778-29846869)
chr3 (288-378)||(35368704-35368795)
chr3 (289-356)||(11404842-11404915)
chr3 (325-374)||(21481861-21481911)
chr3 (330-378)||(622388-622437)
chr3 (289-377)||(31300896-31300985)
chr3 (305-365)||(9158940-9159000)
chr3 (289-376)||(26280676-26280764)
chr3 (343-378)||(44334743-44334779)
chr3 (319-378)||(47484372-47484432)
[»] chr6 (14 HSPs)
chr6 (288-379)||(34976709-34976800)
chr6 (295-365)||(3335352-3335422)
chr6 (288-378)||(608548-608639)
chr6 (288-378)||(22422243-22422334)
chr6 (295-379)||(7303999-7304084)
chr6 (285-378)||(9395221-9395315)
chr6 (289-378)||(35050264-35050354)
chr6 (285-365)||(6997434-6997514)
chr6 (287-378)||(10557502-10557594)
chr6 (331-378)||(12151787-12151835)
chr6 (289-365)||(16865636-16865712)
chr6 (330-379)||(3800686-3800736)
chr6 (289-378)||(32135325-32135415)
chr6 (343-378)||(11742926-11742962)
[»] chr7 (30 HSPs)
chr7 (289-378)||(37970026-37970116)
chr7 (288-378)||(2600421-2600512)
chr7 (295-378)||(47379653-47379737)
chr7 (289-378)||(640485-640575)
chr7 (288-378)||(11070321-11070412)
chr7 (295-379)||(28548129-28548214)
chr7 (293-365)||(41458792-41458864)
chr7 (287-379)||(7295559-7295652)
chr7 (300-365)||(33341024-33341089)
chr7 (286-378)||(44185269-44185362)
chr7 (285-365)||(384658-384738)
chr7 (289-378)||(23034201-23034291)
chr7 (289-378)||(45335955-45336046)
chr7 (290-379)||(32315918-32316008)
chr7 (287-378)||(27704528-27704621)
chr7 (331-378)||(35212887-35212935)
chr7 (289-365)||(36108279-36108354)
chr7 (331-377)||(27383844-27383891)
chr7 (324-378)||(44817783-44817838)
chr7 (288-378)||(47945076-47945167)
chr7 (288-378)||(47950506-47950597)
chr7 (289-378)||(1709377-1709467)
chr7 (289-378)||(24380609-24380699)
chr7 (289-378)||(29923764-29923853)
chr7 (289-378)||(41910073-41910163)
chr7 (289-378)||(48639273-48639363)
chr7 (330-378)||(48522249-48522298)
chr7 (289-341)||(27943088-27943140)
chr7 (291-378)||(38197754-38197842)
chr7 (343-378)||(40693470-40693506)
[»] chr8 (38 HSPs)
chr8 (295-378)||(38939086-38939169)
chr8 (289-365)||(28156310-28156386)
chr8 (288-378)||(5742544-5742635)
chr8 (292-379)||(42651012-42651100)
chr8 (288-378)||(45405722-45405813)
chr8 (295-377)||(33635669-33635752)
chr8 (290-365)||(34578226-34578301)
chr8 (288-378)||(32674119-32674210)
chr8 (285-365)||(33692828-33692908)
chr8 (288-378)||(18550072-18550163)
chr8 (288-378)||(28713186-28713277)
chr8 (288-378)||(28720533-28720624)
chr8 (288-378)||(28728175-28728266)
chr8 (285-378)||(8233380-8233474)
chr8 (289-365)||(14233532-14233608)
chr8 (287-378)||(25430739-25430831)
chr8 (288-378)||(22836026-22836117)
chr8 (288-378)||(23709069-23709160)
chr8 (288-378)||(41776268-41776359)
chr8 (289-376)||(13924104-13924192)
chr8 (290-353)||(34883283-34883346)
chr8 (288-378)||(37471736-37471827)
chr8 (288-378)||(43590787-43590878)
chr8 (285-378)||(1422586-1422680)
chr8 (287-365)||(23265239-23265317)
chr8 (287-365)||(32777990-32778067)
chr8 (289-378)||(34247867-34247957)
chr8 (288-365)||(21649057-21649134)
chr8 (295-378)||(34838164-34838248)
chr8 (287-378)||(44001149-44001241)
chr8 (288-374)||(33511698-33511785)
chr8 (330-379)||(29910141-29910191)
chr8 (288-365)||(22203102-22203179)
chr8 (330-378)||(32185595-32185644)
chr8 (330-378)||(41304911-41304960)
chr8 (295-378)||(27300439-27300523)
chr8 (286-322)||(30462635-30462671)
chr8 (325-365)||(40459688-40459728)
[»] chr2 (47 HSPs)
chr2 (289-379)||(1151621-1151712)
chr2 (288-376)||(34373103-34373192)
chr2 (295-376)||(25094447-25094529)
chr2 (289-378)||(43026029-43026119)
chr2 (287-379)||(35518367-35518460)
chr2 (288-365)||(40721878-40721955)
chr2 (288-378)||(38724204-38724295)
chr2 (290-365)||(9377647-9377722)
chr2 (295-365)||(13850078-13850148)
chr2 (295-365)||(37827679-37827749)
chr2 (290-378)||(4858206-4858295)
chr2 (286-378)||(8757637-8757730)
chr2 (295-378)||(304886-304970)
chr2 (289-365)||(27328997-27329073)
chr2 (289-378)||(30340086-30340177)
chr2 (289-378)||(11728009-11728099)
chr2 (285-351)||(24727523-24727589)
chr2 (289-365)||(23141461-23141537)
chr2 (289-365)||(23553251-23553327)
chr2 (289-378)||(19523289-19523379)
chr2 (286-376)||(16463387-16463478)
chr2 (289-378)||(12256994-12257084)
chr2 (289-378)||(34141536-34141626)
chr2 (288-376)||(28679223-28679311)
chr2 (289-376)||(37076748-37076836)
chr2 (289-365)||(43205200-43205276)
chr2 (288-378)||(11828707-11828798)
chr2 (288-378)||(21805674-21805764)
chr2 (288-378)||(35705804-35705895)
chr2 (288-378)||(45202019-45202110)
chr2 (285-378)||(22296013-22296107)
chr2 (289-378)||(41156891-41156981)
chr2 (288-365)||(35203636-35203713)
chr2 (288-365)||(37064165-37064242)
chr2 (286-378)||(38027500-38027593)
chr2 (312-365)||(38533109-38533162)
chr2 (332-379)||(4432419-4432467)
chr2 (288-364)||(35007988-35008064)
chr2 (330-378)||(546314-546363)
chr2 (330-378)||(7497920-7497969)
chr2 (305-350)||(33569690-33569735)
chr2 (337-378)||(34144488-34144529)
chr2 (330-378)||(36909772-36909821)
chr2 (288-357)||(40115630-40115699)
chr2 (330-378)||(44484585-44484634)
chr2 (289-365)||(13881202-13881278)
chr2 (289-365)||(14021327-14021403)
[»] chr5 (29 HSPs)
chr5 (289-378)||(3518276-3518366)
chr5 (289-378)||(10469835-10469925)
chr5 (288-379)||(1108090-1108186)
chr5 (289-378)||(35358823-35358913)
chr5 (290-378)||(8442252-8442341)
chr5 (287-378)||(29765924-29766016)
chr5 (290-378)||(31625965-31626054)
chr5 (311-378)||(5005206-5005274)
chr5 (285-365)||(8761754-8761834)
chr5 (290-365)||(12612906-12612981)
chr5 (292-378)||(43152951-43153038)
chr5 (289-378)||(35616689-35616779)
chr5 (288-365)||(9940161-9940238)
chr5 (288-365)||(17574111-17574188)
chr5 (288-376)||(37821028-37821117)
chr5 (289-378)||(39032492-39032582)
chr5 (288-365)||(35924377-35924454)
chr5 (296-365)||(38919953-38920022)
chr5 (289-376)||(12203240-12203328)
chr5 (325-379)||(5043017-5043072)
chr5 (289-378)||(6458860-6458950)
chr5 (286-376)||(11306791-11306881)
chr5 (292-351)||(22864270-22864329)
chr5 (295-358)||(34698890-34698952)
chr5 (305-378)||(4173028-4173102)
chr5 (292-365)||(2863656-2863728)
chr5 (330-378)||(30574306-30574355)
chr5 (330-378)||(42825207-42825256)
chr5 (285-365)||(18729161-18729241)
[»] chr4 (45 HSPs)
chr4 (288-378)||(46309010-46309101)
chr4 (287-378)||(4949120-4949212)
chr4 (295-378)||(34538023-34538107)
chr4 (289-378)||(1987601-1987691)
chr4 (285-378)||(9827869-9827963)
chr4 (288-378)||(46799849-46799939)
chr4 (295-379)||(6093499-6093584)
chr4 (286-378)||(30250183-30250276)
chr4 (286-365)||(37732056-37732135)
chr4 (289-378)||(26442276-26442366)
chr4 (289-378)||(36946980-36947070)
chr4 (289-378)||(45678356-45678446)
chr4 (305-378)||(54801391-54801465)
chr4 (292-365)||(33777001-33777074)
chr4 (289-378)||(29577324-29577414)
chr4 (295-375)||(31318844-31318925)
chr4 (288-379)||(8614274-8614366)
chr4 (288-378)||(36110227-36110318)
chr4 (288-378)||(50291375-50291466)
chr4 (326-365)||(54803255-54803294)
chr4 (288-377)||(3475962-3476052)
chr4 (293-378)||(43982990-43983076)
chr4 (305-378)||(46355195-46355269)
chr4 (285-378)||(46791875-46791969)
chr4 (288-365)||(4878074-4878151)
chr4 (288-365)||(8487742-8487819)
chr4 (288-365)||(29863658-29863735)
chr4 (288-365)||(55960807-55960884)
chr4 (285-365)||(18944392-18944472)
chr4 (289-365)||(31413674-31413750)
chr4 (288-379)||(32294639-32294731)
chr4 (289-341)||(46686356-46686408)
chr4 (287-378)||(53781723-53781815)
chr4 (288-378)||(32574370-32574461)
chr4 (289-378)||(22893961-22894051)
chr4 (289-378)||(22945629-22945719)
chr4 (289-378)||(38960548-38960638)
chr4 (289-378)||(46844129-46844219)
chr4 (330-378)||(8026693-8026742)
chr4 (305-377)||(37775331-37775404)
chr4 (330-378)||(41495106-41495155)
chr4 (295-378)||(19807312-19807396)
chr4 (295-378)||(21766640-21766724)
chr4 (329-365)||(33593288-33593324)
chr4 (331-378)||(48650186-48650234)
[»] scaffold0592 (1 HSPs)
scaffold0592 (286-378)||(1003-1097)
[»] scaffold0036 (1 HSPs)
scaffold0036 (295-365)||(54556-54626)
[»] scaffold0542 (1 HSPs)
scaffold0542 (295-378)||(2935-3018)
[»] scaffold0024 (1 HSPs)
scaffold0024 (288-378)||(48747-48838)
[»] scaffold0014 (1 HSPs)
scaffold0014 (289-378)||(145140-145230)
[»] scaffold0651 (1 HSPs)
scaffold0651 (295-375)||(4745-4826)
[»] scaffold0058 (1 HSPs)
scaffold0058 (292-378)||(3036-3123)
[»] scaffold0154 (1 HSPs)
scaffold0154 (343-378)||(4408-4443)
[»] scaffold0514 (1 HSPs)
scaffold0514 (330-378)||(1425-1474)
[»] scaffold0111 (1 HSPs)
scaffold0111 (330-378)||(36797-36846)


Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 379
Target Start/End: Complemental strand, 645166 - 644788
Alignment:
Q  1 gaaaactgagaagtaacacgtggaagagagaatacgacaattaacatgaagtac---tggcttaagtgtttgacctcttaggatatgttattgatnnnnn 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||         
T  645166 gaaaactgagaagtaacacgtggaagagagaatacgacaattaacatgaagtacaagtggcttaagtgtttgacctcttaggatatgttattgataaaaa 645067  T
Q  98 nntattagagttaaataatatgtttttaatccctctaaaattacaacaagctttcaagtttagtatctacaaatgagttgtagatgaaagtgagttgag- 196  Q
       |||||||||||||| |||||||||||||| | |||||||||||   | |||||| |||||| | |||||||||| || ||||||||||||||||||     
T  645066 ag-attagagttaaatactatgtttttaatcc-tataaaattacaa---gttttcaaatttagtctttacaaatgagctgcagatgaaagtgagttgagg 644972  T
Q  197 aggaatgctatcaatatacttttcaacactcttttttattagttaaaatttatattaatcgcatcaaattatgtgggtccggtacaaatttagagtaatg 296  Q
    |||||||||| ||||||| ||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||| || |||||||||||| ||    
T  644971 aggaatgctaacaatataattttcaacactctttttgattaattaaaatttacattagtcgcatcaaattatgtgggtccgatataaatttagagtagtg 644872  T
Q  297 atattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  644871 atattttgacaaccattttggtacaacatttgagacaactttattgttctctcttctcattagtcaaaaacaatagagagagag 644788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 288 - 376
Target Start/End: Original strand, 31666093 - 31666181
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaacaatagagaga 376  Q
    |||||| | ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31666093 agagtagtaatattttgacaaccattttggtacaatctttgagacaactttgttgttctctcttctcattggtcaaaacaatagagaga 31666181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 46903654 - 46903563
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46903654 agagtagtgatattttaacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatagagagaga 46903563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 375
Target Start/End: Original strand, 37741838 - 37741927
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagag 375  Q
    ||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  37741838 tagagtagtgatattttgacaaccattttgatacaatttttgagacaactttgttgttctctcttctcattggttaaaaacaatagagag 37741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 40053090 - 40053013
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  40053090 agagtagtgatattttaacaactattttggtacaatctttgagacaactttgttgttctctcttttcattggtcaaaa 40053013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 27787672 - 27787582
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||| ||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  27787672 gagtagtgatagtttgacaaccattttggtacaacttttgagacaactttgttgttctctcttctcatttgtcaaaaacaatagagagaga 27787582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 43757770 - 43757693
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| ||||    
T  43757770 agagtagtgatattttgacaactattttggtataatttttgagacaactttgttgttctctcttttcattggttaaaa 43757693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 49615163 - 49615239
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  49615163 gagtagtgatattttgacaaccattttggtacaatctttgagacaactttattgttctcttttctcattggtcaaaa 49615239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 2827598 - 2827688
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||||| ||| ||||||||||||  |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  2827598 gagtagtgatattttgataaccattttggtacaacctttgagacaattttgttgttctctcttcttattggtcaaaaacaatagagagaga 2827688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 6396510 - 6396420
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||| |||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  6396510 gagtagtgatgttttgacaatcattttggtacaacatttgagacaactttgttgttctctcttctcattggttaaaaacaatagaaagaga 6396420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 31244622 - 31244713
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||| ||||||||||  |||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||| |||||||| ||||||||    
T  31244622 agagcaatgatatttgaacaactattttggtacaacatttgggacaaccatgttgttctctcttctcattggtcaaaaacaatggagagaga 31244713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 21446106 - 21446182
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| ||||||||||| ||| ||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||    
T  21446106 gagtagtgatattttgataaccattttggtacaacctttgagacaactttgttgatctctcttctcattggttaaaa 21446182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 37947112 - 37947198
Alignment:
Q  293 aatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||  |||||||||||| |||||  |||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  37947112 aatgatatttgaacaactattttgttacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaatggagagaga 37947198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 378
