View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11103_low_2 (Length: 477)

Name: NF11103_low_2
Description: NF11103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11103_low_2
NF11103_low_2
[»] chr3 (73 HSPs)
chr3 (9-461)||(53735889-53736341)
chr3 (100-226)||(54775061-54775193)
chr3 (100-165)||(1395604-1395669)
chr3 (100-165)||(27792805-27792870)
chr3 (100-165)||(49586988-49587052)
chr3 (105-228)||(20669117-20669240)
chr3 (115-165)||(10357381-10357431)
chr3 (115-169)||(20143873-20143926)
chr3 (115-169)||(23269263-23269316)
chr3 (74-164)||(20192679-20192765)
chr3 (196-265)||(51130786-51130855)
chr3 (100-161)||(53457310-53457371)
chr3 (95-167)||(24605086-24605158)
chr3 (95-165)||(10101548-10101619)
chr3 (95-165)||(10212473-10212544)
chr3 (100-143)||(20173982-20174025)
chr3 (110-165)||(24235755-24235810)
chr3 (102-164)||(2321110-2321171)
chr3 (120-162)||(25195377-25195419)
chr3 (105-220)||(40122763-40122884)
chr3 (159-228)||(1816582-1816651)
chr3 (120-161)||(6241160-6241201)
chr3 (118-163)||(26990685-26990730)
chr3 (159-228)||(36887503-36887572)
chr3 (118-163)||(38462232-38462277)
chr3 (100-165)||(41028923-41028988)
chr3 (120-177)||(42808932-42808989)
chr3 (118-175)||(42809252-42809309)
chr3 (160-264)||(53952045-53952152)
chr3 (118-166)||(22232777-22232825)
chr3 (100-144)||(24413617-24413661)
chr3 (193-233)||(33883747-33883787)
chr3 (182-233)||(11040611-11040662)
chr3 (100-143)||(16790182-16790225)
chr3 (118-165)||(24887355-24887402)
chr3 (115-162)||(32663590-32663636)
chr3 (100-167)||(33307650-33307717)
chr3 (368-439)||(37273194-37273265)
chr3 (118-165)||(43116500-43116547)
chr3 (125-207)||(2825113-2825194)
chr3 (99-165)||(8007767-8007833)
chr3 (118-164)||(15304420-15304466)
chr3 (119-153)||(20267107-20267141)
chr3 (115-157)||(23952186-23952228)
chr3 (117-167)||(33307522-33307572)
chr3 (118-164)||(34954034-34954080)
chr3 (110-160)||(48364956-48365006)
chr3 (104-149)||(905058-905103)
chr3 (100-161)||(16790432-16790493)
chr3 (100-161)||(28283653-28283714)
chr3 (122-167)||(28306113-28306158)
chr3 (122-167)||(31337471-31337516)
chr3 (100-161)||(33434083-33434143)
chr3 (99-164)||(37788793-37788857)
chr3 (193-230)||(40321069-40321106)
chr3 (100-149)||(41159042-41159091)
chr3 (100-161)||(44374720-44374781)
chr3 (162-211)||(45535237-45535286)
chr3 (117-150)||(49254707-49254740)
chr3 (368-425)||(49772621-49772678)
chr3 (118-167)||(51278227-51278276)
chr3 (100-161)||(52413197-52413258)
chr3 (371-407)||(2606281-2606317)
chr3 (110-166)||(4990628-4990684)
chr3 (125-165)||(13481253-13481293)
chr3 (369-401)||(21865637-21865669)
chr3 (368-436)||(29600677-29600745)
chr3 (117-157)||(33882978-33883018)
chr3 (124-164)||(33965564-33965604)
chr3 (169-221)||(34414793-34414845)
chr3 (368-428)||(43115116-43115176)
chr3 (371-439)||(48588720-48588788)
chr3 (72-149)||(49546575-49546648)
[»] chr2 (69 HSPs)
chr2 (373-457)||(40145517-40145601)
chr2 (118-165)||(17952773-17952820)
chr2 (115-172)||(3458605-3458662)
chr2 (100-165)||(10143105-10143170)
chr2 (118-211)||(40837454-40837547)
chr2 (77-143)||(32848818-32848886)
chr2 (115-162)||(1939407-1939454)
chr2 (100-167)||(3673740-3673807)
chr2 (118-165)||(31740031-31740078)
chr2 (100-165)||(18962110-18962175)
chr2 (100-165)||(28803578-28803643)
chr2 (118-167)||(33192144-33192193)
chr2 (371-431)||(4350753-4350813)
chr2 (373-437)||(12140597-12140661)
chr2 (109-177)||(40481852-40481920)
chr2 (109-177)||(40512526-40512594)
chr2 (116-227)||(42817379-42817497)
chr2 (115-221)||(750097-750203)
chr2 (102-164)||(13630354-13630416)
chr2 (368-426)||(38077025-38077083)
chr2 (99-164)||(3423841-3423906)
chr2 (115-211)||(6988063-6988166)
chr2 (100-165)||(25609729-25609794)
chr2 (368-413)||(28803495-28803540)
chr2 (368-441)||(32848971-32849044)
chr2 (118-167)||(37053545-37053594)
chr2 (104-165)||(37292419-37292480)
chr2 (100-164)||(4550710-4550774)
chr2 (160-228)||(10563560-10563628)
chr2 (368-436)||(43985269-43985337)
chr2 (100-143)||(914014-914057)
chr2 (118-157)||(9878762-9878801)
chr2 (118-165)||(14209228-14209275)
chr2 (100-159)||(19792500-19792559)
chr2 (118-161)||(32098384-32098427)
chr2 (121-164)||(33256694-33256737)
chr2 (100-199)||(33267554-33267653)
chr2 (100-163)||(34054975-34055038)
chr2 (118-161)||(37033995-37034038)
chr2 (160-211)||(43985022-43985073)
chr2 (371-429)||(4550810-4550868)
chr2 (103-165)||(5133708-5133770)
chr2 (94-172)||(11344828-11344905)
chr2 (125-167)||(14666506-14666548)
chr2 (162-220)||(19629365-19629423)
chr2 (371-429)||(27237842-27237900)
chr2 (167-225)||(35379021-35379079)
chr2 (94-140)||(41033047-41033093)
chr2 (103-164)||(3102629-3102690)
chr2 (160-228)||(5759576-5759645)
chr2 (100-165)||(9478232-9478297)
chr2 (100-161)||(11344360-11344421)
chr2 (372-437)||(13866942-13867007)
chr2 (162-211)||(19826266-19826315)
chr2 (118-175)||(29288618-29288675)
chr2 (100-165)||(29729858-29729923)
chr2 (118-155)||(31461389-31461426)
chr2 (103-152)||(33576679-33576728)
chr2 (100-165)||(33942084-33942148)
chr2 (130-167)||(35539686-35539723)
chr2 (160-221)||(43141871-43141932)
chr2 (368-439)||(5045107-5045176)
chr2 (101-161)||(5511499-5511559)
chr2 (193-225)||(7928304-7928336)
chr2 (160-212)||(9477952-9478004)
chr2 (118-150)||(10285304-10285336)
chr2 (368-408)||(16398441-16398481)
chr2 (160-224)||(33941909-33941973)
chr2 (194-226)||(44443355-44443387)
[»] chr1 (94 HSPs)
chr1 (94-165)||(15360821-15360892)
chr1 (115-228)||(27140433-27140546)
chr1 (115-165)||(44936662-44936712)
chr1 (110-165)||(48830148-48830203)
chr1 (115-228)||(10199410-10199530)
chr1 (115-165)||(29007788-29007838)
chr1 (120-166)||(30815706-30815752)
chr1 (120-228)||(25479534-25479649)
chr1 (160-232)||(37240842-37240914)
chr1 (118-228)||(15437914-15438031)
chr1 (368-431)||(23373260-23373323)
chr1 (100-163)||(37818397-37818460)
chr1 (118-161)||(42351982-42352025)
chr1 (100-167)||(45107556-45107622)
chr1 (110-165)||(49517013-49517068)
chr1 (115-161)||(14737781-14737827)
chr1 (103-161)||(23373366-23373424)
chr1 (94-164)||(45804204-45804274)
chr1 (127-228)||(2522596-2522697)
chr1 (118-227)||(2773614-2773723)
chr1 (124-165)||(4363704-4363745)
chr1 (104-161)||(6976885-6976942)
chr1 (100-165)||(17269183-17269248)
chr1 (124-165)||(28467379-28467420)
chr1 (128-177)||(41516140-41516189)
chr1 (101-166)||(42336596-42336661)
chr1 (116-161)||(45234146-45234191)
chr1 (100-165)||(45999360-45999425)
chr1 (157-221)||(11893602-11893665)
chr1 (99-163)||(24146334-24146397)
chr1 (160-228)||(34290236-34290304)
chr1 (371-431)||(40485720-40485780)
chr1 (100-219)||(45205001-45205127)
chr1 (368-431)||(4033964-4034027)
chr1 (100-139)||(4202227-4202266)
chr1 (115-161)||(7707167-7707211)
chr1 (118-157)||(9507080-9507119)
chr1 (370-437)||(15581316-15581383)
chr1 (154-221)||(26779934-26780001)
chr1 (130-228)||(30257646-30257751)
chr1 (115-150)||(36641823-36641858)
chr1 (100-228)||(37593686-37593806)
chr1 (160-227)||(39347970-39348037)
chr1 (118-165)||(52286629-52286676)
chr1 (119-165)||(1879099-1879145)
chr1 (115-165)||(4200177-4200227)
chr1 (115-165)||(4622041-4622091)
chr1 (115-165)||(11211066-11211116)
chr1 (74-141)||(11560645-11560716)
chr1 (73-165)||(15361615-15361711)
chr1 (118-160)||(17631178-17631220)
chr1 (100-182)||(23370353-23370435)
chr1 (118-164)||(30285842-30285888)
chr1 (371-437)||(31517681-31517747)
chr1 (118-164)||(33527220-33527266)
chr1 (119-165)||(35080142-35080188)
chr1 (118-168)||(43420209-43420259)
chr1 (371-413)||(49521770-49521812)
chr1 (149-182)||(3224947-3224980)
chr1 (372-413)||(4363599-4363640)
chr1 (160-221)||(5592694-5592755)
chr1 (108-165)||(6074415-6074472)
chr1 (100-165)||(7200914-7200979)
chr1 (193-226)||(15361073-15361106)
chr1 (118-167)||(16322800-16322849)
chr1 (118-163)||(23895287-23895332)
chr1 (370-439)||(24279811-24279880)
chr1 (120-165)||(27738252-27738297)
chr1 (135-220)||(32927155-32927238)
chr1 (118-167)||(36151575-36151624)
chr1 (120-165)||(44032071-44032116)
chr1 (110-143)||(49557084-49557117)
chr1 (104-165)||(50998489-50998550)
chr1 (100-156)||(1730825-1730881)
chr1 (160-228)||(4576805-4576873)
chr1 (76-169)||(5150850-5150939)
chr1 (108-164)||(5756759-5756815)
chr1 (160-224)||(7218080-7218144)
chr1 (160-228)||(7262520-7262588)
chr1 (103-167)||(7274009-7274073)
chr1 (117-165)||(9656600-9656648)
chr1 (105-165)||(15488892-15488952)
chr1 (118-178)||(25719485-25719545)
chr1 (193-261)||(28689421-28689489)
chr1 (118-158)||(37175949-37175989)
chr1 (160-228)||(37842357-37842425)
chr1 (193-225)||(38503470-38503502)
chr1 (103-167)||(40304124-40304188)
chr1 (160-228)||(44940341-44940408)
chr1 (115-167)||(46980199-46980251)
chr1 (119-167)||(48064261-48064309)
chr1 (100-167)||(48282066-48282134)
chr1 (105-149)||(50319230-50319274)
chr1 (100-164)||(52559901-52559965)
[»] chr8 (61 HSPs)
chr8 (116-222)||(11494102-11494208)
chr8 (74-162)||(12224974-12225058)
chr8 (120-175)||(2100758-2100813)
chr8 (158-261)||(11569426-11569529)
chr8 (104-182)||(26215433-26215511)
chr8 (75-157)||(26820112-26820189)
chr8 (118-164)||(27728094-27728140)
chr8 (115-167)||(2699254-2699306)
chr8 (116-156)||(8799354-8799394)
chr8 (72-165)||(13410267-13410356)
chr8 (120-176)||(6875321-6875379)
chr8 (118-221)||(10079079-10079182)
chr8 (100-167)||(11188225-11188292)
chr8 (118-165)||(25867037-25867084)
chr8 (118-219)||(1470867-1470975)
chr8 (115-157)||(38561674-38561716)
chr8 (115-157)||(40728498-40728540)
chr8 (368-425)||(31875548-31875605)
chr8 (100-161)||(34563183-34563244)
chr8 (103-226)||(28769343-28769473)
chr8 (115-167)||(29699202-29699254)
chr8 (100-211)||(29973014-29973132)
chr8 (99-163)||(41620365-41620429)
chr8 (98-165)||(1112784-1112851)
chr8 (100-163)||(4558731-4558794)
chr8 (193-228)||(30389132-30389167)
chr8 (368-407)||(30987962-30988001)
chr8 (120-167)||(35453693-35453740)
chr8 (118-165)||(44348438-44348485)
chr8 (119-157)||(10437837-10437875)
chr8 (118-152)||(11119084-11119118)
chr8 (100-150)||(14482135-14482185)
chr8 (99-161)||(14949820-14949882)
chr8 (159-221)||(30277254-30277316)
chr8 (115-165)||(31862441-31862491)
chr8 (103-165)||(34788499-34788561)
chr8 (118-152)||(39392746-39392780)
chr8 (100-165)||(44865636-44865702)
chr8 (100-165)||(3645888-3645953)
chr8 (137-182)||(5383128-5383173)
chr8 (179-228)||(8066772-8066821)
chr8 (118-167)||(9836924-9836973)
chr8 (160-225)||(9956819-9956884)
chr8 (112-165)||(11056739-11056792)
chr8 (127-228)||(11493932-11494033)
chr8 (100-161)||(14929192-14929253)
chr8 (167-228)||(20672757-20672818)
chr8 (120-165)||(29262946-29262991)
chr8 (368-413)||(29699333-29699378)
chr8 (160-261)||(30191110-30191211)
chr8 (120-157)||(33714315-33714352)
chr8 (371-431)||(2487955-2488015)
chr8 (118-166)||(2605970-2606018)
chr8 (192-228)||(4281578-4281614)
chr8 (193-261)||(5069730-5069798)
chr8 (105-169)||(5071035-5071099)
chr8 (117-177)||(10722582-10722641)
chr8 (100-156)||(27320249-27320304)
chr8 (160-220)||(27754404-27754464)
chr8 (124-176)||(40357856-40357908)
chr8 (100-160)||(42597334-42597394)
[»] chr4 (73 HSPs)
chr4 (100-165)||(8130107-8130172)
chr4 (74-228)||(4798568-4798723)
chr4 (117-211)||(47800580-47800674)
chr4 (101-221)||(49219073-49219200)
chr4 (118-227)||(24929444-24929560)
chr4 (115-160)||(23815318-23815363)
chr4 (118-167)||(49085940-49085989)
chr4 (118-182)||(27406002-27406066)
chr4 (115-211)||(50400442-50400538)
chr4 (368-439)||(2996633-2996704)
chr4 (118-165)||(4071833-4071880)
chr4 (118-165)||(20936074-20936121)
chr4 (118-165)||(32724070-32724117)
chr4 (100-159)||(47970251-47970310)
chr4 (118-211)||(4449121-4449214)
chr4 (118-226)||(17884019-17884134)
chr4 (103-164)||(19422354-19422415)
chr4 (118-211)||(1404373-1404468)
chr4 (160-228)||(7694012-7694080)
chr4 (100-152)||(28623222-28623274)
chr4 (120-164)||(36734846-36734890)
chr4 (118-165)||(27623586-27623633)
chr4 (100-167)||(46415862-46415929)
chr4 (118-165)||(54325109-54325156)
chr4 (110-165)||(54327521-54327576)
chr4 (100-161)||(4191672-4191734)
chr4 (115-165)||(30024648-30024698)
chr4 (115-161)||(35743252-35743298)
chr4 (118-184)||(41701494-41701560)
chr4 (100-165)||(4663768-4663833)
chr4 (100-165)||(21593084-21593148)
chr4 (118-183)||(22684570-22684635)
chr4 (161-226)||(29263371-29263436)
chr4 (118-228)||(46019631-46019745)
chr4 (118-167)||(52735073-52735122)
chr4 (99-182)||(54462157-54462236)
chr4 (120-177)||(56007639-56007696)
chr4 (116-164)||(11917508-11917556)
chr4 (72-165)||(28232454-28232543)
chr4 (100-152)||(51044544-51044596)
chr4 (162-221)||(25548137-25548196)
chr4 (370-413)||(27123317-27123360)
chr4 (128-167)||(29194473-29194512)
chr4 (118-165)||(29373959-29374006)
chr4 (118-165)||(30338664-30338711)
chr4 (122-164)||(5219573-5219615)
chr4 (119-157)||(11785234-11785272)
chr4 (371-413)||(12816998-12817040)
chr4 (194-228)||(24747353-24747387)
chr4 (198-264)||(25571298-25571364)
chr4 (160-206)||(28615334-28615380)
chr4 (118-160)||(39063719-39063761)
chr4 (193-223)||(52315204-52315234)
chr4 (118-167)||(10192235-10192284)
chr4 (130-163)||(11788740-11788773)
chr4 (130-163)||(11800907-11800940)
chr4 (376-437)||(18628494-18628555)
chr4 (120-165)||(24160567-24160612)
chr4 (100-165)||(30207643-30207707)
chr4 (118-167)||(46013370-46013419)
chr4 (120-165)||(53626729-53626774)
chr4 (160-220)||(6978972-6979032)
chr4 (402-446)||(8469041-8469085)
chr4 (119-175)||(9509700-9509756)
chr4 (100-164)||(11389459-11389523)
chr4 (160-228)||(21593008-21593076)
chr4 (92-160)||(24160915-24160983)
chr4 (100-144)||(24936243-24936287)
chr4 (193-225)||(42461284-42461316)
chr4 (370-422)||(50799986-50800038)
chr4 (117-157)||(52926178-52926218)
chr4 (193-229)||(55084482-55084518)
chr4 (118-177)||(55437346-55437403)
[»] chr7 (60 HSPs)
chr7 (115-177)||(39591527-39591589)
chr7 (119-182)||(18749865-18749928)
chr7 (371-425)||(36537971-36538025)
chr7 (145-243)||(39345456-39345554)
chr7 (100-165)||(992003-992068)
chr7 (100-165)||(33894556-33894620)
chr7 (118-223)||(26935564-26935669)
chr7 (160-228)||(24363603-24363671)
chr7 (103-167)||(45593789-45593853)
chr7 (118-165)||(5006581-5006628)
chr7 (118-177)||(19624177-19624236)
chr7 (110-172)||(25600693-25600753)
chr7 (104-167)||(35536044-35536107)
chr7 (100-161)||(7244635-7244696)
chr7 (167-228)||(7244687-7244748)
chr7 (368-425)||(23214915-23214972)
chr7 (100-165)||(28165024-28165089)
chr7 (118-167)||(30456520-30456569)
chr7 (117-169)||(1418381-1418433)
chr7 (118-162)||(2727435-2727479)
chr7 (118-182)||(7243595-7243659)
chr7 (371-439)||(22387835-22387903)
chr7 (103-167)||(31341130-31341194)
chr7 (371-431)||(36598303-36598363)
chr7 (145-221)||(39360008-39360084)
chr7 (160-208)||(46104589-46104637)
chr7 (118-162)||(47004038-47004082)
chr7 (118-165)||(1417215-1417262)
chr7 (115-261)||(4966104-4966257)
chr7 (100-167)||(5373158-5373225)
chr7 (94-165)||(31002688-31002759)
chr7 (118-165)||(40689058-40689105)
chr7 (118-177)||(43318588-43318647)
chr7 (118-165)||(49060491-49060538)
chr7 (105-143)||(1432061-1432099)
chr7 (118-164)||(5715111-5715157)
chr7 (122-164)||(9527163-9527205)
chr7 (115-165)||(23918905-23918955)
chr7 (196-230)||(35007633-35007667)
chr7 (118-151)||(2999142-2999175)
chr7 (110-167)||(8680935-8680992)
chr7 (368-413)||(27626088-27626133)
chr7 (100-153)||(35808988-35809041)
chr7 (99-164)||(38496589-38496652)
chr7 (162-211)||(39505958-39506007)
chr7 (116-165)||(47046180-47046229)
chr7 (115-163)||(1373614-1373662)
chr7 (193-225)||(6824953-6824985)
chr7 (118-162)||(12835012-12835056)
chr7 (124-164)||(17989096-17989136)
chr7 (105-165)||(27121658-27121718)
chr7 (118-166)||(27492746-27492794)
chr7 (105-141)||(30535501-30535537)
chr7 (118-158)||(40687606-40687646)
chr7 (117-165)||(41040117-41040165)
chr7 (118-150)||(42656466-42656498)
chr7 (160-228)||(44151482-44151550)
chr7 (124-164)||(45777244-45777284)
chr7 (121-165)||(46825052-46825096)
chr7 (373-413)||(47427268-47427308)
[»] chr5 (61 HSPs)
chr5 (118-168)||(37063143-37063193)
chr5 (118-223)||(3237051-3237156)
chr5 (100-165)||(35135734-35135799)
chr5 (99-161)||(7096203-7096265)
chr5 (368-437)||(11095436-11095505)
chr5 (118-227)||(11615459-11615568)
chr5 (118-165)||(14295457-14295504)
chr5 (161-228)||(17258885-17258952)
chr5 (112-167)||(38766913-38766968)
chr5 (118-164)||(28586839-28586885)
chr5 (100-177)||(20982195-20982272)
chr5 (116-165)||(29117002-29117051)
chr5 (126-167)||(39750102-39750143)
chr5 (140-220)||(32197700-32197780)
chr5 (117-165)||(39823193-39823241)
chr5 (100-182)||(13224362-13224442)
chr5 (100-143)||(27106017-27106060)
chr5 (124-226)||(1084125-1084227)
chr5 (160-226)||(2880551-2880617)
chr5 (115-228)||(15074751-15074869)
chr5 (115-165)||(32969189-32969239)
chr5 (118-160)||(40097160-40097202)
chr5 (116-165)||(985582-985631)
chr5 (378-439)||(14599311-14599372)
chr5 (100-165)||(18704108-18704172)
chr5 (160-219)||(10272442-10272501)
chr5 (100-143)||(10391286-10391329)
chr5 (74-150)||(21782656-21782728)
chr5 (100-143)||(40048374-40048417)
chr5 (115-165)||(9703312-9703362)
chr5 (371-437)||(10125659-10125725)
chr5 (118-160)||(10303752-10303794)
chr5 (115-161)||(10537751-10537797)
chr5 (119-157)||(11040996-11041034)
chr5 (100-150)||(17756816-17756866)
chr5 (121-167)||(26516354-26516400)
chr5 (101-143)||(34117627-34117669)
chr5 (118-156)||(35960365-35960403)
chr5 (378-412)||(40864717-40864751)
chr5 (124-165)||(583845-583886)
chr5 (118-167)||(12407731-12407780)
chr5 (159-228)||(18543199-18543267)
chr5 (167-228)||(25461318-25461379)
chr5 (100-145)||(29588813-29588858)
chr5 (368-413)||(32172713-32172758)
chr5 (118-163)||(34690825-34690870)
chr5 (104-161)||(37968828-37968885)
chr5 (126-163)||(38047929-38047966)
chr5 (160-220)||(5951978-5952038)
chr5 (154-210)||(10771908-10771964)
chr5 (100-211)||(11684356-11684465)
chr5 (160-228)||(11707055-11707123)
chr5 (120-164)||(12595813-12595857)
chr5 (118-167)||(14599373-14599424)
chr5 (383-419)||(18875439-18875475)
chr5 (372-448)||(29363072-29363147)
chr5 (103-143)||(33459029-33459069)
chr5 (118-150)||(35095870-35095902)
chr5 (118-166)||(37386566-37386614)
chr5 (102-150)||(39128574-39128622)
chr5 (131-167)||(41277420-41277456)
[»] scaffold0590 (1 HSPs)
scaffold0590 (100-165)||(1146-1211)
[»] scaffold0275 (1 HSPs)
scaffold0275 (100-165)||(2764-2829)
[»] chr6 (49 HSPs)
chr6 (100-226)||(5328907-5329039)
chr6 (103-165)||(33068633-33068695)
chr6 (101-165)||(10452432-10452496)
chr6 (101-165)||(27889916-27889979)
chr6 (118-165)||(1402947-1402994)
chr6 (118-164)||(2027479-2027525)
chr6 (100-228)||(32386108-32386236)
chr6 (118-165)||(7354155-7354202)
chr6 (100-162)||(2514635-2514697)
chr6 (110-164)||(24836272-24836326)
chr6 (103-165)||(29274301-29274363)
chr6 (110-152)||(30865425-30865467)
chr6 (115-165)||(32513773-32513822)
chr6 (100-165)||(4325380-4325445)
chr6 (104-165)||(7785814-7785875)
chr6 (120-165)||(27595639-27595684)
chr6 (118-182)||(8349719-8349783)
chr6 (370-410)||(24670482-24670522)
chr6 (120-160)||(30784510-30784550)
chr6 (368-424)||(32917257-32917313)
chr6 (72-141)||(34404317-34404382)
chr6 (370-413)||(2460116-2460159)
chr6 (100-226)||(4006647-4006780)
chr6 (120-167)||(10154174-10154221)
chr6 (118-165)||(10749300-10749347)
chr6 (101-143)||(507154-507196)
chr6 (131-177)||(2034499-2034545)
chr6 (118-164)||(2117354-2117400)
chr6 (100-166)||(4247706-4247771)
chr6 (101-139)||(10031692-10031730)
chr6 (371-425)||(27595520-27595574)
chr6 (99-149)||(29940728-29940778)
chr6 (118-167)||(323762-323811)
chr6 (100-165)||(3204614-3204679)
chr6 (100-165)||(3217262-3217327)
chr6 (100-149)||(21959661-21959710)
chr6 (118-167)||(24782010-24782059)
chr6 (120-165)||(27693511-27693556)
chr6 (167-220)||(27998426-27998479)
chr6 (110-143)||(31672013-31672046)
chr6 (167-228)||(33887837-33887898)
chr6 (171-264)||(34939755-34939848)
chr6 (184-228)||(6536971-6537015)
chr6 (125-165)||(7713983-7714023)
chr6 (110-150)||(28531628-28531668)
chr6 (100-140)||(31461611-31461651)
chr6 (369-409)||(32577955-32577995)
chr6 (100-159)||(32843392-32843452)
chr6 (369-409)||(34939574-34939614)
[»] scaffold0024 (1 HSPs)
scaffold0024 (100-164)||(27509-27573)
[»] scaffold0508 (1 HSPs)
scaffold0508 (102-167)||(9845-9910)
[»] scaffold0221 (1 HSPs)
scaffold0221 (100-164)||(20228-20292)
[»] scaffold0311 (1 HSPs)
scaffold0311 (148-228)||(10619-10703)
[»] scaffold0100 (1 HSPs)
scaffold0100 (100-142)||(42550-42592)
[»] scaffold0045 (1 HSPs)
scaffold0045 (115-165)||(84201-84251)
[»] scaffold0022 (1 HSPs)
scaffold0022 (118-152)||(143146-143180)
[»] scaffold0019 (1 HSPs)
scaffold0019 (104-146)||(104225-104267)
[»] scaffold0015 (1 HSPs)
scaffold0015 (119-165)||(69015-69061)
[»] scaffold0153 (2 HSPs)
scaffold0153 (120-165)||(6570-6615)
scaffold0153 (120-165)||(13590-13635)


Alignment Details
Target: chr3 (Bit Score: 437; Significance: 0; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 9 - 461
Target Start/End: Complemental strand, 53736341 - 53735889
Alignment:
Q  9 agcagaacctgtggttctccctccaaactatcctgtaaaacgaaaagaaaagataacttagaacttgtttggataaacaacttaattaatcaagtgctta 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53736341 agcaaaacctgtggttctccctccaaactatcctgtaaaacgaaaagaaaggataacttagaacttgtttggataaacaacttaattaatcaagtgctta 53736242  T
Q  109 cgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53736241 cgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctg 53736142  T
Q  209 aaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaacagtttcgtttcgccgtaaatggactcaaataagtctatccaaagaggccc 308  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53736141 aaagcaacttatgaacatgtaatacgcggtttccagaagctctcttaaacagtttcgtttcgccgtaaatggactcaaataagtctatccaaagaggccc 53736042  T
Q  309 tgaatcagatcaattcaaaacctatcctgaagagcttatgaaaattaagttaaataagctggacatgtcataagttgtttcaataagttctctcaaacaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53736041 tgaatcagatcaattcaaaacctatcctgaagagcttatgaaaattaagttaaataagctggacatgtcataagttgtttcaataagttctctcaaacaa 53735942  T
Q  409 tctcattagtgtttatgtcagtaaataagttaatccaaacagtccctaaatcc 461  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53735941 tctcattagtgtttatgtcagtaaataagttaatccaaacagaccctaaatcc 53735889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 54775061 - 54775193
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttca------tataagttgttttcataacctatactgaagtgtt 193  Q
    |||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||| |      |||||| ||||||| |||  |||  || || |||    
T  54775061 aagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataattataagctgttttcgtaagttatcatggagagtt 54775160  T
Q  194 tatgaaaataagctgaaagcaacttatgaacat 226  Q
    |||||||||||| |||||||| |||||| ||||    
T  54775161 tatgaaaataagatgaaagcagcttatggacat 54775193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 1395604 - 1395669
