View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11093_high_44 (Length: 227)

Name: NF11093_high_44
Description: NF11093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11093_high_44
NF11093_high_44
[»] chr3 (24 HSPs)
chr3 (49-173)||(32083262-32083386)
chr3 (1-52)||(11819061-11819112)
chr3 (12-52)||(1075004-1075044)
chr3 (8-52)||(30156388-30156432)
chr3 (8-52)||(36691906-36691950)
chr3 (8-52)||(39610182-39610226)
chr3 (1-48)||(32080854-32080901)
chr3 (1-52)||(48652540-48652591)
chr3 (10-52)||(31462855-31462897)
chr3 (8-52)||(3456921-3456965)
chr3 (8-52)||(4206618-4206662)
chr3 (12-52)||(53155541-53155581)
chr3 (9-52)||(34960966-34961009)
chr3 (10-52)||(13702081-13702123)
chr3 (10-48)||(31270308-31270346)
chr3 (14-52)||(48400877-48400915)
chr3 (9-52)||(14585440-14585483)
chr3 (15-50)||(40883983-40884018)
chr3 (1-52)||(55090683-55090734)
chr3 (1-47)||(48854889-48854935)
chr3 (12-46)||(53402614-53402648)
chr3 (13-51)||(54706777-54706815)
chr3 (12-52)||(19861388-19861428)
chr3 (9-52)||(49628195-49628239)
[»] chr8 (18 HSPs)
chr8 (1-50)||(41361712-41361761)
chr8 (3-52)||(1810321-1810370)
chr8 (8-52)||(37612631-37612675)
chr8 (1-52)||(2025309-2025360)
chr8 (15-52)||(24791282-24791319)
chr8 (8-52)||(10147924-10147968)
chr8 (1-52)||(11161860-11161911)
chr8 (14-53)||(39067802-39067841)
chr8 (15-52)||(31407862-31407899)
chr8 (12-52)||(7583875-7583915)
chr8 (8-48)||(10338929-10338969)
chr8 (12-48)||(24699812-24699848)
chr8 (12-52)||(30026991-30027031)
chr8 (1-48)||(31202440-31202487)
chr8 (9-53)||(10042748-10042792)
chr8 (15-52)||(14600812-14600849)
chr8 (8-44)||(7583964-7584000)
chr8 (8-52)||(31308120-31308164)
[»] chr5 (17 HSPs)
chr5 (9-52)||(6281022-6281065)
chr5 (1-52)||(17331306-17331357)
chr5 (6-52)||(28040607-28040653)
chr5 (8-52)||(7771905-7771949)
chr5 (1-50)||(29097769-29097818)
chr5 (8-52)||(17096341-17096385)
chr5 (8-52)||(32347814-32347858)
chr5 (8-52)||(33164567-33164611)
chr5 (9-48)||(27241046-27241085)
chr5 (8-46)||(17699537-17699575)
chr5 (8-52)||(26295157-26295201)
chr5 (8-52)||(43493850-43493894)
chr5 (12-51)||(20483165-20483204)
chr5 (12-45)||(34431045-34431078)
chr5 (12-52)||(6635227-6635267)
chr5 (9-53)||(6887261-6887305)
chr5 (9-53)||(28618591-28618635)
[»] chr2 (28 HSPs)
chr2 (6-52)||(12891186-12891232)
chr2 (8-52)||(11937958-11938002)
chr2 (8-52)||(20561231-20561275)
chr2 (8-52)||(32015198-32015242)
chr2 (8-48)||(44942267-44942307)
chr2 (1-52)||(9978761-9978812)
chr2 (1-52)||(25067830-25067881)
chr2 (10-52)||(12704665-12704707)
chr2 (10-52)||(17268225-17268267)
chr2 (8-52)||(5754266-5754310)
chr2 (8-52)||(9690072-9690116)
chr2 (8-52)||(15919852-15919896)
chr2 (8-52)||(22597113-22597157)
chr2 (12-52)||(43474231-43474271)
chr2 (9-52)||(36867986-36868029)
chr2 (10-52)||(38535406-38535448)
chr2 (16-52)||(7073055-7073091)
chr2 (8-52)||(13879113-13879157)
chr2 (8-52)||(14019238-14019282)
chr2 (8-52)||(18089491-18089535)
chr2 (8-48)||(27095687-27095727)
chr2 (7-46)||(11798615-11798653)
chr2 (9-48)||(28231200-28231239)
chr2 (1-52)||(38384534-38384585)
chr2 (9-52)||(41797593-41797636)
chr2 (10-52)||(41841937-41841980)
chr2 (14-48)||(28261998-28262032)
chr2 (14-48)||(33012059-33012093)
[»] chr7 (28 HSPs)
chr7 (1-50)||(22747599-22747648)
chr7 (11-52)||(11832996-11833037)
chr7 (10-50)||(9785297-9785337)
chr7 (8-52)||(40761567-40761611)
chr7 (8-52)||(42603868-42603912)
chr7 (12-52)||(48304498-48304538)
chr7 (14-52)||(46026134-46026172)
chr7 (11-52)||(6667373-6667414)
chr7 (8-49)||(17473822-17473863)
chr7 (8-49)||(17579351-17579392)
chr7 (8-53)||(36579411-36579456)
chr7 (8-52)||(3266360-3266404)
chr7 (8-48)||(10574363-10574403)
chr7 (8-52)||(21990639-21990683)
chr7 (8-48)||(28665011-28665051)
chr7 (8-48)||(36719640-36719680)
chr7 (12-52)||(41287935-41287975)
chr7 (8-52)||(45457655-45457699)
chr7 (8-52)||(45482042-45482086)
chr7 (8-50)||(5684345-5684387)
chr7 (8-50)||(5709395-5709437)
chr7 (15-48)||(39533081-39533114)
chr7 (9-53)||(47749721-47749765)
chr7 (9-53)||(17221642-17221685)
chr7 (12-52)||(17509306-17509346)
chr7 (12-52)||(17543868-17543908)
chr7 (8-52)||(24988454-24988497)
chr7 (12-52)||(27535434-27535474)
[»] scaffold0312 (1 HSPs)
scaffold0312 (8-52)||(6115-6159)
[»] chr1 (17 HSPs)
chr1 (8-52)||(424390-424434)
chr1 (8-52)||(12871599-12871643)
chr1 (8-52)||(33487129-33487173)
chr1 (9-52)||(33939102-33939145)
chr1 (8-50)||(32784088-32784130)
chr1 (8-52)||(7995659-7995703)
chr1 (12-48)||(20411555-20411591)
chr1 (1-52)||(18343592-18343643)
chr1 (1-52)||(27534677-27534728)
chr1 (14-52)||(28678235-28678273)
chr1 (10-48)||(29205267-29205305)
chr1 (15-52)||(45750456-45750493)
chr1 (1-48)||(13488628-13488675)
chr1 (9-53)||(22032172-22032217)
chr1 (8-48)||(3232770-3232810)
chr1 (8-48)||(14265266-14265306)
chr1 (8-52)||(42490871-42490915)
[»] chr6 (12 HSPs)
chr6 (1-52)||(12481462-12481513)
chr6 (9-52)||(15590179-15590222)
chr6 (1-52)||(21507900-21507951)
chr6 (1-51)||(35219995-35220045)
chr6 (1-46)||(29927471-29927516)
chr6 (12-52)||(8693763-8693803)
chr6 (9-52)||(6419958-6420001)
chr6 (1-52)||(23654228-23654279)
chr6 (8-52)||(14783270-14783314)
chr6 (8-48)||(31937517-31937557)
chr6 (8-50)||(4921982-4922023)
chr6 (15-52)||(4084996-4085033)
[»] chr4 (28 HSPs)
chr4 (8-51)||(394373-394416)
chr4 (13-52)||(478115-478154)
chr4 (9-52)||(24611899-24611942)
chr4 (9-52)||(43244481-43244524)
chr4 (9-50)||(8712510-8712551)
chr4 (8-52)||(29268876-29268920)
chr4 (12-52)||(44757145-44757185)
chr4 (1-52)||(6911658-6911709)
chr4 (8-50)||(51152105-51152147)
chr4 (12-50)||(27394810-27394848)
chr4 (10-52)||(30202016-30202058)
chr4 (8-50)||(31521962-31522004)
chr4 (10-52)||(39837572-39837614)
chr4 (8-52)||(7060302-7060346)
chr4 (8-52)||(11210412-11210456)