Target Start/End: Complemental strand, 48962172 - 48962079
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||| ||||||||  |||||| |||||||||||| |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  48962172 ttagagtattgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 48962079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 8577389 - 8577480
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||| ||||||||||  ||||||||||||||| ||  |||| |||||| |||||||||||| |||||||||||| |||||||| ||||||||    
T  8577389 agagcaatgatatttgaacaactattttggtataacttttgggacaaccttgttgttctctattctcattggtcaaaaacaatggagagaga 8577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 24158834 - 24158743
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||| ||||||||||||||| |||| || ||||  |||||||||||||||||||||| |||||| ||||||  ||||||||| |||||||    
T  24158834 agagtagtgatattttgacaaccatttaggaacaacctttgagacaactttgttgttctgtcttcttattggtaaaaaacaataaagagaga 24158743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 28457241 - 28457311
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| ||||| ||||||||||||  |||||||||||||| ||||||||| || |||||||||||||    
T  28457241 tgatattttaacaaccattttggtacaacctttgagacaactttattgttctctattttcattggtcaaaa 28457311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 11121659 - 11121578
Alignment:
Q  293 aatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaacaatagaga 374  Q
    ||||||||||  ||||||||||||||| ||  |||| |||||  |||||||| ||||||||||||||| |||||||||||||    
T  11121659 aatgatatttgaacaactattttggtataacttttgtgacaatcttgttgttgtctcttctcattggttaaaacaatagaga 11121578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 51436342 - 51436406
Alignment:
Q  311 attttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagag 375  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  51436342 attttggtacact-tttgagacaactttgttgttctctcttctcattggttaaaaacaatagagag 51436406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 23399875 - 23399967
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||| ||||||||  |||||| |||||||||||| |||| |||||| |||||||  |||||||| ||||||| ||||||||||| |||||    
T  23399875 tagagtagtgatatttaaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagaaagaga 23399967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 43105284 - 43105212
Alignment:
Q  293 aatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||  |||| |||||||||||||| |||| ||||||||| |||||||||||| | |||||||||||    
T  43105284 aatgatatttgaacaattattttggtacaatttttgggacaactttattgttctctctttttattggtcaaaa 43105212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 27954418 - 27954335
Alignment:
Q  282 aaatttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| |||||| ||||||||  |||| | |||| | ||||| ||||  |||||||||||||||||||||||||||||||||||    
T  27954418 aaattaagagtagtgatatttgaacaattcttttagcacaatttttggaacaactttgttgttctctcttctcattggtcaaaa 27954335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 375
Target Start/End: Complemental strand, 29638898 - 29638811
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagag 375  Q
    ||||| ||||||||  |||||| |||||||||||| |||| ||||| ||||||||  |||||||| ||||||| ||||||||||||||    
T  29638898 gagtagtgatatttgaacaactcttttggtacaatttttgggacaattttgttgtgttctcttcttattggtcaaaaacaatagagag 29638811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 41564767 - 41564858
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||  |||||| |||||||||||| |||| |||||| |||||||  |||||||| ||||||| ||||||||| |||||||    
T  41564767 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatacagagaga 41564858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 30596891 - 30596821
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||  ||| ||||||||||||||  |||||||||||||| ||||||| |||| |||||||||||||    
T  30596891 tgatatttgaacagctattttggtacaacctttgagacaactttattgttctttcttttcattggtcaaaa 30596821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 365
Target Start/End: Complemental strand, 48028710 - 48028633
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||  |||| ||||||| | |||| ||||  |||||||||||||||||||||||||||||| ||||    
T  48028710 tagagtaatgatatttgaacaattattttgat-caatttttggtacaactttgttgttctctcttctcattggttaaaa 48028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 378
Target Start/End: Complemental strand, 44714418 - 44714334
Alignment:
Q  297 atattttgacaactattttggtacaatatttgagacaactttg--ttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||| ||||  ||||||||||||  |||||||||||||||  |||||||||||| | ||||||| |||||||||||||||||    
T  44714418 atattttaacaatcattttggtacaacctttgagacaactttgttttgttctctctttttattggtcaaaaacaatagagagaga 44714334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 376
Target Start/End: Original strand, 29094634 - 29094724
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagaga 376  Q
    ||||||||||||||||  |||||| ||||| |||||  |||| |||||| || ||||  |||||||| ||||||||||| |||||||||||    
T  29094634 tagagtaatgatatttgaacaactcttttgatacaacttttgggacaaccttattgtgttctcttcttattggtcaaaatcaatagagaga 29094724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 348
Target Start/End: Complemental strand, 11796488 - 11796428
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctct 348  Q
    |||||| |||||||||||||||||||||  |||||| ||| ||| | ||||||||||||||    
T  11796488 agagtattgatattttgacaactatttttatacaatctttaagatagctttgttgttctct 11796428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 8312330 - 8312263
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctc 354  Q
    ||||||| ||||||||||||||| |||||| || ||  | |||||||||||||||||| ||| |||||    
T  8312330 tagagtagtgatattttgacaaccattttgatataacctctgagacaactttgttgttttctattctc 8312263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 363
Target Start/End: Complemental strand, 11897358 - 11897283
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa 363  Q
    |||||||||||||||  |||||| ||||| |||||| |||| |||||| ||| | ||||| ||||| |||||||||    
T  11897358 agagtaatgatatttgaacaactcttttgttacaatttttgtgacaaccttgatattctcccttcttattggtcaa 11897283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 21263200 - 21263149
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttct 346  Q
    ||||||||  ||||||||||| ||||||| ||||||||||| ||||||||||    
T  21263200 tgatatttgaacaactatttttgtacaatttttgagacaaccttgttgttct 21263149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 836038 - 835964
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagaga 378  Q
    |||||| |||||||||||  |||| |||||  ||||| || |||||||||||||||||| || ||||||||||||    
T  836038 acaactcttttggtacaacttttgggacaatcttgttattttctcttctcattggtcaataataatagagagaga 835964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 30415031 - 30414957
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| |||||||||||  |||| |||||  |||||||  |||||||| ||||||| |||||||||||||||||    
T  30415031 acaactcttttggtacaacttttgggacaatcttgttgtgttctcttcttattggtcaaaaacaatagagagaga 30414957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 40239997 - 40240075
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| ||||||  |||||| ||||| |||||  |||| |||||| ||||||| || |||| |||||||||||||    
T  40239997 tagagtaataatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctatcttttcattggtcaaaa 40240075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 48336347 - 48336433
Alignment:
Q  293 aatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaa-acaatagagagaga 378  Q
    ||||||||||  |||||||||||| |||||  |||  |||||| ||| ||||||| ||||| |||||||||| ||||| ||||||||    
T  48336347 aatgatatttgaacaactattttgttacaactttttggacaaccttgatgttctcccttcttattggtcaaacacaatggagagaga 48336433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 19920946 - 19920869
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||| ||||||||||||||| | ||||  | ||||  || | |||||||||||| ||||||||||| |||||||||||    
T  19920946 agagcaatgatattttgacatccatttaaggacaactttggtgacaactttgtttttctctcttcttattggtcaaaa 19920869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 378
Target Start/End: Complemental strand, 26760744 - 26760655
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||| |||||  |||||| ||||| || ||  ||||||||||| ||||||| ||||||| | ||||||| |||||||| ||||||||    
T  26760744 agtaatgttatttaaacaacttttttgttataacttttgagacaaccttgttgtgctctctttttattggtcaaaaacaatggagagaga 26760655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 29362621 - 29362670
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  29362621 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagaga 29362670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 33422148 - 33422197
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||||||    
T  33422148 gacaacttttattttctctcttctcattggtccaaaacaatagagagaga 33422197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 44112596 - 44112547
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||||||    
T  44112596 gacaacttttattttctctcttctcattggtccaaaacaatagagagaga 44112547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 1100384 - 1100312
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagaga 376  Q
    |||||| |||| ||||||  |||| |||||| ||||| |||| |||||||||||||||| |||||| ||||||    
T  1100384 acaactcttttagtacaacttttgtgacaaccttgttattctttcttctcattggtcaataacaattgagaga 1100312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 27895690 - 27895738
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtcaaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| |||||| |||| ||| ||||||||    
T  27895690 gacaactttgtttttctctcttcttattggttaaaaaaatggagagaga 27895738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 34395849 - 34395897
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtcaaaacaatagagagaga 378  Q
    ||||||||||||  ||||| |||| ||||||||||||||| ||||||||    
T  34395849 gacaactttgtttctctcttttctaattggtcaaaacaatggagagaga 34395897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 378
Target Start/End: Complemental strand, 36794756 - 36794708
Alignment:
Q  331 acaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||| ||||||||| || |||||| |||||||||||||||||    
T  36794756 acaactttgttattctctcttttcgttggtcaaaaacaatagagagaga 36794708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 287 - 379
Target Start/End: Original strand, 50025571 - 50025664
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    ||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50025571 tagagtaatgatattttcacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatagagagagag 50025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 2280361 - 2280270
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  2280361 agagtagtgatattttgacaaccattttggtacaatctttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagagaga 2280270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 38471828 - 38471738
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagag 375  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  38471828 ttagagtagtgatattttgacaattattttggtacaatctttgagacaactttgttgttctctcttctcattggttaaaaacaatagagag 38471738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 16295647 - 16295557
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  16295647 gagtagtgatattttgacaactattttggtacaacttttgagacaactttgttgttctctctttttattggtcaaaaacaatagagagaga 16295557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 33972066 - 33971976
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||    
T  33972066 gagtaatgatatttgaacaactattttggtacaatttttgagacaaccttgttgttctctcttctcattggttaaaaacaatggagagaga 33971976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 29533943 - 29533868
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||| ||||||||||||||  ||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  29533943 agtagtgatattttgacaatcattttggtacaacttttgagacaactttgttgttctctcttctcattggtcaaaa 29533868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 9557820 - 9557896
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||| ||||||||||||||||||||||||| ||||    
T  9557820 gagtagtgatattttgacaattattttggtacaacttttgagacaattttgttgttctctcttctcattggttaaaa 9557896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 14847404 - 14847496
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||||| ||||||||||||||| ||||||||||||  ||| |||||||||||||||||| |||||||||||| | ||||||||||| |||||    
T  14847404 tagagtagtgatattttgacaaccattttggtacaaccttttagacaactttgttgttctatcttctcattggttaaaaacaatagaaagaga 14847496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 34208450 - 34208360
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattg-gtcaaaacaatagagagaga 378  Q
    ||||| |||||||||||||| ||||||  |||||| ||||||||||||||||| ||||||||||||||||  | |||||||||||||||||    
T  34208450 gagtagtgatattttgacaattattttaatacaatttttgagacaactttgtttttctctcttctcattgattaaaaacaatagagagaga 34208360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 9027797 - 9027706
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  ||||||||||||||||||  ||||  ||||| ||||||||||||||||| ||||||| |||||||| ||||||||    
T  9027797 agagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatggagagaga 9027706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 1261263 - 1261353
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||| ||||||||||||||| || ||| |||||| ||| |||||||||||||||| |||||||||||||| | ||||||||||| |||||    
