View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11096_low_10 (Length: 321)
Name: NF11096_low_10
Description: NF11096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11096_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 528169 - 527857
Alignment:
| Q |
1 |
taaaagaaaaactaaagcttagtttgagatcaaacaatatgaaagatgttgttagcgaataattaaggatgatttaatttaatgtacttacacgataaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
528169 |
taaaagaaaaactaaagcttagtttgagatcaaacaatatgaaagatgttgttagcgaataattaaggatgatttaatttaatgtacttacacggtaaaa |
528070 |
T |
|
| Q |
101 |
gttaatcataaatgttggatcattattttaaattttttgcagggcatatctattttgaaaatcgtaataaatgatgaggtacctctttcctaaggagagc |
200 |
Q |
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|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
528069 |
gttaatcataaatgttggatcattatttttaattttttgcagggcatatctattttgaaaatcgtaataaatgatgaggtacctctttcctaaggagagc |
527970 |
T |
|
| Q |
201 |
attctccagtcttagctgctgctcctcatgtgacatttccccagcgttagaggaacttccacatactttgcatgtggtactaattgcccccttgtatcta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
527969 |
attctccagtcttagctgctgctcctcatgtgacatttccccagcgttagaggaacttccacatactttgcatgtggtactaattgcccccttgtatcta |
527870 |
T |
|
| Q |
301 |
tcaagttcatctc |
313 |
Q |
| |
|
||||||||||||| |
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| T |
527869 |
tcaagttcatctc |
527857 |
T |
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