View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11105_low_1 (Length: 987)

Name: NF11105_low_1
Description: NF11105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11105_low_1
NF11105_low_1
[»] chr3 (69 HSPs)
chr3 (386-822)||(10658193-10658625)
chr3 (208-507)||(10594583-10594882)
chr3 (390-728)||(10513675-10514007)
chr3 (382-728)||(10510481-10510814)
chr3 (208-341)||(10513538-10513668)
chr3 (868-963)||(10658626-10658721)
chr3 (208-318)||(10510371-10510478)
chr3 (891-963)||(10514059-10514131)
chr3 (28-173)||(19625070-19625216)
chr3 (758-894)||(10377540-10377678)
chr3 (28-172)||(9491113-9491257)
chr3 (132-185)||(19646203-19646256)
chr3 (313-360)||(35492804-35492851)
chr3 (33-103)||(1661687-1661757)
chr3 (313-371)||(53681869-53681927)
chr3 (313-362)||(52119387-52119436)
chr3 (257-318)||(10658128-10658186)
chr3 (313-363)||(5702178-5702227)
chr3 (813-887)||(10440870-10440944)
chr3 (313-362)||(30200837-30200886)
chr3 (313-362)||(41990585-41990634)
chr3 (313-362)||(54230100-54230149)
chr3 (313-357)||(10926480-10926524)
chr3 (313-361)||(19939043-19939091)
chr3 (131-171)||(26832314-26832354)
chr3 (313-373)||(28148458-28148518)
chr3 (317-357)||(43630424-43630464)
chr3 (313-349)||(45254242-45254278)
chr3 (313-357)||(47377355-47377399)
chr3 (313-361)||(48688126-48688173)
chr3 (313-360)||(5117219-5117266)
chr3 (466-585)||(6113401-6113520)
chr3 (466-585)||(6120293-6120412)
chr3 (313-360)||(7868733-7868779)
chr3 (313-348)||(13800678-13800713)
chr3 (313-372)||(14741805-14741864)
chr3 (313-360)||(22486694-22486741)
chr3 (316-351)||(36690026-36690061)
chr3 (313-360)||(38869521-38869568)
chr3 (313-360)||(39869810-39869857)
chr3 (311-346)||(42943309-42943344)
chr3 (313-360)||(53633620-53633667)
chr3 (311-361)||(1743992-1744042)
chr3 (311-345)||(5135090-5135124)
chr3 (328-362)||(7859493-7859527)
chr3 (317-351)||(26973376-26973410)
chr3 (312-358)||(28266726-28266772)
chr3 (311-357)||(28430571-28430617)
chr3 (324-362)||(28965778-28965816)
chr3 (313-371)||(35191809-35191867)
chr3 (313-363)||(38559896-38559946)
chr3 (313-359)||(39100420-39100466)
chr3 (315-373)||(40359795-40359853)
chr3 (315-353)||(41258984-41259022)
chr3 (607-691)||(797462-797547)
chr3 (313-362)||(2563940-2563989)
chr3 (311-364)||(4033429-4033482)
chr3 (313-362)||(7464492-7464541)
chr3 (615-691)||(9507555-9507632)
chr3 (615-691)||(9515530-9515607)
chr3 (838-875)||(10514019-10514056)
chr3 (313-357)||(12043102-12043147)
chr3 (313-350)||(16980367-16980404)
chr3 (315-348)||(21245806-21245839)
chr3 (313-362)||(21914072-21914121)
chr3 (313-362)||(23653223-23653272)
chr3 (313-362)||(28244105-28244154)
chr3 (313-362)||(41291735-41291784)
chr3 (312-357)||(47040900-47040945)
[»] chr4 (57 HSPs)
chr4 (28-211)||(7108988-7109171)
chr4 (28-209)||(7103675-7103856)
chr4 (758-896)||(25793976-25794114)
chr4 (32-185)||(40756617-40756770)
chr4 (29-207)||(2058964-2059142)
chr4 (34-170)||(11423001-11423137)
chr4 (137-185)||(28033549-28033597)
chr4 (313-361)||(36071155-36071203)
chr4 (28-103)||(9742168-9742243)
chr4 (28-103)||(9745695-9745770)
chr4 (28-103)||(9747861-9747936)
chr4 (316-362)||(36479005-36479051)
chr4 (313-362)||(19908703-19908752)
chr4 (321-373)||(29568605-29568657)
chr4 (313-373)||(34595926-34595986)
chr4 (313-364)||(7190447-7190498)
chr4 (311-362)||(50668349-50668400)
chr4 (319-373)||(1657020-1657074)
chr4 (311-361)||(51465346-51465396)
chr4 (328-373)||(1701635-1701680)
chr4 (313-362)||(3936638-3936687)
chr4 (313-362)||(34960158-34960207)
chr4 (311-348)||(50380851-50380888)
chr4 (313-362)||(56551593-56551642)
chr4 (311-363)||(684994-685046)
chr4 (313-357)||(22411775-22411819)
chr4 (313-357)||(23160051-23160095)
chr4 (313-373)||(29808258-29808318)
chr4 (313-357)||(39842018-39842062)
chr4 (313-373)||(43722776-43722836)
chr4 (313-357)||(46434766-46434810)
chr4 (313-373)||(46676488-46676548)
chr4 (314-362)||(49473657-49473705)
chr4 (313-357)||(56096215-56096259)
chr4 (313-360)||(17656797-17656843)
chr4 (319-362)||(32923204-32923247)
chr4 (313-348)||(32923245-32923280)
chr4 (328-363)||(34968009-34968044)
chr4 (311-362)||(44221456-44221507)
chr4 (317-360)||(45029608-45029651)
chr4 (313-356)||(47704593-47704636)
chr4 (313-363)||(7230291-7230341)
chr4 (335-373)||(32200791-32200829)
chr4 (313-363)||(48223578-48223628)
chr4 (312-346)||(50937565-50937599)
chr4 (313-362)||(3299095-3299144)
chr4 (313-362)||(12058330-12058379)
chr4 (313-346)||(18004476-18004509)
chr4 (315-348)||(22164284-22164317)
chr4 (320-373)||(25978335-25978388)
chr4 (328-373)||(26315789-26315834)
chr4 (313-362)||(28435249-28435298)
chr4 (313-362)||(40070969-40071018)
chr4 (313-370)||(42756099-42756156)
chr4 (31-108)||(44527279-44527355)
chr4 (313-342)||(44689503-44689532)
chr4 (313-362)||(51436607-51436656)
[»] chr7 (40 HSPs)
chr7 (28-207)||(11790744-11790923)
chr7 (28-185)||(14069160-14069317)
chr7 (28-185)||(14379188-14379345)
chr7 (30-195)||(9112048-9112213)
chr7 (28-211)||(25616562-25616744)
chr7 (313-363)||(38553829-38553879)
chr7 (313-362)||(10236906-10236955)
chr7 (312-362)||(7908603-7908653)
chr7 (313-363)||(29237557-29237607)
chr7 (313-363)||(32513169-32513219)
chr7 (313-362)||(34722021-34722071)
chr7 (313-362)||(9522923-9522972)
chr7 (313-362)||(21105614-21105663)
chr7 (313-362)||(27833402-27833451)
chr7 (320-357)||(42227811-42227848)
chr7 (313-362)||(46987097-46987146)
chr7 (313-373)||(2618690-2618750)
chr7 (313-361)||(39049684-39049732)
chr7 (313-357)||(39280824-39280868)
chr7 (313-348)||(15015252-15015287)
chr7 (313-348)||(22327689-22327724)
chr7 (313-372)||(27270246-27270305)
chr7 (315-362)||(41619396-41619443)
chr7 (313-351)||(3536266-3536304)
chr7 (311-349)||(23374644-23374682)
chr7 (313-363)||(24225981-24226031)
chr7 (313-363)||(27158887-27158937)
chr7 (312-346)||(31885962-31885996)
chr7 (313-362)||(2391018-2391067)
chr7 (318-351)||(2756256-2756289)
chr7 (312-341)||(4335966-4335995)
chr7 (313-342)||(4398337-4398366)
chr7 (313-362)||(7872749-7872798)
chr7 (313-362)||(18714459-18714508)
chr7 (313-362)||(22690037-22690086)
chr7 (325-362)||(24099236-24099273)
chr7 (313-362)||(27263352-27263401)
chr7 (312-361)||(38139568-38139617)
chr7 (313-373)||(40890233-40890295)
chr7 (313-362)||(43539105-43539154)
[»] chr8 (48 HSPs)
chr8 (28-185)||(19237434-19237591)
chr8 (28-185)||(19310618-19310775)
chr8 (28-185)||(8969962-8970119)
chr8 (28-185)||(16435933-16436090)
chr8 (31-211)||(9492767-9492947)
chr8 (313-373)||(36919322-36919382)
chr8 (313-373)||(9070969-9071029)
chr8 (322-373)||(3102328-3102379)
chr8 (315-372)||(13477913-13477970)
chr8 (313-362)||(44019560-44019609)
chr8 (313-357)||(1230667-1230711)
chr8 (313-373)||(19778076-19778136)
chr8 (313-373)||(32878672-32878732)
chr8 (313-373)||(33445581-33445641)
chr8 (321-360)||(44146742-44146781)
chr8 (317-363)||(8078100-8078146)
chr8 (313-363)||(42208469-42208519)
chr8 (313-362)||(9655998-9656047)
chr8 (312-360)||(4830018-4830066)
chr8 (313-360)||(10320507-10320554)
chr8 (313-360)||(21557444-21557491)
chr8 (315-362)||(32192907-32192954)
chr8 (132-211)||(38311879-38311958)
chr8 (313-360)||(38489205-38489252)
chr8 (313-360)||(39774950-39774997)
chr8 (313-348)||(43073451-43073486)
chr8 (313-351)||(8020321-8020359)
chr8 (313-363)||(8717475-8717525)
chr8 (313-371)||(13105105-13105163)
chr8 (313-363)||(13357441-13357491)
chr8 (615-708)||(22930988-22931082)
chr8 (313-363)||(27750904-27750954)
chr8 (315-373)||(29924907-29924965)
chr8 (313-363)||(35102667-35102717)
chr8 (313-351)||(36588106-36588144)
chr8 (311-357)||(37141366-37141412)
chr8 (313-362)||(3650531-3650580)
chr8 (311-348)||(7968955-7968992)
chr8 (317-362)||(9241030-9241075)
chr8 (317-362)||(10732776-10732821)
chr8 (313-362)||(11104775-11104824)
chr8 (313-342)||(18533680-18533709)
chr8 (313-362)||(20469312-20469361)
chr8 (313-370)||(27129093-27129150)
chr8 (313-362)||(30623304-30623353)
chr8 (313-370)||(31888037-31888094)
chr8 (326-363)||(32115406-32115443)
chr8 (313-362)||(38282840-38282889)
[»] chr5 (48 HSPs)
chr5 (32-211)||(32401868-32402046)
chr5 (28-184)||(27214255-27214411)
chr5 (318-360)||(18981192-18981234)
chr5 (128-185)||(4719225-4719282)
chr5 (312-373)||(21657388-21657449)
chr5 (313-373)||(9123835-9123895)
chr5 (313-373)||(43108580-43108640)
chr5 (319-370)||(2951361-2951411)
chr5 (313-348)||(24438558-24438593)
chr5 (313-363)||(18391611-18391661)
chr5 (313-362)||(5107246-5107295)
chr5 (313-350)||(12909179-12909216)
chr5 (317-362)||(22745904-22745949)
chr5 (313-362)||(26409264-26409313)
chr5 (313-362)||(26655475-26655524)
chr5 (313-362)||(26927060-26927109)
chr5 (312-357)||(27903123-27903168)
chr5 (313-362)||(31602826-31602875)
chr5 (311-348)||(36162904-36162941)
chr5 (313-362)||(39143725-39143774)
chr5 (313-361)||(2705518-2705566)
chr5 (317-361)||(13547462-13547506)
chr5 (312-360)||(16752505-16752553)
chr5 (313-361)||(23118053-23118101)
chr5 (313-373)||(26034598-26034658)
chr5 (315-351)||(27651542-27651578)
chr5 (313-373)||(31708136-31708196)
chr5 (313-362)||(35807742-35807793)
chr5 (313-360)||(11647208-11647255)
chr5 (313-348)||(18278274-18278309)
chr5 (313-364)||(31545882-31545933)
chr5 (313-360)||(34702501-34702548)