T  1261263 gagtagtgatattttgacaaccatgttgatacaattttttagacaactttgttgttttctcttctcattggttaaaaacaatagatagaga 1261353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 33075050 - 33074980
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||||| || | |||||||||||    
T  33075050 tgatattttgacaactattttagtacaacctttgagacaactttgttgttctctttttttattggtcaaaa 33074980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 42643414 - 42643344
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||| |||||| || ||| |||||||||| |||||||||||||||||||||| |||||||    
T  42643414 tgatattttgacaaccattttgatataatttttgagacaattttgttgttctctcttctcatttgtcaaaa 42643344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 43149231 - 43149321
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  ||||||||||||||||||  ||||  ||||| ||||||||||||||||| ||||||| |||||||| ||||||||    
T  43149231 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatggagagaga 43149321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 31763992 - 31763928
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctctt 351  Q
    ||||||||||||||||  ||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  31763992 tagagtaatgatatttaaacaactattttggtacaatttttgggacaattttgttgttctctctt 31763928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 36301097 - 36301186
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    |||||| ||||||||||||||  |||||||||  | |||||||| ||||||||||||||||||||||||||| | ||||||||||| |||||    
T  36301097 agagtagtgatattttgacaatcattttggta--acatttgagataactttgttgttctctcttctcattggttaaaaacaatagaaagaga 36301186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 357
Target Start/End: Original strand, 47140566 - 47140631
Alignment:
Q  292 taatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcatt 357  Q
    |||||||||||||| ||| ||||||||||||  |||||||||||||||||||||||| || |||||    
T  47140566 taatgatattttgagaaccattttggtacaacttttgagacaactttgttgttctctattttcatt 47140631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 27276918 - 27276862
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgtt 344  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||    
T  27276918 agagtaatgatatttgaacaactattttggtacaatttttgagacaaccttgttgtt 27276862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 14838932 - 14839023
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||  |||||| |||||||||||| |||| |||||| |||||||  |||||| | ||||||| |||||||||||||||||    
T  14838932 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctctttttattggtcaaaaacaatagagagaga 14839023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 48117520 - 48117429
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||| |||||  |||| |||||| ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  48117520 agagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaatggagagaga 48117429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 884714 - 884644
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| ||||||||||||||| ||| ||||||| || ||||||||| |||||||| |||| ||||||    
T  884714 tgatattttaacaactattttggtataatttttgagagaattttgttgttttctcttcttattgatcaaaa 884644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 378
Target Start/End: Original strand, 43894871 - 43894963
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||| |||||||  |||||| ||||| || ||| |||| |||||||||||||| ||||||| ||||||||| ||||||||||| |||||    
T  43894871 ttagagtaa-gatatttgaacaacttttttgctataatttttgggacaactttgttgtgctctcttttcattggtcaaaaacaatagatagaga 43894963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 25559865 - 25559797
Alignment:
Q  311 attttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| |||||  |||||||||| ||| ||||||||||||||||||| || |||||||||||||||||    
T  25559865 attttgatacaacctttgagacaattttattgttctctcttctcattgatcaaaaacaatagagagaga 25559797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 52383183 - 52383135
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaact 336  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  52383183 agagtagtgatattttgacaactattttggtacaatctttgagataact 52383135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 43220029 - 43220116
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagaga 374  Q
    |||||| ||||||||  |||||| |||| ||| ||  |||| ||||| ||||||||||||| |||||||||||||||| |||||||||    
T  43220029 agagtagtgatatttgaacaacttttttagtataacttttgggacaattttgttgttctctattctcattggtcaaaagcaatagaga 43220116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 29555729 - 29555819
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||  |||| |||||| |||||||  |||||||| ||| ||| |||||||||||||||||    
T  29555729 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattagtcaaaaacaatagagagaga 29555819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 39341024 - 39340971
Alignment:
Q  114 aatatgtttttaatccctctaaaattacaacaagctttcaagtttagtatctacaaa 170  Q
    |||||||||||||||||| |||||||   ||||||||||||||||||| ||||||||    
T  39341024 aatatgtttttaatccctataaaatt---acaagctttcaagtttagtctctacaaa 39340971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 49361741 - 49361815
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagaga 378  Q
    |||||| |||| ||||||  |||| |||||||||||| |||| |||||||||||||||| |||||| ||||||||    
T  49361741 acaactcttttagtacaacttttgtgacaactttgttattctttcttctcattggtcaataacaatggagagaga 49361815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 50745732 - 50745642
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  |||| | ||||| || ||| |||| |||||| ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  50745732 gagtaatgatatttgaacaatttttttgctataatttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaatggagagaga 50745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 51385344 - 51385418
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||| ||||||  |||| ||||||  |||||||||||||| ||||||||| |||||||| ||||||||    
T  51385344 acaactattttagtacaacttttgggacaaccatgttgttctctcttttcattggtcaaaaacaatggagagaga 51385418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 375
Target Start/End: Complemental strand, 32152070 - 32151989
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagag 375  Q
    ||||||||  |||||| |||||||||||| |||  ||||||||||||||  |||||||| ||||| | ||||||||||||||    
T  32152070 tgatatttgaacaacttttttggtacaatttttaggacaactttgttgtgttctcttcttattggttaaaaacaatagagag 32151989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 34021392 - 34021441
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  34021392 gacaactttgtttttctctcttcttattggtcaaaaacaatagagagaga 34021441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 378
Target Start/End: Complemental strand, 47683976 - 47683883
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||||  ||||| ||||||  ||||  ||||||||||| || |  ||||||||||| ||||||| |||||| ||||||||||    
T  47683976 ttagagtaatgatatttgtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattggtcaaaaacattagagagaga 47683883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 50879737 - 50879688
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtcaaa-acaatagagagaga 378  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  50879737 gacaactttgttgttctctcttcttattggtcaaacacaatggagagaga 50879688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 24748748 - 24748692
Alignment:
Q  323 tatttgagacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    ||||||||||||||||  | |||||||||||||||||| ||||| ||||||||||||    
T  24748748 tatttgagacaactttcattttctctcttctcattggtccaaaataatagagagaga 24748692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 29057835 - 29057755
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||||  |||| | ||||| |||||  |||| |||||| ||||||| ||||||| |||||||| ||||    
T  29057835 tttagagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggttaaaa 29057755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 379
Target Start/End: Original strand, 45528887 - 45528923
Alignment:
Q  343 ttctctcttctcattggtcaaaacaatagagagagag 379  Q
    ||||||||||||||||||||||||||| |||||||||    
T  45528887 ttctctcttctcattggtcaaaacaatggagagagag 45528923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 363
Target Start/End: Original strand, 2381551 - 2381626
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa 363  Q
    |||||||||||||||  | ||||||||||  | | | ||| ||||||||||||||||||||| ||| |||||||||    
T  2381551 agagtaatgatatttatataactattttgtgatattttttaagacaactttgttgttctctcatcttattggtcaa 2381626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 2935398 - 2935489
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagaga 378  Q
    |||||| || |||||  |||||| |||| ||||||  |||| |||||| ||||| |||| |||||||||||||||| |||||| ||||||||    
T  2935398 agagtagtgttatttgaacaactcttttagtacaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatggagagaga 2935489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 10565237 - 10565159
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||| | ||||||||| ||||| |||||||||||   |||||||||||||| ||||||||| || | |||||||||||    
T  10565237 ttagagcagtgatattttaacaaccattttggtacacc-tttgagacaactttattgttctctatttttattggtcaaaa 10565159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 25806420 - 25806503
Alignment:
Q  297 atattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    ||||||| ||||  ||||||||||||  ||| | |||| ||||||||||||| || | ||||||| ||||||||||||||||||    
T  25806420 atattttaacaatcattttggtacaaccttttaaacaattttgttgttctctttttttattggtcaaaaacaatagagagagag 25806503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 29846778 - 29846869
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||| |||||  |||| |||||| ||||||| ||||||| || |||||  |||||||| ||||||||    
T  29846778 agagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcgttggtaaaaaacaatggagagaga 29846869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 35368795 - 35368704
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||||||||  ||||||  |||| |||||  |||| |||||  ||||||| ||||||| ||||||||  |||||||||||||||||    
T  35368795 agagtaatgatatttgaacaacttgtttgctacaacttttgggacaatcttgttgtgctctcttttcattggtaaaaaacaatagagagaga 35368704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 11404842 - 11404915
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttg------agacaactttgttgttctctcttctcat 356  Q
    ||||||||||||||  ||||||||||||||||||| ||||       |||||| ||||||||||||||||||||    
T  11404842 gagtaatgatatttgaacaactattttggtacaatttttgggacaaggacaaccttgttgttctctcttctcat 11404915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 21481911 - 21481861
Alignment:
Q  325 tttgagacaactttgttgttctctcttctcattggtc-aaaacaatagaga 374  Q
    ||||||||||| |  |||||||||||||||||||||| |||||||||||||    
T  21481911 tttgagacaacctcattgttctctcttctcattggtcaaaaacaatagaga 21481861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 622388 - 622437
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||||||    
T  622388 gacaacttttattttctctcttctcattggtccaaaacaatagagagaga 622437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 377
Target Start/End: Complemental strand, 31300985 - 31300896
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagag 377  Q
    ||||||||||||||  ||||| |||||   |||||  ||| ||||||||||||||||| | || | ||||||| ||||||||||||||||    
T  31300985 gagtaatgatatttgaacaaccattttatgacaattcttgggacaactttgttgttcttttttgttattggtcaaaaacaatagagagag 31300896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 365
Target Start/End: Original strand, 9158940 - 9159000
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||| ||||| |||||  |||| |||||| ||||||| ||||||| |||||||||||||    
T  9158940 acaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaa 9159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 376
Target Start/End: Original strand, 26280676 - 26280764
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtca-aaacaatagagaga 376  Q
    ||||||| ||||||  |||| |||||||||| ||| |||| || ||  ||||||||||||||| ||||| |||| ||| ||||||||||    
T  26280676 gagtaataatatttgaacaattattttggtataatttttgggataatcttgttgttctctcttttcattagtcagaaataatagagaga 26280764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 44334743 - 44334779
Alignment:
Q  343 ttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||||||||||| ||||||||||||||||||    
T  44334743 ttctctcttctcattggtccaaaacaatagagagaga 44334779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 378
Target Start/End: Complemental strand, 47484432 - 47484372
Alignment:
Q  319 acaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| |||| || ||||||||||| ||||||| ||||||||| |||||||| ||||||||    
T  47484432 acaatttttgggataactttgttgtgctctcttttcattggtcaaaaacaatggagagaga 47484372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 379
Target Start/End: Complemental strand, 34976800 - 34976709
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaacaatagagagagag 379  Q
    |||||| |||||||||| |||| ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34976800 agagtagtgatattttgtcaaccattttggtacaacctttgagataactttgttgttctctcttctcattggtcaaaacaatagagagagag 34976709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 3335352 - 3335422
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||    
