View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11103_low_5 (Length: 403)

Name: NF11103_low_5
Description: NF11103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11103_low_5
NF11103_low_5
[»] chr7 (19 HSPs)
chr7 (106-403)||(4783865-4784162)
chr7 (106-403)||(4816294-4816591)
chr7 (5-403)||(4636530-4636922)
chr7 (106-403)||(4863690-4863987)
chr7 (111-311)||(4630700-4630900)
chr7 (188-403)||(4643521-4643736)
chr7 (97-403)||(4666694-4667003)
chr7 (188-311)||(4672526-4672649)
chr7 (68-403)||(4712105-4712437)
chr7 (186-278)||(4697345-4697437)
chr7 (246-403)||(4662899-4663056)
chr7 (190-403)||(4653372-4653585)
chr7 (180-277)||(4846171-4846268)
chr7 (77-146)||(4846299-4846365)
chr7 (97-146)||(4643445-4643494)
chr7 (97-157)||(4672435-4672495)
chr7 (111-157)||(4697466-4697512)
chr7 (183-242)||(4647378-4647437)
chr7 (176-228)||(4661636-4661688)
[»] chr4 (1 HSPs)
chr4 (97-398)||(18925777-18926078)


Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 106 - 403
Target Start/End: Complemental strand, 4784162 - 4783865
Alignment:
Q  106 ttatatttatcacttattttcaaaatctcgattccattcaacgtgacatcacgatacaccgtaggcatagattttggtaatcgttgtagcttgatcgaaa 205  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  4784162 ttatttttatcacttattttcaaaatctcaattccattcaacgtgacatcacgatataccgtaggcataggttttggtaatcgttgtagcttgatcgaaa 4784063  T
Q  206 gattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcaccactccaccttatcac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4784062 gattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaaccaaaggagcaccactccaccttatcac 4783963  T
Q  306 atcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacc 403  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4783962 atcagcagcatgttcagccaaactatcatctatgaaaatctgaaaaattctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacc 4783865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 106 - 403
Target Start/End: Complemental strand, 4816591 - 4816294
Alignment:
Q  106 ttatatttatcacttattttcaaaatctcgattccattcaacgtgacatcacgatacaccgtaggcatagattttggtaatcgttgtagcttgatcgaaa 205  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| |||||||||||| ||||||||||||||||    
T  4816591 ttatttttatcacttattttcaaaatctcaattccattcaacgtgacatcacgatataccgaaggcataggttttggtaatcgatgtagcttgatcgaaa 4816492  T
Q  206 gattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcaccactccaccttatcac 305  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4816491 gattaactttttcaatttgagagcttccgccatgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcaccactccaccatatcac 4816392  T
Q  306 atcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacc 403  Q
    |||||||  | ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4816391 atcagcaaaaagttcagccaaactatcatctatgaaaatctgaaaaattctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacc 4816294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 5 - 403
Target Start/End: Original strand, 4636530 - 4636922
Alignment:
Q  5 agagagatgaaactccaactatgactatggttgacttcttggactttgattttttagatgaaagtataatgtgtttgttgggattcaaaccagcgagatt 104  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  4636530 agagagatgaaactccaactatgactacagttgacttcttggacttttgtttttgagatgatagtataatgtgtttgttgggattcaaaccagcgagatt 4636629  T
Q  105 gttatatttatcacttattttcaaaatctcgattccattcaacgtgacatcacgatacaccgtaggcatagattttggtaatcgttgtagcttgatcgaa 204  Q
    ||||||||||||||| ||||| ||||||||||||||||| |   | ||||||||||| || |||||||| | || |||||||||||| |||||||| |||    
T  4636630 gttatatttatcactaattttgaaaatctcgattccattaagaataacatcacgatatactgtaggcatgggttgtggtaatcgttgaagcttgattgaa 4636729  T
Q  205 agattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcaccactccaccttatca 304  Q
    |||| |||| |||||||||||||| ||   || |      ||||||  ||  |||||||||||||||||||||| | | ||||||||||||||| |||||    
T  4636730 agataaactctttcaatttgagagattaatccct------ccatagaaacaacataatccttatgaacaggaaccatacgagcaccactccaccctatca 4636823  T