chr5 (313-363)||(6894107-6894157)
chr5 (313-359)||(15105114-15105160)
chr5 (326-360)||(42854323-42854357)
chr5 (313-342)||(1669601-1669630)
chr5 (312-373)||(3955556-3955617)
chr5 (313-362)||(11637573-11637622)
chr5 (312-349)||(16193117-16193154)
chr5 (313-362)||(16579375-16579424)
chr5 (312-361)||(25709743-25709792)
chr5 (313-362)||(29695026-29695075)
chr5 (313-357)||(29904431-29904476)
chr5 (329-362)||(37073769-37073802)
chr5 (312-357)||(37791169-37791214)
chr5 (313-362)||(37932341-37932390)
chr5 (313-342)||(39917905-39917934)
chr5 (311-348)||(42515816-42515853)
[»] scaffold0524 (1 HSPs)
scaffold0524 (35-185)||(10023-10173)
[»] chr2 (46 HSPs)
chr2 (28-177)||(17538705-17538854)
chr2 (28-211)||(26024532-26024718)
chr2 (28-105)||(5953598-5953675)
chr2 (313-373)||(37320507-37320567)
chr2 (89-211)||(23496863-23496975)
chr2 (313-362)||(25274830-25274879)
chr2 (313-373)||(12124556-12124616)
chr2 (316-356)||(21497681-21497721)
chr2 (313-361)||(35727448-35727496)
chr2 (312-351)||(2429026-2429065)
chr2 (312-351)||(44488022-44488061)
chr2 (313-359)||(13196711-13196757)
chr2 (313-362)||(8542959-8543008)
chr2 (313-346)||(20517033-20517066)
chr2 (312-373)||(22520227-22520288)
chr2 (313-362)||(24593387-24593436)
chr2 (313-373)||(2687365-2687424)
chr2 (313-353)||(3196571-3196611)
chr2 (313-361)||(4238770-4238818)
chr2 (313-373)||(12124695-12124755)
chr2 (313-357)||(20120727-20120771)
chr2 (313-357)||(25395448-25395492)
chr2 (322-362)||(43356543-43356583)
chr2 (313-360)||(12893247-12893294)
chr2 (313-360)||(16221349-16221396)
chr2 (313-348)||(23250335-23250370)
chr2 (313-352)||(26133531-26133570)
chr2 (313-352)||(33966332-33966371)
chr2 (314-360)||(34843517-34843563)
chr2 (313-360)||(40099387-40099433)
chr2 (315-373)||(10065486-10065544)
chr2 (315-361)||(15612962-15613008)
chr2 (312-362)||(34903527-34903577)
chr2 (313-362)||(35456821-35456871)
chr2 (313-363)||(40967371-40967421)
chr2 (313-350)||(145024-145061)
chr2 (328-373)||(2264823-2264868)
chr2 (315-348)||(6579296-6579329)
chr2 (313-362)||(6765621-6765670)
chr2 (313-346)||(20644015-20644048)
chr2 (313-362)||(24393256-24393305)
chr2 (325-362)||(24581018-24581055)
chr2 (313-362)||(27935067-27935116)
chr2 (313-362)||(28771593-28771642)
chr2 (316-349)||(32957557-32957590)
chr2 (313-362)||(43117191-43117240)
[»] chr1 (52 HSPs)
chr1 (313-362)||(21015973-21016022)
chr1 (312-360)||(9413808-9413856)
chr1 (313-373)||(30795712-30795772)
chr1 (83-211)||(43542131-43542259)
chr1 (313-373)||(27023646-27023705)
chr1 (315-362)||(17221521-17221568)
chr1 (313-362)||(34083348-34083397)
chr1 (313-373)||(10132434-10132494)
chr1 (312-348)||(25271778-25271814)
chr1 (53-185)||(31438456-31438587)
chr1 (313-365)||(35442866-35442918)
chr1 (312-359)||(32826709-32826756)
chr1 (313-360)||(34808566-34808613)
chr1 (313-362)||(2613733-2613782)
chr1 (313-362)||(9398414-9398463)
chr1 (313-362)||(33153881-33153930)
chr1 (328-369)||(45652113-45652154)
chr1 (313-362)||(47528448-47528497)
chr1 (313-357)||(2817379-2817423)
chr1 (313-349)||(3573338-3573374)
chr1 (312-372)||(7652111-7652171)
chr1 (313-373)||(17283962-17284022)
chr1 (315-351)||(22821069-22821105)
chr1 (313-373)||(37045136-37045196)
chr1 (313-360)||(1408446-1408493)
chr1 (313-356)||(24124837-24124880)
chr1 (314-361)||(25942654-25942701)
chr1 (315-362)||(30561736-30561783)
chr1 (313-360)||(32874392-32874439)
chr1 (313-360)||(38448869-38448916)
chr1 (313-348)||(41926833-41926868)
chr1 (320-351)||(42860125-42860156)
chr1 (313-348)||(44243884-44243919)
chr1 (314-360)||(12500935-12500981)
chr1 (136-206)||(15262439-15262509)
chr1 (311-361)||(45481502-45481552)
chr1 (313-351)||(48681945-48681983)
chr1 (313-351)||(50849085-50849123)
chr1 (313-362)||(6000144-6000193)
chr1 (314-343)||(6519900-6519929)
chr1 (313-362)||(9872106-9872155)
chr1 (313-362)||(12268985-12269034)
chr1 (313-362)||(13615613-13615662)
chr1 (313-362)||(18056717-18056766)
chr1 (315-348)||(22946565-22946598)
chr1 (313-342)||(25365017-25365046)
chr1 (313-362)||(26329123-26329172)
chr1 (313-362)||(27533254-27533303)
chr1 (313-362)||(28039861-28039910)
chr1 (313-350)||(30678826-30678863)
chr1 (315-352)||(43843904-43843941)
chr1 (312-373)||(45190259-45190320)
[»] chr6 (37 HSPs)
chr6 (312-362)||(15062301-15062351)
chr6 (316-357)||(2105919-2105960)
chr6 (313-357)||(32193865-32193909)
chr6 (315-373)||(404176-404234)
chr6 (312-362)||(9111057-9111107)
chr6 (313-362)||(15169942-15169991)
chr6 (313-362)||(15178714-15178763)
chr6 (313-362)||(31971540-31971589)
chr6 (313-361)||(6196533-6196581)
chr6 (313-373)||(9333970-9334030)
chr6 (313-373)||(10118928-10118988)
chr6 (313-357)||(24438288-24438332)
chr6 (326-357)||(4826314-4826345)
chr6 (313-348)||(8138473-8138508)
chr6 (313-360)||(10497155-10497202)
chr6 (313-360)||(12276234-12276281)
chr6 (313-373)||(13655172-13655234)
chr6 (313-360)||(26587403-26587450)
chr6 (313-348)||(32149149-32149184)
chr6 (313-351)||(788877-788915)
chr6 (313-363)||(1989043-1989092)
chr6 (312-362)||(8637438-8637488)
chr6 (315-361)||(15291692-15291738)
chr6 (313-363)||(16390440-16390490)
chr6 (313-363)||(19277585-19277635)
chr6 (312-362)||(23507392-23507442)
chr6 (313-351)||(33938691-33938729)
chr6 (328-362)||(35110080-35110114)
chr6 (313-362)||(2726418-2726467)
chr6 (313-354)||(10320440-10320481)
chr6 (313-350)||(12319256-12319293)
chr6 (313-362)||(12329287-12329336)
chr6 (313-362)||(17829309-17829358)
chr6 (313-362)||(24623318-24623367)
chr6 (313-362)||(28758291-28758340)
chr6 (313-350)||(28951410-28951447)
chr6 (312-357)||(34701157-34701202)
[»] scaffold0129 (1 HSPs)
scaffold0129 (137-173)||(44869-44905)
[»] scaffold0238 (1 HSPs)
scaffold0238 (313-373)||(25400-25460)
[»] scaffold0204 (1 HSPs)
scaffold0204 (321-360)||(16170-16209)
[»] scaffold0026 (1 HSPs)
scaffold0026 (313-360)||(75336-75383)
[»] scaffold1120 (1 HSPs)
scaffold1120 (316-362)||(1927-1973)
[»] scaffold0118 (1 HSPs)
scaffold0118 (313-363)||(40009-40059)
[»] scaffold0012 (1 HSPs)
scaffold0012 (316-354)||(119963-120001)
[»] scaffold0006 (1 HSPs)
scaffold0006 (316-354)||(210087-210125)
[»] scaffold1160 (1 HSPs)
scaffold1160 (313-362)||(1713-1762)
[»] scaffold0328 (1 HSPs)
scaffold0328 (317-362)||(3350-3395)
[»] scaffold0083 (1 HSPs)
scaffold0083 (313-362)||(45954-46003)
[»] scaffold0072 (1 HSPs)
scaffold0072 (313-342)||(25706-25735)
[»] scaffold0041 (1 HSPs)
scaffold0041 (313-373)||(75989-76051)
[»] scaffold0016 (1 HSPs)
scaffold0016 (313-362)||(204601-204650)


Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-138; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 386 - 822
Target Start/End: Original strand, 10658193 - 10658625
Alignment:
Q  386 aagattatgtactatcatgattctgtatttagtttaaaatattaaattagttgctttttagttacgttgttgtcttatttttctaatttcaaaattctta 485  Q
    |||||| ||| |||||||||||||| ||||||| || |||||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||     
T  10658193 aagattttgtgctatcatgattctgcatttagtgtacaatattcaattagttgctttttaattactttgttgtcttatttttctaattttaaaattcttg 10658292  T
Q  486 tagttattgctttgtaatttaagatgatggtaaagaaattaaataagttag-ctaatactactattttgattgtcttcttttctctttattttagagata 584  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||   ||||||| |||||||||||||||||||||||||||  ||||||||     
T  10658293 tagttattgctttgtaatctaagatgatggtaaagaaatgaaataagttagtaaaatactattattttgattgtcttcttttctcttta--ttagagat- 10658389  T
Q  585 ttgccgtagccttctattcaggctggcatgtcacattttcttttcaaccaaactgcttatcataatatctttaatagttaatatagaaattagttttgtt 684  Q
    ||| ||||||||||||||||||||| ||| ||||||||||||| ||| ||      |||||||||||||||||||||||||| || ||||||||||||||    
T  10658390 ttgtcgtagccttctattcaggctgacatatcacattttctttccaatca-----gttatcataatatctttaatagttaatctataaattagttttgtt 10658484  T
Q  685 acttctatgcgtataattttatatttatgttgtaatattgttaccc---nnnnnnnnnngacaaaacactttgttctctttttgtaaaaatgtttgagag 781  Q
    |||||||||||||||||||||||||||||||||||||||||||| |             |||||||||||||||||||||||||||||||||||||||||    
T  10658485 acttctatgcgtataattttatatttatgttgtaatattgttacactttttttttttgtgacaaaacactttgttctctttttgtaaaaatgtttgagag 10658584  T
Q  782 gagcaaaatggttgccactgccacaggattagatttactta 822  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  10658585 gagcaaaatggttgtcactgccacaggattagatttactta 10658625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 208 - 507
Target Start/End: Original strand, 10594583 - 10594882
Alignment:
Q  208 cagagattcgtagatgttttaatgatgctcattgtccaccagatatgtgtacccttggtgtgataccgaagtgtagtaggttcaccatttgtatatgtta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10594583 cagagattcgtagatgttttaatgatgctcattgtccaccagatatgtgtacccttggtgtgataccgaagtgtagtaggttcaccatttgtatatgtta 10594682  T
Q  308 accattcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccacnnnnnnnnctaaaagattatgtactatcatgatt 407  Q
    ||||||||||||||||| ||||||||||||||||| ||||||   ||||| |||||| |||||||         ||||||||||||||||||||||||||    
T  10594683 accattcagttggtaaggacaatgcataatatatgcaaggtttagggttcaaaccttggacaccaaaaaaaaaactaaaagattatgtactatcatgatt 10594782  T
Q  408 ctgtatttagtttaaaatattaaattagttgctttttagttacgttgttgtcttatttttctaatttcaaaattcttatagttattgctttgtaatttaa 507  Q