chr4 (8-52)||(22757072-22757116)
chr4 (12-52)||(24568816-24568856)
chr4 (10-45)||(13965545-13965580)
chr4 (1-52)||(25658145-25658196)
chr4 (1-52)||(29922812-29922863)
chr4 (1-47)||(5814330-5814376)
chr4 (6-48)||(26674354-26674396)
chr4 (15-52)||(39523396-39523433)
chr4 (12-52)||(626650-626690)
chr4 (12-44)||(20400006-20400038)
chr4 (8-52)||(24825627-24825671)
chr4 (12-48)||(26742566-26742602)
chr4 (1-37)||(38944239-38944275)
[»] scaffold1379 (1 HSPs)
scaffold1379 (10-52)||(1187-1229)
[»] scaffold0536 (1 HSPs)
scaffold0536 (8-52)||(2878-2922)
[»] scaffold0121 (1 HSPs)
scaffold0121 (8-52)||(13348-13392)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-47)||(35065-35100)
[»] scaffold0432 (1 HSPs)
scaffold0432 (12-50)||(2519-2557)
[»] scaffold0001 (1 HSPs)
scaffold0001 (12-52)||(404361-404401)


Alignment Details
Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 32083262 - 32083386
Alignment:
Q  49 ctcttggctctaccaacctgtacacatttgnnnnnnnnnnnattctctaaaatcatgtagcggattctagcagtcaaacaatcaacaacaaattttcact 148  Q
    ||||||||||||||||||||||||||||||           ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  32083262 ctcttggctctaccaacctgtacacatttgtttttttttttattctctaaaatcatgtagcgcattctagcggtcaaacaatcaacaacaaattttcact 32083361  T
Q  149 agtcacattccaagtccgattctaa 173  Q
    |||||||||||| ||||||||||||    
T  32083362 agtcacattccaggtccgattctaa 32083386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11819112 - 11819061
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  11819112 acaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 11819061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 1075004 - 1075044
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1075004 gggtgatttttgggtcaaaattgaccataaatcacccctct 1075044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 30156388 - 30156432
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  30156388 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 30156432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 36691906 - 36691950
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  36691906 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 36691950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 39610226 - 39610182
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  39610226 ggaggggtgattattgggtcaaaattgaccataaatcacccctct 39610182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32080854 - 32080901
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  32080854 acaaatcggaggggtgatttttgggtcaaaattgaccctaaatcaccc 32080901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 48652540 - 48652591
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  48652540 acaaatcggaggggtgatttttgggtcaaagttgaccctaaatcacccctct 48652591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 31462855 - 31462897
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  31462855 aggggtgatttttgggtcaaaattgaccctaaatcacccctct 31462897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 3456965 - 3456921
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| |||||||||||| |||||||||||||||||||||||||||    
T  3456965 ggagaggtgatttttggatcaaaattgaccataaatcacccctct 3456921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 4206618 - 4206662
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||| | |||||||||||||||||||||||||||    
T  4206618 ggaggggtgattttttgatcaaaattgaccataaatcacccctct 4206662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 53155541 - 53155581
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  53155541 gggtgatttttgggtcaaaattgaccctaaatcacccctct 53155581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 34960966 - 34961009
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  34960966 gaggggtgatttttgggtcaaaattgaccctaagtcacccctct 34961009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 13702081 - 13702123
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  13702081 aggggtgacttttgggtcaaaattgaccctaaatcacccctct 13702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 31270346 - 31270308
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  31270346 aggggtgatttttgggtcaaaattgaccctaaatcaccc 31270308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 48400915 - 48400877
Alignment:
Q  14 gtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  48400915 gtgatttttgggtcaaaattgaccctaaatcacccctct 48400877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 14585483 - 14585440
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| |||||||||||||||||||||||  ||||||||||||||    
T  14585483 gaggagtgatttttgggtcaaaattgactctaaatcacccctct 14585440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 40883983 - 40884018
Alignment:
Q  15 tgatttttgggtcaaaattgaccataaatcacccct 50  Q
    ||||||||||||||||||||||| ||||||||||||    
T  40883983 tgatttttgggtcaaaattgaccctaaatcacccct 40884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 55090683 - 55090734
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| |||||||||||||||||||  ||||| ||| ||||||||||||||    
T  55090683 acaaatcggaggggtgatttttgggttgaaattaaccctaaatcacccctct 55090734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 48854935 - 48854889
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacc 47  Q
    |||||| ||||||||||||||||||| ||||||||||  ||||||||    
T  48854935 acaaatcggaggggtgatttttgggttaaaattgacccaaaatcacc 48854889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 53402648 - 53402614
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcac 46  Q
    |||||||||||||||||||||||||| ||||||||    
T  53402648 gggtgatttttgggtcaaaattgaccttaaatcac 53402614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 54706815 - 54706777
