View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11092_low_46 (Length: 251)
Name: NF11092_low_46
Description: NF11092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11092_low_46 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 50089728 - 50089964
Alignment:
| Q |
1 |
tataattgtaaaacttagattacgaaagagattatggaaaggggtaggtaggttccaaatgttttgtaagaaagtcaactaacataattgaaa-tgagac |
99 |
Q |
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| T |
50089728 |
tataattgtaaaacttagattacgaaagagattatggaaaggggtaggtaggttccaaatgttttgtaagaaagtcaactaacatatttgaaaatgagac |
50089827 |
T |
|
| Q |
100 |
gtgaagcaatacgaagagattggtttgtaacttttcatgaacaatatgcgatcaatatctatatgtagcataaaaatatttccagagtcaatatgcaata |
199 |
Q |
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|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50089828 |
gtgaagcaatacgaagagattgatttgtaacttttcaccaacaatatgcgatcaatatctatatgtagcataaaaatatttccagagtcaatatgcaata |
50089927 |
T |
|
| Q |
200 |
tctatgtgatgcagctttttgttcattagttccattt |
236 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
50089928 |
tctatgtgatgcagctttttgttcattagttccattt |
50089964 |
T |
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