    ||  ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10594783 ctacatttactttaaaatattgaattagttgctttttagttactttgttgtcttatttttctaatttcaaaattcttatagttattgctttgtaatttaa 10594882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 390 - 728
Target Start/End: Original strand, 10513675 - 10514007
Alignment:
Q  390 ttatgtactatcatgattctgtatttagtttaaaatattaaattagttgctttttagttacgttgttgtcttatttttctaatttcaaaattcttatagt 489  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10513675 ttatctactatcatgattctacatttagtttaaaatattaaattagttgctttttagttac-ttgttgtcttatttttctaatttcaaaattcttatagt 10513773  T
Q  490 tattgctttgtaatttaagatgatggtaaagaaattaaataagttag-ctaatactactattttgattgtcttcttttctctttattttagagatattgc 588  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||   ||||||| ||||||||||||||| |||||||||||||||||||| ||||     
T  10513774 tattgctttttaatttaggatgatggtaaagaaatgaaataagttagtaaaatactattattttgattgtcttattttctctttattttagagagattgt 10513873  T
Q  589 cgtagccttctattcaggctggcatgtcacattttcttttcaaccaaactgcttatcataatatctttaatagttaatatagaaattagttttgttactt 688  Q
     ||||||||||||||||||| | || ||||||||||||| ||| ||      |||||||||||||||||||||||||| |||||||||||||||||||||    
T  10513874 tgtagccttctattcaggct-gaatatcacattttctttccaatca-----gttatcataatatctttaatagttaatctagaaattagttttgttactt 10513967  T
Q  689 ctatgcgtataattttatatttatgttgtaatattgttac 728  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10513968 ctatgcgtataattttatatttatgttgtaatattgttac 10514007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 382 - 728
Target Start/End: Original strand, 10510481 - 10510814
Alignment:
Q  382 ctaaaagattatgtactatcatgattctgtatttagtttaaaatattaaattagttgctttttagttacgttgttgtcttatttttctaatttcaaaatt 481  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  10510481 ctaaaagattatgtactatcatgattctgcatttagtgtacaatattcaattagttgctttttagttactttgttatcttatttttctaatttcaaaatc 10510580  T
Q  482 cttatagttattgctttgtaatttaagatgatggtaaagaaattaaataagttagctaa-tactactattttgattgtcttcttttctctttattttaga 580  Q
    |||              |||||  ||||||||||||||||||| |||||||||||  || |||||||||||||||||||||| |||||||||||||||||    
T  10510581 ctt--------------gtaatcaaagatgatggtaaagaaatgaaataagttagtaaaatactactattttgattgtcttcgtttctctttattttaga 10510666  T
Q  581 gatattgccgtagccttctattcaggctggcatgtcacattttcttttcaaccaaactgcttatcataatatctttaatagttaatatagaaattagttt 680  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  10510667 gatattgtcgtagccttctattcaggctgacatatcacattttctttccaaccatactgcttatcataatatctttaatagttaagctagaaattagttt 10510766  T
Q  681 tgttacttctatgcgtataattttatatttatgttgtaatattgttac 728  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10510767 tgttacttctatgcgtataattttatatttatgttgtaatattgttac 10510814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 10513538 - 10513668
Alignment:
Q  208 cagagattcgtagatgttttaatgatgctcattgtccaccagatatgtgtacccttggtgtgataccgaagtgtagtaggttcaccatttgtatatgtta 307  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||    
T  10513538 cagagattcgtacatgttttaatgatgctcattgtccaccagatatgtgtacccttggtgtgataccgaagt---gaaggttcaccatttgtatatgtta 10513634  T
Q  308 accattcagttggtaagaacaatgcataatatat 341  Q
    ||||||||||||||||| ||||||||||||||||    
T  10513635 accattcagttggtaaggacaatgcataatatat 10513668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 868 - 963
Target Start/End: Original strand, 10658626 - 10658721
Alignment:
Q  868 ttcataatctgcataagcaagagtagaatgaaatcatgataataatattctcaattcacatatgcatgtgattgtgaacaatcttatggtaaaaaa 963  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10658626 ttcataatctgcataagcaagagtagaatgaaatcgtgataataatattctcaattcacatatgcatgtgattgtgaacaatcttatggtaaaaaa 10658721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 10510371 - 10510478
Alignment:
Q  208 cagagattcgtagatgttttaatgatgctcattgtccaccagatatgtgtacccttggtgtgataccgaagtgtagtaggttcaccatttgtatatgtta 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||| |||||||||||||| ||||||    
T  10510371 cagagattcgtagatgttttaatgatgctcattgtccaccagatatgtgtacccctggtgtgataccgaagt---gtaagttcaccatttgtaaatgtta 10510467  T
Q  308 accattcagtt 318  Q
    |||||| ||||    
T  10510468 accattgagtt 10510478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 891 - 963
Target Start/End: Original strand, 10514059 - 10514131
Alignment:
Q  891 tagaatgaaatcatgataataatattctcaattcacatatgcatgtgattgtgaacaatcttatggtaaaaaa 963  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10514059 tagaatgaaatcgtgataataatattctcaattcacatatgcatgtgattgtgaacaatcttatggtaaaaaa 10514131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 19625216 - 19625070
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagt-g 126  Q
    ||||||||| || ||| ||||||| ||||||||||||||||||||| ||||||| ||||| ||| |||||||| || | || || | |||||||| || |    
T  19625216 gtggaggtctaagtttgccaatatctgatgttcattggacacctctttttagtggtttctgtaaacttaatgtcgatgcagaaggtccgatagagggtgg 19625117  T
Q  127 ataaatgggatattggtgttgtggtgagagataatgaagatgttgtc 173  Q
     ||| ||||||||||||||| |||||||||||||||||| |||||||    
T  19625116 gtaagtgggatattggtgttttggtgagagataatgaaggtgttgtc 19625070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 758 - 894
Target Start/End: Complemental strand, 10377678 - 10377540
Alignment:
Q  758 tctttttgtaaaaatgtttgagaggagcaaaatggttgccactgccacaggattagatttacttagctattcagtttgtattttcttataatctc--cat 855  Q
    |||| |||||||||| |||||||||||||||| ||  | || |||||||||||||||||||||| | |||||||| ||||||||||||| || ||  |||    
T  10377678 tcttcttgtaaaaatatttgagaggagcaaaacggccgtcattgccacaggattagatttacttgggtattcagtctgtattttcttatcatatcgacat 10377579  T
Q  856 ctttttatatccttcataatctgcataagcaagagtaga 894  Q
    | || |||||||| |||||| |||| |||||||| ||||    
T  10377578 cattgtatatcctacataatttgcacaagcaagattaga 10377540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 9491257 - 9491113
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacc-tctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtg 126  Q
    |||||||||||||||| |||| || | |||||||||||||||| ||| |||| || ||||| |||| |||||||||| | || || | |||||||| | |    
T  9491257 gtggaggtccaattttgccaacatcttatgttcattggacaccatct-tttaatggtttctataagtttaatgttgatgcagtaggtccgatagaggggg 9491159  T
Q  127 ataaatgggatattggtgttgtggtgagagataatgaagatgttgt 172  Q
    |||| |||| | |||||||||||||||||||| ||| || ||||||    
T  9491158 ataagtggggttttggtgttgtggtgagagattatgtaggtgttgt 9491113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 19646256 - 19646203
Alignment:
Q  132 tgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  19646256 tgggatattggtgttgtggtgagagataatgaaggtgttgtcattgctgctagt 19646203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 35492804 - 35492851
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||    
T  35492804 tcagttggtaagaacaatgcataatatatgcaaagttcgaggttcgaa 35492851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 1661757 - 1661687
Alignment:
Q  33 ggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttga 103  Q
    |||| |||||| ||||||||||||||||||||||||  |   ||||||||||||| |||||||||||||||    
T  1661757 ggtctaattttgccaatatatgatgttcattggacatattcttttagtgatttctataagcttaatgttga 1661687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 53681927 - 53681869
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacacc 371  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||| | ||||||    
T  53681927 tcagttggtaagaacaatgcataatatatgcaagatttgaggttcgaaccctggacacc 53681869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 52119387 - 52119436
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  52119387 tcagttggtaaggacaatgcataatatatgcaaggttcggggttcgaacc 52119436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 10658128 - 10658186
Alignment:
Q  257 tacccttggtgtgataccgaagtgtagtaggttcaccatttgtatatgttaaccattcagtt 318  Q
    |||||||||||||||||||||||   |||||||| ||||||||| |||||||||||| ||||    
T  10658128 tacccttggtgtgataccgaagt---gtaggttccccatttgtaaatgttaaccattgagtt 10658186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 5702227 - 5702178
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  5702227 tcagttggtaaga-caatgcataatatatgcaaggtttgaggttcgaacct 5702178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 813 - 887
Target Start/End: Complemental strand, 10440944 - 10440870
Alignment:
Q  813 gatttacttagctattcagtttgtattttcttataatctccatctttttatatccttcataatctgcataagcaa 887  Q
    ||||||||||| |||||||| ||||||||||||| |||  |||| || |||||||| |||||| |||| ||||||    
T  10440944 gatttacttagttattcagtctgtattttcttatcatcggcatcattgtatatcctacataatttgcacaagcaa 10440870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 30200837 - 30200886
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| |||| ||||||||||||||||| |||||| ||||||||||||    
T  30200837 tcagttgctaaggacaatgcataatatatgcaaggtttgaggttcgaacc 30200886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 41990634 - 41990585
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||| ||||||||||| ||||||||||| ||||| |||||||||||||    
T  41990634 tcagtttgtaagaacaatacataatatatgcaaggtccgaggttcgaacc 41990585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 54230149 - 54230100