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| || |||| || |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  1395604 aagtgcatatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataag 1395669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 27792805 - 27792870
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| || |||||| | ||||||||||||||||| |||||||||||||||||||||    
T  27792805 aagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataag 27792870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 49587052 - 49586988
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||| ||| || |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  49587052 aagtgcttac-tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataag 49586988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 20669117 - 20669240
Alignment:
Q  105 cttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataa 204  Q
    |||| |||| || |||||||||||||| | ||| ||||| |||||| | || ||||||||| ||||||||||| ||||  || || | ||||| ||||||    
T  20669117 cttatgtataagctatttctataacaagatatacaataaagtcaaaatgttgtcatataagctgttttcataagctatcttggagagcttatgtaaataa 20669216  T
Q  205 gctgaaagcaacttatgaacatgt 228  Q
    || |||| || |||||||||||||    
T  20669217 gcggaaaacagcttatgaacatgt 20669240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 10357381 - 10357431
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||||    
T  10357381 agttatttctataacaaaagataaaataatgttaaatttttttcatataag 10357431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 20143873 - 20143926
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagttgt 169  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  20143873 agttatttctataataaaagataaaataa-gtcaaactattttcatataacttgt 20143926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 23269316 - 23269263
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagttgt 169  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  23269316 agttatttctataataaaagataaaataa-gtcaaactattttcatataacttgt 23269263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 20192765 - 20192679
Alignment:
Q  74 tgtttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||||||| || ||||||    ||||||| |||| || ||||| |||||||||||||||||||| |||||||  |||||||||||    
T  20192765 tgtttggataaacagctcaattaa----gtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataa 20192679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 51130786 - 51130855
Alignment:
Q  196 tgaaaataagctgaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaacagtttcg 265  Q
    |||||||||||||||||||||||||| |||||| ||||| ||||| || ||||||||  ||||| |||||    
T  51130786 tgaaaataagctgaaagcaacttatggacatgtcatacatggttttcataagctctcccaaacaatttcg 51130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 53457310 - 53457371
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||| |||||||| || || ||| ||||||||||||||||||| |||||||||||||||||    
T  53457310 aagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaaactattttcata 53457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 24605158 - 24605086
Alignment:
Q  95 taatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||| ||||| ||| |||| |||||||||||||||||||||| |||||| ||||||| |||| ||| ||||||    
T  24605158 taattaagtgtttatgtataagttatttctataacaaaagatgaaataaagtcaaaccatttgcatgtaagtt 24605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 10101619 - 10101548
Alignment:
Q  95 taatcaagtgcttac-gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||||||||| | || ||||||||||||||||||||||||||||| || ||| | ||||||||||||    
T  10101619 taattaagtgcttacagaataagttatttctataacaaaagataaaataaagttaaattgttttcatataag 10101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 10212544 - 10212473
Alignment:
Q  95 taatcaagtgcttac-gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||||||||| | || ||||||||||||||||||||||||||||| || ||| | ||||||||||||    
T  10212544 taattaagtgcttacagaataagttatttctataacaaaagataaaataaagttaaattgttttcatataag 10212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 20174025 - 20173982
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    ||||||||| |||| |||||||||||||||||||||||||||||    
T  20174025 aagtgcttatgtattagttatttctataacaaaagataaaataa 20173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 24235810 - 24235755
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||  |||||||    
T  24235810 gtataagttatttctataacaaaagataatataaagtcaaactatttgaatataag 24235755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 2321110 - 2321171
Alignment:
Q  102 gtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||||| || || ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  2321110 gtgcttacgtataagctaattcaataacaaaagataaa-taaagtcaaactattttcatataa 2321171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 25195377 - 25195419
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatat 162  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  25195377 tttctataacaaaagataaaataaagtcaaattattttcatat 25195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 40122884 - 40122763
Alignment:
Q  105 cttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttca------tataagttgttttcataacctatactgaagtgtttatga 198  Q
    |||| |||| || |||||| ||||||||||||||||||| |||||||| ||||||      ||||||||||||| |||| |||| || ||  ||| |||     
T  40122884 cttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcataaagctataagttgtttttataagctatcctaaaaagttaatgg 40122785  T
Q  199 aaataagctgaaagcaacttat 220  Q
    ||||||||| ||| ||||||||    
T  40122784 aaataagctaaaaacaacttat 40122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 1816582 - 1816651
Alignment:
Q  159 atataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||||||||||||||||| |||||||| || | |||| |||||||||||||| || | |||||| ||||    
T  1816582 atataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgt 1816651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 6241201 - 6241160
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  6241201 tttctataacaaaagttaaaataaagtcaaactattttcata 6241160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 26990685 - 26990730
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    |||||||||||||||||||||||||| |||||| | ||||||||||    
T  26990685 tatttctataacaaaagataaaataaagtcaaattcttttcatata 26990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 36887503 - 36887572
Alignment:
Q  159 atataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||||||||||||||||| | ||  |||||   ||||||||||||||||||| || |||||||||||||    
T  36887503 atataagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgt 36887572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 38462232 - 38462277
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||||    
T  38462232 tatttctataccaaaagataaaataaagtcaaactgttttcatata 38462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 41028988 - 41028923
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| || |||||||||||||||||| ||||||| ||||| || |||||| |||||    
T  41028988 aagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataag 41028923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 42808932 - 42808989
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    |||||||||||||||||||||||| || ||| | |||| ||||||| |||||||||||    
T  42808932 tttctataacaaaagataaaataaagttaaattgtttttatataagctgttttcataa 42808989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 42809252 - 42809309
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcat 175  Q
    |||||||||||||||||||||||||  || ||| | |||||||||||| |||||||||    
T  42809252 tatttctataacaaaagataaaatatagttaaattgttttcatataagctgttttcat 42809309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 264
Target Start/End: Original strand, 53952045 - 53952152
Alignment:
Q  160 tataagttgttttcataacctatactga---agtgtttatgaaaataagctgaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaa 256  Q
    |||||||||||||||||| ||||| | |   || ||||||||||||||||||||| || || |||||||||| ||   | |||| || ||| ||||||||    
T  53952045 tataagttgttttcataaactataataaccgagagtttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcataagttctcttaa 53952144  T
Q  257 acagtttc 264  Q
    ||||||||    
T  53952145 acagtttc 53952152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 22232777 - 22232825
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagt 166  Q
    ||||| ||||||||| |||||||||| |||||||| |||||||||||||    
T  22232777 tatttatataacaaatgataaaataaagtcaaactgttttcatataagt 22232825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 24413617 - 24413661
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataat 144  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||    
T  24413617 aagtgcttacgtatgagctatttctataacaaaggataaactaat 24413661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 33883787 - 33883747
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaacatgtaatac 233  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  33883787 ttatgaaaataagctgaaaacaacttatgaacatgtcatac 33883747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 11040662 - 11040611
Alignment:
Q  182 tactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgtaatac 233  Q
    ||||| ||||||||||||||||||| |||| ||||||||| |||||| ||||    
T  11040662 tactggagtgtttatgaaaataagccgaaaacaacttatggacatgtcatac 11040611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 16790225 - 16790182
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||||||||  ||| |||||||||||||||||||||||||||||    
T  16790225 aagtgcttatatataagttatttctataacaaaagataaaataa 16790182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 24887402 - 24887355
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||| ||||||||||| |||||||| | ||||||||||    
T  24887402 tatttctataacaatagataaaataaagtcaaactgtattcatataag 24887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 32663590 - 32663636
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatat 162  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  32663590 agttatttctataacaaaagat-aaataaggtcaaacaattttcatat 32663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 33307717 - 33307650
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||| |||| || ||||||  |||||||| || |||||| |||||| ||||||||||||||||    
T  33307717 aagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataagtt 33307650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 37273194 - 37273265
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagtt 439  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||  |||| |||||  | ||||||||||    
T  37273194 tggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatgctaataaataagtt 37273265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 43116547 - 43116500
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||| |  |||||| |||||||||||||    
T  43116547 tatttctataacaaaagataaaatcaaatcaaacaattttcatataag 43116500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 2825113 - 2825194
Alignment:
Q  125 ataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagct 207  Q
    ||||||||||||||||||| || ||||  ||||||| |||||| ||||||||| ||||  || || | |||||||||||||||    
T  2825113 ataacaaaagataaaataaagtaaaacg-ttttcatgtaagttattttcataagctatcttggagagcttatgaaaataagct 2825194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 8007833 - 8007767
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| ||||| |||| || | |||||||||||||||||||| ||| |||||||| || |||||||||    
T  8007833 caagggcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 8007767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 15304466 - 15304420
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||||||||||||||||||| || ||| | |||||||||||    
T  15304466 tatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 20267107 - 20267141
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaacta 153  Q
    ||||||||||||||||||||||||| |||||||||    
T  20267107 atttctataacaaaagataaaataaagtcaaacta 20267141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 23952228 - 23952186
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactatttt 157  Q
    ||||||||||||||||||||||||||| | |||||| ||||||    
T  23952228 agttatttctataacaaaagataaaattaagtcaaagtatttt 23952186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 33307572 - 33307522
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||| | |||||||||||| |||| ||||||||||| |||||||||    
T  33307572 ttatttctagagcaaaagataaaacaatgccaaactatttttatataagtt 33307522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 34954034 - 34954080
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||||||| |||||||||||| ||||| || |||||||||||    
T  34954034 tatttctataacacaagataaaataaagtcaagctgttttcatataa 34954080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 48365006 - 48364956
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    |||| ||||||||| ||||||||||||||||||| |||||| | |||||||    
T  48365006 gtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 905103 - 905058
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgtcaa 149  Q
    ||||| |||| || |||||||||||||||||||||||||| |||||    
T  905103 gcttaagtataagctatttctataacaaaagataaaataaagtcaa 905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 16790493 - 16790432
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||| |||| || ||||| |||||||| |||||||||||  ||||| ||||||||||    
T  16790493 aagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcata 16790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 28283714 - 28283653
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||| | || ||||| |||||||||||||||||||   | |||||||||||||||||    
T  28283714 aagtgcttatgcataagttacttctataacaaaagataaatgtaagtcaaactattttcata 28283653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 28306113 - 28306158
Alignment:
Q  122 tctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||  |||||||| |||||||| ||||||||||||||    
T  28306113 tctataacaaaaagtaaaataaagtcaaactgttttcatataagtt 28306158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 31337516 - 31337471
Alignment:
Q  122 tctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||| ||||||||||||||||| |||||||| |||| |||||||||    
T  31337516 tctaaaacaaaagataaaataaagtcaaactgtttttatataagtt 31337471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 33434143 - 33434083
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||| |||| || |||||  ||||||||||||||||||| ||||||||| |||||||    
T  33434143 aagtgcttatgtataagatattta-ataacaaaagataaaataaagtcaaactactttcata 33434083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 37788793 - 37788857
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||| ||| |||| |||||||| |||||||||||||||||||| ||| || ||||||| |||||    
T  37788793 caagtgtttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataa 37788857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 40321106 - 40321069
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaacatgtaa 230  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  40321106 ttatgaaaataagctgaaaacaacttatgcacatgtaa 40321069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 41159042 - 41159091
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaa 149  Q
    ||||||||| |||| ||||||| ||||||| ||||||||||||| |||||    
T  41159042 aagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 41159091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 44374781 - 44374720
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||| |||| || ||| ||| |||||||||||||||||| |||||| | ||||||||    
T  44374781 aagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 45535286 - 45535237
Alignment:
Q  162 taagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    |||| ||||||||||| |||||||| || ||||||||||||||| |||||    
T  45535286 taagatgttttcataagctatactggagagtttatgaaaataagttgaaa 45535237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 49254707 - 49254740
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaa 150  Q
    ||||||| ||||||||||||||||||||||||||    
T  49254707 ttatttcaataacaaaagataaaataatgtcaaa 49254740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 49772678 - 49772621
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatg 425  Q
    ||||||| |||||||||||||| ||||| ||||  ||||| ||||| |||||||||||    
T  49772678 tggacatctcataagttgtttccataagctctcctaaacagtctcactagtgtttatg 49772621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 51278276 - 51278227
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||||||||||||| || |||||| |||||||| ||||||| ||||||    
T  51278276 tatttctataacaaaatattaaataaagtcaaactgttttcatttaagtt 51278227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 52413258 - 52413197
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||| |||| || ||||| |||||||||||||| |||||  | ||||||||||||||    
T  52413258 aagtgcttatgtataagctatttttataacaaaagatagaataaaatgaaactattttcata 52413197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 2606317 - 2606281
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaaca 407  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  2606317 acatgtcataagttgtttccataagatctctcaaaca 2606281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 4990684 - 4990628
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagt 166  Q
    |||| |||||||||| || |||| |||||||| | |||||||| |||||||||||||    
T  4990684 gtataagttatttctgtatcaaaggataaaatgaagtcaaacttttttcatataagt 4990628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 13481253 - 13481293
Alignment:
Q  125 ataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| ||||||||| ||||||||||||||| |||||    
T  13481253 ataacaaaatataaaataaagtcaaactattttcaaataag 13481293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 21865637 - 21865669
Alignment:
Q  369 ggacatgtcataagttgtttcaataagttctct 401  Q
    ||||||||||||||||||||| |||||||||||    
T  21865637 ggacatgtcataagttgtttctataagttctct 21865669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 436
Target Start/End: Complemental strand, 29600745 - 29600677
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataa 436  Q
    |||||||||||||| ||||||  ||||  ||||||||||||||| || | |||| ||| ||||||||||    
T  29600745 tggacatgtcataaattgttttcataaactctctcaaacaatctaataactgttcatgccagtaaataa 29600677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 33882978 - 33883018
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactatttt 157  Q
    ||||||||||||||||||||||||||| || ||| ||||||    
T  33882978 ttatttctataacaaaagataaaataaagtgaaattatttt 33883018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 33965604 - 33965564
Alignment:
Q  124 tataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||||| |||||||| |||||||| |||||||||||    
T  33965604 tataacaaaaggtaaaataaagtcaaactgttttcatataa 33965564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 34414845 - 34414793
Alignment:
Q  169 ttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 221  Q
    ||||||||| ||||  || || ||||||||||||||||||||| |||||||||    
T  34414845 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 34414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 428
Target Start/End: Original strand, 43115116 - 43115176
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtca 428  Q
    |||||||||||||||||||||| ||||  |||  ||||||||||||  |||| ||||||||    
T  43115116 tggacatgtcataagttgtttccataaactcttccaaacaatctcacaagtgattatgtca 43115176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 439
Target Start/End: Original strand, 48588720 - 48588788
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagtt 439  Q
    ||||||||||||||||||  ||||| |||||||| ||||||||  | ||||| | | ||||||||||||    
T  48588720 acatgtcataagttgtttatataagctctctcaagcaatctcacaaatgtttgtataagtaaataagtt 48588788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 49546648 - 49546575
Alignment:
Q  72 cttgtttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaa 149  Q
    |||||||||||||||||| || ||||    ||||||| || | || ||||| |||||||||||||||||||| |||||    
T  49546648 cttgtttggataaacaacctacttaa----gtgcttatgtgtaagatatttttataacaaaagataaaataaagtcaa 49546575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 457
Target Start/End: Original strand, 40145517 - 40145601
Alignment:
Q  373 atgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagttaatccaaacagtccctaa 457  Q
    |||| |||||||||||| |||||||||||||||||| ||||| |||||||||||||||| |||||| |||||||| || ||||||    
T  40145517 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataagtcaatccaaagagaccctaa 40145601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 17952820 - 17952773
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  17952820 tatttctataacaaaagataaaataaagtcaaactattttcatataag 17952773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 3458605 - 3458662
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagttgtttt 172  Q
    |||||||| |||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  3458605 agttatttttataacaaaagataaaataaagtcaaacttttttcatataagctgtttt 3458662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 10143105 - 10143170
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| ||||||||||||||||||||||||||| | |||||||| |||| |||||||    
T  10143105 aagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataag 10143170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 40837547 - 40837454
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    |||||||||||||||||||||| ||| |||||| | |||||||||| |||||||| |||| ||||  || || | ||||| |||||||||||||    
T  40837547 tatttctataacaaaagataaattaaagtcaaattgttttcatatatgttgttttaataagctatcatgtagagcttatggaaataagctgaaa 40837454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 32848818 - 32848886
Alignment:
Q  77 ttggataaacaacttaatta-atca-agtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||||||||||||||||||| | || ||||||||||||| || ||||||||||||||||||||||||||    
T  32848818 ttggataaacaacttaattatagcatagtgcttacgtattagctatttctataacaaaagataaaataa 32848886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 1939454 - 1939407
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatat 162  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||    
T  1939454 agttatttctataacaaaagataaaataaagtgaaactattttcatat 1939407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 3673740 - 3673807
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||| || ||| | ||||||||||||||    
T  3673740 aagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagtt 3673807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 31740078 - 31740031
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  31740078 tatttctataactaaagataaaataaagtcaaactattttcatataag 31740031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 18962175 - 18962110