Q  305 catcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacc 403  Q
    |||| ||    | |||| ||||| | | ||||||||| ||||||||   ||||||||| |  |  ||||||||||||||||||||||||||||||||||    
T  4636824 catccgccttttcttcaaccaaagtgttatctatgaatatctgaaagactctatcacctttatagttgatatgccaatcaaactcacaaaaatgtaacc 4636922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 106 - 403
Target Start/End: Original strand, 4863690 - 4863987
Alignment:
Q  106 ttatatttatcacttattttcaaaatctcgattccattcaacgtgacatcacgatacaccgtaggcatagattttggtaatcgttgtagcttgatcgaaa 205  Q
    |||| |||||| |||||||| ||||||||||||||||||||||| |||||||| ||    |||  ||| |  ||||||||| |||||| ||||| |||||    
T  4863690 ttatttttatcgcttattttaaaaatctcgattccattcaacgtaacatcacggtattttgtaaacatggtctttggtaattgttgtaacttgagcgaaa 4863789  T
Q  206 gattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcaccactccaccttatcac 305  Q
    | |||||| |||||||||||||||||||  ||| |||    |||| ||| | ||||||||||||||||||||| | | ||| ||| ||||||| ||||||    
T  4863790 ggttaactctttcaatttgagagcttccttcttcagagtttatagacacagtataatccttatgaacaggaaccatacgagaaccgctccaccgtatcac 4863889  T
Q  306 atcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacc 403  Q
    ||||||    |  ||||||| ||||| | ||||||||||||||||   ||||||||| |  | | | |||| |  |||||||||||||||||||||||    
T  4863890 atcagcgttttcctcagccatactattaactatgaaaatctgaaaggctctatcacctttatttgttatattcggatcaaactcacaaaaatgtaacc 4863987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 111 - 311
Target Start/End: Original strand, 4630700 - 4630900
Alignment:
Q  111 tttatcacttattttcaaaatctcgattccattcaacgtgacatcacgatacaccgtaggcatagattttggtaatcgttgtagcttgatcgaaagatta 210  Q
    ||||||||||||||| |||||||| |||||||||| |  |||||||||||| |  ||  | |||| || ||||  |||| | |||||||| |||||||||    
T  4630700 tttatcacttattttgaaaatctcaattccattcagcaggacatcacgatatattgtgtgtatagtttctggtgctcgtcgaagcttgattgaaagatta 4630799  T
Q  211 actttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcaccactccaccttatcacatcag 310  Q
    ||| |||||||||||||||||||  |||||||   ||||  |||  ||||||||||||||  |||||| | | |||||||||||||||||||||||||||    
T  4630800 actctttcaatttgagagcttccttcttgagagtacataagcacaacataatccttatgagtaggaaccatacgagcaccactccaccttatcacatcag 4630899  T
Q  311 c 311  Q
    |    
T  4630900 c 4630900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 403
Target Start/End: Original strand, 4643521 - 4643736
Alignment:
Q  188 gttgtagcttgatcgaaagattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagc 287  Q
    |||| |||||||| ||||||||| || |||||| ||||||||||||  ||||| |  |||||| ||  ||||||||||||||||||||||| ||| ||||    
T  4643521 gttgaagcttgattgaaagattagctctttcaagttgagagcttccttcttgatagtccatagacattgcataatccttatgaacaggaaccaaacgagc 4643620  T
Q  288 accactccaccttatcacatcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcctgtttgatatgccaatcaaac 387  Q
    ||||||||||| ||||||||| ||    | |||| ||||| | | ||||||||| ||||||||   ||||||||| |  | | | |||| |  |||||||    
T  4643621 accactccaccctatcacatccgccttttcttcaaccaaagtgttatctatgaatatctgaaagactctatcacctttatttgttatatccggatcaaac 4643720  T
Q  388 tcacaaaaatgtaacc 403  Q
    ||||||||||||||||    
T  4643721 tcacaaaaatgtaacc 4643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 403
Target Start/End: Original strand, 4666694 - 4667003
Alignment:
Q  97 gcgagattgttatatttatcacttattttcaaaatctcgattccattcaacgtgacatcacgatacaccgtaggcatagattttggtaatcgttgtagct 196  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||| |    ||||||||  ||    |||   | || || ||||| |||||| ||||    
T  4666694 gcgagattgttatttttgtcacttatttttaaaatctcgattccattaagaaggacatcactgtattttgtaaagacagtttctggtactcgttgaagct 4666793  T
Q  197 tgatcgaaagattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcacc---act 293  Q
    | || |||||||||||| |||||||||||  ||| || ||||||||| ||||||||| |||||||||||||||||||||||| | | || ||||   |||    
T  4666794 taattgaaagattaactctttcaatttgacggctccctccttgagaatccatagtcaaggcataatccttatgaacaggaaccatacgaacaccactact 4666893  T
