View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11098_low_2 (Length: 616)

Name: NF11098_low_2
Description: NF11098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11098_low_2
NF11098_low_2
[»] chr4 (14 HSPs)
chr4 (11-602)||(25928055-25928651)
chr4 (165-247)||(35675241-35675323)
chr4 (163-236)||(52021020-52021092)
chr4 (163-239)||(50514662-50514738)
chr4 (165-239)||(20456553-20456627)
chr4 (165-239)||(30475409-30475483)
chr4 (165-247)||(52341577-52341659)
chr4 (163-239)||(1457584-1457660)
chr4 (172-239)||(30617933-30618000)
chr4 (53-82)||(26191741-26191770)
chr4 (165-253)||(27544478-27544564)
chr4 (163-208)||(32584568-32584613)
chr4 (171-208)||(35927331-35927368)
chr4 (163-247)||(966558-966642)
[»] chr8 (8 HSPs)
chr8 (163-248)||(4308784-4308869)
chr8 (165-245)||(7444256-7444336)
chr8 (184-247)||(5300199-5300262)
chr8 (165-247)||(20212440-20212522)
chr8 (165-239)||(39972203-39972277)
chr8 (165-245)||(7532765-7532843)
chr8 (165-205)||(17320005-17320045)
chr8 (164-208)||(30351606-30351650)
[»] chr2 (6 HSPs)
chr2 (163-247)||(2239558-2239642)
chr2 (170-236)||(13909326-13909392)
chr2 (185-245)||(41890182-41890242)
chr2 (165-208)||(34220697-34220740)
chr2 (165-247)||(2136412-2136494)
chr2 (163-232)||(3454747-3454815)
[»] chr7 (10 HSPs)
chr7 (165-247)||(16082483-16082565)
chr7 (165-247)||(32204158-32204240)
chr7 (165-248)||(4686094-4686177)
chr7 (165-232)||(6548521-6548588)
chr7 (165-239)||(27053544-27053618)
chr7 (165-239)||(29687460-29687534)
chr7 (165-247)||(44296952-44297034)
chr7 (163-250)||(18800197-18800284)
chr7 (165-220)||(42222224-42222279)
chr7 (165-208)||(43189688-43189731)
[»] chr3 (12 HSPs)
chr3 (165-247)||(34060817-34060899)
chr3 (163-239)||(8847501-8847577)
chr3 (164-239)||(45899594-45899669)
chr3 (165-227)||(34750308-34750370)
chr3 (163-236)||(271215-271288)
chr3 (174-247)||(11675289-11675362)
chr3 (165-208)||(18838-18881)
chr3 (165-208)||(18979-19022)
chr3 (165-239)||(35306316-35306390)
chr3 (165-239)||(51817363-51817437)
chr3 (167-208)||(39974859-39974900)
chr3 (165-205)||(49976192-49976232)
[»] chr1 (6 HSPs)
chr1 (163-208)||(41898905-41898950)
chr1 (165-253)||(51424127-51424215)
chr1 (169-247)||(40920161-40920239)
chr1 (163-208)||(17402963-17403008)
chr1 (165-239)||(4940788-4940862)
chr1 (163-245)||(34644143-34644225)
[»] chr6 (4 HSPs)
chr6 (163-239)||(31220376-31220452)
chr6 (165-239)||(7274265-7274339)
chr6 (163-208)||(21186066-21186111)
chr6 (165-234)||(28014624-28014693)
[»] chr5 (7 HSPs)
chr5 (163-237)||(39335459-39335533)
chr5 (165-208)||(35945261-35945304)
chr5 (165-208)||(39069327-39069370)
chr5 (165-203)||(8987432-8987470)
chr5 (163-220)||(39693013-39693070)
chr5 (170-254)||(19894787-19894871)
chr5 (165-245)||(20184599-20184679)


Alignment Details
Target: chr4 (Bit Score: 487; Significance: 0; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 11 - 602
Target Start/End: Complemental strand, 25928651 - 25928055
Alignment:
Q  11 cagagacttgaacttatatttttgagagtcgtagacttggatttgttgcaacctttaattagtaatattaatcaatggaatatgatgaatgttgagaata 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  25928651 cagagacttgaacttatatttttgagagtcgtagacttagatttgttgcaacctttaattagtaatattaaccaatggaatatgctgaatgttgagaata 25928552  T
Q  111 aaattttatgataaaataacaaatgagttgcacgacatatatatgtgatgcttaaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaagg 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25928551 aaattttatgataaaataacaaatgagttgcacgacatatatatgtgatgcttaaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaacg 25928452  T
Q  211 caatacaaacttactacgtttggtttcctcaacaagtatcatacnnnnnnnnnnnnnaagaaagtaaattagcccactaaaattgactccgtaataacac 310  Q
    |||||||||| |||||||||||||||||||||||||||||| ||             |||||||||||||| ||||||||||||||||||||||||||||    
T  25928451 caatacaaacctactacgtttggtttcctcaacaagtatcacacttttttgttttttaagaaagtaaattaacccactaaaattgactccgtaataacac 25928352  T
Q  311 ttgttggcatttactttgcttcgaatttcaaatatgacttgaactcttgcacttttcttaaatgtgatcctttggggaatg----caatgaacatttctc 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||||||    
T  25928351 ttgttggcatttactttgcttcgaatttcaaatatgacttgaactcttgcacttttcttaaatgtgatcctttggggaatgaatgcaatga-catttctc 25928253  T
Q  407 catatat--cctataaactggcttaaaattctgatttaaattttacatataaagcattgtgatcccgcaaacgacctccacacacgaggttgaaccatca 504  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  25928252 catatatatcctataaactggcttaaaattctgatttaaattttacatataacgcattgtgatcccacaaacgacctccacacacgaggttgaaccatca 25928153  T
Q  505 acaaaattatacgaaccatcaactgtttacaactaccatctacatgtatttgtttttggtgcactgctagcaccatttttagatatgtgttagaattg 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25928152 acaaaattatacgaaccatcaactgtttacaactaccatctacatgtatttgtttttggtgcactgctagcaccatttttagatatgtgttagaattg 25928055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 35675241 - 35675323