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| |||||| | ||||||||||    
T  54230149 tcagttggtaaggacaatgcataatatatgcaaggtttggggttcgaacc 54230100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 10926480 - 10926524
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||    
T  10926480 tcagttggtaaggacaatgcataatatatgcaaggttcggggttc 10926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 19939091 - 19939043
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||||||||||||||||||||||| |||||  | |||||||||    
T  19939091 tcagttggtaagaacaatgcataatatatgaaaggtctggggttcgaac 19939043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 26832314 - 26832354
Alignment:
Q  131 atgggatattggtgttgtggtgagagataatgaagatgttg 171  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  26832314 atgggatattggtgttgttgtgagagatagtgaagatgttg 26832354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 28148518 - 28148458
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||||| |||| |||| ||||| ||||||| |||||| |||| ||||||||||    
T  28148518 tcagttggtaagaataatgtataaaatatgcaaggttcaaggttcaaaccctagacaccac 28148458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 43630464 - 43630424
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  43630464 ttggtatgaacaatgcataatatatgtaaggtttgaggttc 43630424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 45254242 - 45254278
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggtt 349  Q
    |||||||||||| ||||||||||||||||||||||||    
T  45254242 tcagttggtaaggacaatgcataatatatgtaaggtt 45254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 47377399 - 47377355
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||| ||||||||||||||||  ||||||||||||||    
T  47377399 tcagttggtaaggacaatgcataatatatacaaggttcgaggttc 47377355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 48688126 - 48688173
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||    
T  48688126 tcagttggtatga-caatgcataatatatgtaaggtttgaggttcgaac 48688173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 5117219 - 5117266
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||| |||| ||||| |||||||||||||||||| ||||||||||    
T  5117219 tcagttgataaggacaatacataatatatgtaaggtttgaggttcgaa 5117266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 585
Target Start/End: Original strand, 6113401 - 6113520
Alignment:
Q  466 ttctaatttcaaaattcttatagttattgctttgtaatttaagatgatggtaaagaaattaaataagttagctaatactactattttgattgtcttcttt 565  Q
    |||||||||||| |  ||| |||| || |||||||| | |||||||||||||| ||||| ||||||| |||  |||| ||  |||  ||||||||| ||     
T  6113401 ttctaatttcaagaaccttgtagtaatggctttgtactctaagatgatggtaatgaaatcaaataagatagtgaataatatcattaagattgtctttttg 6113500  T
Q  566 tctctttattttagagatat 585  Q
    ||| || |||||||||||||    
T  6113501 tctattaattttagagatat 6113520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 466 - 585
Target Start/End: Original strand, 6120293 - 6120412
Alignment:
Q  466 ttctaatttcaaaattcttatagttattgctttgtaatttaagatgatggtaaagaaattaaataagttagctaatactactattttgattgtcttcttt 565  Q
    |||||||||||| |  ||| |||| || |||||||| | |||||||||||||| ||||| ||||||| |||  |||| ||  |||  |||| |||| ||     
T  6120293 ttctaatttcaagaaccttgtagtaatggctttgtactctaagatgatggtaatgaaatcaaataagatagtgaataatatcattaagattatctttttg 6120392  T
Q  566 tctctttattttagagatat 585  Q
    |||||| |||||||||||||    
T  6120393 tctcttaattttagagatat 6120412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 7868733 - 7868779
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  7868733 tcagttggtaagaacaatgcataatatatgcaaagttcg-ggttcgaa 7868779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 13800678 - 13800713
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||||||||||||||||||||| |||||    
T  13800678 tcagttggtaagaacaatgcataatatatgcaaggt 13800713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 14741805 - 14741864
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacacca 372  Q
    |||||||||||| ||||||||||||||||| |||||| |  ||||||||||  |||||||    
T  14741805 tcagttggtaaggacaatgcataatatatgcaaggtttggagttcgaacctcggacacca 14741864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 22486694 - 22486741
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||||||||||| ||| || | ||||||||    
T  22486694 tcagttggtaagaacaatgcataatatatgcaagatttggggttcgaa 22486741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 351
Target Start/End: Original strand, 36690026 - 36690061
Alignment:
Q  316 gttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    ||||||| ||||||||||||||||||||||||||||    
T  36690026 gttggtaggaacaatgcataatatatgtaaggttcg 36690061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 38869568 - 38869521
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||||||||||  ||| | |||||||||||    
T  38869568 tcagttggtaagaacaatgcataatatatacaagatccgaggttcgaa 38869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 39869857 - 39869810
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||| ||||||||||||||||  ||||| |||||||||||    
T  39869857 tcagttggtaaggacaatgcataatatatacaaggtccgaggttcgaa 39869810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 346
Target Start/End: Original strand, 42943309 - 42943344
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaag 346  Q
    |||||||||||||||||||||||||||||| |||||    
T  42943309 attcagttggtaagaacaatgcataatatacgtaag 42943344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 53633667 - 53633620
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||| | ||||||||||||||||||||| || ||||||||    
T  53633667 tcagttggtaaggataatgcataatatatgtaaggtccggggttcgaa 53633620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 1744042 - 1743992
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||||| | ||||| ||||||||||| |||||||| |||||||||    
T  1744042 attcagttggtatggacaatacataatatatgcaaggttcggggttcgaac 1743992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 345
Target Start/End: Original strand, 5135090 - 5135124
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaa 345  Q
    |||||||||||||| ||||||||||||||||||||    
T  5135090 attcagttggtaaggacaatgcataatatatgtaa 5135124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 7859527 - 7859493
Alignment:
Q  328 aatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||||||| ||||||||||    
T  7859527 aatgcataatatatgtaaggttcggggttcgaacc 7859493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 317 - 351
Target Start/End: Original strand, 26973376 - 26973410
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||| ||||||||||||||||||||||||||    
T  26973376 ttggtaaggacaatgcataatatatgtaaggttcg 26973410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 28266726 - 28266772
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcg 358  Q
    ||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  28266726 ttcagttggtaaggacaatgcataatatatgcaaggtccggggttcg 28266772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 28430617 - 28430571
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||| ||||||||||||||||||| |||||  |||||||    
T  28430617 attcagttggtacgaacaatgcataatatatgcaaggtctgaggttc 28430571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 28965816 - 28965778
Alignment:
Q  324 gaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  28965816 gaacaatgcataatatatgtaaggttcggggttcaaacc 28965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 35191867 - 35191809
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacacc 371  Q
    |||||||||||| ||||||||||||||||| |||||  | ||||||||||  |||||||    
T  35191867 tcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccccagacacc 35191809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 38559946 - 38559896
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||| |||||||||||||||||| ||||||  |||||| ||||||    
T  38559946 tcagttggtatgaacaatgcataatatatataaggtctgaggtttgaacct 38559896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 39100466 - 39100420
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcga 359  Q
    ||||||| |||||||||||||||||||||  |||||| |||||||||    
T  39100466 tcagttgataagaacaatgcataatatatacaaggtttgaggttcga 39100420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 40359853 - 40359795
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||||||||||| | || |||||| |||||||||||||| |||||| ||| |||||    
T  40359853 agttggtaagaacaacgtatgatatatataaggttcgaggtttgaacctcagataccac 40359795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 315 - 353
Target Start/End: Original strand, 41258984 - 41259022
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgag 353  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  41258984 agttggtaaggacaatgcataatatatgcaaggttcgag 41259022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 607 - 691
Target Start/End: Original strand, 797462 - 797547
Alignment:
Q  607 ctggcatgtcacattttcttttcaaccaaactgcttatcataatatctttaatagttaa-tatagaaattagttttgttacttcta 691  Q
    ||||||| ||||||||||||| | |||| || |||||| ||||||| ||||||| |||| | || ||| |||||||| ||||||||    