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| || ||||| |||||||||||||||||||| || ||||| ||||||||||||    
T  18962175 aagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataag 18962110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 28803643 - 28803578
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||  ||| ||||||||| ||||||||||||||||||| ||||||||  |||||||||||    
T  28803643 aagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataag 28803578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 33192144 - 33192193
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  33192144 tatttctataacataagataaaataaagtcaaactgttttcatataagtt 33192193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 431
Target Start/End: Original strand, 4350753 - 4350813
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagta 431  Q
    |||||||||||| |||||  |||||||||||||||||||||| | |||| |||||||||||    
T  4350753 acatgtcataagctgttttcataagttctctcaaacaatctcttaagtgcttatgtcagta 4350813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 437
Target Start/End: Original strand, 12140597 - 12140661
Alignment:
Q  373 atgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataag 437  Q
    ||||||||||||||||  |||||||||||||||| || || | |||||||||||||||| |||||    
T  12140597 atgtcataagttgttttcataagttctctcaaactatttcgtaagtgtttatgtcagtagataag 12140661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 40481852 - 40481920
Alignment:
Q  109 cgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||| || ||||||||  || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  40481852 cgtataagctatttctactacgaaagataaaataatgtcaaactattttcacataagctgtttccataa 40481920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 40512526 - 40512594
Alignment:
Q  109 cgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||| || ||||||||  || ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  40512526 cgtataagctatttctactacgaaagataaaataatgtcaaactattttcacataagctgtttccataa 40512594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 227
Target Start/End: Complemental strand, 42817497 - 42817379
Alignment:
Q  116 gttatttctataacaaaagataaaataatgtcaaactattttcatataagt-------tgttttcataacctatactgaagtgtttatgaaaataagctg 208  Q
    |||||||||||| ||||||||||||| | ||||| || |||||||||||||       ||||||||||| |||| |||||| | ||||| || ||||||     
T  42817497 gttatttctataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagcttatggaagtaagcta 42817398  T
Q  209 aaagcaacttatgaacatg 227  Q
    ||| ||||||| |||||||    
T  42817397 aaaacaacttaagaacatg 42817379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 221
Target Start/End: Original strand, 750097 - 750203
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagca 214  Q
    |||||||||||||| | |||||||||||| |||||  | || ||  |||||||||| |  ||||||||  || |||  ||||| ||||||||||||||||    
T  750097 agttatttctataatacaagataaaataaagtcaagttgttctcgcataagttgttatagtaacctatcttggagtacttatggaaataagctgaaagca 750196  T
Q  215 acttatg 221  Q
    |||||||    
T  750197 acttatg 750203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 13630416 - 13630354
Alignment:
Q  102 gtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||| |||| |||||||||| || |||||||||| |||| |||||||| |||||||||||    
T  13630416 gtgcttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataa 13630354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 426
Target Start/End: Complemental strand, 38077083 - 38077025
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgt 426  Q
    |||| ||||| |||||||||| || |||||||||||||||||||||  |||||||||||    
T  38077083 tggaaatgtcgtaagttgttttaagaagttctctcaaacaatctcacaagtgtttatgt 38077025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 3423906 - 3423841
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||| ||| |||| |||||||| | || ||||||||||||||| |||||| |||||||||||||    
T  3423906 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 3423841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 6988063 - 6988166
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttc-------atataagttgttttcataacctatactgaagtgtttatgaaaataagct 207  Q
    |||| |||||||||||||||||||||||| |||||| |||||||        |||||||||||||||||| ||||  ||||| ||||||  ||||||| |    
T  6988063 agttttttctataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctatcttgaagagtttatagaaataagat 6988162  T
Q  208 gaaa 211  Q
    ||||    
T  6988163 gaaa 6988166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 25609729 - 25609794
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| || ||||||||||| |||||||||||||| |||||  ||||||| ||||||    
T  25609729 aagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataag 25609794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 413
Target Start/End: Complemental strand, 28803540 - 28803495
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||    
T  28803540 tggacatgtcataagttgtttccatatgttctctcaaacagtctca 28803495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 441
Target Start/End: Original strand, 32848971 - 32849044
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagttaa 441  Q
    ||||||| ||||||  |||||||||||||||||||||||  |||||  |||| |||||||  ||||||||||||    
T  32848971 tggacatatcataacatgtttcaataagttctctcaaaccgtctcacaagtgattatgtcgataaataagttaa 32849044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 37053545 - 37053594
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||| || ||||||||| |||||||| ||||||||||||||    
T  37053545 tatttctataacagaaaataaaataaagtcaaactgttttcatataagtt 37053594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 37292480 - 37292419
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||| |||| | | || ||||||||||||||||| || ||||||||||||||||||    
T  37292480 gcttacgtattagttgtatatacaacaaaagataaaataaagtaaaactattttcatataag 37292419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 4550710 - 4550774
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||| |||| |||| |||| |||| |||||||||||||| ||||| || |||||||||||    
T  4550710 aagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataa 4550774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 10563628 - 10563560
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||||||||||||| |||| |||||| | ||| |||||||||||||||  | |||||| ||||||    
T  10563628 tataagttgttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgt 10563560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 436
Target Start/End: Original strand, 43985269 - 43985337
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataa 436  Q
    ||||||||||||||||||||||| |||  ||||||||||| | | |  |||||||||||||||| ||||    
T  43985269 tggacatgtcataagttgtttcagtaatctctctcaaacagttttacaagtgtttatgtcagtagataa 43985337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 914014 - 914057
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||| |||||||||||  ||||||||||||||||||||||||||    
T  914014 aagtacttacgtatgaactatttctataacaaaagataaaataa 914057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 157
Target Start/End: Complemental strand, 9878801 - 9878762
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactatttt 157  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  9878801 tatttctataacaaaagataaaataaactcaaactatttt 9878762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 14209228 - 14209275
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| |||||||||||||||||||  ||||||| ||||||||||||    
T  14209228 tatttcaataacaaaagataaaataaattcaaactgttttcatataag 14209275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 19792559 - 19792500
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttca 159  Q
    ||||| ||| ||||| | |||||||||| |||||||||||||||| ||||||| ||||||    
T  19792559 aagtgattatgtatgtgctatttctatatcaaaagataaaataatttcaaactgttttca 19792500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 32098427 - 32098384
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    |||||||||||||||||||||||||| |||||| | ||||||||    
T  32098427 tatttctataacaaaagataaaataaagtcaaagtgttttcata 32098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 33256694 - 33256737
Alignment:
Q  121 ttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||    
T  33256694 ttctataacaatagataaaataaagtcaaactgttttcatataa 33256737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 199
Target Start/End: Complemental strand, 33267653 - 33267554
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaa 199  Q
    ||||||||| |||| |  |||||||||||||||   |||||||| || ||||| |||||||||||| |||||| |||| |||| ||| || | |||||||    
T  33267653 aagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataagctgtttttataagctatgctggagagcttatgaa 33267554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 34055038 - 34054975
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    ||||||||| ||||  | |||||||||||||||||||||||||| | |||||| ||| ||||||    
T  34055038 aagtgcttatgtataggctatttctataacaaaagataaaataaaggcaaactgtttacatata 34054975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 37033995 - 37034038
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||    
T  37033995 tatttctataaaaaaagataaaataaagtcaaacgattttcata 37034038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 43985073 - 43985022
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    |||||||||||||||||| ||||  ||||| | |||||||||||||||||||    
T  43985073 tataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaa 43985022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 4550810 - 4550868
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcag 429  Q
    ||||||||||||||||||| ||||| |||| |||||| || ||| |||||||| |||||    
T  4550810 acatgtcataagttgtttccataagctctcccaaacagtcgcatcagtgtttacgtcag 4550868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 5133708 - 5133770
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| |||| || |||||||||||||||||||||||||| |  ||||| |||| |||||||    
T  5133708 tgcttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataag 5133770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 11344905 - 11344828
Alignment:
Q  94 ttaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgtttt 172  Q
    ||||||||| | ||||||||  | |||||| ||| ||||||| || |||||||| ||||||||||||||||| ||||||    
T  11344905 ttaatcaagcgtttacgtataggctatttc-ataccaaaagacaagataatgtccaactattttcatataagctgtttt 11344828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 14666506 - 14666548
Alignment:
Q  125 ataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||||||||| ||||||||  |||||||||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagtt 14666548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 19629365 - 19629423
Alignment:
Q  162 taagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttat 220  Q
    |||| ||||||||||| |||||||| || ||||||||||||||| ||||| || |||||    
T  19629365 taagatgttttcataagctatactggagagtttatgaaaataagttgaaatcagcttat 19629423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 27237900 - 27237842
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcag 429  Q
    |||||||||||| |||||| |||||||||  |||||| | ||| |||||||||||||||    
T  27237900 acatgtcataagctgtttctataagttctaccaaacagtttcactagtgtttatgtcag 27237842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 35379079 - 35379021
Alignment:
Q  167 tgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaaca 225  Q
    ||||||||||| ||||  || || | ||||||||||||||||||| |||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaaca 35379021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 41033093 - 41033047
Alignment:
Q  94 ttaatcaagtgcttacgtatgagttatttctataacaaaagataaaa 140  Q
    ||||| ||||||||| |||| || |||||||||||||||||||||||    
T  41033093 ttaattaagtgcttatgtataagctatttctataacaaaagataaaa 41033047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 3102629 - 3102690
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||| |||| || ||||| |||| ||||| ||||||||| ||||||||||||| ||||||    
T  3102629 tgcttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataa 3102690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 5759645 - 5759576
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa-gcaacttatgaacatgt 228  Q
    |||||| ||||||||||| |||| ||| || |||| ||||||||||||||||  ||||||||| ||||||    
T  5759645 tataagctgttttcataagctattctggagggtttgtgaaaataagctgaaacacaacttatggacatgt 5759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 9478232 - 9478297
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||| ||| |||| || |||||||||||||  |||||||||||  ||||| ||||||||||||||    
T  9478232 aagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataag 9478297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 11344421 - 11344360
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||| | || || ||||||||||||||||||||||| || |||||| | ||||||||    
T  11344421 aagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcata 11344360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 13866942 - 13867007
Alignment:
Q  372 catgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataag 437  Q
    ||||||||| |||||||   |||||||||||||||| |||||  |||||||||| ||||| |||||    
T  13866942 catgtcataggttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataag 13867007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 19826266 - 19826315
Alignment:
Q  162 taagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    |||| ||||||||||| |||||||| || ||||||||||||||| |||||    
T  19826266 taagatgttttcataagctatactggagagtttatgaaaataagttgaaa 19826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 29288618 - 29288675
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcat 175  Q
    |||||||| ||||||||||||||||| |   || | ||||||||||||||||||||||    
T  29288618 tatttctacaacaaaagataaaataaaggtgaattgttttcatataagttgttttcat 29288675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 29729858 - 29729923
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||  | ||||| |||||||||||||||| ||| || ||||| |||||| |||||    
T  29729858 aagtgcttacgtatatgctatttttataacaaaagataaattaaagtgaaactgttttcacataag 29729923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 31461389 - 31461426
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactatt 155  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  31461389 tatttctataacaaaagataaaataaagtcaaattatt 31461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 33576728 - 33576679
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaact 152  Q
    |||||| ||||  |||||||||||||||||||||| ||||| ||||||||    
T  33576728 tgcttatgtataggttatttctataacaaaagatacaataaagtcaaact 33576679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 33942084 - 33942148
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||  ||||||| |||||||| | ||||||||||||||| |||||||| ||||||| ||||    
T  33942084 aagtgcttttgtatgagctatttcta-atcaaaagataaaataaagtcaaactgttttcatgtaag 33942148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 35539686 - 35539723
Alignment:
Q  130 aaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  35539686 aaaagataaaataaaatcaaactattttcatataagtt 35539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 43141871 - 43141932
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 221  Q
    |||||| ||||||||||| |||| |||||| ||||||| ||||||  ||||| |||||||||    
T  43141871 tataagatgttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatg 43141932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 5045176 - 5045107
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagtt 439  Q
    ||||||||  |||||||||||| |||||  |||||||||| |||||  ||||||  ||||||||||||||||    
T  5045176 tggacatgctataagttgtttctataag--ctctcaaacagtctcacaagtgttgttgtcagtaaataagtt 5045107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 5511499 - 5511559
Alignment:
Q  101 agtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    |||||||  |||| ||||||||||||||  ||| ||||||||| |||||||| ||||||||    
T  5511499 agtgcttctgtataagttatttctataatgaaatataaaataaagtcaaacttttttcata 5511559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 7928336 - 7928304
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaaca 225  Q
    ||||||||||||||||||| |||||||||||||    
T  7928336 ttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 9477952 - 9478004
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaag 212  Q
    |||||||||||||||||| |||| ||| || | ||||||||||||| ||||||    
T  9477952 tataagttgttttcataagctatcctggagaggttatgaaaataagttgaaag 9478004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 10285304 - 10285336
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaa 150  Q
    ||||||||||||||||| |||||||||||||||    
T  10285304 tatttctataacaaaagttaaaataatgtcaaa 10285336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 16398481 - 16398441
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaa 408  Q
    |||||||||||||||||||||  ||| ||||||||||||||    
T  16398481 tggacatgtcataagttgttttcatatgttctctcaaacaa 16398441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 33941909 - 33941973
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaac 224  Q
    ||||| |||||||||||| ||||  || || |||||||| |||||| |||||||| |||||||||    
T  33941909 tataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaac 33941973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 44443355 - 44443387
Alignment:
Q  194 tatgaaaataagctgaaagcaacttatgaacat 226  Q
    |||||||||||||||||| ||||||||||||||    
T  44443355 tatgaaaataagctgaaaacaacttatgaacat 44443387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 15360821 - 15360892
Alignment:
Q  94 ttaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  15360821 ttaatcaagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataag 15360892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 27140433 - 27140546
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagca 214  Q
    |||||||||||||||||||||||||||||| | ||| | |||| ||||||| |||||| |||| ||||  || || | ||||| ||||||||||||| ||    
T  27140433 agttatttctataacaaaagataaaataatattaaattgtttttatataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaaca 27140532  T
Q  215 acttatgaacatgt 228  Q
    ||||||| ||||||    
T  27140533 acttatggacatgt 27140546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 44936712 - 44936662
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  44936712 agttatttctataacaaaagataagataaagtcaaactattttcatataag 44936662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 48830203 - 48830148
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||||||||||| || ||||||||||||| |||||||||||||||||||||    
T  48830203 gtataagttatttctattaccaaagataaaataaagtcaaactattttcatataag 48830148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 10199530 - 10199410
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcat-------ataagttgttttcataacctatactgaagtgtttatgaaaataagct 207  Q
    |||||||||||||||  |||||||||||| |||||||||||||| |       ||||| | ||||||||| ||||  |  || | |||||||||||||||    
T  10199530 agttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataagct 10199431  T
Q  208 gaaagcaacttatgaacatgt 228  Q
    |||| ||||||||||||||||    
T  10199430 gaaaacaacttatgaacatgt 10199410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 29007838 - 29007788
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  29007838 agttatttctataacaaaagaaaaattaaagtcaaactattttcatataag 29007788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 30815752 - 30815706
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataagt 166  Q
    |||||||||||||||||||||||| || |||||||||||||||||||    
T  30815752 tttctataacaaaagataaaataaagttaaactattttcatataagt 30815706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 25479534 - 25479649
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatata-------agttgttttcataacctatactgaagtgtttatgaaaataagctgaaag 212  Q
    |||||||||| ||||||||||||| |||||| | | ||||||||       |||||||||||||| |||| ||  || | |||||||||||||||||||     
T  25479534 tttctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaa 25479633  T
Q  213 caacttatgaacatgt 228  Q
    ||||| ||||||||||    
T  25479634 caactaatgaacatgt 25479649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 37240842 - 37240914
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgtaata 232  Q
    |||||| ||||||||||| |||| ||  || ||||||||||||||||||| | || |||||||||||||||||    
T  37240842 tataagctgttttcataaactatccttgagggtttatgaaaataagctgataacatcttatgaacatgtaata 37240914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 15437914 - 15438031
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatat-------aagttgttttcataacctatactgaagtgtttatgaaaataagctgaa 210  Q
    |||||||||||||||| ||||||| | |||||||| |||||| ||       ||||||||||||||  |||| ||  || ||||| | ||||||||||||    
T  15437914 tatttctataacaaaaaataaaattaagtcaaactgttttcaaatcagccagaagttgttttcataggctatcctcgagagtttacggaaataagctgaa 15438013  T
Q  211 agcaacttatgaacatgt 228  Q
    || |||||||||||||||    
T  15438014 agtaacttatgaacatgt 15438031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 431
Target Start/End: Complemental strand, 23373323 - 23373260
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagta 431  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||  |||| |||| ||||||    
T  23373323 tggacatgtcataagttgtttctataagctctcccaaacaatctcacaagtgcttatatcagta 23373260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 37818397 - 37818460
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    ||||||||| |||| ||||||||||||||||| ||||||||  | |||||||||||||| ||||    
T  37818397 aagtgcttatgtataagttatttctataacaagagataaaacgaagtcaaactattttcgtata 37818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 42352025 - 42351982
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  42352025 tatttctataacaaaagttaaaataaagtcaaactattttcata 42351982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 45107556 - 45107622
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||||||  ||| || ||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  45107556 aagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataagtt 45107622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 49517013 - 49517068
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| ||||||||||||||||||||||||||||| |||||| | ||||||| ||||    
T  49517013 gtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaag 49517068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 14737827 - 14737781
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||    
T  14737827 agttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 23373424 - 23373366
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||| || |||||||||| ||||||||||||||| ||||| || ||||||||    