Q  294 ccaccttatcacatcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcctgtttgatatgccaatcaaactcacaa 393  Q
    |||    | ||| |||||     ||||||||| | |||||||||| |||||||||||   |||||||||    |  ||||||||||||||||||||||||    
T  4666894 ccaataaagcacgtcagcccttggttcagccataatatcatctataaaaatctgaaaaactctatcacctggattcttgatatgccaatcaaactcacaa 4666993  T
Q  394 aaatgtaacc 403  Q
    ||||| ||||    
T  4666994 aaatgcaacc 4667003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 311
Target Start/End: Original strand, 4672526 - 4672649
Alignment:
Q  188 gttgtagcttgatcgaaagattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagc 287  Q
    |||| ||||| || |||||||||||| |||||||||||||||||||  |||||||   |||||| || ||||||||||||||||||||||| | | ||||    
T  4672526 gttgaagcttaatagaaagattaactctttcaatttgagagcttccttcttgagagtacatagtgacagcataatccttatgaacaggaaccatacgagc 4672625  T
Q  288 accactccaccttatcacatcagc 311  Q
    ||||||||| ||||| ||||||||    
T  4672626 accactccaacttataacatcagc 4672649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 68 - 403
Target Start/End: Complemental strand, 4712437 - 4712105
Alignment:
Q  68 gtataatgtgtttgttgggattcaaaccagcgagattgttatatttatcacttattttcaaaatctcgattccattcaacgtgacatcacgatacaccgt 167  Q
    |||||||||||||| ||||||||||||||||||||   |||| ||||||||||||||| |||||||| ||||||||||   |||||||||| ||    ||    
T  4712437 gtataatgtgtttgatgggattcaaaccagcgaga---ttatttttatcacttattttgaaaatctcaattccattcattatgacatcacggtaatttgt 4712341  T
Q  168 aggcatagattttggtaatcgttgtagcttgatcgaaagattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatcctta 267  Q
        |||  || ||||  |||||| ||||| || ||||| |||||| ||||||||| |||||||||   ||||||   |||  |||| ||||||||||||    
T  4712340 gtagatactttctggttctcgttgaagcttaattgaaaggttaactctttcaatttcagagcttccattttgagagtacattttcacagcataatcctta 4712241  T
Q  268 tgaacaggaacaaaaggagcaccactccaccttatcacatcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcct 367  Q
    ||||||||||  |    | ||||||||||    |||||||||||    |||||||||||| ||||||  || || ||||||||   ||||||||| |  |    
T  4712240 tgaacaggaatcatgttaccaccactccagtaaatcacatcagcgtattgttcagccaaaatatcattgataaatatctgaaaaactctatcacctttat 4712141  T
Q  368 gtttgatatgccaatcaaactcacaaaaatgtaacc 403  Q
      |||||| ||  |||||||||||||||||||||||    
T  4712140 tcttgataagcagatcaaactcacaaaaatgtaacc 4712105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 4697437 - 4697345
Alignment:
Q  186 tcgttgtagcttgatcgaaagattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaac 278  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||  |||||||   ||||| ||| |||||||| ||||||||||||||    
T  4697437 tcgttgtagcttgattgaaagattaagtctttcaatttgagagcttccttcttgagagtgcatagacacagcataatctttatgaacaggaac 4697345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 403
Target Start/End: Original strand, 4662899 - 4663056
Alignment:
Q  246 catagtcacggcataatccttatgaacaggaacaaaaggagcaccactccaccttatcacatcagcagcatgttcagccaaactatcatctatgaaaatc 345  Q
    |||||||||  |||||||||||||||||||||| | | || ||  |||||||||||||||||| ||    | |||| | ||| |||||||||| ||||||    
T  4662899 catagtcacaccataatccttatgaacaggaaccatacgaccattactccaccttatcacatcggctaattcttcaactaaattatcatctataaaaatc 4662998  T
Q  346 tgaaatcttctatcaccatcctgtttgatatgccaatcaaactcacaaaaatgtaacc 403  Q
    |||||  |||||||||| |  | | |||||| |  |||||||||||||||||||||||    
T  4662999 tgaaacattctatcacctttatttatgatattcggatcaaactcacaaaaatgtaacc 4663056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 403
Target Start/End: Original strand, 4653372 - 4653585
Alignment:
Q  190 tgtagcttgatcgaaagattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcac 289  Q
    ||||||||||| | |||||||||| |||||||||||| ||||||  ||| |||   |||||||||  |||||||||||||||||||||  ||| |||||     
T  4653372 tgtagcttgattgtaagattaactctttcaatttgagtgcttccttcttcagagtgcatagtcacaacataatccttatgaacaggaatcaaacgagcat 4653471  T
Q  290 cactccaccttatcacatcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcctgtttgatatgccaatcaaactc 389  Q
