View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11101_high_10 (Length: 250)
Name: NF11101_high_10
Description: NF11101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11101_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 9 - 233
Target Start/End: Original strand, 20510916 - 20511142
Alignment:
| Q |
9 |
gttttgtttggttatcgtcattttatcatgaacttctaatttatttttcagacgcttcttcaaaataacgttaaataagcttatcattttctcttccatt |
108 |
Q |
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| T |
20510916 |
gttttgtttggttattgtcattttatcatgaacttctaatttatttttcagacgcttcttcaaaataacgttaaataagcttatcattttctcttccatt |
20511015 |
T |
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| Q |
109 |
tacatccttattatttcatataaatcggtctccatcgtgacga---ccaagttccaccaccatttttccaccttggagggtgcaaactgccatcaaatag |
205 |
Q |
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|| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
20511016 |
tatatccttattatttcatataaatcggtctacatcgtgacgacttccaagttccaccacca-ttttccaccttggagggtgcaaactgccatcaaatag |
20511114 |
T |
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| Q |
206 |
actgatttgttgtcgttcccatccatat |
233 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
20511115 |
actgatttgttgtcgttcccatccatat |
20511142 |
T |
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