View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11095_low_4 (Length: 789)

Name: NF11095_low_4
Description: NF11095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11095_low_4
NF11095_low_4
[»] chr3 (41 HSPs)
chr3 (19-393)||(31206300-31206676)
chr3 (533-779)||(31206889-31207126)
chr3 (392-476)||(31206753-31206837)
chr3 (393-463)||(35074042-35074112)
chr3 (394-476)||(54233389-54233471)
chr3 (393-470)||(43441777-43441854)
chr3 (392-476)||(23906873-23906957)
chr3 (400-476)||(28263646-28263722)
chr3 (400-476)||(41877789-41877865)
chr3 (400-476)||(50279981-50280057)
chr3 (400-476)||(52453986-52454062)
chr3 (400-475)||(34021357-34021432)
chr3 (394-476)||(12044642-12044724)
chr3 (402-476)||(35756081-35756155)
chr3 (400-476)||(13159762-13159838)
chr3 (400-476)||(36819057-36819133)
chr3 (400-475)||(11327210-11327285)
chr3 (400-469)||(50879703-50879772)
chr3 (400-476)||(9582053-9582129)
chr3 (400-468)||(30633708-30633776)
chr3 (400-476)||(32931812-32931888)
chr3 (400-476)||(53102796-53102872)
chr3 (402-476)||(30400052-30400126)
chr3 (400-470)||(44855358-44855428)
chr3 (400-470)||(46344521-46344591)
chr3 (394-476)||(50652489-50652571)
chr3 (394-476)||(53932279-53932361)
chr3 (400-469)||(14992183-14992252)
chr3 (424-476)||(1031345-1031397)
chr3 (394-462)||(1208060-1208128)
chr3 (400-476)||(20714344-20714420)
chr3 (400-476)||(40478181-40478257)
chr3 (400-476)||(45295633-45295709)
chr3 (395-475)||(47509037-47509116)
chr3 (395-470)||(47056414-47056489)
chr3 (395-470)||(51717548-51717623)
chr3 (400-470)||(40558895-40558965)
chr3 (393-443)||(42424365-42424414)
chr3 (400-461)||(8254143-8254204)
chr3 (384-476)||(27937065-27937158)
chr3 (400-476)||(42718222-42718296)
[»] chr8 (29 HSPs)
chr8 (394-470)||(5924917-5924993)
chr8 (394-470)||(5925162-5925238)
chr8 (386-470)||(7129640-7129723)
chr8 (396-476)||(37562031-37562111)
chr8 (400-476)||(14228794-14228870)
chr8 (400-476)||(30927825-30927901)
chr8 (393-476)||(2597047-2597130)
chr8 (398-470)||(30129516-30129588)
chr8 (400-476)||(41273616-41273692)
chr8 (392-470)||(10344435-10344513)
chr8 (392-470)||(11139003-11139081)
chr8 (393-476)||(28623010-28623095)
chr8 (393-475)||(36497763-36497845)
chr8 (400-476)||(41293616-41293691)
chr8 (400-475)||(37568506-37568581)
chr8 (400-475)||(43602317-43602392)
chr8 (400-470)||(11089684-11089754)
chr8 (393-462)||(37343492-37343561)
chr8 (400-476)||(19723100-19723176)
chr8 (400-476)||(36593680-36593756)
chr8 (400-476)||(43587742-43587818)
chr8 (394-465)||(8074614-8074684)
chr8 (402-476)||(6825173-6825247)
chr8 (424-470)||(6849179-6849225)
chr8 (402-476)||(14531722-14531796)
chr8 (393-475)||(27631049-27631130)
chr8 (398-476)||(34765742-34765820)
chr8 (400-470)||(34972172-34972242)
chr8 (407-476)||(6105336-6105405)
[»] chr6 (24 HSPs)
chr6 (392-470)||(33491845-33491923)
chr6 (393-476)||(1803970-1804053)
chr6 (400-470)||(27334971-27335041)
chr6 (400-470)||(27395711-27395781)
chr6 (400-470)||(2862179-2862249)
chr6 (400-470)||(2881440-2881510)
chr6 (400-476)||(3660247-3660323)
chr6 (392-476)||(11017483-11017567)
chr6 (400-476)||(15328590-15328666)
chr6 (400-476)||(28965734-28965810)
chr6 (400-475)||(3339393-3339468)
chr6 (393-476)||(7693416-7693498)
chr6 (394-476)||(6435137-6435219)
chr6 (392-476)||(17417120-17417205)
chr6 (400-476)||(2056884-2056960)
chr6 (400-476)||(15364760-15364836)
chr6 (412-476)||(17835713-17835777)
chr6 (400-476)||(25924758-25924834)
chr6 (392-476)||(30622125-30622208)
chr6 (400-470)||(237292-237362)
chr6 (394-476)||(12441628-12441710)
chr6 (392-466)||(19788963-19789036)
chr6 (392-466)||(28647322-28647395)
chr6 (393-475)||(30795983-30796064)
[»] chr2 (33 HSPs)
chr2 (394-476)||(36909732-36909813)
chr2 (393-476)||(10466075-10466158)
chr2 (392-476)||(10550345-10550429)
chr2 (400-476)||(37966457-37966533)
chr2 (400-476)||(6885011-6885087)
chr2 (400-476)||(23047977-23048053)
chr2 (400-476)||(27307139-27307215)
chr2 (400-476)||(36582357-36582433)
chr2 (394-470)||(44018137-44018213)
chr2 (400-476)||(44484550-44484626)
chr2 (394-433)||(42678688-42678727)
chr2 (400-470)||(3195981-3196051)
chr2 (394-476)||(30973879-30973961)
chr2 (395-476)||(17826148-17826229)
chr2 (392-476)||(31847632-31847717)
chr2 (400-476)||(29871249-29871325)
chr2 (394-476)||(5962739-5962821)
chr2 (410-476)||(33857318-33857384)
chr2 (395-469)||(38572047-38572121)
chr2 (407-476)||(36383563-36383632)
chr2 (394-470)||(2308213-2308288)
chr2 (400-476)||(10688042-10688118)
chr2 (400-476)||(30413626-30413702)
chr2 (400-476)||(38246645-38246721)
chr2 (392-475)||(29192536-29192618)
chr2 (393-475)||(3585728-3585810)
chr2 (394-476)||(12192048-12192130)
chr2 (398-476)||(12358414-12358492)
chr2 (400-470)||(23391169-23391239)
chr2 (533-567)||(39309976-39310010)
chr2 (407-476)||(28301963-28302032)
chr2 (400-465)||(33029996-33030061)
chr2 (394-475)||(39744483-39744563)
[»] chr1 (37 HSPs)
chr1 (394-476)||(26547335-26547417)
chr1 (393-470)||(34395807-34395884)
chr1 (394-470)||(51193021-51193097)
chr1 (397-476)||(7078391-7078470)
chr1 (400-470)||(50035432-50035502)
chr1 (400-476)||(7371842-7371918)
chr1 (393-476)||(25130804-25130887)
chr1 (398-476)||(11097776-11097854)
chr1 (394-476)||(48871843-48871925)
chr1 (400-476)||(26501396-26501472)
chr1 (394-470)||(33660152-33660227)
chr1 (392-476)||(42843230-42843314)
chr1 (393-476)||(30530287-30530369)
chr1 (410-476)||(19920863-19920929)
chr1 (393-465)||(5315323-5315394)
chr1 (400-476)||(13813659-13813735)
chr1 (416-476)||(25995561-25995621)
chr1 (392-476)||(30196813-30196897)
chr1 (394-470)||(43457708-43457783)
chr1 (389-476)||(9011746-9011833)
chr1 (393-476)||(29489246-29489329)
chr1 (400-470)||(6829679-6829749)
chr1 (393-475)||(8934422-8934503)
chr1 (394-476)||(34002209-34002290)
chr1 (400-476)||(10385515-10385591)
chr1 (400-476)||(27578283-27578359)
chr1 (421-465)||(39669918-39669962)
chr1 (400-476)||(49189105-49189181)
chr1 (395-475)||(50777312-50777392)
chr1 (393-468)||(7420743-7420818)
chr1 (407-470)||(36669271-36669334)
chr1 (393-427)||(11812497-11812531)
chr1 (393-470)||(46902709-46902787)
chr1 (393-470)||(3291312-3291389)
chr1 (400-453)||(5383883-5383936)
chr1 (394-435)||(5959518-5959559)
chr1 (394-443)||(21154357-21154405)
[»] chr4 (41 HSPs)
chr4 (387-476)||(2193690-2193779)
chr4 (394-476)||(19720529-19720611)
chr4 (394-476)||(32365555-32365637)
chr4 (391-476)||(20632533-20632618)
chr4 (400-476)||(8026658-8026734)
chr4 (400-476)||(24235421-24235497)
chr4 (400-476)||(44368096-44368172)
chr4 (393-476)||(13267366-13267448)
chr4 (393-476)||(32079210-32079293)
chr4 (394-476)||(15638231-15638313)
chr4 (401-475)||(31833117-31833191)
chr4 (400-476)||(5208221-5208297)
chr4 (400-476)||(9032881-9032957)
chr4 (400-476)||(27001303-27001379)
chr4 (392-476)||(33483992-33484076)
chr4 (400-476)||(47106012-47106088)
chr4 (400-476)||(53662336-53662412)
chr4 (393-476)||(18568702-18568785)
chr4 (392-466)||(11012236-11012309)
chr4 (394-475)||(20056484-20056565)
chr4 (400-476)||(3223090-3223166)
chr4 (400-476)||(51377187-51377263)
chr4 (397-476)||(36728513-36728592)
chr4 (421-476)||(46480421-46480476)
chr4 (400-470)||(1796472-1796541)
chr4 (394-476)||(15515885-15515967)
chr4 (394-475)||(22920159-22920240)
chr4 (394-475)||(22971559-22971640)
chr4 (392-476)||(32901430-32901514)
chr4 (400-476)||(37022362-37022438)
chr4 (400-476)||(51224732-51224808)
chr4 (400-476)||(56025357-56025433)
chr4 (392-475)||(4514152-4514234)
chr4 (392-475)||(13182433-13182516)
chr4 (393-476)||(35824006-35824088)
chr4 (392-427)||(40721862-40721897)
chr4 (397-476)||(41495114-41495193)
chr4 (538-576)||(13252527-13252565)
chr4 (392-470)||(34259933-34260011)
chr4 (402-476)||(53384238-53384311)
chr4 (393-470)||(42177937-42178014)
[»] chr5 (28 HSPs)
chr5 (393-476)||(14914471-14914553)
chr5 (407-476)||(12401293-12401362)
chr5 (393-476)||(17489449-17489532)
chr5 (393-466)||(18638729-18638801)
chr5 (400-476)||(9594579-9594655)
chr5 (400-476)||(15622145-15622221)
chr5 (400-476)||(30574271-30574347)
chr5 (400-476)||(33823588-33823664)
chr5 (393-476)||(8959261-8959344)
chr5 (400-475)||(15917920-15917995)
chr5 (400-470)||(3263402-3263472)
chr5 (392-470)||(4292890-4292968)
chr5 (400-470)||(7077233-7077303)
chr5 (400-476)||(12512894-12512970)
chr5 (393-476)||(41984168-41984251)
chr5 (400-476)||(9596708-9596784)
chr5 (400-476)||(11464017-11464093)
chr5 (400-476)||(22920386-22920462)
chr5 (423-466)||(8725333-8725376)
chr5 (400-475)||(25345440-25345515)
chr5 (400-463)||(36548274-36548337)
chr5 (270-300)||(2239196-2239226)
chr5 (394-476)||(3722965-3723046)
chr5 (394-432)||(14070499-14070537)
chr5 (400-470)||(16143604-16143674)
chr5 (393-475)||(16292138-16292219)
chr5 (400-470)||(32634815-32634885)
chr5 (393-434)||(14648021-14648062)
[»] chr7 (25 HSPs)
chr7 (393-475)||(37385120-37385202)
chr7 (392-476)||(10014841-10014925)
chr7 (400-476)||(26041411-26041487)
chr7 (400-476)||(30864311-30864387)
chr7 (400-476)||(44511240-44511316)
chr7 (393-475)||(37149362-37149444)
chr7 (394-476)||(42431824-42431906)
chr7 (400-476)||(27164731-27164807)
chr7 (393-476)||(8742484-8742567)
chr7 (400-475)||(33050285-33050360)
chr7 (394-470)||(1838347-1838423)
chr7 (392-476)||(17500798-17500881)
chr7 (392-476)||(17552333-17552416)
chr7 (394-466)||(49089053-49089124)
chr7 (410-476)||(39369403-39369469)
chr7 (393-470)||(8326232-8326309)
chr7 (436-476)||(1790092-1790132)
chr7 (400-476)||(2346953-2347029)
chr7 (400-476)||(38978593-38978668)
chr7 (400-476)||(48057391-48057467)
chr7 (394-428)||(1790128-1790162)
chr7 (402-471)||(19880127-19880197)
chr7 (394-476)||(25614709-25614791)
chr7 (400-470)||(30201366-30201436)
chr7 (392-470)||(42476454-42476532)
[»] scaffold0514 (1 HSPs)
scaffold0514 (400-476)||(1390-1466)
[»] scaffold0172 (1 HSPs)
scaffold0172 (400-476)||(17076-17152)
[»] scaffold0003 (1 HSPs)
scaffold0003 (400-476)||(88909-88985)
[»] scaffold0002 (1 HSPs)
scaffold0002 (400-476)||(147150-147226)
[»] scaffold0004 (1 HSPs)
scaffold0004 (400-476)||(249036-249112)
[»] scaffold0618 (1 HSPs)
scaffold0618 (400-470)||(3468-3538)
[»] scaffold0576 (1 HSPs)
scaffold0576 (400-476)||(9531-9607)
[»] scaffold0193 (1 HSPs)
scaffold0193 (401-476)||(24774-24849)
[»] scaffold0121 (1 HSPs)
scaffold0121 (400-463)||(29897-29960)
[»] scaffold0085 (1 HSPs)
scaffold0085 (400-470)||(31194-31264)
[»] scaffold0020 (1 HSPs)
scaffold0020 (393-475)||(156008-156089)
[»] scaffold0238 (1 HSPs)
scaffold0238 (393-466)||(16502-16574)


Alignment Details
Target: chr3 (Bit Score: 306; Significance: 1e-172; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 19 - 393
Target Start/End: Original strand, 31206300 - 31206676
Alignment:
Q  19 tcaagatggattgtaatgaggtgaaaggaaatgatgatttcatgcaagttgcctcgcagaaaaaattacgaggaagcagaggcactattggtgaaaagtt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  31206300 tcaagatggattgtaatgaggtgaaaggaaatgatgatttcatgcaagttgcctcacagaaaaa-ttacgaggaagcagaggcactagtggtgaaaagtt 31206398  T
Q  119 aagtcatggactctggaagctcctttaacaacaagttgagactctaaggctaaatgaaggtggagttgttcaccttataaataaaacggtttgtaatgtt 218  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  31206399 aagtcatggactctggaagctc-tttaacaacaagttgagactctaaggctagatgaaggtggagttgttcaccttgaaaacaaaacggtttgtaatgtt 31206497  T
Q  219 caagatatgtgttc----cgtatgtcttacgatgtttgccaaccatatgttacttttgcaagatgtgaggtgtgttcttgaacttaacatgatttgttat 314  Q
    ||||||||||||||     |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31206498 caagatatgtgttcagtaagtatgtcttacgatgtttgccaaccatgagttacttttgcaagatgtgaggtgtgttcttgaacttaacatgatttgttat 31206597  T
Q  315 caatcaacatgtttgaactaatagttaactttttcaagtataataaaagaggtaaaattctaagaaaaattataaacta 393  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31206598 caatcaacatgtttgaactaatagttaactttttcaagtaaaataaaagaggtaaaattctaagaaaaattataaacta 31206676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 533 - 779
