View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11092_high_44 (Length: 250)
Name: NF11092_high_44
Description: NF11092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11092_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 35753866 - 35753624
Alignment:
| Q |
1 |
agtttgtaagggtcaatttagtttgatacggttcatacttgcaaattttgcaatgttaaacatcttatttttgaagttgatcttggttatacgagatcac |
100 |
Q |
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| T |
35753866 |
agtttgtaagggtcaatttagtttgatatggttcatacttgcaaattttgcaatgttaaacatcttatttttgaagttgatcttggttatacgagatcac |
35753767 |
T |
|
| Q |
101 |
acgcaccaatgttgttaaacattacacaagacttgtctcgtatggaacagacatcacaaaaaatacgcattaaatcctttattttgtacgtaattaataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35753766 |
acgcaccaatgttgttaaacattacacaagacttgtctcgtatggaacggacatcataaaaaatacgcattaaatcctttattttgtacgtaattaataa |
35753667 |
T |
|
| Q |
201 |
nnnnnnnagttttcaacaccacaattctatgttgtctctgctt |
243 |
Q |
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|||||||||||||||||||||||||||||| ||||| |
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| T |
35753666 |
tttttttagttttcaacaccacaattctatgttgtctttgctt |
35753624 |
T |
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