T  3335352 tgatattttgacagccattttgatacaatatttgagacaactttgttgttctctcttttcattggtaaaaa 3335422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 608548 - 608639
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||| ||||||||||  ||||||||||||||||||   ||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  608548 agagcaatgatatttgaacaactattttggtacaactgttgggacaaccttgttgttctctcttctcattggtcaaaaacaatggagagaga 608639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 22422334 - 22422243
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||| |||||||||||||  ||||  ||||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  22422334 agagtaatgatatttgaacaattattttggtacaacttttggtacaactttgttgttctctcttctcattagtcaaaaacaatggagagaga 22422243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 379
Target Start/End: Original strand, 7303999 - 7304084
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    ||||||||  |||||| ||||| |||||  ||||||||||| |  |||||||||||||||||||||| ||||||||||||||||||    
T  7303999 tgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaatagagagagag 7304084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 9395221 - 9395315
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||||||  |||||| ||||| |||||  |||| |||||  ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  9395221 tttagagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttatcattggtcaaaaacaatggagagaga 9395315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 35050354 - 35050264
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||| || |||||||||||||||||||||| ||  ||||||| || ||||||||||| ||||| |||||| | |||| ||||||||||||    
T  35050354 gagtagtggtattttgacaactattttggtaaaacttttgagataattttgttgttctatcttcacattggttaaaaataatagagagaga 35050264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 6997434 - 6997514
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||||  |||| | ||||| |||||  |||| |||||| ||||||| ||||||| |||||||||||||    
T  6997434 tttagagtaatgatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaa 6997514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 378
Target Start/End: Complemental strand, 10557594 - 10557502
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||||  |||||| ||||| |||||  ||||  ||||  ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  10557594 tagagtaatgatatttgaacaacttttttgctacaacttttggaacaatcttgttgtactctcttttcattggtcaaaaacaatggagagaga 10557502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 378
Target Start/End: Original strand, 12151787 - 12151835
Alignment:
Q  331 acaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  12151787 acaactttgttgttctctcttcttattggtcaaaaacaatggagagaga 12151835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 16865712 - 16865636
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||  |||| | ||||| ||||| || |  |||||||||||||| ||||||| |||||||||||||    
T  16865712 gagtaatgatatttgaacaatttttttgctacaacatataggacaactttgttgtgctctcttttcattggtcaaaa 16865636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 3800736 - 3800686
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagagag 379  Q
    |||||||||  | |||||||||||||||||| |||||||||||||||||||    
T  3800736 gacaactttcattttctctcttctcattggtccaaaacaatagagagagag 3800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 32135325 - 32135415
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  |||||| ||||| |||||  |||  |||||  ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  32135325 gagtaatgatatttgaacaacttttttgctacaacttttaggacaatcttgttgtgctctcttttcattggtcaaaaacaattgagagaga 32135415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 11742926 - 11742962
Alignment:
Q  343 ttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||||||| |||||||||||||||||    
T  11742926 ttctctcttctcattggtcaaaaacaatagagagaga 11742962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 37970116 - 37970026
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37970116 gagtagtgatattttaacaaccattttggtacaacatttgagacaactttgttgttctctcttctcattggtcaaaaacaatagagagaga 37970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 2600421 - 2600512
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  2600421 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagagaga 2600512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 47379737 - 47379653
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  47379737 tgatattttgacaactattttggtgcaacttttgagacaactttgttgttctctcttctcattggttaaaaacaatagagagaga 47379653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 640575 - 640485
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  640575 gagtagtgatattttgacaatcattttggtataatctttgagacaactttgttgttctctcttctcattggtcaaaaacaattgagagaga 640485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 11070412 - 11070321
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||||||||  ||||||||| ||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  11070412 agagtagtgatattttgacaatcattttggtagaatctttgagacaactttgttcttctctcttttcattggtcaaaaacaatagagagaga 11070321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 379
Target Start/End: Original strand, 28548129 - 28548214
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagagag 379  Q
    ||||||||| ||||| ||||| ||||||| |||||||||||||| |||||||||||||| ||||| | |||| |||||||||||||    
T  28548129 tgatattttaacaaccattttagtacaatctttgagacaactttattgttctctcttcttattggttaaaaagaatagagagagag 28548214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 41458792 - 41458864
Alignment:
Q  293 aatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||| || |||||| ||||||    
T  41458792 aatgatattttgacaatcattttggtacaacttttgagacaactttgttgttctcttttttcattgatcaaaa 41458864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 7295652 - 7295559
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    ||||||||||||||||  |||||| |||||  ||||  ||||  ||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  7295652 tagagtaatgatatttgtacaacttttttgagacaacttttggaacaaccttgttattctctcttctcattggtcaaaaacaatagagagagag 7295559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 33341024 - 33341089
Alignment:
Q  300 ttttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |  |||||||||| ||||||    
T  33341024 ttttgacaactattttggtataatgtttgagacaactttgttgttttaccttctcattgatcaaaa 33341089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 378
Target Start/End: Complemental strand, 44185362 - 44185269
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| | ||||||||  |||||| ||||| |||||  ||||||||||| |  |||||||||||||||||||||| |||||||||||||||||    
T  44185362 ttagaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaatagagagaga 44185269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 384738 - 384658
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| ||||||||| | ||  |||||| |||||  ||||||||||||||||| |||||||||||||||||| ||||    
T  384738 tttagagtagtgatattttaaaaatcattttgatacaacctttgagacaactttgttattctctcttctcattggttaaaa 384658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 23034201 - 23034291
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||  |||| |||||| ||||||| |||| |||| ||||||| |||||||||||||||||    
T  23034201 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgctcttttcttattggtcaaaaacaatagagagaga 23034291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 45336046 - 45335955
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc--aaaacaatagagagaga 378  Q
    ||||| ||||||||  || ||| |||||||||||  |||| |||||| ||||||||||||||| | |||||||  |||||||||||||||||    
T  45336046 gagtagtgatatttgaactactcttttggtacaaattttgggacaaccttgttgttctctctttttattggtcaaaaaacaatagagagaga 45335955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 32316008 - 32315918
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    |||||||||||||  ||||||||||    ||||  |||| |||||| ||||| ||||||||||| ||||||| ||||||||||||||||||    
T  32316008 agtaatgatatttgaacaactatttgacgacaacttttgtgacaacattgtttttctctcttcttattggtcaaaaacaatagagagagag 32315918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 378
Target Start/End: Complemental strand, 27704621 - 27704528
Alignment:
Q  287 tagagtaa-tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||| ||||||||  |||||| ||||| |||||  |||| ||||||||||||||  |||||||| ||||||| |||||||||| ||||||    
T  27704621 tagagtaagtgatatttgaacaactcttttgttacaacttttgggacaactttgttgtgttctcttcttattggtcaaaaacaatagcgagaga 27704528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 378
Target Start/End: Original strand, 35212887 - 35212935
Alignment:
Q  331 acaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  35212887 acaactttgttgttctctcttctcattggttaaaaataatagagagaga 35212935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 36108354 - 36108279
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| ||||||||| |||||||||||||||| |  |||||||||||||| ||||| ||| || |||||| ||||||    
T  36108354 gagtagtgatattttaacaactattttggtac-acctttgagacaactttattgttatctattttcattgatcaaaa 36108279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 377
Target Start/End: Original strand, 27383844 - 27383891
Alignment:
Q  331 acaactttgttgttctctcttctcattggtc-aaaacaatagagagag 377  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||||    
T  27383844 acaactttgttgttctctcttctaattggtcaaaaataatagagagag 27383891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 44817838 - 44817783
Alignment:
Q  324 atttgagacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||||||||  | ||| |||||||||||||| ||||||||||||||||||    
T  44817838 atttgagacaactttcattttcgctcttctcattggtccaaaacaatagagagaga 44817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 47945167 - 47945076
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||  |||||| ||||| |||||  |||| |||||| |||||||  |||||||| ||||||| |||| ||||||||||||    
T  47945167 agagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaataatagagagaga 47945076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 47950597 - 47950506
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||  |||||| ||||| |||||  |||| |||||| |||||||  |||||||| ||||||| |||| ||||||||||||    
T  47950597 agagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaataatagagagaga 47950506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 1709467 - 1709377
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||| ||| |||| |||||  |||||||  |||||| | ||||||| |||||||||||||||||    
T  1709467 gagtagtgatatttgaacaactcttttggtataatttttgggacaatcttgttgtgttctctttttattggtcaaaaacaatagagagaga 1709377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 24380609 - 24380699
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||  ||||  ||||| |||||||  |||||||| ||||||| ||||||||| |||||||    
T  24380609 gagtagtgatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcttattggtcaaaaacaataaagagaga 24380699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 29923853 - 29923764
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||  |||| |||||| |||||||  ||| |||| ||||||| |||||||||||||||||    
T  29923853 gagtagtgatatttgaacaactcttttggtacaacttttg-gacaaccttgttgtgttcttttcttattggtcaaaaacaatagagagaga 29923764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 41910073 - 41910163
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||| | |||||||||||  |||  |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  41910073 gagtagtgatatttgaacaattcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 41910163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 48639273 - 48639363
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||  ||||  ||||| |||||||  |||||||  ||||||| |||||||||||||||||    
T  48639273 gagtagtgatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcgtattggtcaaaaacaatagagagaga 48639363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 48522298 - 48522249
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||||| |||| | ||||||| |||||||||||||||||    
T  48522298 gacaactttgttgttctttcttgttattggtcaaaaacaatagagagaga 48522249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 27943140 - 27943088
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgtt 341  Q
    ||||| ||||||||| ||||  ||||||||||||| |||||||||| ||||||    
T  27943140 gagtagtgatattttaacaatcattttggtacaatctttgagacaattttgtt 27943088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 38197842 - 38197754
Alignment:
Q  291 gtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||  |||||| ||||| |||||  |||| |||||  ||||||| || |||| ||||||||| |||||||| ||||||||    
T  38197842 gtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctatcttttcattggtcaaaaacaatggagagaga 38197754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 40693470 - 40693506
Alignment:
Q  343 ttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||||||| |||||||||||||||||    
T  40693470 ttctctcttctcattggtcaaaaacaatagagagaga 40693506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 38939086 - 38939169
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaacaatagagagaga 378  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  38939086 tgatattttgacaaccattttggtacaatttttgagataactttgttgttctctcttctcattggttaaaacaatagaaagaga 38939169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 28156386 - 28156310
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  28156386 gagtagtgatattttgacaactattttagtacaacctttgagacaactttgttgttctctcttctcattggtcaaaa 28156310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 5742544 - 5742635