Target Start/End: Original strand, 31206889 - 31207126
Alignment:
Q  533 ttgttacaaaatgattatataaatatcatttctcaatgagatataagccactaaaaataagctataaatttgtgtgagaaaaaattgctatcaaacaaat 632  Q
    |||| ||||||||||| || ||||||||||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31206889 ttgtcacaaaatgattgtacaaatatcatttctgaataagatataagctagtaaaaataagttataaatttgtgtgagaaaaaattgctatcaaacaaat 31206988  T
Q  633 ctttttctatcgtataaacttaaaagctaccagttctaaatctgtcttttgccaaactccccatgaatgcaaatccaacttctccaagtttgtccccact 732  Q
    ||||||||||||||||||||        || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31206989 ctttttctatcgtataaact--------acaagttctaaatctgtcttt-gccaaactccccatgaatgcaaatccaacttctccaagtttgtccccact 31207079  T
Q  733 tagggaaataagtcaaacaaacatcacaaaagccaattcgtcctatg 779  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31207080 tagggaaataagtcaaacaaacatcacaaaagccaattcgtcctatg 31207126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 31206753 - 31206837
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  31206753 tagagtagtgatatatgtacatcaattttatgacaactttgattacaaccttatttttctctttttttattggtaaaaatcaatg 31206837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 35074042 - 35074112
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattg 463  Q
    ||||||||||||||| |||||| |||| ||| |||||||||| ||||| ||||||||||||||||||||||    
T  35074042 agagtagtgatatatatacatctattttatggcaactttgatgacaaccttatttttctcttttcttattg 35074112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 54233389 - 54233471
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||| |||||||||||||||| |||||    
T  54233389 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 54233471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 43441854 - 43441777
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    ||||||||||||| |||||||||| || |||||||||||||  ||||| ||| ||||||||||| |||||||||||||    
T  43441854 agagtagtgatatttgtacatccaattgatgacaactttgacgacaaccttacttttctctttttttattggtcaaaa 43441777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 23906873 - 23906957
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||| |||||||||| || |||||||||||| | ||||| ||  |||||||| |||||||||||||||| |||||    
T  23906873 tagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaacaatg 23906957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 28263722 - 28263646
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||| |||||||||||||||||||||  | |||||||||||||||| | |||||||||||||||| |||||    
T  28263722 tgatatttgttcatccatttcatgacaactttagtgacaactttatttttctttcttcttattggtcaaaaacaatg 28263646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 41877865 - 41877789
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| |||||||||||| | ||||||||||| |||||    
T  41877865 tgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctcttttttgattggtcaaaaacaatg 41877789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 50279981 - 50280057
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||||||||||||||| || ||||| || ||||||||| |||||||| ||||||| |||||    
T  50279981 tgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctcttcttatttgtcaaaaacaatg 50280057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 52453986 - 52454062
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||||||||||||||||  | |||||||| ||| ||||| |||||||||||||||| |||||    
T  52453986 tgatatttgtacatccatttcatgacaactttagtgacaactttgtttctctctcttcttattggtcaaaaacaatg 52454062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 34021357 - 34021432
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| |||||||||||| ||||||||||||  | |||||||| ||||||||| |||||||||||||||| ||||    
T  34021357 tgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaat 34021432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 12044642 - 12044724
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||||| || |||||||||||||| ||||| ||| |||| ||| ||||||||| |||||| |||||    
T  12044642 gagtagtgatatttgtacatccaattgatgacaactttgatgacaaccttacttttttctcttcttattgatcaaaaacaatg 12044724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 402 - 476
Target Start/End: Complemental strand, 35756155 - 35756081
Alignment:
Q  402 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||| |||||||| ||||||||||||||||| | |||||||| ||||||||| ||||||||||| |||| |||||    
T  35756155 atatttgtacatctatttcatgacaactttggtgacaactttgtttttctctcttcttattggttaaaaacaatg 35756081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 13159838 - 13159762
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  13159838 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 13159762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 36819133 - 36819057
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  36819133 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 36819057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 11327285 - 11327210
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| |||||||||||||||||||||||||  | ||||| || ||| ||||| |||||||||||||||| ||||    
T  11327285 tgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaat 11327210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 50879772 - 50879703
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaa 469  Q
    |||||| |||||||||||| ||||||||||||  | |||||||| || |||||| |||||||||||||||    
T  50879772 tgatatttgtacatccattccatgacaactttagtgacaactttgttgttctctcttcttattggtcaaa 50879703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 9582053 - 9582129
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||  |||||||||||| |||||| ||||| ||||||||| || ||||||||||| |||| |||||    
T  9582053 tgatatgtgtacatatatttcatgacaattttgatgacaaccttatttttcactcttcttattggttaaaaacaatg 9582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 468
Target Start/End: Original strand, 30633708 - 30633776
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaa 468  Q
    |||||| |||||||| |||| |||| |||||| || ||||| |||||||||||| ||||||||||||||    
T  30633708 tgatatttgtacatctattttatgataactttaatgacaaccttatttttctctcttcttattggtcaa 30633776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 32931812 - 32931888
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||||||  ||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  32931812 tgatatttgtacatccatttcacaacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 32931888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 53102796 - 53102872
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| ||||||||| |||||| |||||    
T  53102796 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatg 53102872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 30400052 - 30400126
Alignment:
Q  402 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||| |||||||||||| ||||||||||||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  30400052 atatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 30400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 44855428 - 44855358
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||| ||||||||||||||||  | ||||  |||||||||||| ||||||||||| ||||    
T  44855428 tgatatttgtacatcaatttcatgacaactttagtgacaatcttatttttctctcttcttattggttaaaa 44855358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 46344591 - 46344521
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||| ||||||| |||||||||  | ||||| |||||||||| | ||||||||||||||||    
T  46344591 tgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaa 46344521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 50652571 - 50652489
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||  | || ||||||| |||||| |||| |||  |||||||| |||||||||||||||| |||||    
T  50652571 gagtagtgatatttgtacatttaattgatgacaattttgatgacaattttgcttttctctcttcttattggtcaaaaacaatg 50652489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 53932279 - 53932361
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||| ||  |||||| | |||||||| ||||||| |||||    
T  53932279 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattagtcaaaaacaatg 53932361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 14992252 - 14992183
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaa 469  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| ||||  |||||| | ||||||||||    
T  14992252 tgatatttgtacatccatttaatgacaactttggtgacaactttgttttattcttttttgattggtcaaa 14992183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 424 - 476
Target Start/End: Original strand, 1031345 - 1031397
Alignment:
Q  424 acaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||| || |||||||||||||||| | |||||||||||||||| |||||    
T  1031345 acaacttttatgacaactttatttttctttcttcttattggtcaaaaacaatg 1031397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 462
Target Start/End: Complemental strand, 1208128 - 1208060
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttatt 462  Q
    |||||||||||| |||||||||| || ||| |||||||| | ||||||||  |||||||| ||||||||    
T  1208128 gagtagtgatatttgtacatccaattgatgtcaactttggtgacaactttgattttctctcttcttatt 1208060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 20714420 - 20714344
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||| || |||  | ||||| |||||||||| | |||||||||||||||| |||||    
T  20714420 tgatatttgtacatccattccatgataattttagtgacaaccttatttttctatcttcttattggtcaaaaacaatg 20714344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 40478181 - 40478257
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| ||||||| |||| | |||||||| |||| |||| || | ||||||||||| |||||    
T  40478181 tgatatttgtacatccatttaatgacaattttggtgacaactttgttttcctctcttttgattggtcaaaaacaatg 40478257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 45295633 - 45295709
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||| ||||| | |||||||| |||| |||| || | ||||||||||| |||||    
T  45295633 tgatatttgtacatccatttaatgacagctttggtgacaactttgttttcctctcttttgattggtcaaaaacaatg 45295709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 47509037 - 47509116
Alignment:
Q  395 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||||||||| |||||| || ||||||||||| |||| |||  |||  |||||||||||||||| ||| ||||    
T  47509037 agtagtgatatatgtacaaccatttgat-acaactttgatgacaatttttatttgttcttttcttattggtccaaaacaat 47509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 47056414 - 47056489
Alignment:
Q  395 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||| |||||| |||||||||| || ||||||| |||||| ||||| ||| |||||||| ||  ||||||||||||    
T  47056414 agtaatgatatttgtacatccagttgatgacaattttgatgacaaccttacttttctctctttctattggtcaaaa 47056489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 51717623 - 51717548
Alignment:
Q  395 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    ||||||||||| |||||||||| || |||||||||||| | ||||| ||  |||||||| ||||| ||||| ||||    
T  51717623 agtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttgttggtaaaaa 51717548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 40558895 - 40558965
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||| |||| ||| ||||||||  | ||||| |||||||||||| ||||||||| ||||||    
T  40558895 tgatatttgtacattcattccataacaactttagtgacaaccttatttttctctcttcttattgatcaaaa 40558965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 42424414 - 42424365
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaacttt 443  Q
    |||||||||||||||||||||||||||  | ||||||||||| ||||||||    
T  42424414 agagtagtgatatatgtacatccatttggt-acaactttgatgacaacttt 42424365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 461
Target Start/End: Complemental strand, 8254204 - 8254143
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttat 461  Q