Alignment:
Q  13 ggtgatttttgggtcaaaattgaccataaatcacccctc 51  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  54706815 ggtgatttttgggtcaaaattgaccttaaattacccctc 54706777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 19861388 - 19861428
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||| ||||||||||||| ||||||||| ||||    
T  19861388 gggtgatttttgagtcaaaattgaccctaaatcacctctct 19861428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 49628195 - 49628239
Alignment:
Q  9 gaggggtgatttttgggtcaaaattga-ccataaatcacccctct 52  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||    
T  49628195 gaggggtgatttttaggtcaaaattgacccaaaaatcacccctct 49628239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41361761 - 41361712
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41361761 acaaatcggaggggtgatttttgggtcaaaattgaccataaatcacccct 41361712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 1810321 - 1810370
Alignment:
Q  3 aaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  1810321 aaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 1810370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 37612675 - 37612631
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  37612675 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 37612631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2025309 - 2025360
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  2025309 acaacttggaagggtgattttttggtcaaaattgaccataaatcacccctct 2025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 24791282 - 24791319
Alignment:
Q  15 tgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24791282 tgatttttgggtcaaaattgaccataaatcacccctct 24791319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 10147968 - 10147924
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  10147968 ggaggggtgattattgggtcaaaattgaccctaaatcacccctct 10147924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11161911 - 11161860
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| ||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  11161911 acaacttgaaggggtgatttttgggtcaaaattgaccctaaattacccctct 11161860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 39067802 - 39067841
Alignment:
Q  14 gtgatttttgggtcaaaattgaccataaatcacccctctt 53  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  39067802 gtgatttttgggtcaaaattgaccttaaatcacccctctt 39067841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 31407862 - 31407899
Alignment:
Q  15 tgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31407862 tgatttttgggtcaaaattgaccctaaatcacccctct 31407899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 7583875 - 7583915
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  7583875 gggtgatttttgggtcaaaattgatcctaaatcacccctct 7583915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 10338929 - 10338969
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  10338929 ggaggggtgatttttgcgtcaaaattgaccttaaatcaccc 10338969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 24699848 - 24699812
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||||| ||||||||||    
T  24699848 gggtgatttttgggtcaaaattgaccctaaatcaccc 24699812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 30026991 - 30027031
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  30026991 gggtgatttttgggtcaaaaatgaccctaaatcacccctct 30027031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31202487 - 31202440
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||| ||||| || ||||||||||||||||||||||| ||||||||||    
T  31202487 acaatttggatggatgatttttgggtcaaaattgaccttaaatcaccc 31202440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 10042792 - 10042748
Alignment:
Q  9 gaggggtgatttttgggtcaaaa-ttgaccataaatcacccctctt 53  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10042792 gaggggtgatttt-gggtcaaaaattgaccataaatcacccctctt 10042748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 14600812 - 14600849
Alignment:
Q  15 tgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  14600812 tgatttttgggtcaaaattgaccctaaatcacctctct 14600849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 7583964 - 7584000
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatc 44  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  7583964 ggaggggtgatttttgggtcataattgaccctaaatc 7584000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 31308164 - 31308120
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| |||||||||| | |||||||||||| ||||||||||||||    
T  31308164 ggagaggtgatttttagatcaaaattgaccttaaatcacccctct 31308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 6281065 - 6281022
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6281065 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 6281022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17331357 - 17331306
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  17331357 acaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 17331306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 28040653 - 28040607
Alignment:
Q  6 ttggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  28040653 ttggaggggtgatttttgggtcaaaattgaccgtaaatcacccctct 28040607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 7771905 - 7771949
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  7771905 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 7771949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29097818 - 29097769
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  29097818 acaaatcggaggggtgatctttgggtcaaaattgaccctaaatcacccct 29097769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 17096341 - 17096385