      |||||    ||||||||||||    ||||||||||   ||||| ||| || ||||| ||   ||||||||| |  |  |||||| |||||||||| ||    
T  4653472 tgctccatgaaatcacatcagcatttggttcagccaagaaatcatgtataaatatctggaaaactctatcacctttatccttgatacgccaatcaaattc 4653571  T
Q  390 acaaaaatgtaacc 403  Q
    ||||||||||||||    
T  4653572 acaaaaatgtaacc 4653585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 4846268 - 4846171
Alignment:
Q  180 tggtaatcgttgtagcttgatcgaaagattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaa 277  Q
    |||||||||||| |||||||| |||||||||||| ||||||||| |||||||||   ||||||    ||  |||| ||||||||||||||||||||||    
T  4846268 tggtaatcgttgaagcttgattgaaagattaactctttcaatttcagagcttccattttgagagtagattttcacagcataatccttatgaacaggaa 4846171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 4846365 - 4846299
Alignment:
Q  77 gtttgttgggattcaaaccagcgagattgttatatttatcacttattttcaaaatctcgattccattcaa 146  Q
    ||||||||||||||| |||||| ||||||||   ||||||||||| ||| ||||||||||||||||||||    
T  4846365 gtttgttgggattcataccagccagattgtt---tttatcacttactttgaaaatctcgattccattcaa 4846299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 4643445 - 4643494
Alignment:
Q  97 gcgagattgttatatttatcacttattttcaaaatctcgattccattcaa 146  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  4643445 gcgagattgttatttttgtcacttatttttaaaatctcgattccattcaa 4643494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 4672435 - 4672495
Alignment:
Q  97 gcgagattgttatatttatcacttattttcaaaatctcgattccattcaacgtgacatcac 157  Q
    |||||||| |||| ||||||||||| ||| ||||||||||||||||| || ||||||||||    
T  4672435 gcgagattattatttttatcacttactttgaaaatctcgattccatttaatgtgacatcac 4672495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 4697512 - 4697466
Alignment:
Q  111 tttatcacttattttcaaaatctcgattccattcaacgtgacatcac 157  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  4697512 tttatcatttattttcaaaatctcgatgccattcaatgtgacatcac 4697466  T

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Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 4647378 - 4647437
Alignment:
Q  183 taatcgttgtagcttgatcgaaagattaactttttcaatttgagagcttccgccttgaga 242  Q
    ||||||||| |||||||| |||||||||||| |||||||||||   ||||| ||||||||    
T  4647378 taatcgttgaagcttgattgaaagattaactctttcaatttgattccttcctccttgaga 4647437  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 4661636 - 4661688
Alignment:
Q  176 attttggtaatcgttgtagcttgatcgaaagattaactttttcaatttgagag 228  Q
    |||||| |||| |||| |||||||| ||||||| |||| ||||||||||||||    
T  4661636 attttgataatggttgaagcttgattgaaagatcaactctttcaatttgagag 4661688  T

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Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 97 - 398
Target Start/End: Complemental strand, 18926078 - 18925777
Alignment:
Q  97 gcgagattgttatatttatcacttattttcaaaatctcgattccattcaacgtgacatcacgatacaccgtaggcatagattttggtaatcgttgtagct 196  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||| ||| ||    |     |||  || ||||  |||||||||||    
T  18926078 gcgagattgttatttttgtcacttattttcaaaatctcgatcccattcaatgtgacattacggtattttgagtagatattttctggtgctcgttgtagct 18925979  T
Q  197 tgatcgaaagattaactttttcaatttgagagcttccgccttgagaacccatagtcacggcataatccttatgaacaggaacaaaaggagcaccactcca 296  Q
    | || |||||||||||| ||| |||||| ||||||||  || ||||   |||||||||  |||||||||||||||||||||| | | |||||||||||||    
T  18925978 ttattgaaagattaactcttttaatttgcgagcttccttctcgagagtacatagtcacaacataatccttatgaacaggaaccatacgagcaccactcca 18925879  T
Q  297 ccttatcacatcagcagcatgttcagccaaactatcatctatgaaaatctgaaatcttctatcaccatcctgtttgatatgccaatcaaactcacaaaaa 396  Q
        ||||||||||||    ||||||||||| |||||||||| |||||||||||   ||||||||| |  |  || ||||||||||||||||| ||||||    
T  18925878 atgaatcacatcagcatttcgttcagccaaattatcatctataaaaatctgaaaaactctatcaccttgattctttatatgccaatcaaactcgcaaaaa 18925779  T
Q  397 tg 398  Q
    ||    
T  18925778 tg 18925777  T

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