    |||||| ||||||||||||||||||||| |||  | ||||| |||||| ||||| |||||||    
T  8254204 tgatatttgtacatccatttcatgacaattttagtgacaacattatttctctctcttcttat 8254143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 476
Target Start/End: Complemental strand, 27937158 - 27937065
Alignment:
Q  384 ttataaacta-gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||| ||||| |||||| |||||||| | || |||||||||||||| ||||| ||  |||| | | || ||||||||||||| |||||    
T  27937158 ttataaactaagagtaatgatatttgtacatctaattgatgacaactttgatgacaaccttgcttttttatctttttattggtcaaaaacaatg 27937065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 42718296 - 42718222
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||| ||||| ||||||| |||| | |||||||| ||| |||||||  | ||||||||||| |||||    
T  42718296 tgatatatgtacattcatttaatgacaattttggtgacaactttgtttctctcttt--tgattggtcaaaaacaatg 42718222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 5924993 - 5924917
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  5924993 gagtagtgatatatgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaa 5924917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 5925238 - 5925162
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| ||||||||||||||||    
T  5925238 gagtagtgatatatgtacatccatttgatgacaacttttatgacaaccttatttttctctattcttattggtcaaaa 5925162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 386 - 470
Target Start/End: Complemental strand, 7129723 - 7129640
Alignment:
Q  386 ataaactagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    ||||| |||||||||||||| ||||||| |||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  7129723 ataaaatagagtagtgatatttgtacattcatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaa 7129640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 476
Target Start/End: Original strand, 37562031 - 37562111
Alignment:
Q  396 gtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||| |||||||||| || |||||||||||||| ||||| || ||||||||| |||||||||||||||| |||||    
T  37562031 gtagtgatatttgtacatccaattgatgacaactttgatgacaaccttgtttttctctcttcttattggtcaaaaacaatg 37562111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 14228870 - 14228794
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||||||| || |||  | |||| |||||||||||||||| ||||||||||||| |||||    
T  14228870 tgatatatgtacatccatttcatgataattttagtgacaattttatttttctctttttttattggtcaaaaacaatg 14228794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 30927825 - 30927901
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||||||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  30927825 tgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 30927901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 2597047 - 2597130
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| ||||||| || || |||||||||||| | ||||| || ||||||||| |||||||||||||||| |||||    
T  2597047 agagtagtgatatttgtacattcaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 2597130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 398 - 470
Target Start/End: Complemental strand, 30129588 - 30129516
Alignment:
Q  398 agtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||| |||||||||| || |||||||||||| | ||||||||  |||||||| ||||||||||||||||    
T  30129588 agtgatatttgtacatccaattgatgacaactttggtgacaactttgcttttctctcttcttattggtcaaaa 30129516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 41273692 - 41273616
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  41273692 tgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaacaatg 41273616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 10344513 - 10344435
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    ||||||||||||||||||||||| |||| || |||||||| || ||||| || ||||||| | || |||||||||||||    
T  10344513 tagagtagtgatatatgtacatctatttgataacaacttttatgacaaccttgtttttctttctttttattggtcaaaa 10344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 11139081 - 11139003
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||||| |||||||| | || |||||||||||| | |||||||| ||||||| | || |||||||||||||    
T  11139081 tagagtagtgatatttgtacatcaaattgatgacaactttggtgacaactttgtttttctatctttttattggtcaaaa 11139003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 28623010 - 28623095
Alignment:
Q  393 agagtagtgatatatgtacatccatt--tcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||||||||| |  | |||||||||||| | ||||| ||  ||||||||||||||||||||||||| |||||    
T  28623010 agagtagtgatatttgtacatccaatattgatgacaactttggtgacaaccttgcttttctcttttcttattggtcaaaaacaatg 28623095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 36497845 - 36497763
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    ||||||||||||| |||||||| | || |||||||||||||| ||||| || ||||||||| || |||||||| |||| ||||    
T  36497845 agagtagtgatatttgtacatctaattgatgacaactttgataacaaccttgtttttctctctttttattggttaaaaacaat 36497763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 41293616 - 41293691
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  41293616 tgatatttgtacatccattccatgacaactttagtgacaac-ttgtttttctctcttcttattggtcaaaaacaatg 41293691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 37568506 - 37568581
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| |||||||||||||||| | ||||||  | ||||| || ||||||| |||||||||||||||||| ||||    
T  37568506 tgatatttgtacatccatttcattataactttagtgacaacattgtttttcttttttcttattggtcaaaaacaat 37568581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 43602317 - 43602392
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| ||| ||||| || | ||||||||||| ||||    
T  43602317 tgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttttgattggtcaaaaacaat 43602392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 11089754 - 11089684
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||||||||| ||||||| |||| | |||||||| |||||||||||| | |||||| ||||    
T  11089754 tgatatttgtacatccatttaatgacaattttggtgacaactttgtttttctcttttttgattggttaaaa 11089684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 37343561 - 37343492
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttatt 462  Q
    ||||||||||||| |||||||||| || |||| ||||||| | ||||| ||  |||||||||||||||||    
T  37343561 agagtagtgatatttgtacatccaattgatgataactttggtgacaaccttgattttctcttttcttatt 37343492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 19723100 - 19723176
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||| || |||||||||||||  | ||||| || ||||||||| |||||||| ||||||| |||||    
T  19723100 tgatatttgtacatctatatcatgacaactttagtgacaaccttgtttttctctcttcttattagtcaaaaacaatg 19723176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 36593680 - 36593756
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||| | ||||| |||||    
T  36593680 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattagccaaaaacaatg 36593756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 43587818 - 43587742
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||| |||||||| |||||||||||| | |||||||| ||||||||| || | |||||| |||| |||||    
T  43587818 tgatatttgtatatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtaaaaagcaatg 43587742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 8074614 - 8074684
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggt 465  Q
    |||||||||||||||||||  ||| |  ||||||||||||| ||||||||  |||||||| |||||||||||    
T  8074614 gagtagtgatatatgtacaatcatatt-tgacaactttgatgacaactttcattttctctcttcttattggt 8074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 6825173 - 6825247
Alignment:
Q  402 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||| |||||||| ||||  ||||||||||| |  |||| |||||||||||| ||||||||||| |||| |||||    
T  6825173 atatttgtacatctatttattgacaactttggtgtcaaccttatttttctctcttcttattggttaaaaacaatg 6825247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 6849179 - 6849225
Alignment:
Q  424 acaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||| || |||||||| |||||||||||| |||||||||||||    
T  6849179 acaacttttatgacaactttctttttctctttttttattggtcaaaa 6849225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 402 - 476
Target Start/End: Complemental strand, 14531796 - 14531722
Alignment:
Q  402 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||| |||||||| || |||||||||| || || ||||| |||||||||||| ||||||||| || ||| |||||    
T  14531796 atatttgtacatctatctcatgacaacattaatgacaaccttatttttctctcttcttattgatctaaaacaatg 14531722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 27631130 - 27631049
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||||||||||| |||||   ||||||||||||| |||||| |  |||||||| || | ||||||||||| ||||    
T  27631130 agagtagtgatatatgtacaaccattgg-tgacaactttgatgacaactattattttctctcttttcattggtcaaaaacaat 27631049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 398 - 476
Target Start/End: Original strand, 34765742 - 34765820
Alignment:
Q  398 agtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||| |||||||| | || ||||||| |||  | ||||| ||| ||||||||||| ||||||||||||| |||||    
T  34765742 agtgatatttgtacatctaattgatgacaattttagtgacaaccttacttttctctttttttattggtcaaaaacaatg 34765820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 34972242 - 34972172
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||| |||| |||||||||||| | |||| ||| |||||||||||| | |||| ||||||    
T  34972242 tgatatttgtacatctatttaatgacaactttggtgacaattttgtttttctcttttttgattgatcaaaa 34972172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 476
Target Start/End: Original strand, 6105336 - 6105405
Alignment:
Q  407 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| | |||||||||  | ||||||||||||| |||| || | ||||||||||| |||||    
T  6105336 tgtacatccatttaaagacaactttagtgacaactttattttcctctcttttgattggtcaaaaacaatg 6105405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 33491923 - 33491845
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||||||||||||||||| | |||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  33491923 tagagtggtgatatatgtacatccatttgaagacaactttgattacaaccttatttctctctcttcttattggtcaaaa 33491845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 1804053 - 1803970
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||| |||||||||||||||| |||||    
T  1804053 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 1803970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 27335041 - 27334971
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||||||||||||||||||||| || ||||| || ||||||||| || |||||||||||||    
T  27335041 tgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaa 27334971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 27395781 - 27395711
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||||||||||||||||||||| || ||||| || ||||||||| || |||||||||||||    
T  27395781 tgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaa 27395711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 2862249 - 2862179
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| || |||||||||| |||||||||||| | |||| ||| ||| ||||||||||||||||||||||    
T  2862249 tgatatttggacatccatttaatgacaactttggtgacaattttgtttctctcttttcttattggtcaaaa 2862179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 2881510 - 2881440
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| || |||||||||| |||||||||||| | |||||||| ||| ||||| ||||||||||||||||    
T  2881510 tgatatttggacatccatttaatgacaactttggtgacaactttgtttctctctcttcttattggtcaaaa 2881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 3660247 - 3660323
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| || ||||||||||||| |||||    
T  3660247 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatg 3660323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 11017567 - 11017483
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||| |||||||| |||||||||||| ||| ||||||||  | ||||| || ||| ||||| |||||||||||||||| |||||    