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  17096341 ggaggggtgattattgggtcaaaattgaccctaaatcacccctct 17096385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 32347814 - 32347858
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  32347814 ggaggggtgatttttgggtcaaagttgaccctaaatcacccctct 32347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 33164567 - 33164611
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  33164567 ggaggagtgatttttgagtcaaaattgaccataaatcacccctct 33164611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 27241085 - 27241046
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  27241085 gaggggtgatttttgggtcaaaattgatcataaatcaccc 27241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 17699575 - 17699537
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcac 46  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17699575 ggaggggtgatttttgggtcaaaattgaccctaaatcac 17699537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 26295157 - 26295201
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||    
T  26295157 ggaggggtgatttttggatcaaaattgaccctaaatcacctctct 26295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 43493894 - 43493850
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||    
T  43493894 ggagaggtgatttttggatcaaaattgaccctaaatcacccctct 43493850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 20483204 - 20483165
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctc 51  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  20483204 gggtgatttttgggtcaaaattgatcctaaatcacccctc 20483165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 34431078 - 34431045
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatca 45  Q
    |||||||||||||||||||||||||| |||||||    
T  34431078 gggtgatttttgggtcaaaattgaccctaaatca 34431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 6635267 - 6635227
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||| || ||||||| ||||||    
T  6635267 gggtgatttttgggtcaaaattggccctaaatcatccctct 6635227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 6887261 - 6887305
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctctt 53  Q
    ||||||||||||| || | |||||||||| |||||||||||||||    
T  6887261 gaggggtgattttgggttaaaaattgaccctaaatcacccctctt 6887305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 28618635 - 28618591
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctctt 53  Q
    ||||||||||||| || | |||||||||| |||||||||||||||    
T  28618635 gaggggtgattttgggttaaaaattgaccttaaatcacccctctt 28618591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 12891186 - 12891232
Alignment:
Q  6 ttggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  12891186 ttggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12891232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 11937958 - 11938002
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  11937958 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 11938002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 20561231 - 20561275
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  20561231 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 20561275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 32015242 - 32015198
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  32015242 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 32015198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 44942307 - 44942267
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44942307 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 44942267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9978761 - 9978812
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  9978761 acaatttgaaggggtgatttttgggtcaaaattgaccttaaatcacccctct 9978812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25067881 - 25067830
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  25067881 acaaatcggaggggtgatttttgggtcaaaattgaccctaaatcacctctct 25067830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 12704707 - 12704665
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  12704707 aggggtgatttttgggtcaaaattgaccctaaatcacccctct 12704665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 17268225 - 17268267
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  17268225 agggatgatttttgggtcaaaattgaccataaatcacccctct 17268267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 5754310 - 5754266
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||    
T  5754310 ggagggatgatttttgggtcaaaattgaccctaaatcacccctct 5754266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 9690072 - 9690116
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||    
T  9690072 ggaggggtgatttttgggtcaaatttgaccttaaatcacccctct 9690116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15919896 - 15919852
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  15919896 ggaggggtgatttttgggtcaaaattgactctaaatcacccctct 15919852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 22597157 - 22597113
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||    
T  22597157 ggagggatgatttttgggtcaaaattgaccttaaatcacccctct 22597113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 43474231 - 43474271
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  43474231 gggtgatttttgggtcaaaattgaccctaaatcacccctct 43474271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 36868029 - 36867986
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  36868029 gaggggtgatttttgagtcaaaattgaccctaaatcacccctct 36867986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 38535406 - 38535448
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  38535406 aggggtgctttttgggtcaaaattgaccctaaatcacccctct 38535448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 7073055 - 7073091
