View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11105_high_26 (Length: 238)
Name: NF11105_high_26
Description: NF11105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11105_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 34850132 - 34849940
Alignment:
| Q |
14 |
agatgtattatcaagatttcttgtcaaatattggatgagtattcactaaccaaatattgcaggcaaaagttataaagatgaagaggaaaggcaaagaatg |
113 |
Q |
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| T |
34850132 |
agatgtattatcaagatttcttgtcaaatattggatgagtattcactaaccaaatattgcaggcaaaagttataaagatgaagaggaaaggcaaagagtg |
34850033 |
T |
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| Q |
114 |
tctgctatttataatgtccgaaattaagttcaattcctttacgcggagaattttcatataagaaaaaagatcatattccttatcttaagatat |
206 |
Q |
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| T |
34850032 |
tctgctatttataatgtccgaaattaagttcaattcctttacgcggagaattttcatataagaaaaaagatcatattccttatcttaagatat |
34849940 |
T |
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