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  5742544 agagtagtgatattttgacaaccattttggtacatcctttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagagaga 5742635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 379
Target Start/End: Complemental strand, 42651100 - 42651012
Alignment:
Q  292 taatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagagag 379  Q
    |||||||||||  ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  42651100 taatgatatttgaacaactattttggtacaacttttgagacaaccttgttgttctctcttctcattggttaaaaacaatagagagagag 42651012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 45405722 - 45405813
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||| ||||| ||||||||||||  |||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  45405722 agagtagtgatattttaacaaccattttggtacaacctttgagacaactttattgttctctcttctcattggtcaaaaacaataaagagaga 45405813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 33635752 - 33635669
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagagag 377  Q
    ||||||||||||||| |||||  |||||| ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  33635752 tgatattttgacaaccattttaatacaatctttgagataactttattgttctctcttctcattggtcaaaaccaatagagagag 33635669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 34578226 - 34578301
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||| |||| ||||||    
T  34578226 agtaatgatattttaacaactattttggtataatttttgggacaactttgttgttctctcttcttattgatcaaaa 34578301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 32674119 - 32674210
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    |||||| ||||||||||||||| ||||| ||||||  |||||||||||||||||||| || ||||||||||| | ||||||||||| |||||    
T  32674119 agagtagtgatattttgacaaccattttagtacaacctttgagacaactttgttgttatcccttctcattggttaaaaacaatagaaagaga 32674210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 33692908 - 33692828
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||||  |||||| ||||| || ||| |||| |||||||||||||| ||||||| |||||||||||||    
T  33692908 tttagagtaatgatatttgaacaacttttttgttataatttttgggacaactttgttgtgctctcttttcattggtcaaaa 33692828  T

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Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 18550163 - 18550072
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  ||||||||||||||||||  |||| |||||| |||||||  |||||||| |||| || |||||||||||||||||    
T  18550163 agagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattgatcaaaaacaatagagagaga 18550072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 28713277 - 28713186
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||  |||||| |||||||||||| |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  28713277 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtcgaaaacaatagagagaga 28713186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 28720624 - 28720533
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||  |||||| |||||||||||| |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  28720624 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtcgaaaacaatagagagaga 28720533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 28728266 - 28728175
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||  |||||| |||||||||||| |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  28728266 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtcgaaaacaatagagagaga 28728175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 8233380 - 8233474
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||||||  ||| ||||||| ||||||  |||  || ||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  8233380 tttagagtaatgatatttgaacatctatttttgtacaactttttggataaccttgttgttctctcttctcattggtcaaaaacaatggagagaga 8233474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 14233532 - 14233608
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||| |  |||| |||||||||| ||  |||| ||||||||||||||||||||||||||||||| ||||    
T  14233532 gagtaatgatatctgaacaattattttggtataacttttgtgacaactttgttgttctctcttctcattggtaaaaa 14233608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 378
Target Start/End: Complemental strand, 25430831 - 25430739
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||| ||||||||  |||||| |||||||||||  |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  25430831 tagagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 25430739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 22836026 - 22836117
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||| |||||| |||| || ||| ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  22836026 agagtaatgatatttgaacaacttttttgctacaatttttgggataaccttgttgtgctctcttttcattggtcaaaaacaatggagagaga 22836117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 23709160 - 23709069
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagaga 378  Q
    ||||||||| |||||  |||||| ||||| |||||| |||| |||||| ||||| | ||||||| ||||||||||| |||||||||||||||    
T  23709160 agagtaatgttatttgaacaacttttttgctacaatttttgggacaaccttgttatgctctcttttcattggtcaagaacaatagagagaga 23709069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 41776359 - 41776268
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||| |||||  |||| |||||| ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  41776359 agagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaatggagagaga 41776268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 13924192 - 13924104
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagaga 376  Q
    ||||||| ||||||  |||||| |||||||||||  |||| |||||  ||||||| |||||||||||||||| |||| |||||||||||    
T  13924192 gagtaataatatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggttaaaaccaatagagaga 13924104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 353
Target Start/End: Complemental strand, 34883346 - 34883283
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttct 353  Q
    |||||||||||||  ||||||||||| ||||||  ||||| ||||| |||||||||||||||||    
T  34883346 agtaatgatatttaaacaactattttagtacaacttttgatacaaccttgttgttctctcttct 34883283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 37471827 - 37471736
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||| |||||  |||| |||||  ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  37471827 agagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttttcattggtcaaaaacaatggagagaga 37471736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 43590878 - 43590787
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||  || ||| |||||||||| ||| |||| ||||||| ||||||||| |||||||| ||||||||    
T  43590878 agagtaatgatatttgaacaacttttttactataatttttgagacaattttattgtgctctcttttcattggtcaaaaacaatggagagaga 43590787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 1422586 - 1422680
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| |||||||||||  |||||||||||| |||||  |||| |||||| ||||| |||| | || ||||||||| |||||||| ||||||||    
T  1422586 tttagaataatgatatttgaacaactattttgatacaacttttgggacaaccttgttattctattttttcattggtcaaaaacaatggagagaga 1422680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 23265239 - 23265317
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||  |||||| ||||| |||||  |||| ||||| |||||||| ||||||| | |||||||||||    
T  23265239 tagagtaatgatatttaaacaacttttttgttacaacttttgcgacaattttgttgtgctctctttttattggtcaaaa 23265317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 365
Target Start/End: Complemental strand, 32778067 - 32777990
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||  |||||| ||||| |||||| ||||||||||  ||||||| ||||||| ||||| |||||||    
T  32778067 tagagtaatgatatttaaacaacttttttgctacaat-tttgagacaatcttgttgtgctctcttttcattagtcaaaa 32777990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 34247957 - 34247867
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  |||||  |||||  ||||  |||| |||||| ||||||||||||||| ||||||||| ||||||||||| |||||    
T  34247957 gagtaatgatatttgtacaacccttttgagacaacttttgggacaaccttgttgttctctcttttcattggtcaaaaacaatagaaagaga 34247867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 21649057 - 21649134
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||||  |||||| ||||| |||||  |||| |||||| ||||||| ||||||| | |||||||||||    
T  21649057 agagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctctttttattggtcaaaa 21649134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 34838164 - 34838248
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||  |||||| |||||||||||  |||  |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  34838164 tgatatttgaacaactcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 34838248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 378
Target Start/End: Complemental strand, 44001241 - 44001149
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaa-acaatagagagaga 378  Q
    ||||||||||||||||  |||||| ||||| |||| | |||  |||||| ||| ||||||| ||||| |||||||||| ||||| ||||||||    
T  44001241 tagagtaatgatatttgaacaactcttttgttacatttttttggacaaccttgatgttctcccttcttattggtcaaatacaatggagagaga 44001149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 33511785 - 33511698
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagaga 374  Q
    |||||||||||||||  ||||||||||||  | ||  |||| |||||| || || ||||||||||| ||||||| |||||||||||||    
T  33511785 agagtaatgatatttgtacaactattttgtgaaaacttttgggacaacattcttcttctctcttcttattggtcaaaaacaatagaga 33511698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 29910141 - 29910191
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagagag 379  Q
    |||||||||  | |||||||||||||||||| |||||||||||||||||||    
T  29910141 gacaacttttattttctctcttctcattggttcaaaacaatagagagagag 29910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 22203102 - 22203179
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||| ||||||||||  |||||| ||||| |||||  |||| |||||| ||||||| ||||||| | |||||||||||    
T  22203102 agagcaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttgattggtcaaaa 22203179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 32185595 - 32185644
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  32185595 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagaga 32185644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 41304911 - 41304960
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||||||    
T  41304911 gacaacttttattttctctcttctcattggtccaaaacaatagagagaga 41304960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 27300523 - 27300439
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||  |||||| ||| |||||||  |||| |||||  |||||||  |||||||| ||||||| |||||||||||||||||    
T  27300523 tgatatttgaacaactctttcggtacaacttttgggacaatcttgttgtattctcttcttattggtcaaaaacaatagagagaga 27300439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 30462635 - 30462671
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaa 322  Q
    |||||||||||||||||  ||||||||||||||||||    
T  30462635 ttagagtaatgatatttgaacaactattttggtacaa 30462671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 40459688 - 40459728
Alignment:
Q  325 tttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  40459688 tttgagacaactttgttgttctccctttccattggtcaaaa 40459728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 7e-28; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 1151712 - 1151621
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  1151712 gagtagtgatattttgacaactattttggtacaacctttgagacaactttgttgttctcttttttcattggtcaaaaacaatagagagagag 1151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 34373192 - 34373103
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagaga 376  Q
    |||||| ||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34373192 agagtagtgatattttgacaaccattttggtataacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatagagaga 34373103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 25094529 - 25094447
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagaga 376  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  25094529 tgatattttgacaaccattttagtacaatctttgagacaactttgttgttctctcttctaattggtcaaaaacaatagagaga 25094447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 43026119 - 43026029
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||| ||||||||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  43026119 gagtagtgatattttgacaatcattttggtacaacctttgagacaactttgttgttctctcttctcattggttaaaaacaatagagagaga 43026029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 35518460 - 35518367
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    ||||||||||||||||  |||||||||||| |||||  |||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  35518460 tagagtaatgatatttgaacaactattttgatacaacttttgggacaactttgttgttctctcttcttattggtcaaaaacaatagagagagag 35518367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 40721955 - 40721878
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||| ||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  40721955 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggttaaaa 40721878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 38724204 - 38724295
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||  ||||||||| |||||||| ||||||||    
T  38724204 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctctattcattggtcaaaaacaatggagagaga 38724295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 9377647 - 9377722