T  23373424 tgcttacgtattagctatttctatatcaaaagataaaataaagtcaatctgttttcata 23373366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 45804204 - 45804274
Alignment:
Q  94 ttaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||| |||||||||  ||  |||||||||||||| |||  ||||||||| ||||||||||||||||||||    
T  45804204 ttaattaagtgcttatataaaagttatttctataataaataataaaataaagtcaaactattttcatataa 45804274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 2522596 - 2522697
Alignment:
Q  127 aacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacat 226  Q
    ||||||||||||||||| || |||||  ||| ||||||| ||||||||||| |||| ||| ||  |||||| ||||||| ||||| ||| ||| | ||||    
T  2522596 aacaaaagataaaataaagttaaactgattttatataagctgttttcataaactattctggagaatttatggaaataagttgaaaacaaattacggacat 2522695  T
Q  227 gt 228  Q
    ||    
T  2522696 gt 2522697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 2773723 - 2773614
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaact 217  Q
    |||||| |||||| ||||||||||||| ||||| | |||| ||||||| ||||||||||| | ||  ||||| | || | |||||||||| ||| ||| |    
T  2773723 tatttccataacagaagataaaataatttcaaattgttttaatataagctgttttcataagccattttgaagagcttctaaaaataagcttaaaacaaat 2773624  T
Q  218 tatgaacatg 227  Q
    |||| |||||    
T  2773623 tatggacatg 2773614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 4363745 - 4363704
Alignment:
Q  124 tataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  4363745 tataacaaaagattaaataatgtcaaactgttttcatataag 4363704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 6976885 - 6976942
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||| |||| || ||||||||||||||||||||| |||| || ||||||||||||||    
T  6976885 gcttatgtataagatatttctataacaaaagataagataaagttaaactattttcata 6976942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 17269183 - 17269248
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| ||||||||||| ||||||||  ||||||| |||||| | ||||||||||||    
T  17269183 aagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataag 17269248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 28467420 - 28467379
Alignment:
Q  124 tataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataag 28467379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 41516189 - 41516140
Alignment:
Q  128 acaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||||||||||| || ||||||||||||||||||||| | |||||||||    
T  41516189 acaaaagataaaagaaagtcaaactattttcatataagctattttcataa 41516140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 42336596 - 42336661
Alignment:
Q  101 agtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagt 166  Q
    |||||||| ||||  ||||||| |||||||||| ||||||||| ||||| | ||||||||||||||    
T  42336596 agtgcttatgtataggttatttttataacaaaaaataaaataaagtcaagcaattttcatataagt 42336661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 45234146 - 45234191
Alignment:
Q  116 gttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||    
T  45234146 gttatttctataataaaagataaaataaagtcaaattattttcata 45234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 45999425 - 45999360
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||| | |||| || ||||||||||||||||||||| |||| ||||||||  |||||||||||    
T  45999425 aagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataag 45999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 11893665 - 11893602
Alignment:
Q  157 tcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 221  Q
    ||||||||||||||| ||||| ||||  ||||| ||||||| ||||||||||||| |||||||||    
T  11893665 tcatataagttgttt-cataagctattttgaagagtttatggaaataagctgaaaacaacttatg 11893602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 24146397 - 24146334
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    |||||||||| |||| |||||||||||||||||||| | |||| |  ||||||||||||||||||    
T  24146397 caagtgcttatgtataagttatttctataacaaaag-tcaaatgaaatcaaactattttcatata 24146334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 34290236 - 34290304
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||| ||||||||||| ||||  |||||   ||||||||||||||||||| ||||||||||| ||||    
T  34290236 tataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgt 34290304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 40485780 - 40485720
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagta 431  Q
    |||||||||||| ||||||||||||||||| |||||| |||||  |||| |||||| ||||    
T  40485780 acatgtcataagatgtttcaataagttctcccaaacagtctcacaagtgcttatgtaagta 40485720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 219
Target Start/End: Original strand, 45205001 - 45205127
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatat-------aagttgttttcataacctatactgaagtgt 192  Q
    |||||| || ||||||  ||| ||||| | |||||||||||||| |||||||||||| |||||       ||||||||||||||| ||||  || || ||    
T  45205001 aagtgcgtatgtatgaaatatatctatgataaaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagt 45205100  T
Q  193 ttatgaaaataagctgaaagcaactta 219  Q
    | ||| ||||||||||||| |||||||    
T  45205101 tcatggaaataagctgaaaacaactta 45205127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 431
Target Start/End: Complemental strand, 4034027 - 4033964
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagta 431  Q
    |||||| |||||||||| |||  ||||| |||||||||||||||||  |||||||||| |||||    
T  4034027 tggacaagtcataagttattttcataagctctctcaaacaatctcacaagtgtttatgccagta 4033964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 4202266 - 4202227
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaa 139  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  4202266 aagtgcttaagtataagttatttctataacaaaagataaa 4202227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 7707167 - 7707211
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||    
T  7707167 agttatttcgataacaaaagataaaata--gtcaaactattttcata 7707211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 157
Target Start/End: Complemental strand, 9507119 - 9507080
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactatttt 157  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  9507119 tatttctataacaaaagttaaaataatgttaaactatttt 9507080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 437
Target Start/End: Original strand, 15581316 - 15581383
Alignment:
Q  370 gacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataag 437  Q
    |||||||||||||||||||| || || |||  ||||||||||||  |||| ||||||||||| |||||    
T  15581316 gacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataag 15581383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 26780001 - 26779934
Alignment:
Q  154 ttttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 221  Q
    ||||| |||||||||||||||||| ||||  |||||   ||||||||||||| ||||| |||||||||    
T  26780001 ttttcctataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaacttatg 26779934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 30257646 - 30257751
Alignment:
Q  130 aaaagataaaataatgtcaaactattttcatataag-------ttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatga 222  Q
    |||||||||||||| |||||||| ||| ||||||||       |||||||||||| |||| ||| || | ||||  ||||||||||||| || |||||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatga 30257745  T
Q  223 acatgt 228  Q
    ||||||    
T  30257746 acatgt 30257751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 36641823 - 36641858
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaa 150  Q
    ||||||||||||||||||||||||||||| ||||||    
T  36641823 agttatttctataacaaaagataaaataaagtcaaa 36641858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 37593806 - 37593686
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaa 199  Q
    ||||| ||| |||| || ||||||||||||| ||||||||||||||| | | | ||||| |||        ||||||| ||||  ||||| | |||||||    
T  37593806 aagtgtttatgtataaggtatttctataacacaagataaaataatgttagattgttttcgtat--------ttcataagctattttgaagagcttatgaa 37593715  T
Q  200 aataagctgaaagcaacttatgaacatgt 228  Q
    |||||||||||| || |||||||||||||    
T  37593714 aataagctgaaaacagcttatgaacatgt 37593686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 39348037 - 39347970
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatg 227  Q
    |||||||||||||||||| |||| ||| |  | ||||| ||||||||||||| ||||||||| |||||    
T  39348037 tataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatggacatg 39347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 52286629 - 52286676
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| ||||||||||||||||| || |||| |||||||||||||    
T  52286629 tatttctacaacaaaagataaaataaagttaaacaattttcatataag 52286676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 1879145 - 1879099
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||| |||||||||||| |||||| | ||||||||||||    
T  1879145 atttctataacagaagataaaataaagtcaaaatgttttcatataag 1879099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 4200177 - 4200227
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| |||||||||||||||||||| |||||  | ||||||||||||    
T  4200177 agttatttttataacaaaagataaaataaagtcaagttgttttcatataag 4200227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 4622041 - 4622091
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||| |||| |  ||||||| ||||||||||||    
T  4622041 agttatttctataacaaaagatcaaatgaattcaaactcttttcatataag 4622091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 11211066 - 11211116
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||| ||||||||||||||||| || ||| | ||||||||||||    
T  11211066 agttatttctagaacaaaagataaaataaagttaaatttttttcatataag 11211116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 11560716 - 11560645
Alignment:
Q  74 tgtttggataaacaacttaattaatc----aagtgcttacgtatgagttatttctataacaaaagataaaat 141  Q
    ||||||||||||||||||||||||||    ||||| ||| |||| || ||||| |||| |||||||||||||    
T  11560716 tgtttggataaacaacttaattaatcatttaagtgtttaggtataagctatttttatagcaaaagataaaat 11560645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 15361615 - 15361711
Alignment:
Q  73 ttgtttggataaacaacttaattaat--caagtgcttacgtatgagttatttctataacaaa--agataaaataatgtcaaactattttcatataag 165  Q
    |||||| ||||||||||||| ||| |  |||||||||| || | |  |||||||||||||||  ||||||| ||| |||||| ||||||||||||||    
T  15361615 ttgtttagataaacaacttacttattagcaagtgcttatgtgtaaactatttctataacaaagaagataaagtaaagtcaaattattttcatataag 15361711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 17631220 - 17631178
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    |||||||||||||||||||||||||| ||| |||| |||||||    
T  17631220 tatttctataacaaaagataaaataaagtctaactgttttcat 17631178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 182
Target Start/End: Complemental strand, 23370435 - 23370353
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    |||| ||||||||| || ||||||||| ||||||||||||| || || || ||  |||||||||||  |||||||||| ||||    
T  23370435 aagtacttacgtataagctatttctattacaaaagataaaacaaagtgaagctggtttcatataagcagttttcataagctat 23370353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 30285842 - 30285888
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||||||    
T  30285842 tatttctataacaaaagttaaaataaagtcaatcaattttcatataa 30285888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 31517747 - 31517681
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataag 437  Q
    ||||||||| ||||||||  |||||||||| |||||| |||||  |||| ||||| |||||||||||    
T  31517747 acatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaataag 31517681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 33527266 - 33527220
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||| ||||||||||||||||  |||||||| |||||||||||    
T  33527266 tatttctaaaacaaaagataaaatacagtcaaactgttttcatataa 33527220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 35080188 - 35080142
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||| ||||||||| |||||||| ||| ||||||||    
T  35080188 atttctataacaaaaaataaaataaagtcaaactgtttccatataag 35080142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 43420209 - 43420259
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttg 168  Q
    |||||| ||||| ||||||||||||| |||||||| |||| ||||||||||    
T  43420209 tatttccataacgaaagataaaataaagtcaaactttttttatataagttg 43420259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 49521812 - 49521770
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    ||||||||||||||||||| | ||| |||||||||||||||||    
T  49521812 acatgtcataagttgtttccacaagctctctcaaacaatctca 49521770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 3224947 - 3224980
Alignment:
Q  149 aactattttcatataagttgttttcataacctat 182  Q
    ||||||||||||||||||||||||||||| ||||    
T  3224947 aactattttcatataagttgttttcataaactat 3224980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 413
Target Start/End: Complemental strand, 4363640 - 4363599
Alignment:
Q  372 catgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    |||||||||||||||||| |||||  ||||||||||||||||    
T  4363640 catgtcataagttgtttcgataagcgctctcaaacaatctca 4363599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 5592755 - 5592694
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 221  Q
    |||||||||||||||||| |||  || ||| | |||||||||||||||| || |||||||||    
T  5592755 tataagttgttttcataagctagtcttaagagcttatgaaaataagctggaaacaacttatg 5592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 6074415 - 6074472
Alignment:
Q  108 acgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| || ||||||||||||||||||| | |||| || ||||| ||||||||||||    
T  6074415 acgtataagctatttctataacaaaagatgatataaagttaaactgttttcatataag 6074472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 7200979 - 7200914
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||| |||| ||| || |||||| |||| |||||||||||||| ||||||| ||| |||||||||    
T  7200979 aagtgtttacttataagctatttccataataaaagataaaataaagtcaaacgattatcatataag 7200914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 15361073 - 15361106
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaacat 226  Q
    ||||||||||||||||||| ||||||||||||||    
T  15361073 ttatgaaaataagctgaaaacaacttatgaacat 15361106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 16322800 - 16322849
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||| |||||    
T  16322800 tatttttatatcaaaagataaaatatagtcaaactattttcatagaagtt 16322849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 23895287 - 23895332
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    ||||||||||||||||||||||||||  ||||||| || |||||||    
T  23895287 tatttctataacaaaagataaaataaattcaaactgttctcatata 23895332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 439
Target Start/End: Original strand, 24279811 - 24279880
Alignment:
Q  370 gacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagtt 439  Q
    |||||||||||||||||||| ||| |||| | ||| || |||||  ||||||||||  ||||||||||||    
T  24279811 gacatgtcataagttgtttccataggttcccccaatcagtctcacaagtgtttatgctagtaaataagtt 24279880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 27738297 - 27738252
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| ||||||||||||||||| |||||| | ||||||||||||    
T  27738297 tttctacaacaaaagataaaataaagtcaaattgttttcatataag 27738252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 32927155 - 32927238
Alignment:
Q  135 ataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttat 220  Q
    ||||||||| || |||||||||| |||||||||||||||||||  |||| ||  ||| ||||||||| ||| ||||| ||||||||    
T  32927155 ataaaataa-gttaaactatttttatataagttgttttcataaattata-tgttgtgcttatgaaaaaaagatgaaaacaacttat 32927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 36151624 - 36151575
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||| ||||||||||||||||||| |||||| | ||||| ||||||||    
T  36151624 tatttcaataacaaaagataaaataaagtcaaattgttttcgtataagtt 36151575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 44032116 - 44032071
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||| |||||||| |||||| | ||||||||||||    
T  44032116 tttctataacaaaagctaaaataaagtcaaattgttttcatataag 44032071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 49557084 - 49557117
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataa 143  Q
    |||| |||||||||||||||||||||||||||||    
T  49557084 gtataagttatttctataacaaaagataaaataa 49557117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 50998489 - 50998550
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||| |||| || ||||||| ||||||||||||||| ||  |||||||| |||||||||||    
T  50998489 gcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataag 50998550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 1730825 - 1730881
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattt 156  Q
    ||||||||| |||| || ||||| | |||| ||||||||||||| ||||||||||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaaactattt 1730881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 4576805 - 4576873
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||| ||||||||||| ||||| ||||    ||||||||||||||||||  |||||||| |||||||    
T  4576805 tataagctgttttcataagctatattgaataacttatgaaaataagctgaacacaacttataaacatgt 4576873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 169
Target Start/End: Original strand, 5150850 - 5150939
Alignment:
Q  76 tttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgt 169  Q
    |||||||| |||||||||||||     |||||| |||| || ||| |||| |  |||| ||||||||| |||||||||||||||| ||||||||    
T  5150850 tttggatacacaacttaattaaa----tgcttatgtattagctatatctacaggaaaatataaaataaagtcaaactattttcatttaagttgt 5150939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 5756815 - 5756759
Alignment:
Q  108 acgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||| || ||||||||||||||||||| | |||| || ||||| |||||||||||    
T  5756815 acgtataagctatttctataacaaaagatgatataaagttaaactgttttcatataa 5756759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 7218144 - 7218080
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaac 224  Q
    ||||||||||||||||||||||| ||| ||   ||||||||||||| ||||| || ||| |||||    
T  7218144 tataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaac 7218080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 7262588 - 7262520
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||| ||||||||| |||| |||||| | || || ||||||| ||||| || |||||||||||||    
T  7262588 tataagttcttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgt 7262520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 7274073 - 7274009
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||| ||||  ||||||| ||||||||||||| |||||| |||||| | |||||||| |||||    
T  7274073 tgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcatacaagtt 7274009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 9656600 - 9656648
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||| ||||| ||||||||| || ||| ||||||||||||||    
T  9656600 ttatttctatagcaaaaaataaaataaagttaaattattttcatataag 9656648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 15488892 - 15488952
Alignment:
Q  105 cttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||| |||| ||||||| | ||||||||| |||| ||||||||||||| |||||||    
T  15488892 cttatgtataagttgtttctatgataaaagataacataaagtcaaactatttttatataag 15488952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 25719485 - 25719545
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataac 178  Q
    ||||||| ||| ||||||| |||||| || |||||||||||||||| | | ||||||||||    
T  25719485 tatttctgtaataaaagatgaaataaagtaaaactattttcatatatgcttttttcataac 25719545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 28689489 - 28689421
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaacagt 261  Q
    ||||||||||||||||||| ||||||||| |||||| |||  | ||||||  ||| ||||| |||||||    
T  28689489 ttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagttctctaaaacagt 28689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 37175989 - 37175949
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttc 158  Q
    |||||||||||| |||| |||||||| ||||||||||||||    
T  37175989 tatttctataaccaaaggtaaaataaagtcaaactattttc 37175949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 37842425 - 37842357
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||||||||||||| ||||  |||||   |||| |||||||||||||| |  |||||||||||||    
T  37842425 tataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgt 37842357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 38503502 - 38503470
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaaca 225  Q
    ||||||||||||||||||| |||||||||||||    
T  38503502 ttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 40304188 - 40304124
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||| |||| || ||||| ||||||||||||||||||||  ||| | | ||||||||||||||    
T  40304188 tgcttaggtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagtt 40304124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 44940341 - 44940408
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||||||||||||| |||| |||||| | || || |||||||||||||  |||||||| ||||||    
T  44940341 tataagttgttttcataatctatcctgaagaggttgtggaaataagctgaaa-aaacttatggacatgt 44940408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 46980251 - 46980199
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||| ||| |||| ||||||||||||||| | |||||| ||||||||||||||    
T  46980251 agttgtttttatatcaaaagataaaataaagacaaactgttttcatataagtt 46980199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 48064261 - 48064309
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||| ||||||||||||||| || ||||||||||  ||||||||    
T  48064261 atttctatagcaaaagataaaataaagtaaaactatttttgtataagtt 48064309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 48282066 - 48282134
Alignment:
Q  100 aagtgcttacgtatgagttatttctataaca-aaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||| |||  || ||||||||||| | ||||||||||||| |||||||||||||| | ||||||    
T  48282066 aagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttcctttaagtt 48282134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 50319230 - 50319274
Alignment:
Q  105 cttacgtatgagttatttctataacaaaagataaaataatgtcaa 149  Q
    |||| |||| || |||||||||||||||||||||||||| |||||    
T  50319230 cttatgtataagctatttctataacaaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 52559965 - 52559901
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||| | |||| | |||| |||||||||||| ||||||||| |||||| ||||||| |||||    
T  52559965 aagtgctcatgtataaattatatctataacaaaatataaaataaagtcaaattattttcgtataa 52559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 11494102 - 11494208
Alignment:
Q  116 gttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaa 215  Q
    |||||||  |||||||||||||| |||| |||||||| |||||||||||  | ||||||||| ||||  ||||| | ||||||||||||||||||||||     