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  |||| ||||| |||||| |||| ||| || |||||||    
T  35675241 aaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacatactacttttgattttcttaacaagt 35675323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 52021092 - 52021020
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggttt 236  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||  ||||||||||||| | | ||||||||    
T  52021092 taaaaaatgataaatttaactttttaaatgttaaaatattgttgaa-tcaatacaaacttatttcatttggttt 52021020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 50514662 - 50514738
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||||| |||||||| ||||||| |||||||| ||||||||  |||| ||||| | |||| |||||||||||    
T  50514662 taaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggtttcct 50514738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 20456627 - 20456553
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    |||||| ||||||||||  |||||||||||||||||||||||||  |||| ||||| | |||| |||| ||||||    
T  20456627 aaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaacatgctacttttgatttcct 20456553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 30475483 - 30475409
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||  |||| ||||| || ||| ||||| |||||    
T  30475483 aaaagtgataaatttaactttttaaatgtcaaaatattgttgaaaccaatgcaaacatattacttttggcttcct 30475409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 52341659 - 52341577
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||| ||||||||||||| ||||||| || ||||| ||||||||  |||| ||||| |||||  ||||||||||| |||||||    
T  52341659 aaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatgcaaacatactaattttggtttccttaacaagt 52341577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 1457584 - 1457660
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    |||||| |||| |||||||  ||||||| |||||||||||||||||  |||| |||||||| ||| |||| ||||||    
T  1457584 taaaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatgcaaacttattacttttgatttcct 1457660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 30618000 - 30617933
Alignment:
Q  172 atgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||||| ||||||| ||| |||||||||||||  |||| ||| | |||||| |||||||||||    
T  30618000 atgaatttaactttttaaaagttcaaatattgttgaatccaatgcaatcctactacttttggtttcct 30617933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 26191770 - 26191741
Alignment:
Q  53 ttgttgcaacctttaattagtaatattaat 82  Q
    ||||||||||||||||||||||||||||||    
T  26191770 ttgttgcaacctttaattagtaatattaat 26191741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 27544564 - 27544478
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagtatcata 253  Q
    ||||||||||||||| |  ||||||| ||||||||||||||||| |  |||||||  |||||| |||| ||| || ||||||| |||||    
T  27544564 aaaagtgatgaatttgaatttttaaaagttaaaatattgttgaatg--atacaaatctactacttttgattttctaaacaagtgtcata 27544478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 32584568 - 32584613
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||| ||||||| ||| ||||||| |||||||||||||||||    
T  32584568 taaaaagtaatgaattcaactttttaaaagttaaaatattgttgaa 32584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 35927331 - 35927368
Alignment:
Q  171 gatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  35927331 gatgaatttaactttttaaaagttaaaatattgttgaa 35927368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 966642 - 966558
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||||| | ||||||||||| |||||||  ||||||||||||||||  ||||  |||  |||||| |||| |||||| |||||||    
T  966642 taaaaaattatgaatttaactttttaaaaattaaaatattgttgaatccaatgaaaaactactacttttgatttccttaacaagt 966558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 4308869 - 4308784
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagta 248  Q
    |||||| ||||||||||||| || |||| ||||||||| |||||||  |||||||||| |||||  ||||||||||| ||||||||    
T  4308869 taaaaaatgatgaatttaactttataaaagttaaaatagtgttgaatccaatacaaacctactatttttggtttccttaacaagta 4308784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 7444336 - 7444256
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaa 245  Q
    ||||||| ||||||| | |||||||| |||||||||||||||||   ||| ||||| |||||| ||||||||||| |||||    
T  7444336 aaaagtggtgaatttgatgttttaaaagttaaaatattgttgaatctaatgcaaacctactacttttggtttccttaacaa 7444256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 5300262 - 5300199
Alignment:
Q  184 ttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    ||||||| || ||||||||||||||  |||| |||||||||||| ||||||||||| |||||||    
T  5300262 ttttaaaagtcaaaatattgttgaattcaatgcaaacttactacttttggtttccttaacaagt 5300199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 20212440 - 20212522