T  11017567 tagagcagtgatatttgtacatccattccataacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatg 11017483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 15328666 - 15328590
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| |||| |||| || | ||||||||||| |||||    
T  15328666 tgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatg 15328590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 28965734 - 28965810
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||||||| |||||||||||| | | |||||| ||| ||||| || | ||||||||||| |||||    
T  28965734 tgatatatgtacatccatttaatgacaactttggtgataactttgtttctctctcttttgattggtcaaaaacaatg 28965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 3339393 - 3339468
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| |||||||||||||||||||||||||  | ||||  || ||||||||| || ||||||||||||| ||||    
T  3339393 tgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctctctttttattggtcaaaaacaat 3339468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 7693498 - 7693416
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||||||| ||||||   |||||||||||| |||| |||  |||||||| |||||||||||| ||| |||||    
T  7693498 agagtagtgatatatgtacaaccatttgg-gacaactttgatgacaatttttattttctctcttcttattggtccaaaacaatg 7693416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 6435219 - 6435137
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||| ||| |||||||||| || ||||||| |||| | ||||| || ||||||||| ||||||||||| |||| |||||    
T  6435219 gagtagtggtatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatg 6435137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 17417120 - 17417205
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctct-tttcttattggtcaaaatcaatg 476  Q
    ||||| |||||||| |||| ||||| || |||||||||||| | ||||| ||||||||||||  ||||||||| |||||| |||||    
T  17417120 tagagaagtgatatttgtatatccaattgatgacaactttggtgacaaccttatttttctctcattcttattgatcaaaaacaatg 17417205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 2056960 - 2056884
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||| |||| ||||||||||||  | ||||| || ||| ||||| |||||||||||||||| |||||    
T  2056960 tgatatttgtacattcattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatg 2056884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 15364836 - 15364760
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| |||| |||| || | |||||| |||| |||||    
T  15364836 tgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatg 15364760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 412 - 476
Target Start/End: Complemental strand, 17835777 - 17835713
Alignment:
Q  412 atccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||| | ||||||||| || |||||||| ||||||||| ||||||||||| |||| |||||    
T  17835777 atccatttaaggacaactttaatgacaactttgtttttctctcttcttattggttaaaaacaatg 17835713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 25924758 - 25924834
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||| ||||| |||||||||||| | |||||||| |||| |||| || | ||||||||||| |||||    
T  25924758 tgatatttgtacattcatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatg 25924834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 30622208 - 30622125
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||| | ||||   |||||||||||| ||||||||  |||| ||| |||||||||||| ||| |||||    
T  30622208 tagagtagtgatatatgtacaactatttgg-gacaactttgatgacaactttcattttttctcttcttattggtccaaaacaatg 30622125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 237292 - 237362
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| || ||||| |||| |||||||||||  | ||| |||| ||||||||| ||||||||||||||||    
T  237292 tgatatttggacatctatttaatgacaacttttgtgacatctttgtttttctctcttcttattggtcaaaa 237362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 12441710 - 12441628
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||| | || |||||||||||| | ||||| ||  |||||||| ||||||| ||| |||| |||||    
T  12441710 gagtagtgatatttgtacatctaattgatgacaactttggtgacaaccttgcttttctctcttcttatcggttaaaaacaatg 12441628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 19788963 - 19789036
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 466  Q
    ||||||||||||||||||||| ||||||   |||||||||||| |||||| |  |||||||| |||| |||||||    
T  19788963 tagagtagtgatatatgtacaaccattt-gggacaactttgatgacaactctgattttctctcttctcattggtc 19789036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 28647322 - 28647395
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 466  Q
    ||||||||||||||||||||||||||||  | ||||||||| | ||||||||| |||  ||| |||| |||||||    
T  28647322 tagagtagtgatatatgtacatccatttggt-acaactttgttgacaactttaatttgttctcttctcattggtc 28647395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 30795983 - 30796064
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    ||||||||||||| |||||  ||||||  |||||||||  || |||||||| | ||||| |||||||||||||||||| ||||    
T  30795983 agagtagtgatatttgtactaccatttg-tgacaacttgtatgacaactttctatttcttttttcttattggtcaaaaacaat 30796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 36909732 - 36909813
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||| |||||    
T  36909732 gagtagtgatatttgtacatccatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaatg 36909813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 10466075 - 10466158
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||||  ||||| ||||||||| || |||||||| |||||||||||||||||| ||||||| |||||    
T  10466075 agagtagtgatatatgtacatctgtttcaagacaactttcatgacaactttgtttttctcttttcttattagtcaaaaacaatg 10466158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 10550345 - 10550429
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||| |||||| || |||||||||| |||||||||||| | |||||||| ||||||||| || ||||||||||||| |||||    
T  10550345 tagagtaatgatatttggacatccatttgatgacaactttgttgacaactttgtttttctctatttttattggtcaaaaacaatg 10550429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 37966533 - 37966457
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||||||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  37966533 tgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 37966457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 6885087 - 6885011
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||| |||||||||||||||||  | |||||||| ||||||||| |||||||| ||||||| |||||    
T  6885087 tgatatttgtacattcatttcatgacaactttagtgacaactttgtttttctctcttcttattagtcaaaaacaatg 6885011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 23047977 - 23048053
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  23047977 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 23048053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 27307139 - 27307215
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| | |||||||||| ||||||||||||  | ||||| |||||||||||| |||||||||||||||| |||||    
T  27307139 tgatatttatacatccattccatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatg 27307215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 36582433 - 36582357
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||| | ||||| || ||||||||| |||| ||||||||||| |||||    
T  36582433 tgatatttgtacatccatttgatgacaactttggtgacaaccttgtttttctctattctaattggtcaaaaacaatg 36582357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 44018137 - 44018213
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||||| ||||| ||||| ||||||||||| || | ||  || ||||||||||||||||||||||||||    
T  44018137 gagtagtgatatatctacattcatttaatgacaactttaatgaaaatcttgtttttctcttttcttattggtcaaaa 44018213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 44484550 - 44484626
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||| |||| |||||||||||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  44484550 tgatatttgtacatcaattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 44484626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 433
Target Start/End: Complemental strand, 42678727 - 42678688
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttga 433  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42678727 gagtagtgatatatgtacatccatttcatgacaactttga 42678688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 3195981 - 3196051
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| ||||||||||||||||    
T  3195981 tgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaa 3196051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 30973879 - 30973961
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||| |||||||||| | ||||| |||||| | |||||| ||||||||  || ||||||||||||| |||||    
T  30973879 gagtagtgatatatgaacatccatttgaagacaattttgatgataactttgtttttctcactttttattggtcaaaaacaatg 30973961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 17826229 - 17826148
Alignment:
Q  395 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||||||| |||| | ||||||||| || ||||| || ||||||||| |||||||| || |||| |||||    
T  17826229 agtagtgatatatgtacatctattttaagacaactttcatgacaaccttgtttttctctcttcttattagtaaaaaacaatg 17826148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 31847717 - 31847632
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaa-ctttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||||||||||   ||||||||| || |||| |||  ||||| |||||| ||||||||||||| |||||    
T  31847717 tagagtagtgatatatgtacatccatttgtagacaactttcatgacaaccttgttttttttctttttttattggtcaaaaacaatg 31847632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 29871249 - 29871325
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||| |||| ||||||||||||||||| | |||||||| ||| ||||| ||||||||||| |||| |||||    
T  29871249 tgatatttgtccatctatttcatgacaactttggtgacaactttgtttctctctcttcttattggttaaaaacaatg 29871325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 5962821 - 5962739
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||| | || |||| || |||| | | |||||| ||||||||| |||||||||||||||| |||||    
T  5962821 gagtagtgatatttgtacatctaattgatgataattttggtgataactttgtttttctctcttcttattggtcaaaaacaatg 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 33857384 - 33857318
Alignment:
Q  410 acatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||| |||| | |||||||||| | |||||||||||||||| | |||||||||||||||| |||||    
T  33857384 acatctatttaaggacaactttggtgacaactttatttttctgtcttcttattggtcaaaaacaatg 33857318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 38572121 - 38572047
Alignment:
Q  395 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaa 469  Q
    ||||||||||| ||||||| || || || ||||||||| | ||||| || ||||||||| |||||||||||||||    
T  38572121 agtagtgatatttgtacattcaattgataacaactttggtgacaaccttgtttttctctcttcttattggtcaaa 38572047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 36383632 - 36383563
Alignment:
Q  407 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||| ||||||| ||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  36383632 tgtacatcaatttcataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 36383563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 2308213 - 2308288
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||| |||||| |||| | |||||||||||||| ||||||||  |||||||| |||| ||||| |||||    
T  2308213 gagtagtgatatttgtacaaccatat-atgacaactttgatgacaactttcattttctctcttctcattggccaaaa 2308288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 10688118 - 10688042
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| |||| ||||||| || | ||| || ||||||||| |||||||| ||||||| |||||    
T  10688118 tgatatgtgtacatccattccatggcaactttaatgaaaaccttgtttttctctcttcttattagtcaaaaacaatg 10688042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 30413626 - 30413702
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| ||||||| |||| | ||||||||  |||||||| || | ||||||||||| |||||    