T  11494102 gttattttcataacaaaagataacataaagtcaaacttttttcatataaactattttcataagctatcttgaagagcttatgaaaataagctgaaagcag 11494201  T
Q  216 cttatga 222  Q
    |||||||    
T  11494202 cttatga 11494208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 12225058 - 12224974
Alignment:
Q  74 tgtttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatat 162  Q
    ||||||||||||||||||||||||    | ||||| |||| |||||||||||  |||||||||||||||| ||||||||||||||||||    
T  12225058 tgtttggataaacaacttaattaa----gagcttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttcatat 12224974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 2100758 - 2100813
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcat 175  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  2100758 tttctatagcaaaagataaaataaagtcaaaatattttcatataagttgttttcat 2100813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 158 - 261
Target Start/End: Complemental strand, 11569529 - 11569426
Alignment:
Q  158 catataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaa 257  Q
    |||||||| ||||||||||| ||||  || || | || |||||||||||||||| ||||||||| |||||| |||  | ||||||| |||||||||||||    
T  11569529 catataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaa 11569430  T
Q  258 cagt 261  Q
    ||||    
T  11569429 cagt 11569426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 26215433 - 26215511
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    ||||| |||| || |||||||||||||||||||||||||| || ||||||||||| |||||  ||||||||||| ||||    
T  26215433 gcttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataatatgttttcataagctat 26215511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 26820112 - 26820189
Alignment:
Q  75 gtttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactatttt 157  Q
    |||||||||||||||| |||||| |    ||||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  26820112 gtttggataaacaactcaattaagc----gctta-gtataagttatttctataacaaaagataaaataaagtcaaactatttt 26820189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 27728140 - 27728094
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  27728140 tatttctataaaaaaagataaaataaagtcaaactattttcatataa 27728094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 2699254 - 2699306
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||| ||||||| ||||||||| || ||||||||||||||||||||    
T  2699254 agttatttctacaacaaaatataaaataaagttaaactattttcatataagtt 2699306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 8799354 - 8799394
Alignment:
Q  116 gttatttctataacaaaagataaaataatgtcaaactattt 156  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  8799354 gttatttctataacaaaagataaaataaagtcaaactattt 8799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 165
Target Start/End: Complemental strand, 13410356 - 13410267
Alignment:
Q  72 cttgtttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||||||| |    ||| |||| |  || || || |||||||| ||||||||||| ||||||||||||||||||    
T  13410356 cttgtttggataaacaacttaattaatcca----ttatgtataaactacttttacaacaaaagttaaaataatgttaaactattttcatataag 13410267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 6875379 - 6875321
Alignment:
Q  120 tttctataaca--aaagataaaataatgtcaaactattttcatataagttgttttcata 176  Q
    |||||||||||  ||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  6875379 tttctataacataaaagacaaaataaagtcaaactattttcatataagttattttcata 6875321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 221
Target Start/End: Complemental strand, 10079182 - 10079079
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaact 217  Q
    ||||||||| | |||||||||||| | |||||||| ||||| |||||| ||||||||| | |||| ||| |  ||||||| ||| ||||| ||| |||||    
T  10079182 tatttctatgataaaagataaaatgaagtcaaactgttttcgtataagctgttttcatgagctattctggaaagtttatggaaagaagcttaaaacaact 10079083  T
Q  218 tatg 221  Q
    ||||    
T  10079082 tatg 10079079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 11188292 - 11188225
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||   ||||||||||| |||| ||||    
T  11188292 aagtgcttatgtataagttgtttctataacaaaagataaaataaaaccaaactatttttatattagtt 11188225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 25867037 - 25867084
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  25867037 tatttctataacaaaagatgaaataaagtcaaaatattttcatataag 25867084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 1470975 - 1470867
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcata-------taagttgttttcataacctatactgaagtgtttatgaaaataagctgaa 210  Q
    ||||||||||| |||||||||||||| |||||| || |||||||       |||| ||||||||||||||||  ||||  ||||| ||||||||| ||||    
T  1470975 tatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctatcatgaaaagtttaggaaaataagatgaa 1470876  T
Q  211 agcaactta 219  Q
    | |||||||    
T  1470875 aacaactta 1470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 38561674 - 38561716
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactatttt 157  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  38561674 agttatttatataacaaaagataaaataaagtcaaactatttt 38561716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 40728540 - 40728498
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactatttt 157  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  40728540 agttatttctataacaaaagataaaataaagtcaaactgtttt 40728498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 31875605 - 31875548
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatg 425  Q
    |||||||||||||||||||||| ||||| | ||||||||| | ||| |||||||||||    
T  31875605 tggacatgtcataagttgtttccataagctttctcaaacagtgtcactagtgtttatg 31875548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 34563183 - 34563244
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    |||||||||  ||| |||||||||||| ||||| |||||||||| ||||||| |||||||||    
T  34563183 aagtgcttatatataagttatttctatgacaaaggataaaataaagtcaaacaattttcata 34563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 28769473 - 28769343
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt-------gttttcataacctatactgaagtgttta 195  Q
    |||||| |||| || |||| ||||||||||  ||||||| | |||||||||||||| |||||| |       |||||||||| ||||  || || |||||    
T  28769473 tgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagttta 28769374  T
Q  196 tgaaaataagctgaaagcaacttatgaacat 226  Q
    || ||||||||||||| ||||||||| ||||    
T  28769373 tggaaataagctgaaaacaacttatggacat 28769343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 29699202 - 29699254
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||||||||||||||||||| |||||| | || |||| ||||||    
T  29699202 agttatttctataacaaaagataaaataaagtcaaaatgttgtcatctaagtt 29699254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 29973014 - 29973132
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttca-------tataagttgttttcataacctatactgaagtgt 192  Q
    |||||||||  ||| || ||||||| ||||| ||| |||||||| |||||||||||||||       |||||||||||||||||| |||| ||  || ||    
T  29973014 aagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagt 29973113  T
Q  193 ttatgaaaataagctgaaa 211  Q
    ||||| |||||| ||||||    
T  29973114 ttatggaaataaactgaaa 29973132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 41620429 - 41620365
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    ||||||||||  ||| |||||||| | |||||||||||||||||| |||||| ||| ||||||||    
T  41620429 caagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatata 41620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 1112784 - 1112851
Alignment:
Q  98 tcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||| ||||  | |||||||||||||||||||||||||| || ||| | |||||| |||||    
T  1112784 tcaagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataag 1112851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 4558731 - 4558794
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    ||||| ||| |||| || ||||||||||| |||||||||||||| || ||| ||||||||||||    
T  4558731 aagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatata 4558794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 30389132 - 30389167
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30389132 ttatgaaaataagctgaaaacaacttatgaacatgt 30389167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 407
Target Start/End: Complemental strand, 30988001 - 30987962
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaaca 407  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  30988001 tggacatgtcataagttgtttccataagctctctcaaaca 30987962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 35453740 - 35453693
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||| ||||||||||||||||| || |||||| |||||||||||||    
T  35453740 tttctacaacaaaagataaaataaagttaaactagtttcatataagtt 35453693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 44348438 - 44348485
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||  ||||| |||||| ||||||||||||||    
T  44348438 tatttctataacaaaagatgtaataaagtcaaaatattttcatataag 44348485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 10437837 - 10437875
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactatttt 157  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  10437837 atttctataacaaaagataaaataaagtcaaactgtttt 10437875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 152
Target Start/End: Complemental strand, 11119118 - 11119084
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaact 152  Q
    |||||||||||||||||||||||||| ||||||||    
T  11119118 tatttctataacaaaagataaaataaagtcaaact 11119084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 14482135 - 14482185
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaa 150  Q
    ||||||||| |||| |  |||||||||||||||||||||||||| ||||||    
T  14482135 aagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaa 14482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 14949820 - 14949882
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||| |||| |||| || || ||||||||||||||||||||||  |||||||| ||||||||    
T  14949820 caagttcttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcata 14949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 30277316 - 30277254
Alignment:
Q  159 atataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 221  Q
    ||||||| ||||||||||| |||| ||  || ||||||| ||||||||||||| |||||||||    
T  30277316 atataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatg 30277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 31862441 - 31862491
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||||||||||||| |||| ||||||||||| || ||||||    
T  31862441 agttatttcaataacaaaagataatataaagtcaaactattctcgtataag 31862491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 34788561 - 34788499
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||| || ||||| ||| || ||||||||||||| |||||||| ||| ||||||||    
T  34788561 tgcttacgtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataag 34788499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 152
Target Start/End: Complemental strand, 39392780 - 39392746
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaact 152  Q
    |||||||||||||||||||||||||| ||||||||    
T  39392780 tatttctataacaaaagataaaataaagtcaaact 39392746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 44865702 - 44865636
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtca-aactattttcatataag 165  Q
    |||||||||| ||| || |||||||||  |||||||| ||||||||||| ||| |||||||||||||    
T  44865702 aagtgcttacttataagctatttctatcgcaaaagattaaataatgtcagaacgattttcatataag 44865636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 3645953 - 3645888
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||  |||| || ||||||||||| |||| |||||| ||  ||||||||||||||||||||    
T  3645953 aagtgcttgtgtataagctatttctataagaaaatataaaacaaaatcaaactattttcatataag 3645888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 5383128 - 5383173
Alignment:
Q  137 aaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    ||||||| |||||| | |||||||||||||||||||||||| ||||    
T  5383128 aaaataaagtcaaattgttttcatataagttgttttcataagctat 5383173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 8066821 - 8066772
Alignment:
Q  179 ctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||| || |||||||||||||||||||||  |||||||| ||||||    
T  8066821 ctatactgtagagtttatgaaaataagctgaaaaaaacttatggacatgt 8066772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 9836973 - 9836924
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||| ||||||||  |||||| ||| |||||||||||||||||||||||    
T  9836973 tatttttataacaactgataaagtaaagtcaaactattttcatataagtt 9836924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 9956884 - 9956819
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaaca 225  Q
    |||||||||||||||||| ||||  || ||   ||||||||||||||||||| | |||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 11056792 - 11056739
Alignment:
Q  112 atgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||| |||||||||||||||||  ||||||| ||  |||||||||||||||||    
T  11056792 atgagctatttctataacaaaaggaaaaataaagttgaactattttcatataag 11056739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 228
Target Start/End: Original strand, 11493932 - 11494033
Alignment:
Q  127 aacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacat 226  Q
    ||||||||||||| ||| |||||| | |||| |||| || | ||||||||  ||||  ||||| | |||||||| |||||||||  || |||||||||||    
T  11493932 aacaaaagataaagtaaagtcaaagtttttttatatgagctattttcatacgctatcttgaagagcttatgaaagtaagctgaacacagcttatgaacat 11494031  T
Q  227 gt 228  Q
    ||    
T  11494032 gt 11494033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 14929253 - 14929192
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||| || || ||||||||||| |||||| ||||||  |||||||| ||||||||    
T  14929253 aagtgcttacgcataagctatttctataataaaagacaaaatagagtcaaactgttttcata 14929192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 20672757 - 20672818
Alignment:
Q  167 tgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||| |||| |||| ||| || | ||||||||||||||||||| || |||||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgt 20672818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 29262991 - 29262946
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| | |||||||||||| |||||| ||||||||||||||    
T  29262991 tttctataatagaagataaaataaagtcaaattattttcatataag 29262946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 413
Target Start/End: Original strand, 29699333 - 29699378
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    |||||||| ||||||||||||| |||||||||| |||||| |||||    
T  29699333 tggacatgccataagttgtttctataagttctcccaaacagtctca 29699378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 30191211 - 30191110
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaaca 259  Q
    |||||| | |||| |||| |||| ||||| |||||||| ||||||||||||| ||| || ||||||||| |||    ||||||| ||||||||  |||||    
T  30191211 tataagctattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaaca 30191112  T
Q  260 gt 261  Q
    ||    
T  30191111 gt 30191110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 33714352 - 33714315
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactatttt 157  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  33714352 tttctataacacaagataaaataaagtcaaactatttt 33714315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 2488015 - 2487955
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagta 431  Q
    |||||| |||||||||||  |||||||||| |||||| |||||  |||| |||||||||||    
T  2488015 acatgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagta 2487955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 2605970 - 2606018
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagt 166  Q
    ||||||||| |||||||||||||| | ||||||||||||  ||||||||    
T  2605970 tatttctatgacaaaagataaaattaagtcaaactatttctatataagt 2606018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 4281578 - 4281614
Alignment:
Q  192 tttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  4281578 tttatgaaaataagatgaaaacaacttatgaacatgt 4281614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 5069730 - 5069798
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaacagt 261  Q
    |||||||||||||||||||   |||||||||||||| |||    ||||||| ||||||||| |||||||    
T  5069730 ttatgaaaataagctgaaaatgacttatgaacatgttataagatgtttccataagctctctcaaacagt 5069798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 5071099 - 5071035
Alignment:
Q  105 cttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgt 169  Q
    |||| |||| |||| ||||||||  |||| ||||||||| |||||||| ||||||||||| ||||    
T  5071099 cttatgtataagttgtttctatagtaaaatataaaataaagtcaaacttttttcatataacttgt 5071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 10722582 - 10722641
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    |||||| ||||||||| ||||||||||  | ||| ||||||||||||||| ||||||||||    
T  10722582 ttatttatataacaaa-gataaaataaactaaaattattttcatataagtagttttcataa 10722641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 27320249 - 27320304
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattt 156  Q
    |||||||||||||| || |||| ||||| |||||||| |||||| ||||||||||||    
T  27320249 aagtgcttacgtataagctattcctatagcaaaagat-aaataaagtcaaactattt 27320304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 27754404 - 27754464
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttat 220  Q
    ||||||| |||||||||| ||||  || || | |||||||||||||||||| |||||||||    
T  27754404 tataagtggttttcataagctattttggagagcttatgaaaataagctgaacgcaacttat 27754464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 40357856 - 40357908
Alignment:
Q  124 tataacaaaagataaaataatgtcaaactattttcatataagttgttttcata 176  Q
    |||||||||||||||||||| || ||| |||||||||| | | ||||||||||    
T  40357856 tataacaaaagataaaataaagtaaaattattttcataaatgctgttttcata 40357908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 42597334 - 42597394
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    |||| |||| |||| || |||||||||||||||||||||||||| || ||| | |||||||    
T  42597334 aagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcat 42597394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 8130107 - 8130172
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||    
T  8130107 aagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcatataag 8130172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 228
Target Start/End: Complemental strand, 4798723 - 4798568
Alignment:
Q  74 tgtttggataaacaacttaattaa-tcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgtttt 172  Q
    |||| ||||||||||||| ||||| | ||||||||| |||| || |||||||||| ||||||||||||||| ||| || | ||||| |  ||||||||||    
T  4798723 tgttcggataaacaacttgattaaattaagtgcttatgtataagctatttctatatcaaaagataaaataaagtctaaatgttttcctgcaagttgtttt 4798624  T
Q  173 cataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||| ||||  || || | ||||| ||||||||| ||| || |||||| ||||||    
T  4798623 cataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgt 4798568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 47800580 - 47800674
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    ||||||||||||||||||||||||||| || ||| | ||||  |||||| ||||||||||| ||||  ||||| | |||||||||||||||||||    
T  47800580 ttatttctataacaaaagataaaataaagttaaaatgtttttgtataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaa 47800674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 49219073 - 49219200
Alignment:
Q  101 agtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttca-------tataagttgttttcataacctatactgaagtgtt 193  Q
    |||| ||| |||| ||||||||||||||||||| ||||||||| |||||| ||||||||       |||||||||||||||||| ||||  | ||| | |    
T  49219073 agtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagat 49219172  T
Q  194 tatgaaaataagctgaaagcaacttatg 221  Q
    |||| ||||||||||||| |||||||||    
T  49219173 tatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 24929444 - 24929560
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttca-------tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaa 210  Q
    |||||||||||||||||||||||||| ||| |||| ||||||       |||||||||||||||||| || ||||  || | ||||| ||||||||||||    
T  24929444 tatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaa 24929543  T
Q  211 agcaacttatgaacatg 227  Q
    | ||| |||||||||||    
T  24929544 aacaatttatgaacatg 24929560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 23815318 - 23815363
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  23815318 agttatttctataacaaaagataaaataatgtcaaactgttttcat 23815363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 49085940 - 49085989
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  49085940 tatttatataacaaaagataaaataatgtcaaactattttcatacaagtt 49085989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 27406002 - 27406066
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    ||||||||||  |||||||||||||| | |||||||||| |||||||||||||||||||| ||||    
T  27406002 tatttctatagtaaaagataaaataaaggcaaactatttgcatataagttgttttcataaactat 27406066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 50400442 - 50400538
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    ||||||||||  |||||||| |||||||| |||||| | | ||| |||||||||||||||||| ||||  ||||   ||||||||||||||||||||    
T  50400442 agttatttcttcaacaaaagctaaaataaagtcaaattgtgttcgtataagttgttttcataaactatcatgaaaactttatgaaaataagctgaaa 50400538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 439
Target Start/End: Original strand, 2996633 - 2996704
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagtt 439  Q
    |||||||||||||||||||||  ||||| ||||||||||| |||||  |||| |||||||| ||||||||||    
T  2996633 tggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtcaataaataagtt 2996704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 4071833 - 4071880
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  4071833 tatttctataacaaaagataaaataaagtcaaattattttcatataag 4071880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 20936121 - 20936074
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  20936121 tatttctataacaaaagataaaataaagtcaaactattttcatgtaag 20936074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 32724070 - 32724117
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  32724070 tatttctattacaaaagataaaataaagtcaaactattttcatataag 32724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 47970251 - 47970310
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttca 159  Q
    ||||||||| |||| || |||||||||||||||||||||||| | |||||||||||||||    
T  47970251 aagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 4449214 - 4449121