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||||||||||||||||  ||||||| |||||||||| ||||||  ||||  |||| | |||| ||||||||||| |||||||    
T  20212440 aaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaacaagt 20212522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 39972203 - 39972277
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||||||||| || ||||||| ||||||| |||||| ||  |||| ||||| |||||  |||||||||||    
T  39972203 aaaagtgatgaatttgactttttaaaagttaaaaaattgttcaattcaatgcaaacatactatttttggtttcct 39972277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 7532843 - 7532765
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaa 245  Q
    ||||||||||||||||   ||||||| |||||  ||||||||||  |||| ||||| |||||| ||||||||||| |||||    
T  7532843 aaaagtgatgaatttaggtttttaaaagttaa--tattgttgaatccaattcaaacctactacttttggtttccttaacaa 7532765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 17320005 - 17320045
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgtt 205  Q
    ||||| |||||||||||| ||||||| ||||||||||||||    
T  17320005 aaaagagatgaatttaactttttaaaagttaaaatattgtt 17320045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 30351650 - 30351606
Alignment:
Q  164 aaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    ||||||||| || |||||| ||||||| |||||||||||||||||    
T  30351650 aaaaagtgacgagtttaactttttaaaagttaaaatattgttgaa 30351606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 2239642 - 2239558
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||  |||||||||  |||||| |||||| | || |||||||    
T  2239642 taaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaatacaaatatactacttttggtattcttaacaagt 2239558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 13909326 - 13909392
Alignment:
Q  170 tgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggttt 236  Q
    ||||||||||| | ||||||||| |||||||||||||||   |||||||| ||||||| ||||||||    
T  13909326 tgatgaatttagctttttaaatgataaaatattgttgaatcaaatacaaatttactacttttggttt 13909392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 41890182 - 41890242
Alignment:
Q  185 tttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaa 245  Q
    |||||| |||||||||||||||||  |||| ||||| |||||| ||||||||||| |||||    
T  41890182 tttaaaagttaaaatattgttgaatccaatgcaaacctactacttttggtttccttaacaa 41890242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 34220697 - 34220740
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||||||||  ||||||| |||||||||||||||||    
T  34220697 aaaagtgatgaatttaagtttttaaaagttaaaatattgttgaa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 2136494 - 2136412
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||||||  |||||| || ||| ||| || ||||||||||||||  |||||||||| |||||  ||||||||||| |||||||    
T  2136494 aaaagtggagaatttgacttttgaaaagtgaaaatattgttgaatacaatacaaacctactaattttggtttccttaacaagt 2136412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 3454747 - 3454815
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttg 232  Q
    ||||||||||| | |||||| ||||||| || ||||||||||||||  ||||||||| ||||||| ||||    
T  3454747 taaaaagtgataactttaactttttaaaagt-aaaatattgttgaattcaatacaaaattactacttttg 3454815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 16082483 - 16082565
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||  |||| ||||| |||||| ||||| ||||| |||||||    
T  16082483 aaaattgatgaatttaacgttttaaaagttaagttattgttgaatccaatgcaaacatactacttttggattccttaacaagt 16082565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 32204240 - 32204158
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||  |||| |||| ||||||  |||| |||||| |||||||    
T  32204240 aaaagtgatgaatttaactttttaaaagttaaaatatttttgaatacaatgcaaatttactatctttgatttccttaacaagt 32204158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 4686094 - 4686177
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagta 248  Q
    ||||||||| |||||||| ||||||| ||||||| | |||||||  ||| ||||||||||||| | || |||||| ||||||||    
T  4686094 aaaagtgattaatttaactttttaaaagttaaaaaagtgttgaattcaagacaaacttactacttatgatttccttaacaagta 4686177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 6548588 - 6548521
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttg 232  Q
    |||| ||||||||||||| ||||||| ||||||||||||||| |  |||| |||||||||||| ||||    
T  6548588 aaaaatgatgaatttaactttttaaaagttaaaatattgttggatccaatgcaaacttactacttttg 6548521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 27053544 - 27053618
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||| |||||||| ||||||| || ||||||||||||||  |||| ||||| | |||| |||||||||||    
T  27053544 aaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacattctacttttggtttcct 27053618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 29687534 - 29687460
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||  |||| ||||| | |||| ||||| |||||    