T  30413626 tgatatttgtacatccatttaatgacaattttggtgacaactttgcttttctctcttttgattggtcaaaaacaatg 30413702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 38246645 - 38246721
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||| ||| ||||||||||||  | ||||| || ||| ||||| |||||||||||||||| |||||    
T  38246645 tgatatttgtacatcaattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatg 38246721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 475
Target Start/End: Original strand, 29192536 - 29192618
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||||| ||||||||  |||| | |||||||| || |||||||| |||||||||| | | ||||||||||| ||||    
T  29192536 tagagtagtgatatttgtacatctctttctt-acaacttttatgacaactttgtttttctcttctatgattggtcaaaaacaat 29192618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 3585810 - 3585728
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    ||||||||||||| ||||||||  ||||   |||||||| || |||||||| ||||||||| || | |||| |||||||||||    
T  3585810 agagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattgatcaaaatcaat 3585728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 12192130 - 12192048
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||||| || || | ||||||| | ||||| ||  |||||||| || ||||||||||||| |||||    
T  12192130 gagtagtgatatttgtacatccaattgataataactttggtgacaaccttgcttttctctatttttattggtcaaaaacaatg 12192048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 398 - 476
Target Start/End: Complemental strand, 12358492 - 12358414
Alignment:
Q  398 agtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||| |||||||||| || |||||||||||| | ||||| ||  |||||| | || ||||||||||||| |||||    
T  12358492 agtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatctttttattggtcaaaaacaatg 12358414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 23391239 - 23391169
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||||||| ||||| ||||||    |||||||| ||||||||| ||||||||| ||||||    
T  23391239 tgatatttgtacatccattccatgataactttagcgacaactttgtttttctctcttcttattgatcaaaa 23391169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 567
Target Start/End: Complemental strand, 39310010 - 39309976
Alignment:
Q  533 ttgttacaaaatgattatataaatatcatttctca 567  Q
    ||||||||||||||||||| |||||||||||||||    
T  39310010 ttgttacaaaatgattatacaaatatcatttctca 39309976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 28302032 - 28301963
Alignment:
Q  407 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||| |||| |||| || |||||| |||||| | ||||| |||||||||||| ||||||| |||||    
T  28302032 tgtacatctatttaatgataattttgatgacaactatgtttttatcttttcttattagtcaaaaacaatg 28301963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 33029996 - 33030061
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggt 465  Q
    |||||| |||||||| || | |||||||||||||| ||||| || ||||||||| || ||||||||    
T  33029996 tgatatttgtacatctatctaatgacaactttgatgacaaccttgtttttctctatttttattggt 33030061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 39744483 - 39744563
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||| |||||| || ||||   |||||||| || |||||||| ||||||||| || | ||||||||||||||||    
T  39744483 gagtagtgatatttgtaca-ccttttctaaacaactttcatgacaactttgtttttctctattttgattggtcaaaatcaat 39744563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 8e-20; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 26547417 - 26547335
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||| |||||| |||||||| | ||||||||||| |||||    
T  26547417 gagtagtgatatatgtacatccatttgaagacaactttgatgacaaccttatttctctcttttttaattggtcaaaaacaatg 26547335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 393 - 470
Target Start/End: Original strand, 34395807 - 34395884
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||||||||| |||||||| | |||||||||||| |||||||| ||| |||||||||| |||||||||||    
T  34395807 agagtagtgatatatgtatatccatttgaagacaactttgatgacaactttgtttctctcttttctaattggtcaaaa 34395884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 51193021 - 51193097
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| || ||||||||| |||||||||| |||||    
T  51193021 gagtagtgatatatgtacatccatttgatgacaactttcatgacaacattgtttttctctcttcttattggccaaaa 51193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 397 - 476
Target Start/End: Original strand, 7078391 - 7078470
Alignment:
Q  397 tagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||||| | |||||||||||| ||||| || ||| |||||||||| ||||||||||| |||||    
T  7078391 tagtgatatatgtacatccatttgaagacaactttgatgacaaccttgtttctctcttttctaattggtcaaaaacaatg 7078470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 50035432 - 50035502
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||| ||||||||||||||||  | ||||||||||||||||||||| |||||||||||||    
T  50035432 tgatatttgtacatctatttcatgacaactttagtgacaactttatttttctcttttgttattggtcaaaa 50035502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 7371842 - 7371918
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||| ||||||||||||  | | |||||| ||||||||| |||||||||||||||| |||||    
T  7371842 tgatatatgtacatccattccatgacaactttactgataactttgtttttctctcttcttattggtcaaaaacaatg 7371918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 25130887 - 25130804
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||| |||||||| |||||||| ||||||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  25130887 agagcagtgatatttgtacatctatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 25130804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 398 - 476
Target Start/End: Original strand, 11097776 - 11097854
Alignment:
Q  398 agtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||||||||| | |||||||||||| ||||  || ||| |||||||||| ||||||||||| |||||    
T  11097776 agtgatatatgtacatccatttgaagacaactttgatgacaaacttttttctctcttttctaattggtcaaaaacaatg 11097854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 48871843 - 48871925
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||| |||||| ||||||||| || ||||| || |||||||| || |||||| ||||||| |||||    
T  48871843 gagtagtgatatatgtacatctatttcaagacaactttcatgacaaccttgtttttctccttccttattagtcaaaaacaatg 48871925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 26501472 - 26501396
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||| ||| |||||||||||| || ||||| || ||||||||| |||||||||||||||| |||||    
T  26501472 tgatatttgtacatctattacatgacaactttaatgacaaccttgtttttctctcttcttattggtcaaaaacaatg 26501396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 33660227 - 33660152
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||||||||||||||||| ||||||||||| || ||||| || ||||| | | ||||||||||||||||    
T  33660227 gagtagtgatatatgtacatccatttgatgacaactttcatgacaaccttgttttt-tatcttcttattggtcaaaa 33660152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 42843230 - 42843314
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||| |||||||||| || |||| || |||| | ||||| || ||||||||| |||||||||||||||| |||||    
T  42843230 tagagtagtgatatttgtacatccaattgatgataattttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 42843314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 30530287 - 30530369
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||||||| ||||||   |||||||||||| ||||||||  |||||||| |||||||||||| ||| |||||    
T  30530287 agagtagtgatatatgtacaaccatttgg-gacaactttgatgacaactttcattttctctcttcttattggtccaaaacaatg 30530369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 19920929 - 19920863
Alignment:
Q  410 acatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||| | |||||||||| | |||||||| ||||||||| |||||||||||||||| |||||    
T  19920929 acatccatttaaggacaactttggtgacaactttgtttttctctcttcttattggtcaaaaacaatg 19920863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 5315394 - 5315323
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggt 465  Q
    ||||||||| |||||||||| |||||| | |||||||||||| || |||||  ||||||||||||||||||||    
T  5315394 agagtagtgctatatgtacaaccatttta-gacaactttgatgacgactttcattttctcttttcttattggt 5315323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 13813735 - 13813659
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||| ||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  13813735 tgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 13813659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 476
Target Start/End: Complemental strand, 25995621 - 25995561
Alignment:
Q  416 atttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||| || ||||| |||||||||||| || ||||||||||||| |||||    
T  25995621 atttcatgacaactttaatgacaaccttatttttctctctttttattggtcaaaaacaatg 25995561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 30196897 - 30196813
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||| |||||| |  ||||   |||||||| || |||||||||||||||||| || | |||||||||||||||||    
T  30196897 tagagtagtgatatttgtacacctctttctaaacaactttcatgacaactttatttttctctattttgattggtcaaaatcaatg 30196813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 43457708 - 43457783
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||||||||||||||||| | ||||| |||||| ||||| || ||||||| |||| |||||| ||||||    
T  43457708 gagtagtgatatatgtacatccatttgaagacaaatttgatgacaaccttgtttttctgtttt-ttattgatcaaaa 43457783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 389 - 476
Target Start/End: Complemental strand, 9011833 - 9011746
Alignment:
Q  389 aactagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||| |||| |||||| |||||||||||||||||||||  ||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  9011833 aactatagtaatgatatttgtacatccatttcatgacaatgttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 9011746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 29489246 - 29489329
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||| |||||||| |||||||  ||||||||||||||||  | ||||| || ||||||| | |||||||||||||||| |||||    
T  29489246 agagcagtgatatttgtacatatatttcatgacaactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaatg 29489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 6829679 - 6829749
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||||||| ||||||||||||  | ||||  || ||||||||| ||||||||||||||||    
T  6829679 tgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaa 6829749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 8934422 - 8934503
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    ||||||||||||| || ||| ||||||  |||||| ||  || |||||||| |||||||||||||||||||||||||| ||||    
T  8934422 agagtagtgatatttgaacaaccatttg-tgacaatttctatgacaactttctttttctcttttcttattggtcaaaaacaat 8934503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 34002209 - 34002290
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||| | ||||   |||||||||||| ||||||||  |||||||| |||||||||||| ||| |||||    
T  34002209 gagtagtgatatatgtacaactatttgg-gacaactttgatcacaactttcattttctctcttcttattggtccaaaacaatg 34002290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 10385591 - 10385515
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||| ||||||| | |||| |||  ||||||||||| | ||||||||||| |||||    
T  10385591 tgatatttgtacatccatttaatgataactttggtgacaattttgcttttctcttttttgattggtcaaaaacaatg 10385515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 27578359 - 27578283
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||| |||| |||||||| |||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  27578359 tgatatttgtacattcattccatgacaattttagtaacaaccttgtttttctctattcttattggtcaaaaacaatg 27578283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 39669962 - 39669918
Alignment:
Q  421 atgacaactttgattacaactttatttttctcttttcttattggt 465  Q
    |||||||||||||| |||||||||||||||||| || ||||||||    
T  39669962 atgacaactttgatgacaactttatttttctctatttttattggt 39669918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 49189105 - 49189181