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||| ||||| ||||||||| ||  ||||||||||||||||||||||||||||| |||||||||||    
T  9377647 agtaatgatattttaacaaccattttggtataacctttgagacaactttgttgttctctcttcttattggtcaaaa 9377722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 13850078 - 13850148
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||||||||||||| |||||||||||||    
T  13850078 tgatattttgacaactattttggtataacttttgagacaattttgttgttctctcttttcattggtcaaaa 13850148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 37827679 - 37827749
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  37827679 tgatattttaacaattattttggtacaatctttaagacaactttgttgttctctcttttcattggtcaaaa 37827749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 378
Target Start/End: Complemental strand, 4858295 - 4858206
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||| ||||||||||||||  ||||||||||||  |||||||||| |||||||||||||||| ||||||||| |||||||||||| ||||    
T  4858295 agtagtgatattttgacaatcattttggtacaacctttgagacaattttgttgttctctcttttcattggtcaaaaacaatagagggaga 4858206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 378
Target Start/End: Complemental strand, 8757730 - 8757637
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||||  ||||||||||||||||||  ||||  ||||| ||||||||||||||||| ||||||| |||||||| ||||||||    
T  8757730 ttagagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatggagagaga 8757637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 304886 - 304970
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||| ||||| |||||| |||||  ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  304886 tgatattttaacaaccattttgatacaacctttgagacaactttgttgttcactcttctcattggtcaaaaacaattgagagaga 304970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 27328997 - 27329073
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| ||||||||| ||||| |||||||||||   |||||||||||||||||||||||| ||||||||||||||||    
T  27328997 gagtagtgatattttaacaacaattttggtacatcttttgagacaactttgttgttctcttttctcattggtcaaaa 27329073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 30340177 - 30340086
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc--aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||  |||| |||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  30340177 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaaacaatagagagaga 30340086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 11728009 - 11728099
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||| ||||  ||||||||||||| ||| |||||||||||||||| |||||| ||||||||| ||||||||| |||||||    
T  11728009 gagtagtgatattttaacaatcattttggtacaatctttaagacaactttgttgttttctcttttcattggtcaaaaacaatatagagaga 11728099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 351
Target Start/End: Complemental strand, 24727589 - 24727523
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctctt 351  Q
    ||||||||| ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||    
T  24727589 tttagagtagtgatattttgacaaccattttggtacaacctttgagacaactttattgttctctctt 24727523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 23141537 - 23141461
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| ||||||||  |||||| |||||||||||  |||| |||||| |||||||||||||||||||||||||||||    
T  23141537 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaa 23141461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 23553327 - 23553251
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||| ||||||||  |||||| |||||||||||  |||| |||||| |||||||||||||||||||||||||||||    
T  23553327 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaa 23553251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 19523289 - 19523379
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  ||||||||||||||||||| ||||  |||| ||| |||||||||||| | ||||||| |||||||| ||||||||    
T  19523289 gagtaatgatatttaaacaactattttggtacaatttttggtacaattttattgttctctctttttattggtcaaaaacaatggagagaga 19523379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 376
Target Start/End: Complemental strand, 16463478 - 16463387
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagaga 376  Q
    |||||||||||||||||  |||||| || ||||||||  |||| |||||  ||||||| ||||||||| ||||||| |||||||||||||||    
T  16463478 ttagagtaatgatatttgaacaactcttatggtacaacttttgggacaatcttgttgtgctctcttcttattggtcaaaaacaatagagaga 16463387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 12257084 - 12256994
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||| |||| |||||| |||||||  | |||||| ||||||| |||||||||||||||||    
T  12257084 gagtagtgatatttgaacaacttttttggtacaatttttgggacaaccttgttgtgttttcttcttattggtcaaaaacaatagagagaga 12256994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 34141626 - 34141536
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||  ||||  |||||||||||||  |||||||| ||||||| |||||||||||||||||    
T  34141626 gagtagtgatatttgaacaactcttttggtacaacttttggaacaactttgttgtgttctcttcttattggtcaaaaacaatagagagaga 34141536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 28679311 - 28679223
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaacaatagagaga 376  Q
    |||||||||||||||  |||||| |||||||||||  |||| |||||| |||||||  |||||||| |||||| ||||  |||||||||    
T  28679311 agagtaatgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtattctcttcttattggtaaaaaagatagagaga 28679223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 37076836 - 37076748
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagaga 376  Q
    |||||||| |||||  |||||| |||| ||||||| |||| |||||| ||||| |||| |||||||||||||||| |||||| ||||||    
T  37076836 gagtaatgttatttgaacaactcttttagtacaatttttgtgacaaccttgttattctttcttctcattggtcaataacaatggagaga 37076748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 43205276 - 43205200
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||| |||||  |||||| ||||| |||||  |||| |||||||||||||| ||||||| |||||||||||||    
T  43205276 gagtaatgttatttgaacaacttttttgctacaacttttgggacaactttgttgtgctctcttttcattggtcaaaa 43205200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 11828707 - 11828798
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||| |||||  |||  |||||| ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  11828707 agagtaatgatatttgaacaacttttttgctacaacttttaggacaaccttgttgtgctctcttttcattggtcaaaaacaatggagagaga 11828798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 21805674 - 21805764
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagagaga 378  Q
    |||| ||||||||||| ||||| |||| |||||||| |||  |||||| || || |||||||||| |||||||||||| |||||||||||||    
T  21805674 agagcaatgatattttaacaaccattt-ggtacaatctttttgacaaccttcttattctctcttcccattggtcaaaagcaatagagagaga 21805764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 35705804 - 35705895
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||| |||||  |||| |||||  ||||||| ||||||| ||||||||| |||||||| ||||||||    
T  35705804 agagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttttcattggtcaaaaacaatggagagaga 35705895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 45202019 - 45202110
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||||| ||||| |||||  |||| |||||| ||||||| ||||||| |||||| || |||||||| ||||||||    
T  45202019 agagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattgatcaaaaacaatggagagaga 45202110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 22296013 - 22296107
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagagaga 378  Q
    ||||||||||| ||||||  |||||| ||||  |||||| |||| |||||| ||||||| |||| || ||||||||||||| ||||| |||||||    
T  22296013 tttagagtaataatatttgaacaactttttttctacaatttttgggacaaccttgttgtgctcttttttcattggtcaaaatcaatatagagaga 22296107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 41156891 - 41156981
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagagaga 378  Q
    ||||||||||||||  |||| | ||||| |||||  |||| ||||| |||||||| ||||||| ||||||||||||| |||| ||||||||    
T  41156891 gagtaatgatatttgaacaatttttttgctacaacttttgggacaattttgttgtgctctcttttcattggtcaaaagcaatggagagaga 41156981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 35203636 - 35203713
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||||  |||| | ||||| |||||| |||| |||||| ||||||| || |||| |||||||||||||    
T  35203636 agagtaatgatatttgaacaatttttttgctacaatttttgggacaaccttgttgtgctatcttttcattggtcaaaa 35203713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 37064242 - 37064165
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||| ||||||||   ||||| |||||||||||  |||| || ||| |||||||| ||||||||||||||||||||    
T  37064242 agagtactgatatttgatcaactcttttggtacaacttttgggataaccttgttgttttctcttctcattggtcaaaa 37064165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 378
Target Start/End: Original strand, 38027500 - 38027593
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||| ||||||||  |||||| |||| ||| ||  ||||| ||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  38027500 ttagagtagtgatatttaaacaactcttttagtataacttttgaaacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 38027593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 38533109 - 38533162
Alignment:
Q  312 ttttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||| |||| |||||| |||||||||||| || |||||||||||||    
T  38533109 ttttggtacaatttttgggacaaccttgttgttctctattgtcattggtcaaaa 38533162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 4432467 - 4432419
Alignment:
Q  332 caactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  4432467 caactttgtttttctctcttcttattggtcaaaaacaatagagagagag 4432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 35007988 - 35008064
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaa 364  Q
    |||||||||||||||  |||||| ||||  |||||  |||| |||||| ||||||| ||||||| ||||||||||||    
T  35007988 agagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgttgtgctctcttttcattggtcaaa 35008064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 546314 - 546363
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||||||    
T  546314 gacaacttttattttctctcttctcattggtccaaaacaatagagagaga 546363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 7497920 - 7497969
Alignment:
Q  330 gacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||||    
T  7497920 gacaacttttattttctctcttctcattggttcaaaacaatagagagaga 7497969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 350
Target Start/End: Complemental strand, 33569735 - 33569690
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctct 350  Q
    |||||| |||||||||||  ||||||||||||||||| ||||||||    
T  33569735 acaactcttttggtacaacttttgagacaactttgttattctctct 33569690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 34144488 - 34144529
Alignment:
Q  337 ttgttgttctctcttctcattggtcaaaacaatagagagaga 378  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||    
T  34144488 ttgtttttctctcttcttattggtcaaaacaatggagagaga 34144529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 36909772 - 36909821
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  36909772 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagaga 36909821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 40115699 - 40115630
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcatt 357  Q
    |||||||||||||||  |||||| ||||  |||||| |||| |||||| ||||||| ||||||| |||||    
T  40115699 agagtaatgatatttgaacaacttttttactacaatttttgggacaaccttgttgtgctctcttttcatt 40115630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 44484585 - 44484634
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  44484585 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagaga 44484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 13881278 - 13881202
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| ||||  | |||| ||||| |||||  |||| ||||||||| |||| ||||||| |||||||||||||    
T  13881278 gagtaatgacatttgaaaaacttttttgctacaacttttgtgacaactttattgtgctctcttttcattggtcaaaa 13881202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 14021403 - 14021327
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| ||||  | |||| ||||| |||||  |||| ||||||||| |||| ||||||| |||||||||||||    
T  14021403 gagtaatgacatttgaaaaacttttttgctacaacttttgtgacaactttattgtgctctcttttcattggtcaaaa 14021327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 3518366 - 3518276
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3518366 gagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagagaga 3518276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 10469835 - 10469925
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  10469835 gagtagtgatattttgacaatcattttggtacaatctttgagacaactttgttgttctctcttctcattggtcaaaaacaatggagagaga 10469925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 288 - 379
Target Start/End: Complemental strand, 1108186 - 1108090
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaa----ctttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    |||||| ||||||||||||||| ||||||||||||  ||||||||||    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  1108186 agagtagtgatattttgacaaccattttggtacaacctttgagacaaacaactttgttgttctctcttctcattggtcaaaaacaatagagagagag 1108090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 35358823 - 35358913