Alignment:
Q  16 gatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||| ||||||||||||||    
T  7073055 gatttttgggtcaaaattgaccctaaatcacccctct 7073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 13879113 - 13879157
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||    
T  13879113 ggaggggtgattattgggtcaaaattgaccctaaatcatccctct 13879157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 14019238 - 14019282
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||    
T  14019238 ggaggggtgattattgggtcaaaattgaccctaaatcatccctct 14019282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 18089491 - 18089535
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||    
T  18089491 ggaggagtgatttttggatcaaaattgaccctaaatcacccctct 18089535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 27095727 - 27095687
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  27095727 ggaggggtgatttttaggtcaaaattgaccctaaatcaccc 27095687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 11798615 - 11798653
Alignment:
Q  7 tggaggggtgatttttgggtcaaaattgaccataaatcac 46  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  11798615 tggaggggtgatttt-gggtcaaaattgaccataaatcac 11798653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 28231239 - 28231200
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  28231239 gaggggtgatttttgggttaaaattgaccctaaatcaccc 28231200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38384534 - 38384585
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| ||||  ||||||||||||||||||||||||  |||||||||||||    
T  38384534 acaaatcggagatgtgatttttgggtcaaaattgacccaaaatcacccctct 38384585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 41797636 - 41797593
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||    
T  41797636 gaggggtgatttttaggtcaaaattaaccctaaatcacccctct 41797593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 41841980 - 41841937
Alignment:
Q  10 aggggtgatttttgggtc-aaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  41841980 aggggtgatttttgggtcaaaaattgaccataaatcaaccctct 41841937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 28261998 - 28262032
Alignment:
Q  14 gtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||| ||||||||||    
T  28261998 gtgatttttgggtcaaaattgaccctaaatcaccc 28262032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 33012093 - 33012059
Alignment:
Q  14 gtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||| ||||||||||    
T  33012093 gtgatttttgggtcaaaattgaccctaaatcaccc 33012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22747599 - 22747648
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  22747599 acaacttggaggggtgatttttgggtcaaaattgaccctaaatcacccct 22747648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 11833037 - 11832996
Alignment:
Q  11 ggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  11833037 ggggtgatttttgggtcaaaattgaccataaatcatccctct 11832996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 9785337 - 9785297
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  9785337 aggggtgatttttgggtcaaaattgaccctaaatcacccct 9785297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 40761611 - 40761567
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  40761611 ggaggggtgatttttgggtcaaaattgaccctaaatcatccctct 40761567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 42603868 - 42603912
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||    
T  42603868 ggaggggtgatttttgagtcaaaattgaccataaatcaccgctct 42603912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 48304498 - 48304538
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  48304498 gggtgatttttgggtcaaaattgaccctaaatcacccctct 48304538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 46026134 - 46026172
Alignment:
Q  14 gtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  46026134 gtgatttttgggtcaaaattgaccctaaatcacccctct 46026172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 6667414 - 6667373
Alignment:
Q  11 ggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  6667414 ggggtgatttttgggtcaaaattgaccctaaatcactcctct 6667373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 17473822 - 17473863
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccc 49  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  17473822 ggaggggtgattttttggtcaaaattgaccctaaatcacccc 17473863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 17579392 - 17579351
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccc 49  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  17579392 ggaggggtgattttttggtcaaaattgaccctaaatcacccc 17579351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 36579411 - 36579456
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctctt 53  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||    
T  36579411 ggaggggtgattttcgggtcaaaattgaccctaaatcatccctctt 36579456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 3266404 - 3266360
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||    
T  3266404 ggagggatgattattggatcaaaattgaccataaatcacccctct 3266360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 10574403 - 10574363
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  10574403 ggaggggtgatttttgagtcaaaattgaccctaaatcaccc 10574363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 21990683 - 21990639
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  21990683 ggaggggtgatttttcagtcaaaattgaccctaaatcacccctct 21990639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 28665011 - 28665051
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  28665011 ggaggggtgattttagggtcaaaattgaccctaaatcaccc 28665051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 36719640 - 36719680