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    |||||||||||| |||||||| |||| ||||||||||||  |||||| || ||||| ||| ||||  ||||| | |||||||||||| ||||||    
T  4449214 tatttctataaccaaagataatataaagtcaaactatttctatataattttttttcctaaactatcttgaagagcttatgaaaataaactgaaa 4449121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 17884019 - 17884134
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt-------gttttcataacctatactgaagtgtttatgaaaataagctgaa 210  Q
    |||||||||||||||||||||||||| || ||| | ||||  ||||||||       |||||||||| ||||| || || | |||||||||| |||||||    
T  17884019 tatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaa 17884118  T
Q  211 agcaacttatgaacat 226  Q
    | ||||||||||||||    
T  17884119 aacaacttatgaacat 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 19422354 - 19422415
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||| |||| ||||||||||||||||||||||| ||||| |||||||  |||||||||||    
T  19422354 tgcttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataa 19422415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 1404373 - 1404468
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttca--tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    ||||||||||| |||||||||||||| |||||| | ||||||  ||||||| |||||||||| ||||  || || | |||||||| ||||||||||    
T  1404373 tatttctataataaaagataaaataaggtcaaattgttttcacttataagtggttttcataaactatcatggagagcttatgaaagtaagctgaaa 1404468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 7694080 - 7694012
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||| |||||||||||  ||| ||| || ||||||| ||||||||||||| ||||||||||||||||    
T  7694080 tataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgt 7694012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 28623222 - 28623274
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaact 152  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||| |||||    
T  28623222 aagtgcttatgtataagttatttatataacaaaagataaaataatgttaaact 28623274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 36734846 - 36734890
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  36734846 tttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 27623586 - 27623633
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||    
T  27623586 tatttgtataacaaaagataaaataaagtcaaactattttaatataag 27623633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 46415929 - 46415862
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||||||||||| || |||||| ||||||||||||||||||   ||||||| |||||||| |||||    
T  46415929 aagtgcttacgtataagctatttcaataacaaaagataaaataggatcaaactgttttcatacaagtt 46415862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 54325156 - 54325109
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  54325156 tatttctattacaaaagataaaataaagtcaaactgttttcatataag 54325109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 54327576 - 54327521
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||| ||||||||||||||||||||| || |||||||| ||||||||||||    
T  54327576 gtataagttgtttctataacaaaagataaaacaaagtcaaactgttttcatataag 54327521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 4191672 - 4191734
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagat-aaaataatgtcaaactattttcata 161  Q
    ||||||||| |||| || ||||||||||||||||||| ||||||| |||||||| ||||||||    
T  4191672 aagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 30024648 - 30024698
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||||||||||||| || ||| | ||||||||||||    
T  30024648 agttatttctataacaaaagataaaataaagtaaaattgttttcatataag 30024698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 35743252 - 35743298
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||||||||||||||||||||| | ||||||| |||||||    
T  35743252 agttatttctataacaaaagataaaataaaggcaaactactttcata 35743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 41701560 - 41701494
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatac 184  Q
    ||||| |||||||||||||||||||| ||||||   |||||||||||| |||||| |||| ||||||    
T  41701560 tatttatataacaaaagataaaataaagtcaaatcgttttcatataagctgttttaataagctatac 41701494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 4663833 - 4663768
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| ||||||||||||||||||  ||||||| | | ||||||||||| |||||||    
T  4663833 aagtgcttatgtataagttatttctataacaaagaataaaatgaagccaaactatttttatataag 4663768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 21593148 - 21593084
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| |  |||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  21593148 aagtgcttatgtataaactatttctataactaaagataaaataaagtc-aactattttcatataag 21593084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 22684635 - 22684570
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctata 183  Q
    ||||||||||||||| | |||||||| |||||| | |||||||||||| |||| |||||| |||||    
T  22684635 tatttctataacaaacggtaaaataaagtcaaattgttttcatataagctgttctcataagctata 22684570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 29263371 - 29263436
Alignment:
Q  161 ataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacat 226  Q
    ||||||||||||||||| |||| ||| || | || || ||||||||||||| ||||||||||||||    
T  29263371 ataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacat 29263436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 46019745 - 46019631
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcata----taagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagc 213  Q
    |||||||| ||||||||| ||||||| | |||||| |||| |||    ||||||||||||||||  ||| | |||| | ||||||| ||||| ||||| |    
T  46019745 tatttctagaacaaaagaaaaaataaagccaaactgtttttatacaagtaagttgttttcataagttatcccgaagagcttatgaatataagttgaaaac 46019646  T
Q  214 aacttatgaacatgt 228  Q
    ||||||| |||||||    
T  46019645 aacttatcaacatgt 46019631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 52735073 - 52735122
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||| |||||||||||||||||| |||||| || |||||||||||||    
T  52735073 tatttctgtaacaaaagataaaataaagtcaaattactttcatataagtt 52735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 54462236 - 54462157
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    |||||||||| |||  || ||||||||||||||  ||| |||||| ||||||||||||||||||  ||||||||||||| ||||    
T  54462236 caagtgcttatgtaaaagctatttctataacaa--gatgaaataaagtcaaactattttcatat--gttgttttcataagctat 54462157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 56007639 - 56007696
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||||| |||||||| ||||||| |||||||| |||| |||||||||||||| ||||    
T  56007639 tttctatgacaaaagaaaaaataaagtcaaactgtttttatataagttgtttttataa 56007696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 11917508 - 11917556
Alignment:
Q  116 gttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||| | |||||||||||||||||| |||||| |||||||||||||    
T  11917508 gttatttttgtaacaaaagataaaataaagtcaaattattttcatataa 11917556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 28232454 - 28232543
Alignment:
Q  72 cttgtttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||| ||||||||||||    |||||| ||||  || |||||||||| ||||||||||||| |  ||||| ||||| ||||||||    
T  28232454 cttgtttggataagcaacttaattaa----gtgcttgcgtacaagctatttctatagcaaaagataaaatcaaatcaaattatttccatataag 28232543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 51044596 - 51044544
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaact 152  Q
    ||||| ||| |||| || |||||||||||||||||||||||||| ||||||||    
T  51044596 aagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaact 51044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 25548196 - 25548137
Alignment:
Q  162 taagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 221  Q
    |||||||||||||||| |||||| | || | ||||||||||||| ||||| |||||||||    
T  25548196 taagttgttttcataaactatacagcagagcttatgaaaataagttgaaaacaacttatg 25548137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 27123360 - 27123317
Alignment:
Q  370 gacatgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||    
T  27123360 gacatgtcataagttgtttccataagctctctcaaacagtctca 27123317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 29194512 - 29194473
Alignment:
Q  128 acaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  29194512 acaaaagataaaataaaatcaaactattttcatataagtt 29194473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 29374006 - 29373959
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||| ||||||||||||||||||| | | ||||||||||    
T  29374006 tatttctataacagaagataaaataatgtcaaaatgtattcatataag 29373959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 30338711 - 30338664
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||| ||||| || ||||| ||||||||||||    
T  30338711 tatttctataacaaaagatagaataaagttaaactgttttcatataag 30338664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 5219615 - 5219573
Alignment:
Q  122 tctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||| |||||||||||||| || |||||||||||||||||    
T  5219615 tctataataaaagataaaataaagttaaactattttcatataa 5219573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 11785234 - 11785272
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactatttt 157  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  11785234 atttctataacaaaagatgaaataaagtcaaactatttt 11785272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 12816998 - 12817040
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    |||||||||||||||||||  |||||||| |||||||||||||    
T  12816998 acatgtcataagttgtttctctaagttctttcaaacaatctca 12817040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 228
Target Start/End: Original strand, 24747353 - 24747387
Alignment:
Q  194 tatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||||||||||||| ||||||||||||||||    
T  24747353 tatgaaaataagctgaaaacaacttatgaacatgt 24747387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 25571298 - 25571364
Alignment:
Q  198 aaaataagctgaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaacagtttc 264  Q
    |||||||||||||| || ||||||||||| | ||| || ||||||| ||| |||| |||||||||||    
T  25571298 aaaataagctgaaaacagcttatgaacatatcataaactgtttccataagttctcctaaacagtttc 25571364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 28615334 - 28615380
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagc 206  Q
    |||||||||||||||||| ||||| ||||| | ||||||||||||||    
T  28615334 tataagttgttttcataagctataatgaagagcttatgaaaataagc 28615380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 39063761 - 39063719
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||    
T  39063761 tatttctattacaaaagataaaacaatgtcaaactgttttcat 39063719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 223
Target Start/End: Complemental strand, 52315234 - 52315204
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaa 223  Q
    |||||||||||||||||||||||||||||||    
T  52315234 ttatgaaaataagctgaaagcaacttatgaa 52315204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 10192235 - 10192284
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||| |||||||||||||| ||||| |||||| | ||||||||||||||    
T  10192235 tatttttataacaaaagatagaataaagtcaaattgttttcatataagtt 10192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 11788740 - 11788773
Alignment:
Q  130 aaaagataaaataatgtcaaactattttcatata 163  Q
    ||||||||||||||||||||| ||||||||||||    
T  11788740 aaaagataaaataatgtcaaaatattttcatata 11788773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 11800907 - 11800940
Alignment:
Q  130 aaaagataaaataatgtcaaactattttcatata 163  Q
    ||||||||||||||||||||| ||||||||||||    
T  11800907 aaaagataaaataatgtcaaaatattttcatata 11800940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Complemental strand, 18628555 - 18628494
Alignment:
Q  376 tcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataag 437  Q
    |||||||||||||  ||||| |||| |||||| |||||  |||||||||||||||| |||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataag 18628494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 24160612 - 24160567
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  24160612 tttctataacaaaagataatataaattcaaactattttcatgtaag 24160567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 30207707 - 30207643
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| ||||  |||| ||||||||||||| |||||||||  ||||||| ||||||||||||    
T  30207707 aagtgcttatgtatatgttagttctataacaaaaaataaaataa-atcaaactgttttcatataag 30207643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 46013419 - 46013370
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||||  ||||||||||||||||| |||||||| |||| |||||||||    
T  46013419 tatttctggaacaaaagataaaataaagtcaaactgtttttatataagtt 46013370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 53626729 - 53626774
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||||||||  ||||| | ||||||||||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataag 53626774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 6979032 - 6978972
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttat 220  Q
    ||||||||||||| |||| | || || ||| ||||||||||||||||||||| || |||||    
T  6979032 tataagttgtttttataagccatcctaaagagtttatgaaaataagctgaaaacagcttat 6978972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 446
Target Start/End: Original strand, 8469041 - 8469085
Alignment:
Q  402 caaacaatctcattagtgtttatgtcagtaaataagttaatccaa 446  Q
    ||||||||||||||||||||||| || ||| |||||| |||||||    
T  8469041 caaacaatctcattagtgtttatctccgtagataagtcaatccaa 8469085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 9509756 - 9509700
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcat 175  Q
    ||||||| ||||||||||||||||| |   || | ||||||||||||||||||||||    
T  9509756 atttctacaacaaaagataaaataaaggtgaattgttttcatataagttgttttcat 9509700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 11389459 - 11389523
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||| |||| | |||||||||||| |||||||||| ||| || ||||| |||| ||||||    
T  11389459 aagtgcttatgtataaattatttctataaaaaaagataaagtaaagttaaactgttttaatataa 11389523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 21593076 - 21593008
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||||| ||||  |||| |||| |||  ||||||||| |||||||||||||||| ||||| |||||||    
T  21593076 tataagtggtttcgataagctatcctggcgtgtttatggaaataagctgaaagcagcttataaacatgt 21593008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 24160915 - 24160983
Alignment:
Q  92 aattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    ||||||| || |||||| |||| || ||||||||||||||| |||||||| | || ||| |||||||||    
T  24160915 aattaattaactgcttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcat 24160983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 24936243 - 24936287
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataat 144  Q
    ||||| ||| |||| ||||||||||||||||||| ||||||||||    
T  24936243 aagtggttatgtataagttatttctataacaaaatataaaataat 24936287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 42461284 - 42461316
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaaca 225  Q
    ||||||||||||||||||| |||||||||||||    
T  42461284 ttatgaaaataagctgaaatcaacttatgaaca 42461316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 50800038 - 50799986
Alignment:
Q  370 gacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgttt 422  Q
    |||||||||||||||||||  || ||||||| ||||||||||||  |||||||    
T  50800038 gacatgtcataagttgtttacattagttctcccaaacaatctcacaagtgttt 50799986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 52926178 - 52926218
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactatttt 157  Q
    ||||||||||||||||||||||||||  |||||||| ||||    
T  52926178 ttatttctataacaaaagataaaatatagtcaaactgtttt 52926218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 55084518 - 55084482
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaacatgta 229  Q
    ||||||||||||||||||| || ||||||||||||||    
T  55084518 ttatgaaaataagctgaaaccagcttatgaacatgta 55084482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 55437403 - 55437346
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    |||||||||||||| |  |||||||| |||||| |||||||||||||| | |||||||||    
T  55437403 tatttctataacaata--taaaataaagtcaaattattttcatataagctattttcataa 55437346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 39591589 - 39591527
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| ||||    
T  39591589 agttatttctataacaaaagataaaataaagtcaaattgttttcatataagttgttttgataa 39591527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 18749928 - 18749865
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||| ||||    
T  18749928 atttctataacaaaagataaagtaaagtcaaactatttttatataagctgttttcataagctat 18749865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 36537971 - 36538025
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatg 425  Q
    ||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  36537971 acatgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatg 36538025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 145 - 243
Target Start/End: Original strand, 39345456 - 39345554
Alignment:
Q  145 gtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgtaatacacggtttcca 243  Q
    |||||||| |||||||||||| |||||||| || |||| |||| |   ||||| ||||||||||||||||||||||| |||||| ||| || |||||||    
T  39345456 gtcaaactgttttcatataagctgttttcaaaagctatcctgacgaccttatggaaataagctgaaagcaacttatggacatgtcataaactgtttcca 39345554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 992003 - 992068
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||| |||| |||||||||||||| ||||||||| | |||| ||||||||||||||    
T  992003 aagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataag 992068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 33894556 - 33894620
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| || |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  33894556 aagtgcttatgtataagctatttctataacaaaagataaaataa-gtcaaactgttttcatataag 33894620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 26935669 - 26935564
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaact 217  Q
    ||||| ||||||||| |||||||||| || ||| | ||||||||| || | ||||||||| |||| || ||| | ||||| ||||||||||||| || ||    
T  26935669 tatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataagctgaaaacagct 26935570  T
Q  218 tatgaa 223  Q
    ||||||    
T  26935569 tatgaa 26935564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 24363671 - 24363603
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||||||||||||| |||| ||| || | ||||| ||||||||||||| ||||||||| ||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgt 24363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 45593853 - 45593789
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||| |||| || ||||||| |||||||| ||||||||| |||||||| ||||||||||||||    
T  45593853 tgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataagtt 45593789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 5006628 - 5006581
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  5006628 tattcctataacaaaagataaaataaagtcaaactgttttcatataag 5006581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 19624177 - 19624236
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||||||||| | |||  ||||||| || ||||||||||||||||||||||||||||||    
T  19624177 tatttctataagataaggcaaaataaagtaaaactattttcatataagttgttttcataa 19624236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 25600693 - 25600753
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgtttt 172  Q
    |||| ||||||||||||||||||| |||||||||  |||||| ||||| ||||||||||||||    
T  25600693 gtataagttatttctataacaaaatataaaataa--tcaaacaatttttatataagttgtttt 25600753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 35536044 - 35536107
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||| |||| || ||||||||||||| |||||||||||| |||||| | ||||||||||||||    
T  35536044 gcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagtt 35536107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 7244635 - 7244696
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||| |||| || |||||||||| |||||||||||| || |||||||| ||||||||    
T  7244635 aagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 7244687 - 7244748
Alignment:
Q  167 tgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||||||||| ||||| || || | ||||||||||||||||||| |||||||||| |||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgt 7244748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 425
Target Start/End: Original strand, 23214915 - 23214972
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatg 425  Q
    |||| ||||||||||||||||  |||| |||||||||||| |||||| ||||||||||    
T  23214915 tggaaatgtcataagttgttttcataaattctctcaaacagtctcataagtgtttatg 23214972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 28165024 - 28165089
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| |||| |||||||||||||||||||||| | |||||| | |||| |||||||    
T  28165024 aagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataag 28165089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 30456569 - 30456520
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||||| ||||||||||||||||| |||||| | ||||||||||||||    
T  30456569 tatttctaaaacaaaagataaaataaagtcaaattgttttcatataagtt 30456520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 1418381 - 1418433
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactattttcatataagttgt 169  Q
    ||||||||||||||||||||| ||||| |||||  | ||||||||||||||||    
T  1418381 ttatttctataacaaaagatataataaagtcaatatgttttcatataagttgt 1418433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 2727479 - 2727435
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatat 162  Q
    |||||||||||||||||||||||||| | |||||| |||||||||    
T  2727479 tatttctataacaaaagataaaataaaggcaaactcttttcatat 2727435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 7243595 - 7243659
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    ||||| |||||||||||||||||||| |||||||  |||| ||||||||||  ||||||| ||||    
T  7243595 tatttttataacaaaagataaaataacgtcaaacagtttttatataagttggcttcataaactat 7243659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 439
Target Start/End: Complemental strand, 22387903 - 22387835
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagtt 439  Q
    ||||| ||||||||||||  ||||| |||| |||||| |||||   |||||||||||||||||||||||    
T  22387903 acatgccataagttgttttcataagctctcccaaacagtctcacacgtgtttatgtcagtaaataagtt 22387835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 31341130 - 31341194
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||| |||| || ||||| |||||||||||||||||||| ||||||||  ||| |||||||||    