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| |||||||||  |||| ||||||||||||  ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  35358823 gagtagtgatattttagcaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggacaaaaacaatagagagaga 35358913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 378
Target Start/End: Complemental strand, 8442341 - 8442252
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtca-aaacaatagagagaga 378  Q
    |||||||||||||  ||||||||||||||| ||| ||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  8442341 agtaatgatatttgaacaactattttggtataatttttggaacaattttgttgttctctcttctcattggtcagaaacaatagagagaga 8442252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 378
Target Start/End: Complemental strand, 29766016 - 29765924
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||| |||||||||||||||| |  ||||||||| |||||||| ||||||||    
T  29766016 tagagtagtgatattttgacaactattttggtacaacctttgagataactttgttgttctctttattcattggtcaaaaacaatggagagaga 29765924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 378
Target Start/End: Original strand, 31625965 - 31626054
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||| ||||||||||||||| ||||| ||||||  ||| |||||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  31625965 agtagtgatattttgacaaccattttagtacaacttttaagacaactttattgttctctcttctcattggtcaaaaaaaatagagagaga 31626054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 5005274 - 5005206
Alignment:
Q  311 attttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  5005274 attttggtacaacttttgagacaactttgttgttctctcttatcattggtcaaaaacaatagagagaga 5005206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 8761834 - 8761754
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||| || |||||| || ||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  8761834 tttagaatagtgatatgttaacaaccattttggtacaacctttgagacaactttgttgttctctcttttcattggtcaaaa 8761754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 12612906 - 12612981
Alignment:
Q  290 agtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||  ||||| ||||||||||||  |||| |||||| |||||||||||||||||||||||||||||    
T  12612906 agtaatgatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaa 12612981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 292 - 378
Target Start/End: Original strand, 43152951 - 43153038
Alignment:
Q  292 taatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||  ||||||||||||||||||   ||  |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  43152951 taatgatatttgaacaactattttggtacaactcttaggacaactttgttgttctctcttctcattggtcaaaaacaatggagagaga 43153038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 35616689 - 35616779
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  ||||||||||||||| ||  |||| |||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  35616689 gagtagtgatatttgaacaactattttggtataaattttgggacaaccttgttgttctctcttcttattggtcaaaaacaatagagagaga 35616779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 9940238 - 9940161
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||||  | |||||||||| |||||| |||  |||||||||||||||||||||| |||||||||||||    
T  9940238 agagtaatgatatttgaataactattttgatacaatttttaggacaactttgttgttctctcttttcattggtcaaaa 9940161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 17574111 - 17574188
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||||  ||||||||||||||||||  |||| |||||| |||||||||| |||||||| |||||||||    
T  17574111 agagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgttctttcttctcactggtcaaaa 17574188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 376
Target Start/End: Original strand, 37821028 - 37821117
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagaga 376  Q
    |||||| ||||||||  ||||||||||||||||||  |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||    
T  37821028 agagtagtgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagaga 37821117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 39032492 - 39032582
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| ||||| |||||| |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  39032492 gagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 39032582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 35924454 - 35924377
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||||  |||||| |||||  ||||| ||||||||||| ||||||||||||||| | ||| |||||||    
T  35924454 agagtaatgatatttgtacaactcttttgaaacaatttttgagacaaccttgttgttctctctttttatttgtcaaaa 35924377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 38920022 - 38919953
Alignment:
Q  296 gatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||  |||||| |||||||||||  |||  |||||| |||||||||||||||||||||||||||||    
T  38920022 gatatttgaacaactcttttggtacaacttttaggacaaccttgttgttctctcttctcattggtcaaaa 38919953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 12203328 - 12203240
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagaga 376  Q
    ||||||| ||||||  |||||| |||||||||||  |||| |||||  ||||||| |||||||||||||||| |||| |||||||||||    
T  12203328 gagtaataatatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggttaaaaccaatagagaga 12203240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 5043072 - 5043017
Alignment:
Q  325 tttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  5043072 tttgggacaaccttgttgttctctcttctcattggtcaaaaacaacagagagagag 5043017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 6458950 - 6458860
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  |||||| ||||| || ||| |||| |||||| ||||||| ||||||| | ||||||| |||||||| ||||||||    
T  6458950 gagtaatgatatttgaacaacttttttgctataatttttgggacaaccttgttgtgctctcttttaattggtcaaaaacaatggagagaga 6458860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 376
Target Start/End: Complemental strand, 11306881 - 11306791
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagaga 376  Q
    |||||||| ||||||||  |||||||||| | |||||  |||||||||||||  || ||||||||| ||||||| | |||||||||||||||    
T  11306881 ttagagtagtgatatttgaacaactattt-gatacaacttttgagacaacttcttttttctctcttttcattggttaaaaacaatagagaga 11306791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 351
Target Start/End: Original strand, 22864270 - 22864329
Alignment:
Q  292 taatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctctt 351  Q
    |||||||||||  |||||||||||| || ||| |||| |||||| |||||||||||||||    
T  22864270 taatgatatttgaacaactattttgttataatttttgggacaacgttgttgttctctctt 22864329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 34698952 - 34698890
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattg 358  Q
    ||||||||| ||||  ||||||||||||  ||||| |||||||||||||| |||||||||||||    
T  34698952 tgatattttaacaatcattttggtacaac-tttgaaacaactttgttgttttctcttctcattg 34698890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 4173028 - 4173102
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagaga 378  Q
    |||||| |||| ||||||  |||| |||||| ||||| |||| |||||||||||||||| |||||| ||||||||    
T  4173028 acaactcttttagtacaacctttgtgacaaccttgttattctttcttctcattggtcaataacaatggagagaga 4173102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 2863728 - 2863656
Alignment:
Q  292 taatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||  |||| ||||| | |||||| |||| |||||| |||||||| |||||| |||||||||||||    
T  2863728 taatgatatttaaacaattatttag-tacaatttttgggacaaccttgttgttatctcttttcattggtcaaaa 2863656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 30574306 - 30574355
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  30574306 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagaga 30574355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 42825256 - 42825207
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||||||    
T  42825256 gacaacttttattttctctcttctcattggtccaaaacaatagagagaga 42825207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 18729161 - 18729241
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| | ||||||  |||||| |||||||||||  |||| |||||| |||||||  |||||| | |||||||||||    
T  18729161 tttagagtagtaatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctctttttattggtcaaaa 18729241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 46309010 - 46309101
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||||||||| ||||||||||||  |||||||||||||||| |||||||||| ||||||||| |||||||||||||||||    
T  46309010 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttgtagttctctcttttcattggtcaaaaacaatagagagaga 46309101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 4949120 - 4949212
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||| |||||||||||| | ||||||||||| |||||    
T  4949120 tagagtaatgatattttgataaccattttggtacaacttttgagacaactttgttgttctttcttctcattggttaaaaacaatagaaagaga 4949212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 34538107 - 34538023
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaa-acaatagagagaga 378  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||    
T  34538107 tgatattttgacaactattttggtacaacctttgagacaactttgttgttctatcttttcaatggtcaaacacaatagagagaga 34538023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 1987601 - 1987691
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||||||||  ||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  1987601 gagtagtgatattttgacaatcattttggtacaacctttgagacaactttgttgttctctcttttcattggtcaaaaacaatggagagaga 1987691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 9827869 - 9827963
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||| |||| ||||||||||||||  ||||||||| ||  |||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  9827869 tttaaagtagtgatattttgacaatcattttggtataacctttgagacaactttgttgttatctcttctcattggtcaaaaacaatggagagaga 9827963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 46799939 - 46799849
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaacaatagagagaga 378  Q
    |||| ||||||||||  ||||  ||||||||||||| |||| |||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  46799939 agagcaatgatatttgaacaatcattttggtacaatttttgggacaaccttgttgttctctattctcattggtcaaaacaatggagagaga 46799849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 379
Target Start/End: Original strand, 6093499 - 6093584
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    ||||||||| ||||||||||||||| ||| |||||||||| |||||||||||||||| | || |||| ||||||||||| ||||||    
T  6093499 tgatattttaacaactattttggtataatctttgagacaattttgttgttctctctttttatcggtcaaaaacaatagaaagagag 6093584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 378
Target Start/End: Original strand, 30250183 - 30250276
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||| ||||||||| | ||  ||||||||||||  ||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||    
T  30250183 ttagagtagtgatattttaaaaatcattttggtacaacctttgagacaactttgttgttctctctttttattggtcaaaaacaatagaaagaga 30250276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 365
Target Start/End: Complemental strand, 37732135 - 37732056
Alignment:
Q  286 ttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||| ||||||||| ||||| |||| |||||||| ||||| |||||||| |||||||||||| | |||||||||||    
T  37732135 ttagagtagtgatattttaacaaccatttcggtacaatctttgaaacaactttattgttctctctttttattggtcaaaa 37732056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 26442276 - 26442366
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||| ||||| ||||||||||||  ||||||||||||||||||||||| |||| | || ||| |||| ||||||||||||    
T  26442276 gagtagtgatattttaacaacaattttggtacaacctttgagacaactttgttgttctcccttcccgttcgtcaaaaaaaatagagagaga 26442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 36946980 - 36947070
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||||||||| |||||| || ||| ||||||| || |||||||||||||||| | |||| || |||||||||||||||||    
T  36946980 gagtagtgatattttgacaaccattttgatataatttttgagataattttgttgttctctctttttattgatcaaaaacaatagagagaga 36947070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 45678446 - 45678356
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  ||||||||||||||||||  ||||  ||||| ||||||||||||||| | ||||||| |||||||| ||||||||    
T  45678446 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctttttattggtcaaaaacaatggagagaga 45678356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 54801391 - 54801465
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagaga 378  Q
    |||||| ||||| || ||| ||||||||||||||||| ||||||||||||||||||||| || ||||||||||||    
T  54801391 acaactcttttgatataatttttgagacaactttgttattctctcttctcattggtcaataataatagagagaga 54801465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 33777074 - 33777001
Alignment:
Q  292 taatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||  ||||||||||||||||||| |||| || ||| ||||||||||||||| | |||||||||||    
T  33777074 taatgatatttgaacaactattttggtacaatttttgggataaccttgttgttctctctttttattggtcaaaa 33777001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 29577324 - 29577414
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||| ||||||  ||| ||| ||| ||||||| |||| |||||| ||||||||||||||| ||||||||| |||||||| ||||||||    
T  29577324 gagtaattatatttgaacatctacttttgtacaatttttgggacaaccttgttgttctctcttttcattggtcaaaaacaatggagagaga 29577414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 375
Target Start/End: Complemental strand, 31318925 - 31318844
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagag 375  Q
    |||||||||||||| ||| |||||||||  ||| |||||| ||| || ||||||||||||||||| | ||||||||||||||    