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  36719640 ggaggggtgatttttggatcaaaattgaccctaaatcaccc 36719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 41287975 - 41287935
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  41287975 gggtgattattgggtcaaaattgaccctaaatcacccctct 41287935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 45457655 - 45457699
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||    
T  45457655 ggaggagtgatttttgcgtcaaaattgaccctaaatcacccctct 45457699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 45482086 - 45482042
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||    
T  45482086 ggaggggtgattttggggtcaaaattgaccctaaatcactcctct 45482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 5684387 - 5684345
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||    
T  5684387 ggagaggtgatttttgcgtcaaaattgaccctaaatcacccct 5684345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 5709437 - 5709395
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||    
T  5709437 ggagaggtgatttttgcgtcaaaattgaccctaaatcacccct 5709395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 39533081 - 39533114
Alignment:
Q  15 tgatttttgggtcaaaattgaccataaatcaccc 48  Q
    ||||||||||||||||||||||| ||||||||||    
T  39533081 tgatttttgggtcaaaattgaccctaaatcaccc 39533114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 47749765 - 47749721
Alignment:
Q  9 gaggggtgatttttgggtcaaaa-ttgaccataaatcacccctctt 53  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  47749765 gaggggtgatttt-gggtcaaaaattgaccataaatcacccctctt 47749721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 17221685 - 17221642
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctctt 53  Q
    |||||||||||||||| |||||||| || ||||||||||||||||    
T  17221685 gaggggtgatttttgg-tcaaaattcactataaatcacccctctt 17221642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 17509306 - 17509346
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||| |||||||||||||| ||||||| ||||||    
T  17509306 gggtgattttttggtcaaaattgaccctaaatcatccctct 17509346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 17543908 - 17543868
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||| |||||||||||||| ||||||| ||||||    
T  17543908 gggtgattttttggtcaaaattgaccctaaatcatccctct 17543868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 24988454 - 24988497
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||| ||||||||||||||| | ||||||||||||    
T  24988454 ggaggggtgatttt-gggtcaaaattgaccctgaatcacccctct 24988497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 27535474 - 27535434
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||| | |||||||||| ||||||||||||||    
T  27535474 gggtgatttttggataaaaattgaccctaaatcacccctct 27535434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 6159 - 6115
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  6159 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 6115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 424390 - 424434
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  424390 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 424434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 12871643 - 12871599
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  12871643 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 12871599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 33487129 - 33487173
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  33487129 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctct 33487173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 33939102 - 33939145
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  33939102 gaggggtgatttttgggtcaaaattgaccctaaatcacccctct 33939145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 32784130 - 32784088
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  32784130 ggaggggtgatttttgggtcaaaattgaccctaaatcacccct 32784088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 7995659 - 7995703
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  7995659 ggagaggtgatttttgggtcaaaattgaccctaaatcacccctct 7995703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 20411591 - 20411555
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||||||||||||||||    
T  20411591 gggtgatttttgggtcaaaattgaccataaatcaccc 20411555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18343643 - 18343592
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| | |||||||||||||||||||||||||| | ||||||||||||||    
T  18343643 acaaatcgaaggggtgatttttgggtcaaaattgatcctaaatcacccctct 18343592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27534728 - 27534677
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  27534728 acaaatcggagggatgatttttgggtcaaaattgaccctaaatcatccctct 27534677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 28678235 - 28678273
Alignment:
Q  14 gtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  28678235 gtgatttttgggtcaaaattgaccctaaatcacccctct 28678273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 29205305 - 29205267
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  29205305 aggggtgatttttgggtcaaaattgaccctaaatcaccc 29205267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 45750493 - 45750456
Alignment:
Q  15 tgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  45750493 tgatttttgggtcaaaattgaccttaaatcacccctct 45750456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13488628 - 13488675
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||| ||| ||||||||||||||||||||| |||| ||||||||||    
