View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11095_high_20 (Length: 407)
Name: NF11095_high_20
Description: NF11095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11095_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 1 - 398
Target Start/End: Complemental strand, 45641582 - 45641185
Alignment:
| Q |
1 |
catcccataaattcaccgcaagtgttctcttctcagacataatgccactgaatttcaaaatgagacaggacagaagaaacaccccacaatacagacaaat |
100 |
Q |
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| T |
45641582 |
catcccataaattcaccgcaagtgttctcttctcagacataatgccactgaatttcaaaatgagacaggacagaacaaacacccaacaatacagacaaat |
45641483 |
T |
|
| Q |
101 |
tccatctgaacacaacaaaataaaatcaataatggatatccaaacattactaatcaatcattcaatcaatgattcaatatgtggattgcattctttggaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45641482 |
tccatctgaacacaacaaaataaaatcaataatggatatccaaacattactaatcaatcattcaatcaatgattcaatatgtggattgcattctttggaa |
45641383 |
T |
|
| Q |
201 |
caaaaatcattcttctctaataaactcttcaacatagaatgagtaaatttaggatcattagggtcactaccagttgacccattagggttttccaatacat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
45641382 |
caaaaatcattcttctctaataaactcttcaacatagaatgagtaaatttaggatcattagggtcactactagttgacccattagggttttccaatacat |
45641283 |
T |
|
| Q |
301 |
ttggacgcgaaaaacaaaacttgcaaccaaatccatttcgagtagtagtactattatgaccctcaccttgaataatcaccaccttacctatgctactc |
398 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
45641282 |
ttggacgcgaaaaacaaaacttgcaaccaaatccatttcgagtagtagtactattatgaccctcaccttgaataatcaccaccttacctctgctactc |
45641185 |
T |
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