T  797462 ctggcatatcacattttctttcccaccataccgcttattataatatgtttaatatttaattttacaaaatagttttgctacttcta 797547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 2563940 - 2563989
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| ||| || |||| ||||||||||||||||||||||||| ||||    
T  2563940 tcagttgataaaaataatgaataatatatgtaaggttcgaggttcaaacc 2563989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 4033429 - 4033482
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacctt 364  Q
    ||||||||| || ||||||||||||||||||||||| || |  |||||||||||    
T  4033429 attcagttgatatgaacaatgcataatatatgtaagatttggtgttcgaacctt 4033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 7464541 - 7464492
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||||||||| || ||||| ||||    
T  7464541 tcagttggtagggacaatgcataatatatgtaaggtccggggttcaaacc 7464492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 691
Target Start/End: Complemental strand, 9507632 - 9507555
Alignment:
Q  615 tcacattttcttttcaaccaaactgcttatcataatatctttaatagttaa-tatagaaattagttttgttacttcta 691  Q
    ||||||||||||||| |||| || ||| || ||||||||| |||||||||| | || |||  ||||||||||||||||    
T  9507632 tcacattttcttttccaccataccgctcattataatatctgtaatagttaagtttacaaaacagttttgttacttcta 9507555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 615 - 691
Target Start/End: Complemental strand, 9515607 - 9515530
Alignment:
Q  615 tcacattttcttttcaaccaaactgcttatcataatatctttaatagttaa-tatagaaattagttttgttacttcta 691  Q
    ||||||||||||||| |||| || ||| || ||||||||| |||||||||| | || |||  ||||||||||||||||    
T  9515607 tcacattttcttttccaccataccgctcattataatatctgtaatagttaagtttacaaaacagttttgttacttcta 9515530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 838 - 875
Target Start/End: Original strand, 10514019 - 10514056
Alignment:
Q  838 ttttcttataatctccatctttttatatccttcataat 875  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  10514019 ttttcttatcatctccatttttttatatccttcataat 10514056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 12043147 - 12043102
Alignment:
Q  313 tcagttggtaagaacaatgcat-aatatatgtaaggttcgaggttc 357  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||||    
T  12043147 tcagttggtaaggacaatgcattaatatatgcaaggttcgaggttc 12043102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 16980404 - 16980367
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttc 350  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  16980404 tcagttggtaaggacaatgcataatatatgcaaggttc 16980367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 21245806 - 21245839
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||| |||||||||||||||||||||||    
T  21245806 agttggtaaggacaatgcataatatatgtaaggt 21245839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 21914121 - 21914072
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| |||||  | ||||||||||    
T  21914121 tcagttggtaaggacaatgcataatatatgcaaggtatggggttcgaacc 21914072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 23653272 - 23653223
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||| ||||||||||||| | || ||| ||||||||||    
T  23653272 tcagttggtaagaacattgcataatatatgcaggggtcggggttcgaacc 23653223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 28244154 - 28244105
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||||||||||||| ||||| ||||| || ||||||||||    
T  28244154 tcagttggtatgaacaatgcataaaatatgcaaggtccggggttcgaacc 28244105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 41291735 - 41291784
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||||||||| |||| ||||| |||||||  ||||||||||    
T  41291735 tcagttggtaagaacaatgaataaaatatgcaaggttctgggttcgaacc 41291784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 47040945 - 47040900
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||| || |||||||||||||| ||||||||||||| |||||    
T  47040945 ttcagttgatatgaacaatgcataatgtatgtaaggttcggggttc 47040900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 6e-49; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 7108988 - 7109171
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||| ||||| |||||||||||| |||| || |  | |||||||| ||||    
T  7108988 gtggaggtccaattttgccaatatctgatgttcattggacacctccttttagtggtttctataagcttaatgtcgacgcagaaagtccgatagagggtga 7109087  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattaccaga 211  Q
    ||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| || ||||| ||||||    
T  7109088 taagtggggtattggtgttgtggtgagagataatgaaggtgttgtcgttggtgctagttcttggcaagtcttttcatcaccaga 7109171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 7103675 - 7103856
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||  ||||||| ||||| ||||||||||||||||| || |  | |||||||| ||||    
T  7103675 gtggaggtccaattttgccaatttctgatgttcattggacacctccttttagtggtttctataagcttaatgttgacgcagaaagtccgatagagggtga 7103774  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattacca 209  Q
    ||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||||| || ||||||||||    
T  7103775 taagtggggtattggtgttgtggtgagagataatgaaggtgttgtcgttgatgctagttattggcaagtcttttcattacca 7103856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 758 - 896
Target Start/End: Original strand, 25793976 - 25794114
Alignment:
Q  758 tctttttgtaaaaatgtttgagaggagcaaaatggttgccactgccacaggattagatttacttagctattcagtttgtattttcttataatctccatct 857  Q
    |||| |||||||||||||||||||||||||| ||||||  | |||||||||||| |||||||| || |||||||||||||||||||||| |||| |||||    
T  25793976 tcttcttgtaaaaatgtttgagaggagcaaattggttgtaattgccacaggattggatttactaagttattcagtttgtattttcttatcatctgcatct 25794075  T
Q  858 ttttatatccttcataatctgcataagcaagagtagaat 896  Q
    || ||||||||||||||||||||||||||||| ||||||    
T  25794076 ttgtatatccttcataatctgcataagcaagattagaat 25794114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 40756770 - 40756617
Alignment:
Q  32 aggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtgataaa 131  Q
    |||||| ||||| ||||||| | |||||||||| |||||||  ||||||| |||||  |||||||||||||| | ||||| | |||||||| ||||||||    
T  40756770 aggtccgattttgccaatatcttatgttcattgaacacctccttttagtggtttctacaagcttaatgttgatgcagcaggtccgatagagggtgataaa 40756671  T
Q  132 tgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40756670 tgggatattggtgttgtggtgagagataatgaaggtgttgtcgttggtgctagt 40756617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 2058964 - 2059142
Alignment:
Q  29 tggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtgat 128  Q
    |||||||||||  ||||  |||||||||||||| ||||| || ||  |||||| ||  | |||||| ||||| |||| | ||| | |||||||| | | |    
T  2058964 tggaggtccaaacttactcatatatgatgttcactggacgccccttattagtggttgatataagctaaatgtggacgcaacaggtccgatagaggggggt 2059063  T
Q  129 aaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattac 207  Q
    ||||| | |||||||||||| |||||||||||||||| ||| ||||||||||||||| ||||| ||| || ||||||||    
T  2059064 aaatgaggtattggtgttgttgtgagagataatgaaggtgtggtcgttggtgctagttgttggaaagtcttttcattac 2059142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 11423137 - 11423001
Alignment:
Q  34 gtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtgataaatg 133  Q
    |||||||||| ||||||| | ||||||||||||||||||  ||||||| ||||| ||| ||||||||||| | ||||  |  |||| ||   | ||||||    
T  11423137 gtccaattttgccaatatttaatgttcattggacacctccttttagtggtttctataatcttaatgttgatgcagcaagtctgataaaggagggtaaatg 11423038  T
Q  134 ggatattggtgttgtggtgagagataatgaagatgtt 170  Q
    || ||| ||||||||||| ||||||||||||| ||||    
T  11423037 gggtatcggtgttgtggtaagagataatgaaggtgtt 11423001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 28033549 - 28033597
Alignment:
Q  137 tattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28033549 tattggtgttgtggtgagagataatgaagatgttgtcgttgatgctagt 28033597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 36071155 - 36071203
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  36071155 tcagttggtaaggacaatgcataatatatgtaaggttcggggttcgaac 36071203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 9742243 - 9742168
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttga 103  Q
    ||||||||||||||||  |||||| ||||||||||| ||||||||  ||||| | ||||| |||||||||||||||    
T  9742243 gtggaggtccaattttgtcaatatctgatgttcatttgacacctccttttagaggtttctataagcttaatgttga 9742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 9745770 - 9745695
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttga 103  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||  ||||||  ||||| |||||||||||||||    
T  9745770 gtggatgtccaattttttcaatatatgatgttcattgaacacctccttttagtagtttctataagcttaatgttga 9745695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 9747936 - 9747861
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttga 103  Q
    |||||||| |||||||  |||||| ||||||||||||||||||||  || |||| ||||| |||||||||||||||    
T  9747936 gtggaggtacaattttttcaatatctgatgttcattggacacctcctttaagtggtttctgtaagcttaatgttga 9747861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 36479005 - 36479051
Alignment:
Q  316 gttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||    
T  36479005 gttggtatggacaatgcataatatatgtaaggttcgaggttcgaacc 36479051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 19908703 - 19908752