T  31341130 tgcttatgtataagctatttgtataacaaaagataaaataaagtcaaactggttttatataagtt 31341194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 36598363 - 36598303
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagta 431  Q
    |||||||||||| |||||| ||||| |||||||||||||||||  | || |||||||||||    
T  36598363 acatgtcataagatgtttccataagctctctcaaacaatctcacaattgcttatgtcagta 36598303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 39360008 - 39360084
Alignment:
Q  145 gtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 221  Q
    |||||||| |||||||||||| |||||||| || |||| |||  | | ||||  |||||||||||||||||||||||    
T  39360008 gtcaaactgttttcatataagatgttttcaaaagctatcctggcgagcttattgaaataagctgaaagcaacttatg 39360084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 46104637 - 46104589
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctg 208  Q
    |||||||||||||||||| |||| |||||| | ||||||||||||||||    
T  46104637 tataagttgttttcataagctatgctgaagagcttatgaaaataagctg 46104589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 47004038 - 47004082
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatat 162  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||    
T  47004038 tatttctataacaatagataaaataaagtcaaactatttttatat 47004082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 1417215 - 1417262
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||| |||||||||||||||||||| |||||| | ||||||||||||    
T  1417215 tatttatataacaaaagataaaataaagtcaaattgttttcatataag 1417262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 261
Target Start/End: Original strand, 4966104 - 4966257
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatat-------aagttgttttcataacctatactgaagtgtttatgaaaataagct 207  Q
    ||||||||| | |||||| ||||||||||| ||||||  |||||||||       ||| ||||||||||| | || |||||| | ||||| |||||| ||    
T  4966104 agttatttccacaacaaaggataaaataatatcaaacagttttcatattaggtataagctgttttcataagccatcctgaagagcttatggaaataaact 4966203  T
Q  208 gaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaacagt 261  Q
    |||| ||||||||| |||| | |||   |||||| | |||||||| ||||||||    
T  4966204 gaaaacaacttatggacatatcataagtggtttctataagctctcctaaacagt 4966257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 5373158 - 5373225
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||| ||||  | |||||||||||||||||||||||||| ||| ||  ||||| |||||||||    
T  5373158 aagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagtt 5373225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 31002688 - 31002759
Alignment:
Q  94 ttaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||| ||||||||| |||| |  |||||| |  |||||||||||||||| |||||| ||||||||||||||    
T  31002688 ttaattaagtgcttatgtataaactatttcaaccacaaaagataaaataaagtcaaaatattttcatataag 31002759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 40689105 - 40689058
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||| ||||||||||||||| || ||| ||||||||||||||    
T  40689105 tatttctatagcaaaagataaaataaagttaaattattttcatataag 40689058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 43318647 - 43318588
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||||||||||||| |||||||||| |||||| | || ||||||||| || ||||||||    
T  43318647 tatttctataacaaatgataaaataaagtcaaattgttatcatataagctgatttcataa 43318588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 49060491 - 49060538
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||| ||||||||| |||||| |||||| |||||||    
T  49060491 tatttctataacaaaaaataaaataaagtcaaattatttttatataag 49060538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 1432099 - 1432061
Alignment:
Q  105 cttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  1432099 cttatgtataagttatttctataacaaaagataaaataa 1432061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 5715157 - 5715111
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||||| ||||||||||||| ||||||| |||||| |||||    
T  5715157 tatttctataacgaaagataaaataaagtcaaacaattttcttataa 5715111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 9527205 - 9527163
Alignment:
Q  122 tctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||||||||| ||||| |||||||| |||||||||||    
T  9527205 tctataacaaaagatataataaagtcaaactgttttcatataa 9527163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 23918905 - 23918955
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| ||||| |||||||||||||||| |||||| | ||||||||||||    
T  23918905 agttatctctattacaaaagataaaataaagtcaaattgttttcatataag 23918955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 35007633 - 35007667
Alignment:
Q  196 tgaaaataagctgaaagcaacttatgaacatgtaa 230  Q
    |||||||||||||||| ||||||||||||||||||    
T  35007633 tgaaaataagctgaaaacaacttatgaacatgtaa 35007667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 2999142 - 2999175
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaac 151  Q
    |||||||||||||||||||||||||| |||||||    
T  2999142 tatttctataacaaaagataaaataaagtcaaac 2999175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 8680935 - 8680992
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||| |||||||| | |||||||||||| ||||| |||||| |||||||||| |||||    
T  8680935 gtataagttatttttgtaacaaaagatataataaagtcaaattattttcatacaagtt 8680992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 413
Target Start/End: Complemental strand, 27626133 - 27626088
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    ||||||||||||||| |||||| ||||| | |||||||||||||||    
T  27626133 tggacatgtcataagctgtttccataagctttctcaaacaatctca 27626088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 35809041 - 35808988
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaacta 153  Q
    ||||| ||| |||| || |||||||||||||||||||||||||  |||||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaaacta 35808988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 38496652 - 38496589
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||||| ||| |||||||| |||||||||| |||||||||  ||||||| |||||||||||    
T  38496652 caagtgcttacatataagttattt-tataacaaaacataaaataa-atcaaactgttttcatataa 38496589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 211
Target Start/End: Original strand, 39505958 - 39506007
Alignment:
Q  162 taagttgttttcataacctatactgaagtgtttatgaaaataagctgaaa 211  Q
    |||||||||||||||| |||| ||| || ||||||| |||||||||||||    
T  39505958 taagttgttttcataagctattctggagagtttatggaaataagctgaaa 39506007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 47046229 - 47046180
Alignment:
Q  116 gttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||| |||||| |||||||||| |||||| | ||||||||||||    
T  47046229 gttatttctacaacaaaggataaaataaagtcaaattgttttcatataag 47046180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 1373662 - 1373614
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    |||||||| ||| |||||||||||| ||| |||||||| ||||||||||    
T  1373662 agttatttttatgacaaaagataaattaaagtcaaacttttttcatata 1373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 6824953 - 6824985
Alignment:
Q  193 ttatgaaaataagctgaaagcaacttatgaaca 225  Q
    |||||||||||||||||||| ||||||||||||    
T  6824953 ttatgaaaataagctgaaaggaacttatgaaca 6824985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 12835056 - 12835012
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatat 162  Q
    |||||||| ||||||||||||||||| |||||| | |||||||||    
T  12835056 tatttctacaacaaaagataaaataaagtcaaattgttttcatat 12835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 17989136 - 17989096
Alignment:
Q  124 tataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||| ||||||||| |||||||| |||||||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataa 17989096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 27121718 - 27121658
Alignment:
Q  105 cttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||| || ||||||||||| ||| |||||||||| |||||| | ||||||||||||    
T  27121718 cttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataag 27121658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 27492746 - 27492794
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagt 166  Q
    ||||||||||||||||| | ||||||  ||||||| |||||||||||||    
T  27492746 tatttctataacaaaagttcaaataaaatcaaacttttttcatataagt 27492794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 30535501 - 30535537
Alignment:
Q  105 cttacgtatgagttatttctataacaaaagataaaat 141  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  30535501 cttacgtataagttacttctataacaaaagataaaat 30535537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 40687646 - 40687606
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttc 158  Q
    ||||||||||||||||| ||||||||||| || ||||||||    
T  40687646 tatttctataacaaaagttaaaataatgttaatctattttc 40687606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 41040117 - 41040165
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||| ||||||||||||||||  |||| |||| ||||||||    
T  41040117 ttatttctataataaaagataaaataatgaaaaacaatttccatataag 41040165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 42656466 - 42656498
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaa 150  Q
    |||||||||||||||||||||||||| ||||||    
T  42656466 tatttctataacaaaagataaaataaagtcaaa 42656498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 44151550 - 44151482
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||||||||||||||| ||||  ||||  | ||||| ||||||||||||| || |||||| ||||||    
T  44151550 tataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgt 44151482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 45777284 - 45777244
Alignment:
Q  124 tataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataa 45777244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 46825052 - 46825096
Alignment:
Q  121 ttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| |||||||||||||| |||||| | ||||||||||||    
T  46825052 ttctataaaaaaagataaaataaagtcaaattgttttcatataag 46825096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 47427308 - 47427268
Alignment:
Q  373 atgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    ||||||||||||||||| ||||| |||||||||| ||||||    
T  47427308 atgtcataagttgtttccataagctctctcaaaccatctca 47427268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 37063193 - 37063143
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttg 168  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37063193 tatttctataacaaaagataaaataaagtcaaactattttcatataagttg 37063143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 3237051 - 3237156
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaact 217  Q
    ||||||||| |||||||| ||||||   |||||| ||||||||||||| ||||||||||| |||| || ||| | ||||||||||| ||||||  |||||    
T  3237051 tatttctattacaaaagacaaaatagaatcaaaccattttcatataagctgttttcataagctatcctaaagagcttatgaaaatatgctgaacacaact 3237150  T
Q  218 tatgaa 223  Q
    ||||||    
T  3237151 tatgaa 3237156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 35135799 - 35135734
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||| ||| |||| || |||||||||||||||||||||||||| |||||||||||||||||||||    
T  35135799 aagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataag 35135734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 7096265 - 7096203
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    |||||||||| |||| || |||||||||||||||||||||||||| ||||||| |||||||||    
T  7096265 caagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 437
Target Start/End: Complemental strand, 11095505 - 11095436
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataag 437  Q
    ||||||||||||||| |||||| | ||||||||||||||||| |||  |||||||||||||||| |||||    
T  11095505 tggacatgtcataagctgtttccacaagttctctcaaacaatatcacaagtgtttatgtcagtagataag 11095436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 11615459 - 11615568
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaact 217  Q
    ||||| |||||||||||||||||||| |||||| | ||| | |||||| |||||||||||  ||| || | | | ||||| ||||||||||||| || ||    
T  11615459 tatttttataacaaaagataaaataaagtcaaattgtttacgtataagctgttttcataagatatccttatgagcttatggaaataagctgaaaacagct 11615558  T
Q  218 tatgaacatg 227  Q
    ||||||||||    
T  11615559 tatgaacatg 11615568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 14295457 - 14295504
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  14295457 tatttctataacaaaagataaaataaagtcaaactgttttcatataag 14295504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 17258952 - 17258885
Alignment:
Q  161 ataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||| ||||||||||| |||| |||||| | ||||||||||||||||||| || |||||||||||||    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgt 17258885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 38766968 - 38766913
Alignment:
Q  112 atgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||    
T  38766968 atgagttatttctataacaaaagctaaaataaagttaaactattttcatctaagtt 38766913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 28586885 - 28586839
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||    
T  28586885 tatttctataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 20982272 - 20982195
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||||||| |||| || ||||||||||||||| |||||||||| ||||| |  ||||||||||| |||||| |||||    
T  20982272 aagtgcttatgtataagctatttctataacaaaggataaaataaagtcaacccgttttcatataaattgtttacataa 20982195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 29117051 - 29117002
Alignment:
Q  116 gttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  29117051 gttatttctataacaaaagataaaataaagtcaaactgttttcgtataag 29117002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 39750102 - 39750143
Alignment:
Q  126 taacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  39750102 taacaaaagataaaataaagtcaaactattttcatataagtt 39750143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 32197700 - 32197780
Alignment:
Q  140 ataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttat 220  Q
    |||| ||||||||||||||||||||| ||||| ||||| |||| ||||||   ||||||||||||| ||||| || |||||    
T  32197700 ataaagtcaaactattttcatataagctgtttccataagctatcctgaagaacttatgaaaataagatgaaaacagcttat 32197780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 39823241 - 39823193
Alignment:
Q  117 ttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  39823241 ttatttatataacaaaagataaaataaagtcaaactactttcatataag 39823193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 182
Target Start/End: Original strand, 13224362 - 13224442
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    ||||||||| |||| || ||||||||||||||||||||||||||  || |||| ||||  | |||||||||||||||| ||||    
T  13224362 aagtgcttatgtataagctatttctataacaaaagataaaataaaatccaactctttt--tgtaagttgttttcataagctat 13224442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 27106060 - 27106017
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||||||||||||| ||| |||||||||||||||||||||||||    
T  27106060 aagtgcttacgtataagtcatttctataacaaaagataaaataa 27106017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 1084227 - 1084125
Alignment:
Q  124 tataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaa 223  Q
    |||| |||||| |||||||| |||||| | |||| | ||||| |||||||||||| |||  ||||| | ||||| ||||||||| ||| ||||| |||||    
T  1084227 tatagcaaaaggtaaaataacgtcaaattgttttaaaataagctgttttcataacatatcatgaagagcttatggaaataagctaaaaacaactcatgaa 1084128  T
Q  224 cat 226  Q
    |||    
T  1084127 cat 1084125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 2880617 - 2880551
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacat 226  Q
    ||||||||||||| |||| |||| | |||| ||||||| ||||||||||||| || |||||||||||    
T  2880617 tataagttgtttttataagctattcagaagagtttatggaaataagctgaaaacaccttatgaacat 2880551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 15074869 - 15074751
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcat-----ataagttgttttcataacctatactgaagtgtttatgaaaataagctga 209  Q
    |||||||||||||| |||||||| ||||   ||||||| |||||||     |||||||||||||||||  ||||||| |  | ||||| |||||||||||    
T  15074869 agttatttctataataaaagatagaatataatcaaactgttttcatgagctataagttgttttcataagttatactggaaagcttatggaaataagctga 15074770  T
Q  210 aagcaacttatgaacatgt 228  Q
    || || |||||| ||||||    
T  15074769 aaacagcttatggacatgt 15074751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 32969239 - 32969189
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||||||||||||||||||||||| |||||| |||||| |||||||    
T  32969239 agttgtttctataacaaaagataaaataaagtcaaattatttttatataag 32969189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 40097160 - 40097202
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  40097160 tatttctatcacaaaagataaaataatgtcaaattattttcat 40097202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 985582 - 985631
Alignment:
Q  116 gttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| ||||||||||||||||||| |||||||| |||||| |||||    
T  985582 gttatttccataacaaaagataaaataaagtcaaactgttttcacataag 985631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 439
Target Start/End: Complemental strand, 14599372 - 14599311
Alignment:
Q  378 ataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagtt 439  Q
    |||||||||||| ||||| ||||||||||||||| |  ||||||||||  ||||||||||||    
T  14599372 ataagttgtttcgataagctctctcaaacaatcttacaagtgtttatgctagtaaataagtt 14599311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 18704172 - 18704108
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||| |||| |||| |||||||||||||||||||||| |||||| ||||| ||||||| |||||||    
T  18704172 aagttcttatgtataagttatttctataacaaaagat-aaataaagtcaagctatttttatataag 18704108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 10272501 - 10272442
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaactta 219  Q
    |||||||||||||||||| | ||  || || ||||||||||||||||||||| |||||||    
T  10272501 tataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaactta 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 10391286 - 10391329
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||||||||||||| || ||||| ||||||||||||||||||||    
T  10391286 aagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 21782728 - 21782656
Alignment:
Q  74 tgtttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaa 150  Q
    ||||||||||||||||||||||||    ||| ||| || | || ||||||||||||||||| |||||||| ||||||    
T  21782728 tgtttggataaacaacttaattaa----gtgtttatgtttaagctatttctataacaaaagctaaaataaagtcaaa 21782656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 40048417 - 40048374
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||    
T  40048417 aagtgcttatgtataagttgtttctataacaaaagataaaataa 40048374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 9703362 - 9703312
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||| |||||| ||||||||||| ||||||||  |||||||||||    
T  9703362 agttatttctgtaacaagagataaaataaagtcaaactcatttcatataag 9703312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 437
Target Start/End: Complemental strand, 10125725 - 10125659
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataag 437  Q
    ||||||||||||||||||  ||||||||||||| ||||| |||  |||| | ||||||||| |||||    
T  10125725 acatgtcataagttgtttacataagttctctcagacaatgtcacaagtgctcatgtcagtagataag 10125659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 10303752 - 10303794
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    |||||||||||||||||||||||||| |||||| | |||||||    
T  10303752 tatttctataacaaaagataaaataaagtcaaattgttttcat 10303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 10537797 - 10537751
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||||||||||||||| | ||||||||| || ||||||||||||||    
T  10537797 agttatttctataacaagatataaaataaagttaaactattttcata 10537751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 11040996 - 11041034
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactatttt 157  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  11040996 atttctataacaaacgataaaataaagtcaaactatttt 11041034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 17756866 - 17756816
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaa 150  Q
    ||||||||| ||||||||| ||||| ||||| |||||||||||| ||||||    
T  17756866 aagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaa 17756816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 26516354 - 26516400
Alignment:
Q  121 ttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||| |||||| ||||||||||| ||||||||| |||||||||||||    
T  26516354 ttctctaacaatagataaaataaagtcaaactactttcatataagtt 26516400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 143
Target Start/End: Complemental strand, 34117669 - 34117627
Alignment:
Q  101 agtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||||||| |||| |||||||||| ||||||||||||||||||    
T  34117669 agtgcttatgtataagttatttctttaacaaaagataaaataa 34117627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 35960365 - 35960403
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattt 156  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  35960365 tatttctataataaaagataaaataaagtcaaactattt 35960403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 412
Target Start/End: Original strand, 40864717 - 40864751
Alignment:
Q  378 ataagttgtttcaataagttctctcaaacaatctc 412  Q
    |||||||||||||||||||||||||||||| ||||    
T  40864717 ataagttgtttcaataagttctctcaaacagtctc 40864751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 583886 - 583845
Alignment:
Q  124 tataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||| |||||||||||| |||||||| ||||||||||||    
T  583886 tataacagaagataaaataaagtcaaactgttttcatataag 583845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 12407780 - 12407731
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||||||||||||||||||||||| || || || ||||||| ||||||    
T  12407780 tatttctataacaaaagataaaataaagtaaatctgttttcatgtaagtt 12407731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 18543267 - 18543199
Alignment:
Q  159 atataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||||||||||||||||| |||| ||| || | ||||| ||||||||||||| ||||| ||| ||||||    
T  18543267 atataagttgttttcataagctatcctggagagcttatg-aaataagctgaaaacaactcatggacatgt 18543199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 25461379 - 25461318
Alignment:
Q  167 tgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||||||||||||||  ||  || |||||||||||||||||||| || || ||||||||||    
T  25461379 tgttttcataacctatcttggcgtatttatgaaaataagctgaaaacagctaatgaacatgt 25461318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 29588813 - 29588858
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatg 145  Q
    ||||||||| |||| || |||||||||||||||| |||||||||||    