T  13488628 acaaatcggatgggtgatttttgggtcaaaatcgaccctaaatcaccc 13488675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 22032172 - 22032217
Alignment:
Q  9 gaggggtgatttttgggtc-aaaattgaccataaatcacccctctt 53  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||    
T  22032172 gaggggtgatttttgggtcaaaaattgaccctaaatcatccctctt 22032217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 3232810 - 3232770
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    ||||||||||||||| | |||||||||||| ||||||||||    
T  3232810 ggaggggtgattttttgatcaaaattgaccctaaatcaccc 3232770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 14265306 - 14265266
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||  ||||||||||||| ||||||||||    
T  14265306 ggaggggtgatttttttgtcaaaattgaccctaaatcaccc 14265266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 42490915 - 42490871
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  42490915 ggaggggtgatttttaggtcaaacttgaccctaaatcacctctct 42490871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12481462 - 12481513
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  12481462 acaaatcggaggggtgatttttgggtcaaaattgatcctaaatcacccctct 12481513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 15590179 - 15590222
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  15590179 gaggggtgatttttgggtcaaaattgaccctaaatcacccctct 15590222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21507900 - 21507951
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  21507900 acaatttggaggggtgatgtttgggtcaaaattgaccctaaatcacccctct 21507951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35219995 - 35220045
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctc 51  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||||    
T  35219995 acaacttggaggggtgatttttgagtcaaaattgaccctaaatcacccctc 35220045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29927471 - 29927516
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcac 46  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||    
T  29927471 acaacttggaggagtgatttttgggtcaaaattgaccataaatcac 29927516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 8693763 - 8693803
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  8693763 gggtgatttttgggtcaaaattgaccttaaatcacccctct 8693803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 6419958 - 6420001
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  6419958 gaggggtgatttttggatcaaaattgaccctaaatcacccctct 6420001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23654279 - 23654228
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||| ||||    
T  23654279 acaaatcggatgggtgatttttgggtcaaaattgaccctaaatcacctctct 23654228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 14783270 - 14783314
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||    
T  14783270 ggaggcgtgatttttgggtcaaaattgaccctaaatcagccctct 14783314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 31937517 - 31937557
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  31937517 ggaggggtgatttttgggtcaaaactgaccctaaatcaccc 31937557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 4921982 - 4922023
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||||||| ||||||||||||||||||||| ||||||||||||    
T  4921982 ggaggggt-atttttgggtcaaaattgaccctaaatcacccct 4922023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 4085033 - 4084996
Alignment:
Q  15 tgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  4085033 tgatttttcggtcaaaattgaccctaaatcacccctct 4084996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 394373 - 394416
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctc 51  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  394373 ggaggggtgatttttgggtcaaaattgaccctaaatcacccctc 394416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 478115 - 478154
Alignment:
Q  13 ggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  478115 ggtgatttttgggtcaaaattgaccataaatcacccctct 478154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 24611899 - 24611942
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  24611899 gaggggtgatttttgggtctaaattgaccataaatcacccctct 24611942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 43244481 - 43244524
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  43244481 gaggggtgatttttgggtcaaaattgaccctaaatcacccctct 43244524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 8712551 - 8712510
Alignment:
Q  9 gaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  8712551 gaggggtgatttttgggtcaaaattgaccctaaatcacccct 8712510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 29268876 - 29268920
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  29268876 ggaggggtgattttagggtcaaaattgaccttaaatcacccctct 29268920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 44757145 - 44757185
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  44757145 gggtgatttttgggtcaaaattgaccttaaatcacccctct 44757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6911709 - 6911658
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||| |||| |||||||||||| |||||||||||| ||||||||||||||    
T  6911709 acaaatcggagaggtgatttttggatcaaaattgaccctaaatcacccctct 6911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 51152147 - 51152105
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  51152147 ggaggggtgatttttgggtcaatattgaccntaaatcacccct 51152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 27394848 - 27394810
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  27394848 gggtgatttttgggtcaaaattgaccctaaatcacccct 27394810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 30202058 - 30202016
