View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11094_low_14 (Length: 263)
Name: NF11094_low_14
Description: NF11094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11094_low_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 263
Target Start/End: Complemental strand, 45429952 - 45429703
Alignment:
| Q |
14 |
agagcaaagagaagaaaaggggaaaatggatttgaatgtaaaggatttcatagcaaaggaagttcccgattggaatgacgaagttatcgccgttgctcga |
113 |
Q |
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| T |
45429952 |
agagcaaagagaagaaaaggggaaaatggatttgaatgtaaaggatttcatagcaaaggaagttcccgattggaatgacgaagttatcgccgttgctcga |
45429853 |
T |
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| Q |
114 |
ttcaaagccttttccggtcaaagatccgattggcaacccaatttcatcttctggagaaatttaatcatcaaaatcgctacccattttggtttctttctca |
213 |
Q |
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| T |
45429852 |
ttcaaagccttttccggtcaaagatccgattggcaacccaatttcatcttctggagaaatttaatcatcaaaatcgctacccattttggtttccttctca |
45429753 |
T |
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| Q |
214 |
taaaaccttcccaggtactgcctagggtttttccattttcccctcttttt |
263 |
Q |
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| T |
45429752 |
taaaaccttcccaggtactacctagggtttttccatttttccctcttttt |
45429703 |
T |
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