T  29687534 aaaagtgatgaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttcct 29687460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 44296952 - 44297034
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||||||||||||||||  ||||||| |||||||||| ||||||  ||||  |||| | |||| ||||||||||| |||||||    
T  44296952 aaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaacaagt 44297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 18800197 - 18800284
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagtatc 250  Q
    |||| |||||| |||||||| |||||||  ||| ||||||||||||  || |||||||||||||| |||| ||| || ||||| ||||    
T  18800197 taaagagtgataaatttaactttttaaaaattacaatattgttgaatccattacaaacttactacttttgattttcttaacaaatatc 18800284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 42222279 - 42222224
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaac 220  Q
    ||||||||| |||||||| ||||||| || ||||||||||||||  ||||||||||    
T  42222279 aaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatacaaac 42222224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 43189688 - 43189731
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    ||||||||||||||| || ||||||| |||||||||||||||||    
T  43189688 aaaagtgatgaatttgactttttaaaagttaaaatattgttgaa 43189731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 34060817 - 34060899
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  |||| |||||  ||||| |||  |||||| |||||||    
T  34060817 aaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacaaactacttttaatttccttaacaagt 34060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 8847501 - 8847577
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||  ||||  |||| | |||| |||||||||||    
T  8847501 taaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaacaatgtaaacatgctacttttggtttcct 8847577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 45899594 - 45899669
Alignment:
Q  164 aaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||||||||||||  ||||||| || ||||||||||||||  ||||  |||| |||||| |||||||||||    
T  45899594 aaaaagtgatgaatttaaatttttaaaagtcaaaatattgttgaattcaatgtaaacatactacttttggtttcct 45899669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 34750308 - 34750370
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactac 227  Q
    |||||||||||||||||| ||||| |  ||||||||||||||||  |||||||||| ||||||    
T  34750308 aaaagtgatgaatttaactttttataaattaaaatattgttgaatccaatacaaacctactac 34750370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 271215 - 271288
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggttt 236  Q
    |||||| | |||||||| || ||||||| ||||||| |||||||||  |||||||||||| |||| ||||||||    
T  271215 taaaaaataatgaatttgactttttaaaagttaaaacattgttgaatccaatacaaactttctacttttggttt 271288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 11675362 - 11675289
Alignment:
Q  174 gaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    ||||||||| |||||||||| ||||||||||||||  |||| | ||| ||| || ||||||||||| |||||||    
T  11675362 gaatttaactttttaaatgtcaaaatattgttgaatccaatgctaacctaccacttttggtttccttaacaagt 11675289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 18838 - 18881
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||||||||| |||||||  ||||||||||||||||    
T  18838 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 18881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 18979 - 19022
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||||||||| |||||||  ||||||||||||||||    
T  18979 aaaagtgatgaatttaactttttaaaaattaaaatattgttgaa 19022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 35306390 - 35306316
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||| |||||||| ||||||| |||||||| || |||||  |||| ||||| | |||| |||||||||||    
T  35306390 aaaagtgataaatttaactttttaaaagttaaaatgttattgaaatcaatgcaaacatgctacttttggtttcct 35306316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 51817363 - 51817437
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||| |||||||| ||||||| || ||||||||||||||   ||||||||| | |||| ||||| |||||    
T  51817363 aaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacaaacatgctacttttggcttcct 51817437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 39974859 - 39974900
Alignment:
Q  167 aagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||||||| ||||||| ||||||||| |||||||    
T  39974859 aagtgatgaatttaactttttaaaagttaaaatagtgttgaa 39974900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 49976192 - 49976232
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgtt 205  Q
    |||||||||||||||||| ||||||| || |||||||||||    
T  49976192 aaaagtgatgaatttaactttttaaaagtcaaaatattgtt 49976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 41898905 - 41898950
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  41898905 taaaaagtgatgaatttaactttttaaaagttaaaatattgttgaa 41898950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 51424215 - 51424127