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||||    
T  19908703 tcagttggtaaggacaatgcataatatatgcaaggtccgaggttcgaacc 19908752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 29568605 - 29568657
Alignment:
Q  321 taagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||| ||||||||||||||||||||||| |||||||||||||  |||||||||    
T  29568605 taaggacaatgcataatatatgtaaggtccgaggttcgaaccccagacaccac 29568657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 34595986 - 34595926
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| |||||||||||||||||||| ||||| |||| |||||  |||||||||    
T  34595986 tcagttggtaaggacaatgcataatatatgtaaagttcggggtttgaaccccagacaccac 34595926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 7190498 - 7190447
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacctt 364  Q
    ||||||||||||||||||||||||||||||||| || ||  |||||||||||    
T  7190498 tcagttggtaagaacaatgcataatatatgtaacgtccggagttcgaacctt 7190447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 50668349 - 50668400
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  50668349 attcagttggtatgaacaatacataatatatgtaaggttcggggttcaaacc 50668400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 1657074 - 1657020
Alignment:
Q  319 ggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||| |||||||||||||||||||||||| | ||||||||||  |||||||||    
T  1657074 ggtaaggacaatgcataatatatgtaaggtttggggttcgaacccaagacaccac 1657020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 51465346 - 51465396
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||||| | |||||||||||||||||||||| ||| |||||||||    
T  51465346 attcagttggtatggacaatgcataatatatgtaagggtcggggttcgaac 51465396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 1701635 - 1701680
Alignment:
Q  328 aatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||    
T  1701635 aatgcataatatatgcaaggtccgaggttcgaacctcagacaccac 1701680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 3936638 - 3936687
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||||||||||||||||||| ||||| || ||||||||||    
T  3936638 tcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaacc 3936687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 34960207 - 34960158
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||  ||||||||||||||||| |||| |||||||||||||||    
T  34960207 tcagttggtataaacaatgcataatatatataagattcgaggttcgaacc 34960158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 50380888 - 50380851
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||| |||||||||||||||||||||||||    
T  50380888 attcagttggtatgaacaatgcataatatatgtaaggt 50380851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 56551642 - 56551593
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||| ||||    
T  56551642 tcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaacc 56551593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 685046 - 684994
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||||| |||||||||||| ||||||||||| | ||||||| |||||    
T  685046 attcagttggtatgaacaatgcatattatatgtaaggcttgaggttcaaacct 684994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 22411775 - 22411819
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||| | |||||||||||||||||||||||||| |||||    
T  22411775 tcagttggtatggacaatgcataatatatgtaaggttcggggttc 22411819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 23160051 - 23160095
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||| | ||||||||||||||||||||||| ||||||||    
T  23160051 tcagttggtagggacaatgcataatatatgtaaggtccgaggttc 23160095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 29808318 - 29808258
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||| |||| ||||||||||||||||| |||||  | |||||||||||| ||||||||    
T  29808318 tcagttgataaggacaatgcataatatatgcaaggtatggggttcgaaccttggacaccac 29808258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 39842062 - 39842018
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    ||||||| |||| |||||||||||||||||||||||| |||||||    
T  39842062 tcagttgataaggacaatgcataatatatgtaaggtttgaggttc 39842018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 43722776 - 43722836
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||| | ||||||||||||||||||||||| || ||||| |||| || |||||||    
T  43722776 tcagttggtatggacaatgcataatatatgtaaggtccggggttcaaaccctaaacaccac 43722836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 46434810 - 46434766
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    ||||||| |||| |||||||||||||||||||||||| |||||||    
T  46434810 tcagttgataaggacaatgcataatatatgtaaggtttgaggttc 46434766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 46676548 - 46676488
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||||| ||  |||||||||    
T  46676548 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcgacccccagacaccac 46676488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 49473657 - 49473705
Alignment:
Q  314 cagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  49473657 cagttggtaaggacaatgcataatatatgcaaggtccggggttcgaacc 49473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 56096215 - 56096259
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    ||||||| |||| |||||||||||||||||||||||||| |||||    
T  56096215 tcagttgataaggacaatgcataatatatgtaaggttcgtggttc 56096259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 17656843 - 17656797
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||||    
T  17656843 tcagttggtatggacaatgcataatatatgtaaggttc-aggttcgaa 17656797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 32923247 - 32923204
Alignment:
Q  319 ggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||    
T  32923247 ggtatgaacaatgcataatatatgtaaggttcggggttcaaacc 32923204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 32923280 - 32923245
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||| |||||||||||||||||||||||||    
T  32923280 tcagttggtatgaacaatgcataatatatgtaaggt 32923245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 363
Target Start/End: Complemental strand, 34968044 - 34968009
Alignment:
Q  328 aatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||||||||||||||| |||||||||||||    
T  34968044 aatgcataatatatgtaaggtttgaggttcgaacct 34968009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 44221456 - 44221507
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| | ||||||||||||||||| |||||  ||||||||||||    
T  44221456 attcagttggtatggacaatgcataatatatgcaaggtctgaggttcgaacc 44221507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 360
Target Start/End: Complemental strand, 45029651 - 45029608
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||| |||||||||||||||||||||||| | ||||||||    
T  45029651 ttggtaaggacaatgcataatatatgtaaggtttggggttcgaa 45029608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 47704593 - 47704636
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggtt 356  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||    
T  47704593 tcagttggtatgaataatgtataatatatgtaaggttcgaggtt 47704636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 7230291 - 7230341
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||| |||||    
T  7230291 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaacct 7230341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 32200829 - 32200791
Alignment:
Q  335 aatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  32200829 aatatatgcaaggttcggggttcgaaccttagacaccac 32200791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 48223578 - 48223628
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    ||||||||||||||||||||||||||||| |||  | |||||||| |||||    
T  48223578 tcagttggtaagaacaatgcataatatatttaaaatccgaggttcaaacct 48223628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 346
Target Start/End: Complemental strand, 50937599 - 50937565
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaag 346  Q
    |||||||||||||||||| ||||||||||||||||    
T  50937599 ttcagttggtaagaacaaagcataatatatgtaag 50937565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 3299144 - 3299095
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||| | |||||||||||||||||| |||||| ||||||| ||||    
T  3299144 tcagttggttaaaacaatgcataatatatgcaaggtttgaggttcaaacc 3299095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 12058330 - 12058379
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||| |||||| | ||||||||||||||| ||||||| |||||||||||    
T  12058330 tcagtcggtaaggataatgcataatatatgcaaggttcaaggttcgaacc 12058379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 18004476 - 18004509
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaag 346  Q
    |||||||||||||| |||||||||||||||||||    
T  18004476 tcagttggtaagaataatgcataatatatgtaag 18004509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 22164317 - 22164284
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||| |||||||||||||||||||||||||    
T  22164317 agttggtaggaacaatgcataatatatgtaaggt 22164284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 25978335 - 25978388
Alignment:
