View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11093_low_36 (Length: 250)
Name: NF11093_low_36
Description: NF11093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11093_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 32358332 - 32358096
Alignment:
| Q |
1 |
tcgggtcggtaaatccgtacccggtttggtcctcgcaatataaaattattaatattaaaataaaataagtgtgctgttcacgtggacgtgactttcggtg |
100 |
Q |
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| T |
32358332 |
tcgggtcggtaaatccgtacccggtttggtcctcgcaatataaaattattaatattaaaataaaataagtgtgctgttcacgtggacgtgactttcggtg |
32358233 |
T |
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| Q |
101 |
tttgtttccgtaggagatgtgagaccgcgttgctgtcggtgtcgtgtttaatattgtggtctttctttctttctattttgtttggttgtttagtttgatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32358232 |
tttgtttccgtaggagatgtgagaccgcgttgctgtcggtgtcgtgtttaatattgtggtctttctttctttctattttgtttggttgtttagtttgatt |
32358133 |
T |
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| Q |
201 |
gcttgtgtggaaccattattattatgggtgtggctct |
237 |
Q |
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|||||||||||||||||||||||||||||||| |||| |
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| T |
32358132 |
gcttgtgtggaaccattattattatgggtgtgtctct |
32358096 |
T |
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