View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11105_high_22 (Length: 277)
Name: NF11105_high_22
Description: NF11105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11105_high_22 |
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Alignment Details
Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 6946223 - 6946160
Alignment:
| Q |
196 |
atttcgcagccaacatgacaaggatattgagatacaaccaagacgactcaacaatgcaattaac |
259 |
Q |
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| T |
6946223 |
atttcgcagccaacatgataaggatattgagatacaaccaagacgactcaacaatgcaattaac |
6946160 |
T |
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