Q  320 gtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||| ||||||||||||||||| ||||| ||||||||||| |  |||||||||    
T  25978335 gtaaggacaatgcataatatatgcaaggtccgaggttcgaatcccagacaccac 25978388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 26315789 - 26315834
Alignment:
Q  328 aatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||||||||||  ||||||||| ||||||||| ||||||||||    
T  26315789 aatgcataatatatacaaggttcgatgttcgaaccctagacaccac 26315834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 28435298 - 28435249
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||| |||||||| ||||| ||||    
T  28435298 tcagttggtatggacaatgcataatatatgcaaggttcggggttcaaacc 28435249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 40071018 - 40070969
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||||||||||||||||||| ||||| ||| |||| ||||    
T  40071018 tcagttggtatgaacaatgcataatatatgcaaggtccgaagttcaaacc 40070969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 42756156 - 42756099
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacac 370  Q
    ||||||| |||| ||||||||||||||||| |||||||| | |||||| || ||||||    
T  42756156 tcagttgataaggacaatgcataatatatgcaaggttcgggattcgaatctaagacac 42756099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 44527279 - 44527355
Alignment:
Q  31 gaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtag 108  Q
    ||||||||||||  ||||| |||||||||||||| | | |||  ||||||| ||||| ||||||||||||||| ||||    
T  44527279 gaggtccaatttg-ccaatgtatgatgttcattgaatatctccttttagtggtttctataagcttaatgttgatgtag 44527355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 342
Target Start/End: Original strand, 44689503 - 44689532
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatg 342  Q
    ||||||||||||||||||||||||||||||    
T  44689503 tcagttggtaagaacaatgcataatatatg 44689532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 51436656 - 51436607
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| || ||||||||||||||||||| ||||||||  |||||||||    
T  51436656 tcagttgatacgaacaatgcataatatatgcaaggttcggagttcgaacc 51436607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 1e-46; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 28 - 207
Target Start/End: Complemental strand, 11790923 - 11790744
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||| ||||| ||||||||||||||| | |||||||  ||||||| ||||    
T  11790923 gtggaggtccaattttgccaatatctgatgttcattggacacctccttttagtggtttctataagcttaatgttgatgcagcagatctgatagagggtga 11790824  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattac 207  Q
    ||| |||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||   ||||||| || ||||||||    
T  11790823 taagtggggtattggtgttgcggtgagagataatgaaggtgttatcgttggtgctagtttctggcaagtcttttcattac 11790744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 14069317 - 14069160
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||| || || ||||||||||||||| | ||||| | |||||||  ||||    
T  14069317 gtggaggtccaattttgccaatatctgatgttcattggacacctccttttagtggttcctataagcttaatgttgatgcagcaggtccgatagaaggtga 14069218  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    ||| ||||  ||||| ||||| |||||||||||||||| |||||||||||||| ||||    
T  14069217 taagtggggcattggggttgttgtgagagataatgaaggtgttgtcgttggtgttagt 14069160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 14379345 - 14379188
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||  ||||||| || || ||||||||||||||| | ||||| | |||||||  ||||    
T  14379345 gtggaggtccaattttgccaatatctgatgttcattggacacctccttttagtggttcctataagcttaatgttgatgcagcaggtccgatagaaggtga 14379246  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    ||| ||||  ||||| ||||| |||||||||||||||| |||||||||||||| ||||    
T  14379245 taagtggggcattggggttgttgtgagagataatgaaggtgttgtcgttggtgttagt 14379188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 30 - 195
Target Start/End: Complemental strand, 9112213 - 9112048
Alignment:
Q  30 ggaggtccaattttaccaatatatgatgttcattggac-acctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtgat 128  Q
    |||||||||| |||| | |||| | ||||||||||||| ||| || || |||| ||||| |||| | |||||||| | |||||  ||||| ||| | |||    
T  9112213 ggaggtccaaatttaaccatatctaatgttcattggacgacccctatt-agtggtttctataagttaaatgttgatgcagcaggctcgatcgagggggat 9112115  T
Q  129 aaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaag 195  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||| |||||||||    
T  9112114 aaatggggtattggtgttgttgtgagagataatgaaggtgttgtcgttgctgctagttgttggcaag 9112048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 25616744 - 25616562
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||| ||||||| ||||||| |||||| |||||||||||||  ||||||| ||||| |||||||||||||||   || || |  ||| ||   |||    
T  25616744 gtggaggttcaattttgccaatatctgatgtacattggacacctccttttagtggtttctataagcttaatgttgatacagtaggtctgatggaagatga 25616645  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattaccaga 211  Q
    ||| |||| ||||||| |||| |||||||||||||||| ||||||| ||||||||||    ||||||| || ||||||||||||    
T  25616644 taagtggggtattggtattgt-gtgagagataatgaaggtgttgtccttggtgctagctcctggcaagtcttttcattaccaga 25616562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 38553829 - 38553879
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  38553829 tcagttggtaagaacaatgcataatatatgtaaggtttggggttcgaacct 38553879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 10236955 - 10236906
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  10236955 tcagttggtaagaacaatgcataatgtatgcaaggttcgaggttcgaacc 10236906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 7908603 - 7908653
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||| | ||||||||||| |||||||||||||| ||||||||||    
T  7908603 ttcagttggtatggacaatgcataaaatatgtaaggttcggggttcgaacc 7908653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 29237607 - 29237557
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||||||||||||||||||||||| ||||| |  |||||||||||    
T  29237607 tcagttggtaagaacaatgcataatatatgcaaggtccagggttcgaacct 29237557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 32513219 - 32513169
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||| ||||||| |||||| |||||||||| ||||||||||||||||||||    
T  32513219 tcagctggtaagtacaatgtataatatatgcaaggttcgaggttcgaacct 32513169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 34722071 - 34722021
Alignment:
Q  313 tcagttggtaagaacaatgcataat-atatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||||||    
T  34722071 tcagttggtatgaacaatgcataataatatgtaaggtccgaggttcgaacc 34722021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 9522923 - 9522972
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||||||||||||||||||| |||||| | ||||||||||    
T  9522923 tcagttggtatgaacaatgcataatatatgcaaggtttggggttcgaacc 9522972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 21105614 - 21105663
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | | ||||||||||||||| |||||||||||||||||||    
T  21105614 tcagttggtatggaaaatgcataatatatgcaaggttcgaggttcgaacc 21105663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 27833451 - 27833402
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||||||||| || ||||| ||||    
T  27833451 tcagttggtaaggacaatgcataatatatgtaaggtccggggttcaaacc 27833402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 42227848 - 42227811
Alignment:
Q  320 gtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  42227848 gtaaggacaatgcataatatatgtaaggttcgaggttc 42227811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 46987097 - 46987146
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  46987097 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaacc 46987146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 2618690 - 2618750
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| ||||| || |||||||| || | |||||||    
T  2618690 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatctcatacaccac 2618750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 39049684 - 39049732
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||||| ||||||||||||||||||||||| || | |||||||    
T  39049684 tcagttggtaagcacaatgcataatatatgtaaggtccgggtttcgaac 39049732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 39280868 - 39280824
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||||||||||||||||||||| ||||| || |||||    
T  39280868 tcagttggtaagaacaatgcataatatatgcaaggtccggggttc 39280824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 15015252 - 15015287
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    ||||||| ||||||||||||||||||||||||||||    
T  15015252 tcagttgataagaacaatgcataatatatgtaaggt 15015287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 22327689 - 22327724
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||| |||||||||||||||||||||||||||||    
T  22327689 tcagttcgtaagaacaatgcataatatatgtaaggt 22327724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 27270246 - 27270305
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacacca 372  Q
    |||||||||| | ||||||||||||||||| ||||||||  |||||||||| || |||||    
T  27270246 tcagttggtatggacaatgcataatatatgcaaggttcggagttcgaacctcagccacca 27270305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 41619443 - 41619396