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagtatcata 253  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||  ||||  |||| || ||| ||||||||| | ||||||| |||||    
T  51424215 aaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaacatattacttttggtttctttaacaagtgtcata 51424127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 40920239 - 40920161
Alignment:
Q  169 gtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagt 247  Q
    ||||| |||||||| ||||||| |||||||||||||||||  |||| ||||   ||||| ||||||||||| |||||||    
T  40920239 gtgattaatttaactttttaaaagttaaaatattgttgaatccaatgcaaatccactacttttggtttccttaacaagt 40920161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 17403008 - 17402963
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||    
T  17403008 taaaaagtgatgaatttaactttttaaaagtcaaaatattgttgaa 17402963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 4940788 - 4940862
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||| |||||||| ||||||| || ||||||||||| ||  |||||||||| | |||  |||||||||||    
T  4940788 aaaagtgataaatttaactttttaaaagtcaaaatattgttaaaaccaatacaaacatgctatttttggtttcct 4940862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 34644225 - 34644143
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaa 245  Q
    |||||| |||||||||| ||  |||||| |||||||||||||||||  ||||  ||||||| ||  ||||||||||| |||||    
T  34644225 taaaaaatgatgaatttgactatttaaaagttaaaatattgttgaattcaatgtaaacttagtagttttggtttccttaacaa 34644143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 31220376 - 31220452
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    |||||||||||||||||||| ||||||| |||||||| || |||||   ||| ||||| |||||| |||||||||||    
T  31220376 taaaaagtgatgaatttaactttttaaaagttaaaatgttattgaataaaatgcaaacatactacttttggtttcct 31220452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 7274265 - 7274339
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcct 239  Q
    ||||||||| |||||||| ||||||| |||||||| ||||||||  |||||||||| |  ||| |||||||||||    
T  7274265 aaaagtgataaatttaacattttaaaagttaaaatgttgttgaaatcaatacaaacatgttacttttggtttcct 7274339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 21186066 - 21186111
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||    
T  21186066 taaaaagtgatgaatttaactttttaaaagttaaaatattattgaa 21186111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 28014693 - 28014624
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggt 234  Q
    |||| |||||| ||| || ||||||| |||||||||||||||||  |||| |||||||||| | ||||||    
T  28014693 aaaaatgatgagtttgactttttaaaagttaaaatattgttgaatccaatgcaaacttactgcatttggt 28014624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 39335533 - 39335459
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttc 237  Q
    |||||||||||||||||||| ||||||| || ||||| ||||||||  |||||||||| || ||  |||||||||    
T  39335533 taaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatacaaacataataattttggtttc 39335459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 35945304 - 35945261
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||    
T  35945304 aaaagtgataaatttaactttttaaatgttaaaatgttgttgaa 35945261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 39069327 - 39069370
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaa 208  Q
    |||||||||||||||||| ||||||| || ||||||||||||||    
T  39069327 aaaagtgatgaatttaacattttaaaagtcaaaatattgttgaa 39069370  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 8987470 - 8987432
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattg 203  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  8987470 aaaaatgatgaatttaacgttttaaaagttaaaatattg 8987432  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 39693070 - 39693013
Alignment:
Q  163 taaaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaac 220  Q
    |||||| |||| |||||| | ||||||| |||||||||||||||||  ||||||||||    
T  39693070 taaaaaatgataaatttatctttttaaaagttaaaatattgttgaaatcaatacaaac 39693013  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 19894871 - 19894787
Alignment:
Q  170 tgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaagtatcatac 254  Q
    ||||||||||||| ||||||| |||||||||||||| ||  |||| ||||| |  ||| |||| |||||| ||| ||| ||||||    
T  19894871 tgatgaatttaactttttaaaagttaaaatattgttaaatccaattcaaaccttatacttttgatttccttaacgagtgtcatac 19894787  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 20184599 - 20184679
Alignment:
Q  165 aaaagtgatgaatttaacgttttaaatgttaaaatattgttgaaggcaatacaaacttactacgtttggtttcctcaacaa 245  Q
    ||||||||||||||| || ||||||| ||||||| |||||||||   ||||||| | || ||| |||| |||||| |||||    
T  20184599 aaaagtgatgaatttcactttttaaaagttaaaacattgttgaatctaatacaatcatattacttttgatttccttaacaa 20184679  T

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