View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11095_high_35 (Length: 263)
Name: NF11095_high_35
Description: NF11095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11095_high_35 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 32 - 252
Target Start/End: Original strand, 595166 - 595386
Alignment:
| Q |
32 |
tatagatatcgagcgtgcgattaaaataatcacttaaaaaataagcacgtttttatgaccaagcttagtagcatcctcgtcctcagcctcattcattttt |
131 |
Q |
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| T |
595166 |
tatagatatcgagcgtgcgattaaaataatcacttaaaaaataagcacgtttttatgaccaagcttagtagcatcctcgtcctcagcctcattcattttt |
595265 |
T |
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| Q |
132 |
tctttattttgaaattcaactttggagtatggaggagttatcattttgttgactttgacacactccgcgttaagccgaacccaaatcgaaccaccgtccc |
231 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
595266 |
tctttattttgaaattcaactttggagtatggaggagttatcattttgttgactttgacacactccgcgttaagccgaacccaaatcgaaccaccgtccc |
595365 |
T |
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| Q |
232 |
acgtggcattacccacttctt |
252 |
Q |
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||||||||||||||||||||| |
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| T |
595366 |
acgtggcattacccacttctt |
595386 |
T |
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