View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11096_high_16 (Length: 244)
Name: NF11096_high_16
Description: NF11096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11096_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 232
Target Start/End: Original strand, 525902 - 526117
Alignment:
| Q |
17 |
cctcttctcaggcttcaccatcaccacctcctaagtaataatcttctatcatattcaaactcattttgcatgtgttttttcattctcttttaggacaacc |
116 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
525902 |
cctcttctcaggcttcaccatcaccacctcctaactaataatcttatatcatattcaaactcatttttcatgtgttttttcattctcttttaggacaacc |
526001 |
T |
|
| Q |
117 |
tcttaaaccatagcagttccataattcccttcccacacccccacccacttgttttttagtttcttatactacatgacccacttacatatatgttccaatc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
526002 |
tcttaaaccatagcagttccataattcccttcccacacccccacccacttgttttttagtttcttatactacatgacccacttacatatatgttccaatc |
526101 |
T |
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| Q |
217 |
gcaacgtctctctgct |
232 |
Q |
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|||||||||||||||| |
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| T |
526102 |
gcaacgtctctctgct |
526117 |
T |
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