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||| | |||| ||| |||| |||| || | ||||||||||| |||||    
T  49189105 tgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatg 49189181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 50777312 - 50777392
Alignment:
Q  395 agtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||| |||||| |||||||||| || ||||||| |||| | ||||| || ||||||||| ||||||||||| |||| ||||    
T  50777312 agtaatgatatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaat 50777392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 468
Target Start/End: Complemental strand, 7420818 - 7420743
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaa 468  Q
    |||||| |||||| ||||||   ||||| |||||||||| |  |||||||| || |||||||||||||||||||||    
T  7420818 agagtaatgatatttgtacaattatttcgtgacaacttttaggacaacttttttcttctcttttcttattggtcaa 7420743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 36669271 - 36669334
Alignment:
Q  407 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||| ||||||| ||||||||||||  | ||||| || ||||||||| ||||||||||||||||    
T  36669271 tgtaaatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaa 36669334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 427
Target Start/End: Complemental strand, 11812531 - 11812497
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaa 427  Q
    ||||||||||||||||||||| |||||||||||||    
T  11812531 agagtagtgatatatgtacattcatttcatgacaa 11812497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 46902787 - 46902709
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttattttt-ctcttttcttattggtcaaaa 470  Q
    ||||||||||||| |||||||||| || ||||||| |||  | |||||||| ||||| |||| ||||||||||| ||||    
T  46902787 agagtagtgatatttgtacatccaattgatgacaattttagtgacaactttttttttcctctcttcttattggtaaaaa 46902709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 470
Target Start/End: Original strand, 3291312 - 3291389
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||| |||||||||||| |||||||| ||| || | ||| || ||| ||||| ||||| ||||||||||    
T  3291312 agagtaatgatatttgtacatccattccatgacaattttaatgataaccttgtttctctctcttctttttggtcaaaa 3291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 453
Target Start/End: Complemental strand, 5383936 - 5383883
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctct 453  Q
    |||||| ||||||||||||| || ||||||||| | |||||||| |||||||||    
T  5383936 tgatatttgtacatccatttaattacaactttggtgacaactttgtttttctct 5383883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 5959559 - 5959518
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgatt 435  Q
    |||||||||||| |||||||||| || |||||||||||||||    
T  5959559 gagtagtgatatttgtacatccaattgatgacaactttgatt 5959518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 21154405 - 21154357
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaacttt 443  Q
    ||||||||||||||||||| |||||| || ||||||||||| ||||||||    
T  21154405 gagtagtgatatatgtacaaccatttgat-acaactttgatgacaacttt 21154357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 387 - 476
Target Start/End: Original strand, 2193690 - 2193779
Alignment:
Q  387 taaactagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| |||||||||| || |||||||||||||| ||||  || ||||||||| |||||||||||||||| |||||    
T  2193690 taaacttgagtagtgatatttgtacatccaattgatgacaactttgatgacaatcttgtttttctctcttcttattggtcaaaaacaatg 2193779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 19720529 - 19720611
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||| || ||| |||||||| | ||||||||||| |||||    
T  19720529 gagtagtgatatatgtacatccatttgaagacaactttgatgacaaccttgtttctctcttttataattggtcaaaaacaatg 19720611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 32365555 - 32365637
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||| |||| |||| ||||||||| | ||| |||||||||||| || ||||||||||||| |||||    
T  32365555 gagtagtgatatatgtacatctattttatgataactttgatgataacattatttttctctctttttattggtcaaaaacaatg 32365637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 391 - 476
Target Start/End: Original strand, 20632533 - 20632618
Alignment:
Q  391 ctagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||| |||||||||| || ||||||| |||| | |||||||||||||| ||| ||| |||||||||||| |||||    
T  20632533 ctagagtagtgatatttgtacatccaattgatgacaattttggtgacaactttatttttttctcttcctattggtcaaaaacaatg 20632618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 8026658 - 8026734
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  8026658 tgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 8026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 24235497 - 24235421
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||||||||||||||||  | |||| |||| |||||||| |||||||||||||||| |||||    
T  24235497 tgatatttgtacatccatttcatgacaactttagtgacaattttaattttctctcttcttattggtcaaaaacaatg 24235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 44368096 - 44368172
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||||||||||||||||  | ||||| |||||||||||| |||||||| ||||||| |||||    
T  44368096 tgatatttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttatttgtcaaaaacaatg 44368172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 13267366 - 13267448
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||| ||| ||||||| ||||||||||| | |||||| ||||||||| |||||||||||||||| |||||    
T  13267366 agagtagtgatatttgtaaatcgatttcat-acaactttgatgaaaactttgtttttctctcttcttattggtcaaaaacaatg 13267448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 32079293 - 32079210
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| ||||||| |||||||| ||||||||  | ||||| || ||||||||||||||||||| |||||| |||||    
T  32079293 agagtagtgatatttgtacatacatttcataacaactttagtgacaaccttgtttttctcttttcttattgatcaaaaacaatg 32079210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 15638313 - 15638231
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||| |||||||||| ||||| |||||    
T  15638313 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggacaaaaacaatg 15638231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 31833117 - 31833191
Alignment:
Q  401 gatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    ||||||||||||||||||| |||| | ||||||| | |||||||||||| |||||| ||||||||||||| ||||    
T  31833117 gatatatgtacatccattttatgatatctttgatgataactttatttttttctttttttattggtcaaaaacaat 31833191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 5208221 - 5208297
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  5208221 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 5208297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 9032957 - 9032881
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||||||| ||||||||  | ||||| || |||||||||||| ||||||||||||| |||||    
T  9032957 tgatatttgtacatccatttcattacaactttagtgacaaccttgtttttctctttttttattggtcaaaaacaatg 9032881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 27001303 - 27001379
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  27001303 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 27001379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 33483992 - 33484076
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||| |||||| |||||||||| || |||||||||||| | ||||| ||| |||||||| ||||||||| |||||| |||||    
T  33483992 tagagtaatgatatttgtacatccaattgatgacaactttggtgacaaccttacttttctctcttcttattgatcaaaaacaatg 33484076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 47106088 - 47106012
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  47106088 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 47106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 53662336 - 53662412
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||||||||||||||  | | || ||| ||||||||| |||||||| ||||||| |||||    
T  53662336 tgatatatgtacatccatttcatgacaactttagtgataattttgtttttctctcttcttattagtcaaaaacaatg 53662412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 18568702 - 18568785
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||| ||  |||||| | |||||||||||||||| |||||    
T  18568702 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattggtcaaaaacaatg 18568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 466
Target Start/End: Complemental strand, 11012309 - 11012236
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 466  Q
    |||||||||||||||||||||  ||| |  ||||||||||||| ||||||||  |||||||||||||||||||||    
T  11012309 tagagtagtgatatatgtacaatcatatg-tgacaactttgatgacaactttcattttctcttttcttattggtc 11012236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 20056565 - 20056484
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||  ||  |||||||| |||||||||||||||| ||||    
T  20056565 gagtagtgatatttgtacatccaattgatgacaactttggtgacaatcttgcttttctctcttcttattggtcaaaaacaat 20056484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 3223166 - 3223090
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||| ||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  3223166 tgatatttgtacatccattccatgaaaactttagtgacaaccttctttttctctcttcttattggtcaaaaacaatg 3223090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 51377187 - 51377263
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| | ||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  51377187 tgatatttgtacatccattccttgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 51377263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 397 - 476
Target Start/End: Original strand, 36728513 - 36728592
Alignment:
Q  397 tagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||| |  ||||||| || |||||||||||| | |||||||| ||||||||| ||||||||||| |||| |||||    
T  36728513 tagtgatatttacacatccaattgatgacaactttggtgacaactttgtttttctctcttcttattggtaaaaaacaatg 36728592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 421 - 476
Target Start/End: Original strand, 46480421 - 46480476
Alignment:
Q  421 atgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||| || |||| |||||||||||||||| ||||||||||||| |||||    
T  46480421 atgacaactttaatgacaattttatttttctctttttttattggtcaaaaacaatg 46480476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 1796541 - 1796472
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||||||| ||||||||||||  | ||| |||| ||||||||| ||||||||||||||||    
T  1796541 tgatatttgtacatccattccatgacaactttagtgaca-ctttgtttttctctcttcttattggtcaaaa 1796472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 15515967 - 15515885
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||| ||||| |||| |  ||||||||||| ||||| || ||||||||  || ||||||||||||| |||||    
T  15515967 gagtagtgatatatgaacatctatttgaaaacaactttgatgacaaccttgtttttctcactttttattggtcaaaaacaatg 15515885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 22920159 - 22920240
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||| ||||||||  ||||   |||||||| || |||||||| ||||||||| || | ||||||||||||||||    
T  22920159 gagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattggtcaaaatcaat 22920240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 475
Target Start/End: Complemental strand, 22971640 - 22971559
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||| ||||||||  ||||   |||||||| || |||||||| ||||||||| || | ||||||||||||||||    
T  22971640 gagtagtgatatttgtacatctttttctaaacaacttttatgacaactttgtttttctctattttgattggtcaaaatcaat 22971559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 32901514 - 32901430
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||| |||||||||| || |||| || |||| | ||||  || ||||||||| || ||||||||||||| |||||    
T  32901514 tagagtagtgatatttgtacatccaattgatgataattttggtgacaatcttgtttttctctctttttattggtcaaaaacaatg 32901430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 37022438 - 37022362
