View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11103_high_12 (Length: 245)
Name: NF11103_high_12
Description: NF11103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11103_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 38712896 - 38712674
Alignment:
| Q |
1 |
agtcccaaatcagtctcattatacaagtattagttattgtaaatttgtaaccaaactttttggtcaagaatcaagatagttaacttaccattcggtgtct |
100 |
Q |
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| T |
38712896 |
agtcccaaatcagtctcattatataagtattagttattgtaaatttgtaaccaaactttttggtcaaga-------tagttaacttaccattcggtgtct |
38712804 |
T |
|
| Q |
101 |
actctcctcttgatgaactcatccacaacctgcaaataataatgttttcccatcataaagacttggacgcatcaaactgaaagaacagcatataatagcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38712803 |
actctcctcttgatgaactcatccacaacctgcaaataataatgttttcccatcataaagacttggacgcatcaaactgaaagaacagcatataatagcc |
38712704 |
T |
|
| Q |
201 |
atatataatttgagcactatttgcacaaat |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
38712703 |
atatataatttgagcactatttgcacaaat |
38712674 |
T |
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