View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11099_low_14 (Length: 264)
Name: NF11099_low_14
Description: NF11099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11099_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 203
Target Start/End: Original strand, 36147027 - 36147171
Alignment:
| Q |
59 |
ttataataatacccgtcaataaactaaagaacagaagagtcttgtgttaatgagttgattaaaatgtgtgtgaagcaaatgacccaacaacaacaacagt |
158 |
Q |
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| T |
36147027 |
ttataataatagccgttaataaactaaagaacagaagagtcttgtgttaatgagttgattaaaatgtgtgtgaagcaaatgacccaacaacaacagtagt |
36147126 |
T |
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| Q |
159 |
atctccccaagcagagcaagacatcaataacaactcaacatcaac |
203 |
Q |
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| T |
36147127 |
atctccccaagcagagcaagacatgaataacaactcaacatcaac |
36147171 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36146964 - 36147008
Alignment:
| Q |
1 |
aaaaaatgtaatactcgagtagtagaaaaatggaagaagtaacta |
45 |
Q |
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| T |
36146964 |
aaaaaatgtaatattcgagtagtagaaaaatggaagaagtaacta |
36147008 |
T |
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