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||||||||||||||||  | | ||  || ||||||| |||| ||||||||||||| |||||    
T  37022438 tgatatttgtacatccatttcatgacaactttagtgataatcttgtttttctttttttttattggtcaaaaacaatg 37022362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 51224732 - 51224808
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||| | |||| ||| |||| |||| || | ||||||||||| |||||    
T  51224732 tgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatg 51224808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 56025433 - 56025357
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||| ||||| |||||||||||| | ||||||||  |||||||| || | ||||||||||| |||||    
T  56025433 tgatatttgtacattcatttaatgacaactttggtgacaactttgattttctctcttttgattggtcaaaaacaatg 56025357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 475
Target Start/End: Original strand, 4514152 - 4514234
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| |||||||||||||| | ||| ||||||||||||||| |||| |||  |||||||| |||| ||||||| ||| ||||    
T  4514152 tagagtggtgatatatgtacaactatt-catgacaactttgatgacaattttcattttctctcttctcattggtccaaaacaat 4514234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 475
Target Start/End: Complemental strand, 13182516 - 13182433
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    ||||||| |||||| |||||||| | || |||||||||||||| | ||  || |||||||||||| |||||||| |||| ||||    
T  13182516 tagagtaatgatatttgtacatcaaattgatgacaactttgatgataatcttgtttttctctttttttattggttaaaaacaat 13182433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 35824006 - 35824088
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||||||||| |  |||||||||||  ||| | |  ||||||| |||||||| |||||||| |||||    
T  35824006 agagtagtgatatatgtacatccatttaaaaacaactttgatgtcaa-tcttgttttctcatttcttataggtcaaaaacaatg 35824088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 427
Target Start/End: Original strand, 40721862 - 40721897
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaa 427  Q
    |||||||||||||||||||||||||||| |||||||    
T  40721862 tagagtagtgatatatgtacatccatttgatgacaa 40721897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 476
Target Start/End: Complemental strand, 41495193 - 41495114
Alignment:
Q  397 tagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||| |||| ||| | || |||| || |||| | |||||||| ||||||||| |||||||||||||||| |||||    
T  41495193 tagtgatatttgtatatctaattgatgataattttggtgacaactttgtttttctctcttcttattggtcaaaaacaatg 41495114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 538 - 576
Target Start/End: Complemental strand, 13252565 - 13252527
Alignment:
Q  538 acaaaatgattatataaatatcatttctcaatgagatat 576  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  13252565 acaaaatgattatataaatatcatttctcagttagatat 13252527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 34260011 - 34259933
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    ||||||| |||||| |||||| ||||||  ||||||||||  | ||||  || ||||||||| ||||||||||||||||    
T  34260011 tagagtaatgatatttgtacaaccatttggtgacaacttttgtgacaaacttctttttctctcttcttattggtcaaaa 34259933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 53384238 - 53384311
Alignment:
Q  402 atatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||| ||||||||||||| |||| ||||||  | |||| ||| ||||||||| |||||||||||||||| |||||    
T  53384238 atatttgtacatccattttatgataactttagtgacaa-tttgtttttctctcttcttattggtcaaaaacaatg 53384311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 470
Target Start/End: Original strand, 42177937 - 42178014
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||| |||||||| |||| || || || |||| ||||||| | |||||||| ||||||||| ||||||||||| ||||    
T  42177937 agagcagtgatatttgtatattcaattgatgataactttggtaacaactttgtttttctctcttcttattggttaaaa 42178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 5e-18; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 14914553 - 14914471
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||||||||||||||| | ||||||||| |||||||| ||||| ||| |||||||||||||||| |||||    
T  14914553 agagtagtgatatttgtacatccatttcat-ataactttgatgacaactttgtttttatctcttcttattggtcaaaaacaatg 14914471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 12401362 - 12401293
Alignment:
Q  407 tgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||||||||||||||  | ||||| |||||||||||| |||||||||||||||| |||||    
T  12401362 tgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatg 12401293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 17489532 - 17489449
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||  || ||||||||| |||||||||||||||| |||||    
T  17489532 agagtagtgatatttgtacatccaattgatgacaactttggtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 17489449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 18638729 - 18638801
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 466  Q
    |||||||||||||||||||| ||||||   |||||||||||| ||||||||  |||||||||||||||||||||    
T  18638729 agagtagtgatatatgtacaaccatttgg-gacaactttgatgacaacttttattttctcttttcttattggtc 18638801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 9594655 - 9594579
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| |||||| ||||| |||||||||||||||| |||||    
T  9594655 tgatatttgtacatccattccatgacaactttagtgacaaccttatttctctctcttcttattggtcaaaaacaatg 9594579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 15622221 - 15622145
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  15622221 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 15622145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 30574271 - 30574347
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| |||||||| |||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  30574271 tgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 30574347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 33823588 - 33823664
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  33823588 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 33823664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 8959344 - 8959261
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||||||||| || ||||||||||||   ||||| || ||||||||| || ||||||||||||| |||||    
T  8959344 agagtagtgatatttgtacatccaattgatgacaactttggcgacaaccttgtttttctctctttttattggtcaaaaacaatg 8959261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 15917920 - 15917995
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| |||||||||||| ||||||||||||    |||||||||||| ||||| |||||||||||||||| ||||    
T  15917920 tgatatttgtacatccattccatgacaactttagcgacaactttatttctctctcttcttattggtcaaaaacaat 15917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 3263402 - 3263472
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| ||||||||||||||||    
T  3263402 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaa 3263472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 4292968 - 4292890
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    ||||||| |||||| || |||| ||||| ||||||| |||| | |||||||| ||||||||| ||||||||||||||||    
T  4292968 tagagtaatgatatttggacattcatttgatgacaattttgttgacaactttgtttttctctattcttattggtcaaaa 4292890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 7077233 - 7077303
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| ||||||||| || | |||||||||||    
T  7077233 tgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtcaaaa 7077303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 12512970 - 12512894
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  12512970 tgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 12512894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 393 - 476
Target Start/End: Original strand, 41984168 - 41984251
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||||||  | || |||||||||||| | |||| ||||||||| ||| ||||||||| |||||| |||||    
T  41984168 agagtagtgatatttgtacatttaattgatgacaactttggtgacaattttatttttttctcttcttattgatcaaaagcaatg 41984251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 9596708 - 9596784
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||| |||| ||||||||||||  | ||||  || ||||||||| |||||||||||||||| |||||    
T  9596708 tgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatg 9596784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 11464017 - 11464093
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||| ||||||||  | ||||| || ||||||||| || ||||||||||||| |||||    
T  11464017 tgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatg 11464093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 22920386 - 22920462
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||| ||| |||||||||| |  | ||||| || ||||||||| |||||||||||||||| |||||    
T  22920386 tgatatttgtacatctattacatgacaactatagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 22920462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 8725333 - 8725376
Alignment:
Q  423 gacaactttgattacaactttatttttctcttttcttattggtc 466  Q
    |||||||||||| ||||||||  |||||||||||||||||||||    
T  8725333 gacaactttgatgacaactttcattttctcttttcttattggtc 8725376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 25345515 - 25345440
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| |||||||||||| ||| |||| |||  | ||||  |||||||||||| |||||||||||||||| ||||    
T  25345515 tgatatttgtacatccattccataacaattttagtgacaatcttatttttctctcttcttattggtcaaaaacaat 25345440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 463
Target Start/End: Original strand, 36548274 - 36548337
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattg 463  Q
    |||||| ||||||||||| | |||||||||||||| ||||| || ||||||||| || ||||||    
T  36548274 tgatatttgtacatccatctaatgacaactttgatgacaaccttgtttttctctatttttattg 36548337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 300
Target Start/End: Complemental strand, 2239226 - 2239196
Alignment:
Q  270 ttgcaagatgtgaggtgtgttcttgaactta 300  Q
    |||||||||||||||||||||||||||||||    
T  2239226 ttgcaagatgtgaggtgtgttcttgaactta 2239196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 3722965 - 3723046
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||| ||||||||||||| ||||||   |||||||||||| ||||||||  |||||||| || ||||||||| ||| |||||    
T  3722965 gagtaatgatatatgtacaaccatttgg-gacaactttgatgacaactttcattttctctctttttattggtccaaaacaatg 3723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 432
Target Start/End: Original strand, 14070499 - 14070537
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttg 432  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  14070499 gagtagtgatatttgtacatccatttgatgacaactttg 14070537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 16143674 - 16143604
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    ||||||||||||||| |||| |||||||||||||| ||||   | | |||||||  |||||||||||||||    
T  16143674 tgatatatgtacatctatttaatgacaactttgatgacaatcatgtgtttctctcatcttattggtcaaaa 16143604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 16292138 - 16292219
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||||||||||| ||| || |||||||||||||  |||||| |  |||||||  || ||||||||||||| ||||    
T  16292138 agagtagtgatatatgtacaacca-ttgatgacaactttgaagacaactattattttctcgctttttattggtcaaaaacaat 16292219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 32634885 - 32634815
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||||||| |||||||| |||  | | || ||| ||||||||||||||||||||| ||||    
T  32634885 tgatatttgtacatccattccatgacaattttagtgataattttgtttttctcttttcttattggtaaaaa 32634815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 14648062 - 14648021
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgat 434  Q
    |||||||||||||||| |||||||||| | ||||||||||||    
T  14648062 agagtagtgatatatgaacatccatttgaagacaactttgat 14648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 37385120 - 37385202