T  31318925 tgatattttgacaattatattggtacaacctttaagacaattttattcttctctcttctcattggttaaaaacaatagagag 31318844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 379
Target Start/End: Complemental strand, 8614366 - 8614274
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagagag 379  Q
    |||||| ||||||||  |||||| |||| ||||||| |||| |||||| |||||||  | |||||| ||||||| ||||||||||||||||||    
T  8614366 agagtagtgatatttgaacaactttttttgtacaatttttgggacaaccttgttgtgttttcttcttattggtcaaaaacaatagagagagag 8614274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 36110318 - 36110227
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| ||||||||  |||||| ||||| |||||| |||| |||||| |||||||  |||||||| ||||||| |||| ||||||||||||    
T  36110318 agagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaataatagagagaga 36110227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 50291466 - 50291375
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||| || |||||  |||||| |||||||||||  |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  50291466 agagtagtgttatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 50291375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 365
Target Start/End: Original strand, 54803255 - 54803294
Alignment:
Q  326 ttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  54803255 ttgagacaactttgttgttctctcttttcattggtcaaaa 54803294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 377
Target Start/End: Complemental strand, 3476052 - 3475962
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagag 377  Q
    |||||||||||||||||||||| ||||    |||| ||||| |||||| || || |||| |||| ||||||||| ||||||||||||||||    
T  3476052 agagtaatgatattttgacaaccatttgatgacaacatttgtgacaaccttatttttctttcttttcattggtcaaaaacaatagagagag 3475962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 378
Target Start/End: Complemental strand, 43983076 - 43982990
Alignment:
Q  293 aatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||  ||||| ||||||||||||  |||  |||||  | ||||||||||||||||||||||| |||||||| ||||||||    
T  43983076 aatgatatttgaacaaccattttggtacaacttttaggacaatctagttgttctctcttctcattggtcaaaaacaatggagagaga 43982990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 378
Target Start/End: Original strand, 46355195 - 46355269
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagaga 378  Q
    |||||| |||| ||||||  |||| |||||||||| | |||||| |||||||||||||| |||||||||||||||    
T  46355195 acaactctttttgtacaacttttgggacaactttggtattctcttttctcattggtcaataacaatagagagaga 46355269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 46791875 - 46791969
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||| | ||||||||  |||||| ||||| |||||  ||||||||||| |  ||||||||||| ||||||| || |||||||||||||||||    
T  46791875 tttagaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctctactcattgatcaaaaacaatagagagaga 46791969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 4878151 - 4878074
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||| ||||||||||  |||||| ||||| |||||  |||| |||||| ||||||| ||||||| |||||||||||||    
T  4878151 agagcaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaa 4878074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 8487819 - 8487742
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||||||||||||  |||| | ||||| |||||  ||||||||||| ||||||| ||||||| | |||||||||||    
T  8487819 agagtaatgatatttgaacaatttttttgctacaacttttgagacaaccttgttgtgctctctttttattggtcaaaa 8487742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 29863735 - 29863658
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||| ||||||||||  |||| |||||||||||||  ||||||||||| |||||| |||| ||||| |||||| ||||    
T  29863735 agagcaatgatatttgaacaattattttggtacaacttttgagacaacattgttgctctcccttcttattggttaaaa 29863658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 55960884 - 55960807
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    |||||| ||||||||| ||||| |||||| |||||| ||||||||||| |||||||| ||| |   ||||||||||||    
T  55960884 agagtagtgatattttaacaaccattttgatacaatctttgagacaacgttgttgttttctttgtacattggtcaaaa 55960807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 365
Target Start/End: Complemental strand, 18944472 - 18944392
Alignment:
Q  285 tttagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||| ||||||||  |||||| |||||||||||  |||| |||||| || ||||  |||||||| |||||||||||    
T  18944472 tttagagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattggtcaaaa 18944392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 31413674 - 31413750
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||  |||||| ||||| |||||  |||| |||||| ||||||| ||||||| | |||||||||||    
T  31413674 gagtaatgatatttgaacaacttttttgctacaagttttgtgacaaccttgttgtgctctctttttattggtcaaaa 31413750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 379
Target Start/End: Original strand, 32294639 - 32294731
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagagagag 379  Q
    |||||| ||||||||  |||||| |||||||| ||| |||| |||||| |||||||  ||| |||| ||| ||||||| ||||||||||||||    
T  32294639 agagtagtgatatttgaacaactcttttggtataatttttgggacaaccttgttgtgttcttttcttattcgtcaaaaacaatagagagagag 32294731  T

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Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 46686408 - 46686356
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgtt 341  Q
    ||||| ||||||||||||||| ||||||||||||  ||||| |||||||||||    
T  46686408 gagtagtgatattttgacaaccattttggtacaacctttgatacaactttgtt 46686356  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 53781723 - 53781815
Alignment:
Q  287 tagagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||||  |||||| || || |||||  |||| |||||| ||||| | ||||||| ||||||||| |||||||| ||||||||    
T  53781723 tagagtaatgatatttcaacaacttttgtgctacaacttttgggacaaccttgttatgctctcttttcattggtcaaaaacaatggagagaga 53781815  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 32574461 - 32574370
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagaga 378  Q
    ||||||||| |||||  |||| | |||| ||| ||  ||| ||||||||||| | || |||||||||||||||||| |||||||||||||||    
T  32574461 agagtaatgttatttgaacaattttttttgtataacttttaagacaactttggtattatctcttctcattggtcaataacaatagagagaga 32574370  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 22894051 - 22893961
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  |||||| ||||| |||||  |||| |||||  ||||||| ||||||| | ||||||| |||||||| ||||||||    
T  22894051 gagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctctttttattggtcaaaaacaatggagagaga 22893961  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 22945719 - 22945629
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||||||||||||  |||||| ||||| |||||  |||| |||||  ||||||| ||||||| | ||||||| |||||||| ||||||||    
T  22945719 gagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctctttttattggtcaaaaacaatggagagaga 22945629  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 38960548 - 38960638
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| ||||| |||||| |||| |||||  |||||||  |||||||| ||||||| |||| ||||||||||||    
T  38960548 gagtagtgatatttgaacaactcttttgatacaatttttgggacaatcttgttgtgttctcttcttattggtcaaaaataatagagagaga 38960638  T

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Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 378
Target Start/End: Original strand, 46844129 - 46844219
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagagaga 378  Q
    ||||||||||||||||||| ||||||  | ||||  || | |||||||||||| ||||||||| | ||||| | |||||||| ||||||||    
T  46844129 gagtaatgatattttgacatctatttaaggacaactttggtgacaactttgtttttctctctttttattggttaaaaacaatggagagaga 46844219  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 8026693 - 8026742
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  8026693 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagaga 8026742  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 37775331 - 37775404
Alignment:
Q  305 acaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaa-aacaatagagagag 377  Q
    |||||| |||| ||||||  ||||||||||| ||||| |||||| || ||||||||||| || |||||||||||    
T  37775331 acaactcttttcgtacaacttttgagacaaccttgttattctctattatcattggtcaataataatagagagag 37775404  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 41495155 - 41495106
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  41495155 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagaga 41495106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 19807312 - 19807396
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagagaga 378  Q
    ||||||||  |||||| |||| ||||||| |||| |||||| |||||||  | |||||| |||| |||||| |||||||||||||    
T  19807312 tgatatttgaacaactttttttgtacaatttttgggacaaccttgttgtgatatcttcttattgatcaaaaacaatagagagaga 19807396  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 21766724 - 21766640
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa-caatagagagaga 378  Q
    ||||||||  |||||| |||||||| ||  |||| |||||| |||||||  |||||||| |||||| |||| |||||||||||||    
T  21766724 tgatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttctcttcttattggttaaaaacaatagagagaga 21766640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 33593288 - 33593324
Alignment:
Q  329 agacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||||||||| | |||||||||||    
T  33593288 agacaactttgttgttctctctttttattggtcaaaa 33593324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 378
Target Start/End: Original strand, 48650186 - 48650234
Alignment:
Q  331 acaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||||||||||| ||||||| |||||||| ||||||||    
T  48650186 acaaccttgttgttctctcttcttattggtcaaaaacaatggagagaga 48650234  T

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Target: scaffold0592 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 378
Target Start/End: Complemental strand, 1097 - 1003
Alignment:
Q  286 ttagagtaatga-tattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  1097 ttagagtaatgaatattttgacaactattttggtacaacttttgagataactttgttgttctctcttttcattggtcaaaaacaacagagagaga 1003  T

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Target: scaffold0036 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 54556 - 54626
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaa 365  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  54556 tgatattttgacaactattttggtacaatctttgagacaactttgttgttctctctttttattggtcaaaa 54626  T

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Target: scaffold0542 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 3018 - 2935
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtcaaaacaatagagagaga 378  Q
    ||||||||||||||||||||||||| ||| ||||||| || ||| ||||||| ||||||||||| |||||||||||||||||||    
T  3018 tgatattttgacaactattttggtataatctttgagataatttttttgttctttcttctcattgatcaaaacaatagagagaga 2935  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 48838 - 48747
Alignment:
Q  288 agagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||||||  |||| | ||||| |||||| |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  48838 agagtaatgatatttgaacaattcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 48747  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 145230 - 145140
Alignment:
Q  289 gagtaatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    ||||| ||||||||  |||||| |||||||||||  |||| |||||| |||||||  |||||||| ||||||| |||||||||||||||||    
T  145230 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaatagagagaga 145140  T

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Target: scaffold0651 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 375
Target Start/End: Original strand, 4745 - 4826
Alignment:
Q  295 tgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattgg-tcaaaacaatagagag 375  Q
    |||||||||||||| ||| |||||||||  ||| |||||| ||| || ||||||||||||||||| | ||||||||||||||    
T  4745 tgatattttgacaattatattggtacaacctttaagacaattttattcttctctcttctcattggttaaaaacaatagagag 4826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 378
Target Start/End: Complemental strand, 3123 - 3036
Alignment:
Q  292 taatgatattttgacaactattttggtacaatatttgagacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||  |||||| ||||| |||||  |||| ||||||||| |||| ||||||| ||||||||| |||||||| ||||||||    
T  3123 taatgatatttgaacaacttttttgctacaacttttgggacaactttattgtgctctcttttcattggtcaaaaacaatggagagaga 3036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 378
Target Start/End: Complemental strand, 4443 - 4408
Alignment:
Q  343 ttctctcttctcattggtcaaaacaatagagagaga 378  Q
    ||||||||| ||||||||||||||||||||||||||    
T  4443 ttctctcttttcattggtcaaaacaatagagagaga 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 1425 - 1474
Alignment:
Q  330 gacaactttgttgttctctcttctcattggtc-aaaacaatagagagaga 378  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  1425 gacaactttgtttttctctcttcttattggtcaaaaacaatggagagaga 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 36797 - 36846
Alignment:
Q  330 gacaactttgttgttctctcttctcattggt-caaaacaatagagagaga 378  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||||||    
T  36797 gacaacttttattttctctcttctcattggtccaaaacaatagagagaga 36846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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