View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11093_high_29 (Length: 291)
Name: NF11093_high_29
Description: NF11093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11093_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 47753066 - 47752803
Alignment:
| Q |
18 |
atataggagatttggttcaggtaaataatgatcagagtgctagagctttatgaatcataaagaaaccagagtacatgaaccaggtatcttgatcagagtg |
117 |
Q |
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| T |
47753066 |
atataggagatttggttcaggtaaataatgatcagcgtgctagagctttatgaatcataaagaaaccagagtacatgaaccaggtatcttgatcagagtg |
47752967 |
T |
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| Q |
118 |
ctcgagcaaggtattttgccttcgatgatatgtgcatctttttattttcatttgatgttagagtctactttgacatcatcaatcgttttcactgtttgtt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47752966 |
ctcgagcaaggtattttgccttcgatgatatgtgcatctttttattttcatttgatgttagagtctactttgacatcatcaatcgttttcactgtttgtt |
47752867 |
T |
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| Q |
218 |
gttttgagttactcgttgagttttcagatgtatgatttgatagcacagctgtaagtgatctctg |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47752866 |
gttttgagttactcgttgagttttcagatgtatgatttgatagcacagctgtaagtgatctctg |
47752803 |
T |
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