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  30202058 aggggtgatttttggatcaaaattgaccttaaatcacccctct 30202016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 31522004 - 31521962
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  31522004 ggaggggtgatttttaggtcaaaattgaccctaaatcacccct 31521962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 39837614 - 39837572
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||  ||||||||||||||    
T  39837614 aggggtgatttttgggtcaaaattgacgctaaatcacccctct 39837572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 7060346 - 7060302
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||    
T  7060346 ggaggggtgatttttgggttaaaattgaccctaaattacccctct 7060302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 11210412 - 11210456
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||    
T  11210412 ggaggggtgatttttagggcaaaattgaccctaaatcacccctct 11210456  T

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Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 22757116 - 22757072
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||    
T  22757116 ggagtggtgatttttgagtcaaaattgaccctaaatcacccctct 22757072  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 24568816 - 24568856
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  24568816 gggtgatttttgggtcaaaattcaccctaaatcacccctct 24568856  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 13965580 - 13965545
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatca 45  Q
    |||||||||||||||||||||||||||| |||||||    
T  13965580 aggggtgatttttgggtcaaaattgaccctaaatca 13965545  T

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Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25658196 - 25658145
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| |||||| ||||||||||| ||||||||| ||| ||||||||||||||    
T  25658196 acaatttggagaggtgatttttgagtcaaaattaaccctaaatcacccctct 25658145  T

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Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29922863 - 29922812
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||| |||||||||||||| || |||||||||||||| ||||||||| ||||    
T  29922863 acaacttggaggggtgattattaggtcaaaattgaccctaaatcacctctct 29922812  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5814376 - 5814330
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgaccataaatcacc 47  Q
    |||| |||||||| |||||||||| |||||||||||| |||||||||    
T  5814376 acaacttggagggatgatttttggatcaaaattgaccctaaatcacc 5814330  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 26674396 - 26674354
Alignment:
Q  6 ttggaggggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    ||||||||||||||||| |||||||||||| | ||||||||||    
T  26674396 ttggaggggtgatttttaggtcaaaattgatcctaaatcaccc 26674354  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 39523433 - 39523396
Alignment:
Q  15 tgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  39523433 tgatttttgggtcaaaattgactctaaatcacccctct 39523396  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 626650 - 626690
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||||||||  || ||||||||||||||    
T  626650 gggtgatttttgggtcaaaattagccctaaatcacccctct 626690  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 20400006 - 20400038
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatc 44  Q
    |||||||||||||||||||||||||| ||||||    
T  20400006 gggtgatttttgggtcaaaattgaccctaaatc 20400038  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 24825671 - 24825627
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||| ||||||||| |||||||||||| | ||||||||||||||    
T  24825671 ggaggagtgatttttaggtcaaaattgatcctaaatcacccctct 24825627  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 26742566 - 26742602
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcaccc 48  Q
    |||||||||||||||||||||||| | ||||||||||    
T  26742566 gggtgatttttgggtcaaaattgatcctaaatcaccc 26742602  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38944239 - 38944275
Alignment:
Q  1 acaaattggaggggtgatttttgggtcaaaattgacc 37  Q
    |||| |||||||||||||||||||| |||||||||||    
T  38944239 acaatttggaggggtgatttttgggccaaaattgacc 38944275  T

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Target: scaffold1379 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 1187 - 1229
Alignment:
Q  10 aggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  1187 aggggtgatttttgggtcaaaattgaccttaaatcacccctct 1229  T

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Target: scaffold0536 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 2922 - 2878
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  2922 ggaggggtgattattgggtcaaaattgaccctaaatcacccctct 2878  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 13348 - 13392
Alignment:
Q  8 ggaggggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||    
T  13348 ggaggggtgatttttggatcaaaattgaccctaaatcacctctct 13392  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 35100 - 35065
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacc 47  Q
    |||||||||||||||||||||||||| |||||||||    
T  35100 gggtgatttttgggtcaaaattgaccctaaatcacc 35065  T

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Target: scaffold0432 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 2519 - 2557
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccct 50  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  2519 gggtgatttttgggtcaaaaatgaccctaaatcacccct 2557  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 404361 - 404401
Alignment:
Q  12 gggtgatttttgggtcaaaattgaccataaatcacccctct 52  Q
    ||||||||||||| |||||||||||| |||||| |||||||    
T  404361 gggtgatttttggatcaaaattgaccttaaatcgcccctct 404401  T

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