View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11095_low_34 (Length: 268)
Name: NF11095_low_34
Description: NF11095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11095_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 78 - 260
Target Start/End: Original strand, 5846248 - 5846430
Alignment:
| Q |
78 |
ttttagcctctaaaggccatactgcacctcatcattttgataatttgaataaagaaacttatgatattgtaatcaattttataaaatattaaagtcgttc |
177 |
Q |
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| T |
5846248 |
ttttagcctcgaaaggccatactgcacctcatcattttgataatttgaataaagaaacttatgaaattgtaatcaattttataaaatattaaagtcgttc |
5846347 |
T |
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| Q |
178 |
aattttatctctacctattattattattttttatctataaatcaacaatttgagaccgcagttagtagtgtcgtgttcttctc |
260 |
Q |
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| T |
5846348 |
aattttatctctacctattattattactttttatctataaatcagcaatttgagaccgcagttagtagtgtcgtgttcttctc |
5846430 |
T |
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