View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11093_high_27 (Length: 295)
Name: NF11093_high_27
Description: NF11093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11093_high_27 |
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Alignment Details
Target: chr3 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 2529014 - 2529291
Alignment:
| Q |
1 |
aacccaacacaaaacctgcatttgtttcaccaatgtagtttctcaaagttcaattttttataaccatatgtaatacccaaaagagcaaaagagtgtgttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2529014 |
aacccaacacaaaacctgcatttgtttcaccaatgtagtttctcaaagttcaattttttataaccatatgtaatacccaaaagagcaaaagagtgtgttt |
2529113 |
T |
|
| Q |
101 |
taagacaaaatatttattggnnnnnnnttatcaagaaaataaatagaatgatgaaaattgaaaagtaccttatgagtgtgagacaccgatctgagaaagt |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2529114 |
taagacaaaatatttattggaaaaaaattatcaagaaaataaatagaatgatgaaaattgaaaagtaccttatgagtgtgagacaccgatctgagaaagt |
2529213 |
T |
|
| Q |
201 |
gaatgaatgaacaaagcaatgtgattaaggaacaagatcaacagtgtgagaaaaactaagttgataaacaaacaacct |
278 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2529214 |
gaatgaatgaacaaagcaatgtgagtaaggaacaagatcaacagtgtgagaaaaactaagttgataaacaaacaacct |
2529291 |
T |
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