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||| || || ||||||||||||||||||||||| ||||    
T  37385120 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgttcttctcttttcttattggtcaaaaacaat 37385202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 10014841 - 10014925
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||||||| |||||||||| || |||||||||||| | |||| ||| ||||||||| || ||||||||||||| |||||    
T  10014841 tagagtagtgatatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtcaaaaacaatg 10014925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 26041487 - 26041411
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  26041487 tgatatttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 26041411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 30864311 - 30864387
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || |||||||||||||||||||||||||| |||||    
T  30864311 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctcttttcttattggtcaaaaacaatg 30864387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 44511316 - 44511240
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||  | |||| ||| |||||||||||||||||||||||||| |||||    
T  44511316 tgatatttgtacatccattttatgacaactttagtgacaattttgtttttctcttttcttattggtcaaaaacaatg 44511240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 393 - 475
Target Start/End: Original strand, 37149362 - 37149444
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||||||||||||| |||||| ||||||||| || ||||| || ||||||| | ||||||||||| |||| ||||    
T  37149362 agagtagtgatatatgtacatctatttcaagacaacttttatgacaaccttgtttttctttcttcttattggtaaaaaacaat 37149444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 394 - 476
Target Start/End: Complemental strand, 42431906 - 42431824
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||| |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  42431906 gagtaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 42431824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 27164731 - 27164807
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| |||||||| |||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  27164731 tgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 27164807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 393 - 476
Target Start/End: Complemental strand, 8742567 - 8742484
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||| |||||||||| || |||||||||||| | ||||| || ||||||||| ||||||||| ||| || |||||    
T  8742567 agagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattgatcataaacaatg 8742484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 33050360 - 33050285
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||| |||||||||||||||||||||||||  | ||||| || ||| ||||| |||||||||||||||| ||||    
T  33050360 tgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaat 33050285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 1838347 - 1838423
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||||||||| |||||||||| || |||||||||||| | ||||| || ||||| ||| ||||||||| ||||||    
T  1838347 gagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttttctcttcttattgatcaaaa 1838423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 17500881 - 17500798
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||| ||||||   |||||||||||| | ||||||  |||||||| |||||||||||| ||| |||||    
T  17500881 tagagtagtgatatatgtacaaccatttgg-gacaactttgatgataactttcattttctctcttcttattggtccaaaacaatg 17500798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 476
Target Start/End: Original strand, 17552333 - 17552416
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||||||||||||||||||| ||||||   |||||||||||| | ||||||  |||||||| |||||||||||| ||| |||||    
T  17552333 tagagtagtgatatatgtacaaccatttgg-gacaactttgatgataactttcattttctctcttcttattggtccaaaacaatg 17552416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 49089053 - 49089124
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 466  Q
    ||||||||||||||||||| | ||||| ||||||||||||| ||||||||  |||||||| |||| |||||||    
T  49089053 gagtagtgatatatgtacaacaatttc-tgacaactttgatgacaactttcattttctctcttctcattggtc 49089124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 476
Target Start/End: Complemental strand, 39369469 - 39369403
Alignment:
Q  410 acatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||||||| | |||||||||  | |||||||| ||||||||||||||||||||| |||| |||||    
T  39369469 acatccatttaaggacaactttagtgacaactttgtttttctcttttcttattggttaaaaacaatg 39369403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 8326309 - 8326232
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||| |||||||||||||||| ||||||||  | ||||   ||||||||||| ||||||||| ||||||    
T  8326309 agagtaatgatatttgtacatccatttcataacaactttagtgacaatcgtatttttctctcttcttattgatcaaaa 8326232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 476
Target Start/End: Complemental strand, 1790132 - 1790092
Alignment:
Q  436 acaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  1790132 acaaccttatgtttctcttttcttattggtcaaaatcaatg 1790092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 2346953 - 2347029
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||| ||||| |||||||||||  | ||||| |||||||||| | || ||||||||||||| |||||    
T  2346953 tgatatttgtacattcattttatgacaactttagtgacaaccttatttttctttcttgttattggtcaaaagcaatg 2347029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 38978668 - 38978593
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||| |||||||||||||||  | ||||| || ||||||||| |||||||| ||||||| |||||    
T  38978668 tgatatttgtacatcc-tttcatgacaactttagtgacaaccttgtttttctctcttcttatttgtcaaaaacaatg 38978593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 48057391 - 48057467
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||| |||| |||||| ||||  | |||| ||| ||||||||| |||||||||||||||| |||||    
T  48057391 tgatatttgtacatctatttgatgacatctttagtgacaattttgtttttctctcttcttattggtcaaaaacaatg 48057467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 428
Target Start/End: Complemental strand, 1790162 - 1790128
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaac 428  Q
    ||||||||||||||||||||| |||||||||||||    
T  1790162 gagtagtgatatatgtacatcaatttcatgacaac 1790128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 19880127 - 19880197
Alignment:
Q  402 atatatgtacatccattt-catgacaactttgattacaactttatttttctcttttcttattggtcaaaat 471  Q
    |||| ||||||||||||| ||||||||||||  | ||||  |||||||||||| ||||||| |||||||||    
T  19880127 atatttgtacatccatttgcatgacaactttagtgacaatcttatttttctctcttcttatgggtcaaaat 19880197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 476
Target Start/End: Original strand, 25614709 - 25614791
Alignment:
Q  394 gagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||| |||||| |||||||| | || ||||||| |||| | ||||| || ||||||||| ||||||||||| |||| |||||    
T  25614709 gagtaatgatatttgtacatctaattgatgacaattttggtgacaaccttgtttttctctcttcttattggtaaaaaacaatg 25614791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 30201436 - 30201366
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||| ||||  ||||||||||| || ||||  |||||||||||| || |||||||||||||    
T  30201436 tgatatttgtacatacattctatgacaactttaatgacaatcttatttttctctctttttattggtcaaaa 30201366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 392 - 470
Target Start/End: Original strand, 42476454 - 42476532
Alignment:
Q  392 tagagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||| |||||||||| || ||||||||||||   ||||| || ||||| ||| || |||||||||||||    
T  42476454 tagagtggtgatatttgtacatccaattgatgacaactttggcgacaaccttgtttttttctctttttattggtcaaaa 42476532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 1390 - 1466
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| |||||||| |||  | |||||||| ||||||||| |||||||||||||||| |||||    
T  1390 tgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatg 1466  T

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Target: scaffold0172 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 17152 - 17076
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| ||| ||||| |||| ||||||||||| |||||    
T  17152 tgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttctgattggtcaaaaacaatg 17076  T

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Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 88985 - 88909
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||| |||||| ||||||  | ||||| |||||||| |||||||||||||||||||| |||||    
T  88985 tgatatttgtacatccatctcatgataactttagtgacaaccttatttttttcttttcttattggtcaaaaacaatg 88909  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 147150 - 147226
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| |||||||||||||||| |||||    
T  147150 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 147226  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 249036 - 249112
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || ||||||||| ||||||||| |||||| |||||    
T  249036 tgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatg 249112  T

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Target: scaffold0618 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 3538 - 3468
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| ||||||| ||||||| |||||||||  | ||||| |||||||||| | ||||||||||||||||    
T  3538 tgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaa 3468  T

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Target: scaffold0576 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 476
Target Start/End: Complemental strand, 9607 - 9531
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    |||||| ||||||||||||| |||||||||||| | |||||||| |||| |||| || | |||||| |||| |||||    
T  9607 tgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatg 9531  T

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Target: scaffold0193 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 24849 - 24774
Alignment:
Q  401 gatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaatg 476  Q
    ||||| |||||||| ||||||||| || |||  | ||||| |||||||||||| ||||||||||| |||| |||||    
T  24849 gatatttgtacatctatttcatgataattttagtgacaaccttatttttctctcttcttattggttaaaaacaatg 24774  T

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Target: scaffold0121 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 29960 - 29897
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattg 463  Q
    |||||| ||||||||||||| |||||||||||  ||||||| || ||||||||| || ||||||    
T  29960 tgatatttgtacatccatttaatgacaactttagttacaaccttgtttttctctctttttattg 29897  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 31194 - 31264
Alignment:
Q  400 tgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaa 470  Q
    |||||| |||||||| ||| ||||| || |||  | |||||||| ||||||||| ||||||||||||||||    
T  31194 tgatatttgtacatctattacatgataattttagtgacaactttgtttttctctgttcttattggtcaaaa 31264  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 475
Target Start/End: Complemental strand, 156089 - 156008
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtcaaaatcaat 475  Q
    |||||||||||||||||||| ||||||   |||||||||||| |||||| |  |||||||| |||| ||||||| ||| ||||    
T  156089 agagtagtgatatatgtacaaccattt-gggacaactttgatgacaactctcattttctctcttctcattggtccaaaacaat 156008  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 393 - 466
Target Start/End: Complemental strand, 16574 - 16502
Alignment:
Q  393 agagtagtgatatatgtacatccatttcatgacaactttgattacaactttatttttctcttttcttattggtc 466  Q
    |||||||||||||||  ||| |||||| |||||||||||| | ||||||||  |||||||| |||| |||||||    
T  16574 agagtagtgatatattgacaaccattt-atgacaactttgttgacaacttttattttctctattctcattggtc 16502  T

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