T  29588813 aagtgcttatgtataagctatttctataacaaaatataaaataatg 29588858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 413
Target Start/End: Original strand, 32172713 - 32172758
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    |||||||||||||||||||||| ||||| |||| ||||| ||||||    
T  32172713 tggacatgtcataagttgtttccataagctctcccaaactatctca 32172758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 34690825 - 34690870
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatata 163  Q
    |||||||||||||||||||||||||| |||| | || |||||||||    
T  34690825 tatttctataacaaaagataaaataaagtcacaatactttcatata 34690870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 37968828 - 37968885
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcata 161  Q
    ||||| |||| || |||||||||||||||||||||||| | |||||| | ||||||||    
T  37968828 gcttaggtataagctatttctataacaaaagataaaatgaggtcaaagtgttttcata 37968885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 38047966 - 38047929
Alignment:
Q  126 taacaaaagataaaataatgtcaaactattttcatata 163  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  38047966 taacaaaagataaaataaagtcaaattattttcatata 38047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 5952038 - 5951978
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttat 220  Q
    |||| |||||||||||||  |||||||||  | ||||| ||||||||||||| ||||||||    
T  5952038 tatatgttgttttcataaattatactgaatagcttatggaaataagctgaaaacaacttat 5951978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 10771964 - 10771908
Alignment:
Q  154 ttttcatataagttgttttcataacctatactgaagtgtttatgaaaataagctgaa 210  Q
    ||||||||||||||| |||||||| |||| |   || ||||||||||||||||||||    
T  10771964 ttttcatataagttgctttcataagctatccgagagagtttatgaaaataagctgaa 10771908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 11684356 - 11684465
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaa 199  Q
    ||||||| | |||| || ||||| |||||||||| |||||||| ||  ||||| |||||||||||| | ||||||||| |||| ||| || | ||| | |    
T  11684356 aagtgctaatgtataagctatttttataacaaaatataaaatagtg--aaactgttttcatataagctattttcataagctatgctggagagcttacgga 11684453  T
Q  200 aataagctgaaa 211  Q
    |||||| |||||    
T  11684454 aataagttgaaa 11684465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 11707055 - 11707123
Alignment:
Q  160 tataagttgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||| ||||||||||| ||||  || || | || |||||||||||||||| |||||||| |||||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgt 11707123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 12595857 - 12595813
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||||||||||||||||||||| || ||| | |||||||||||    
T  12595857 tttctataacaaaagataaaataaagttaaattgttttcatataa 12595813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 14599424 - 14599373
Alignment:
Q  118 tatttctataacaaaa--gataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||||||  |||||||| | |||||||| ||||||||||||||    
T  14599424 tatttctataacaaaactgataaaattaagtcaaactgttttcatataagtt 14599373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 419
Target Start/End: Original strand, 18875439 - 18875475
Alignment:
Q  383 ttgtttcaataagttctctcaaacaatctcattagtg 419  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  18875439 ttgtttcaataagttctctcaaacattctcataagtg 18875475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 448
Target Start/End: Original strand, 29363072 - 29363147
Alignment:
Q  372 catgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatgtcagtaaataagttaatccaaac 448  Q
    |||||||||||||||||  ||||| |||| | |||| |||||| |||||||||  |||||||||| | |||||||||    
T  29363072 catgtcataagttgttttcataagctctc-ccaacattctcatgagtgtttatcccagtaaataaatgaatccaaac 29363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 33459069 - 33459029
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||||| |||| ||||||||||||||||||||| |||||||    
T  33459069 tgcttatgtataagttatttctataacaaaagacaaaataa 33459029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 35095902 - 35095870
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaa 150  Q
    |||||||||||||||||||||||||| ||||||    
T  35095902 tatttctataacaaaagataaaataaagtcaaa 35095870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 37386566 - 37386614
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagt 166  Q
    ||||||||||| |||||| ||| ||| | ||||||||||||||||||||    
T  37386566 tatttctataataaaagaaaaattaaaggcaaactattttcatataagt 37386614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 39128574 - 39128622
Alignment:
Q  102 gtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaa 150  Q
    ||||||| |||| || || ||||||||||||||||||||||| ||||||    
T  39128574 gtgcttatgtataagctaattctataacaaaagataaaataaagtcaaa 39128622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 41277456 - 41277420
Alignment:
Q  131 aaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagtt 41277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 1211 - 1146
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| || |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  1211 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataag 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 2764 - 2829
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| || |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  2764 aagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataag 2829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 5328907 - 5329039
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttca------tataagttgttttcataacctatactgaagtgtt 193  Q
    |||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||| |      |||||| ||||||| |||  |||  || || |||    
T  5328907 aagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataattataagctgttttcgtaagttatcatggagagtt 5329006  T
Q  194 tatgaaaataagctgaaagcaacttatgaacat 226  Q
    |||||||||||| |||||||| |||||| ||||    
T  5329007 tatgaaaataagatgaaagcagcttatggacat 5329039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 33068695 - 33068633
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| |||| |||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  33068695 tgcttatgtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataag 33068633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 10452496 - 10452432
Alignment:
Q  101 agtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| |||| || |||||||||||||||| |||||||||  ||||||||||||||||||||    
T  10452496 agtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataag 10452432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 27889979 - 27889916
Alignment:
Q  101 agtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| |||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  27889979 agtgcttatgtacaagttatttctataacaacagataaaataat-tcaaactattttcatataag 27889916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 1402947 - 1402994
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  1402947 tatttctataacaaaagataaaataaagttaaactattttcatataag 1402994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 2027525 - 2027479
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  2027525 tatttttataacaaaagataaaataaagtcaaactattttcatataa 2027479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 32386236 - 32386108
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctatactgaagtgtttatgaa 199  Q
    ||||||||| |||| || ||||||  | | |||||||||||||| || ||||| |||| ||||||| ||||||||| |  ||| ||| |  | |||||||    
T  32386236 aagtgcttatgtataagctatttcacttagaaaagataaaataaagtaaaactgtttttatataagctgttttcattagttatcctggaaagcttatgaa 32386137  T
Q  200 aataagctgaaagcaacttatgaacatgt 228  Q
    | |||||||||| ||||||||| ||||||    
T  32386136 agtaagctgaaaacaacttatggacatgt 32386108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 7354155 - 7354202
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||    
T  7354155 tatttctataacaaaagataaaataaaatcgaactattttcatataag 7354202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 2514635 - 2514697
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatat 162  Q
    ||||||||| |||| || ||||||||||| |||||||||||||| ||||||||| ||| ||||    
T  2514635 aagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatat 2514697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 24836326 - 24836272
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||| ||||||||||||||||||||||||||||| |||||| | ||||| |||||    
T  24836326 gtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 29274363 - 29274301
Alignment:
Q  103 tgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||| |||| || |||||||||| ||||||||||||||| |||||| | ||||||||||||    
T  29274363 tgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataag 29274301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 30865425 - 30865467
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaact 152  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  30865425 gtatgagctatttctataacaaaagataaaataaagtcaaact 30865467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 32513773 - 32513822
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  32513773 agttatttctataacaaaa-ataaaataaagtcaaactatttccatataag 32513822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 4325445 - 4325380
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| || | |||||||||||||| ||| |||||||||  | |||||||||||||||||||    
T  4325445 aagtgcttatgtctaagttatttctataataaatgataaaatagagacaaactattttcatataag 4325380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 7785875 - 7785814
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| | ||||| || |||| ||||||||||||||| |||||||| ||||||||||||    
T  7785875 gcttacgtgtaagttacttatataccaaaagataaaataaagtcaaactcttttcatataag 7785814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 27595684 - 27595639
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  27595684 tttctataataaaagataaaataaagtcaaattattttcatataag 27595639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 8349783 - 8349719
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagttgttttcataacctat 182  Q
    ||||||| |||||||||||||||||| || ||| | |||| |||||||||| |||||||| ||||    
T  8349783 tatttctctaacaaaagataaaataaagttaaattgtttttatataagttgctttcataagctat 8349719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 410
Target Start/End: Original strand, 24670482 - 24670522
Alignment:
Q  370 gacatgtcataagttgtttcaataagttctctcaaacaatc 410  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  24670482 gacatgtcataagttgtttctataagttctctaaaacaatc 24670522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 30784510 - 30784550
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcat 160  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  30784510 tttctataacaaaagataaaataaagtcaaactactttcat 30784550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 32917257 - 32917313
Alignment:
Q  368 tggacatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttat 424  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||  |||||||||    
T  32917257 tggacatgtcataagttgtttccataagctctcccaaacagtctcacaagtgtttat 32917313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 34404317 - 34404382
Alignment:
Q  72 cttgtttggataaacaacttaattaatcaagtgcttacgtatgagttatttctataacaaaagataaaat 141  Q
    ||||||||||||||||||||||||    ||||||||| |||||| |||||||||||| |  |||||||||    
T  34404317 cttgtttggataaacaacttaatt----aagtgcttatgtatgacttatttctataagacgagataaaat 34404382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 413
Target Start/End: Complemental strand, 2460159 - 2460116
Alignment:
Q  370 gacatgtcataagttgtttcaataagttctctcaaacaatctca 413  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||    
T  2460159 gacatgtcataagttgtttccataagctctctcaaacagtctca 2460116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 226
Target Start/End: Original strand, 4006647 - 4006780
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttca-------tataagttgttttcataacctatactgaagtgt 192  Q
    ||||||||| | || || ||||||||||||||| |||||||||| |||||| | |||| |       |||||||||||||||||| |||| |   || |     
T  4006647 aagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagagg 4006746  T
Q  193 ttatgaaaataagctgaaagcaacttatgaacat 226  Q
    |||||||||||||||||||  |||||||| ||||    
T  4006747 ttatgaaaataagctgaaaataacttatggacat 4006780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 10154174 - 10154221
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||  |||||||||||||| |||||||| ||||||||||||||    
T  10154174 tttctatagaaaaagataaaataaagtcaaactgttttcatataagtt 10154221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 10749347 - 10749300
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||| |||||||||||||| || ||| ||||||||||||||    
T  10749347 tatttctataataaaagataaaataaagttaaattattttcatataag 10749300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 507154 - 507196
Alignment:
Q  101 agtgcttacgtatgagttatttctataacaaaagataaaataa 143  Q
    |||||||| |||| | |||||||||||||||||||||||||||    
T  507154 agtgcttatgtataaattatttctataacaaaagataaaataa 507196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 2034545 - 2034499
Alignment:
Q  131 aaagataaaataatgtcaaactattttcatataagttgttttcataa 177  Q
    ||||||||||||| ||||||||| ||||||||||| | |||||||||    
T  2034545 aaagataaaataaagtcaaactactttcatataagcttttttcataa 2034499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 2117354 - 2117400
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  2117354 tatttctatgacaaaggataaaacaaagtcaaactattttcatataa 2117400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 4247771 - 4247706
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagt 166  Q
    ||||||||| |||| || ||||||||||||||||||||||| ||| ||||||| || ||||| ||||    
T  4247771 aagtgcttatgtataagctatttctataacaaaagataaaaaaat-tcaaactgttgtcataaaagt 4247706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 10031692 - 10031730
Alignment:
Q  101 agtgcttacgtatgagttatttctataacaaaagataaa 139  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  10031692 agtgcttacgtataagttatttctataacaaaaaataaa 10031730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 27595574 - 27595520
Alignment:
Q  371 acatgtcataagttgtttcaataagttctctcaaacaatctcattagtgtttatg 425  Q
    ||||||||||||||||||| |||| ||||| |||||| |||||| |||| |||||    
T  27595574 acatgtcataagttgtttccataaattctcccaaacagtctcataagtgcttatg 27595520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 29940728 - 29940778
Alignment:
Q  99 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaa 149  Q
    |||||||||| |||| || | |||||||||||||||||||||||| |||||    
T  29940728 caagtgcttaagtataagctttttctataacaaaagataaaataaagtcaa 29940778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 323762 - 323811
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||||||  ||||||||||||||  ||||||| ||||||||||||||    
T  323762 tatttctatattaaaagataaaataaattcaaactgttttcatataagtt 323811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 3204679 - 3204614
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||| || |  || |||||||| |||||||||||||| ||| |||| ||||||||||||    
T  3204679 aagtgcttacgaataaactacttctataataaaagataaaataaagtcgaactgttttcatataag 3204614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 3217327 - 3217262
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| |||| || ||||| | ||| | |||||||||||| |||||| ||||||||||||||    
T  3217327 aagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataag 3217262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 21959661 - 21959710
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaa 149  Q
    ||||||||| |||| || |||||| ||||||||||||||||||| |||||    
T  21959661 aagtgcttaagtataagctatttccataacaaaagataaaataaagtcaa 21959710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 24782010 - 24782059
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    |||||||||||||||||||||||| |  ||||| | ||||||||||||||    
T  24782010 tatttctataacaaaagataaaatcaaatcaaattgttttcatataagtt 24782059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 27693556 - 27693511
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| | |||||||||||| |||||| ||||||||||||||    
T  27693556 tttctataatagaagataaaataaagtcaaattattttcatataag 27693511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 27998479 - 27998426
Alignment:
Q  167 tgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttat 220  Q
    |||||| |||||||||| ||||| ||||||  ||||||||||||| ||||||||    
T  27998479 tgttttaataacctataatgaagagtttatagaaataagctgaaaacaacttat 27998426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 31672013 - 31672046
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataa 143  Q
    |||| |||||||||||||||||||||||||||||    
T  31672013 gtataagttatttctataacaaaagataaaataa 31672046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 33887837 - 33887898
Alignment:
Q  167 tgttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    ||||||||||| |||| ||||| || ||||| ||||||| ||||| |||||| |||||||||    
T  33887837 tgttttcataagctatcctgaaatgcttatggaaataagttgaaaacaacttgtgaacatgt 33887898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 34939755 - 34939848
Alignment:
Q  171 ttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgtaatacacggtttccagaagctctcttaaacagtttc 264  Q
    ||||||| |||| ||| || ||||||| ||||||||||||| ||| ||||| |||||| |||  | ||||||  ||||||||  ||||||||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctccaaaacagtttc 34939848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 6536971 - 6537015
Alignment:
Q  184 ctgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||||| | ||||| ||||||||||||| ||||||||||||||||    
T  6536971 ctgaagagcttatggaaataagctgaaaacaacttatgaacatgt 6537015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 7713983 - 7714023
Alignment:
Q  125 ataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||||||||||||| |||||| | ||||||||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcatataag 7714023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 28531668 - 28531628
Alignment:
Q  110 gtatgagttatttctataacaaaagataaaataatgtcaaa 150  Q
    |||| |||||||| |||||||||||||||||||| ||||||    
T  28531668 gtataagttatttatataacaaaagataaaataaagtcaaa 28531628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 31461611 - 31461651
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaa 140  Q
    ||||||||| |||| || |||||||||||||||||||||||    
T  31461611 aagtgcttatgtataagctatttctataacaaaagataaaa 31461651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 409
Target Start/End: Complemental strand, 32577995 - 32577955
Alignment:
Q  369 ggacatgtcataagttgtttcaataagttctctcaaacaat 409  Q
    ||||||||||||||||||||  ||||| |||||||||||||    
T  32577995 ggacatgtcataagttgttttcataagctctctcaaacaat 32577955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 32843452 - 32843392
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagat-aaaataatgtcaaactattttca 159  Q
    ||||||||| |||| |||||||||||||| || |||| ||||||||||||| || ||||||    
T  32843452 aagtgcttatgtataagttatttctataataagagataaaaataatgtcaatctgttttca 32843392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 369 - 409
Target Start/End: Original strand, 34939574 - 34939614
Alignment:
Q  369 ggacatgtcataagttgtttcaataagttctctcaaacaat 409  Q
    |||| |||||||||||||||| ||||| |||||||||||||    
T  34939574 ggacgtgtcataagttgtttccataagctctctcaaacaat 34939614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 27509 - 27573
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    ||||||||| |||| |||||||||||||||| |||||||||||| |||||| | |||||||||||    
T  27509 aagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataa 27573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 9910 - 9845
Alignment:
Q  102 gtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 167  Q
    ||||||| |||| ||||||||||||||||||| ||||||| | ||||||   ||||||||||||||    
T  9910 gtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataagtt 9845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 20228 - 20292
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 164  Q
    |||||| || |||| |||||||||| ||| |||| |||||||||||||||| | |||||||||||    
T  20228 aagtgcgtatgtataagttatttctttaataaaacataaaataatgtcaaattgttttcatataa 20292  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 10703 - 10619
Alignment:
Q  148 aaactattttcatataagttgttttcataacct---atact-gaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 228  Q
    |||| ||||||||||||||||| ||||||| ||   | ||| | |||||||||| ||||||||||||| ||||||||| ||||||    
T  10703 aaacaattttcatataagttgtattcataatcttgtagacttgtagtgtttatggaaataagctgaaaacaacttatggacatgt 10619  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 42550 - 42592
Alignment:
Q  100 aagtgcttacgtatgagttatttctataacaaaagataaaata 142  Q
    ||||||||| |||| ||| ||||||||||||||||||||||||    
T  42550 aagtgcttatgtataagtcatttctataacaaaagataaaata 42592  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 84251 - 84201
Alignment:
Q  115 agttatttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| ||| |||||||||||||||||| ||| | ||||||||||||    
T  84251 agttatttcaatagcaaaagataaaataatgtaaaattgttttcatataag 84201  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 152
Target Start/End: Complemental strand, 143180 - 143146
Alignment:
Q  118 tatttctataacaaaagataaaataatgtcaaact 152  Q
    ||||||||||||| |||||||||||||||||||||    
T  143180 tatttctataacacaagataaaataatgtcaaact 143146  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 104267 - 104225
Alignment:
Q  104 gcttacgtatgagttatttctataacaaaagataaaataatgt 146  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||    
T  104267 gcttatgtataagttatttctataacaaaaaataaaataatgt 104225  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 69061 - 69015
Alignment:
Q  119 atttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    ||||||||| ||||| ||||||||| |||||| ||||||||||||||    
T  69061 atttctataccaaaatataaaataaagtcaaattattttcatataag 69015  T

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Target: scaffold0153 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 6615 - 6570
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| || || ||||||||| |||||||||||||||||||||    
T  6615 tttctatagcataaaataaaataaagtcaaactattttcatataag 6570  T

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Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 13635 - 13590
Alignment:
Q  120 tttctataacaaaagataaaataatgtcaaactattttcatataag 165  Q
    |||||||| || || ||||||||| |||||||||||||||||||||    
T  13635 tttctatagcataaaataaaataaagtcaaactattttcatataag 13590  T

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