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||| |||||||| |||||||||||||| |||||| ||||||||    
T  41619443 agttggtaggaacaatgtataatatatgtaagattcgagattcgaacc 41619396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 3536304 - 3536266
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  3536304 tcagttggttggaacaatgcataatatatgtaaggttcg 3536266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 349
Target Start/End: Complemental strand, 23374682 - 23374644
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggtt 349  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  23374682 attctgttggtaagaataatgcataatatatgtaaggtt 23374644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 24226031 - 24225981
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||| ||| | ||||||||||| ||||||||||| ||||||||||||||    
T  24226031 tcagttcgtatggacaatgcataaaatatgtaaggtccgaggttcgaacct 24225981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 27158937 - 27158887
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    ||||||||||||||||||| |||||||||| || ||| ||||||| |||||    
T  27158937 tcagttggtaagaacaatgaataatatatgcaaagtttgaggttcaaacct 27158887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 346
Target Start/End: Complemental strand, 31885996 - 31885962
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaag 346  Q
    ||||||||||| |||||||||||||||||||||||    
T  31885996 ttcagttggtatgaacaatgcataatatatgtaag 31885962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 2391018 - 2391067
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||||||||||||  ||| | || ||||||||||    
T  2391018 tcagttggtaagaacaatgcataatatatacaagatccggggttcgaacc 2391067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 318 - 351
Target Start/End: Original strand, 2756256 - 2756289
Alignment:
Q  318 tggtaagaacaatgcataatatatgtaaggttcg 351  Q
    ||||||||||||||||| ||||||||||||||||    
T  2756256 tggtaagaacaatgcattatatatgtaaggttcg 2756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 341
Target Start/End: Original strand, 4335966 - 4335995
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatat 341  Q
    ||||||||||||||||||||||||||||||    
T  4335966 ttcagttggtaagaacaatgcataatatat 4335995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 342
Target Start/End: Original strand, 4398337 - 4398366
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatg 342  Q
    ||||||||||||||||||||||||||||||    
T  4398337 tcagttggtaagaacaatgcataatatatg 4398366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 7872798 - 7872749
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| |||||  | ||||||||||    
T  7872798 tcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaacc 7872749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 18714459 - 18714508
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||| ||||    
T  18714459 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaacc 18714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 22690086 - 22690037
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| |||||| ||||||||||||||| |||||| | ||||||||||    
T  22690086 tcagttgctaagaataatgcataatatatgcaaggtttggggttcgaacc 22690037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 24099273 - 24099236
Alignment:
Q  325 aacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  24099273 aacaatgcataatatatgtaaggttcggggtttgaacc 24099236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 27263352 - 27263401
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||| ||||||||  |||||||||    
T  27263352 tcagttggtatggacaatgcataatatatgcaaggttcggagttcgaacc 27263401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 38139568 - 38139617
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    ||||||| ||| ||||||||||| | |||||||||||||| |||||||||    
T  38139568 ttcagttagtatgaacaatgcatgagatatgtaaggttcggggttcgaac 38139617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 40890233 - 40890295
Alignment:
Q  313 tcagttggtaagaacaatgc---ataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| |||||||   |||||||||||||||||| ||||||||| || |||||||||    
T  40890233 tcagttggtaaggacaatgcataataatatatgtaaggttc-aggttcgaatctcagacaccac 40890295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 43539154 - 43539105
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| || ||||||||||||||||||||||||| || ||||| ||||    
T  43539154 tcagttgataggaacaatgcataatatatgtaaggtccggggttcaaacc 43539105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 3e-38; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 19237434 - 19237591
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||  ||||||| ||| | ||||||||| ||||| | | || || |||||||| ||||    
T  19237434 gtggaggttcaattttgccaatatctgatgttcattggacacctccttttagtggtttttataagcttaacgttgatgcaacatatccgatagagggtga 19237533  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    ||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  19237534 taagtggggtattggtgttgcggtgagagataatgaaggtgttgtcgttggtgctagt 19237591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 19310618 - 19310775
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||  ||||||| ||| | ||||||||| ||||| | | || || |||||||| ||||    
T  19310618 gtggaggttcaattttgccaatatctgatgttcattggacacctccttttagtggtttttataagcttaacgttgatgcaacatatccgatagagggtga 19310717  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    ||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  19310718 taagtggggtattggtgttgcggtgagagataatgaaggtgttgtcgttggtgctagt 19310775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 8969962 - 8970119
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    ||||| ||||||||||  |||||| ||||||||||||||||||||| ||||||| ||| | |||| |||||||||| | ||||| |  ||||||  ||||    
T  8969962 gtggaagtccaattttgtcaatatgtgatgttcattggacacctctttttagtggtttttataagtttaatgttgatgcagcaggtctgatagaaggtga 8970061  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    ||| |||| ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  8970062 taagtggggtattggtgttgtggtgagagataatgaaggtgttgtcgttggtgttagt 8970119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 16436090 - 16435933
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    |||||||||||||||| ||||||| ||||||||||| || |||||  ||||||| ||||| ||||||||||| ||| | ||||  |  ||||||| ||||    
T  16436090 gtggaggtccaattttgccaatatttgatgttcattagatacctccttttagtggtttctataagcttaatgctgatgcagcaagtctgatagagggtga 16435991  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    ||| |||| || |||||||||||||||||||||||||| |||||||||||||||||||    
T  16435990 taagtggggtagtggtgttgtggtgagagataatgaaggtgttgtcgttggtgctagt 16435933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 9492947 - 9492767
Alignment:
Q  31 gaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtgataa 130  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||  ||||||| ||||| |||||| ||| |||| | ||||| | |||||||| |||||||    
T  9492947 gaggtccaattttgccaatatctgacgttcattggacacctccttttagtggtttctataagctaaatattgatgcagcaggtccgatagagggtgataa 9492848  T
Q  131 atgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattaccaga 211  Q
    | ||| ||||||||||||||||||||||||||||  ||||||| ||| |||||||   || |||| || ||||||||||||    
T  9492847 agggggtattggtgttgtggtgagagataatgaaagtgttgtccttgatgctagttcctgacaagtcttttcattaccaga 9492767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 36919322 - 36919382
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |||||||    
T  36919322 tcagttggtaagaacaatgtataatatatgtaaggttcaaggttcgaacattaaacaccac 36919382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 9070969 - 9071029
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||||| | |||||||||    
T  9070969 tcagttggtaaggacaatgtataatatatgtaaggtccgaggttcgaacttcagacaccac 9071029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 3102328 - 3102379
Alignment:
Q  322 aagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  3102328 aagaacaatgtataatatatgtaaggtttgaggttcgaacctcagacaccac 3102379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 13477913 - 13477970
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacacca 372  Q
    |||||||||| ||||||||||||||||| || ||||||||||||| ||||||| ||||    
T  13477913 agttggtaaggacaatgcataatatatgcaatgttcgaggttcgatccttagatacca 13477970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 44019560 - 44019609
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  44019560 tcagttggtaagaacaatgcataatatatgcaaggtccgaagttcgaacc 44019609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 1230711 - 1230667
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||| |||||||||||||||||||||||||| |||||||    
T  1230711 tcagttggtaggaacaatgcataatatatgtaaggtttgaggttc 1230667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 19778076 - 19778136
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| ||||| || |||||||| | ||||||||||    
T  19778076 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaatcctagacaccac 19778136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 32878672 - 32878732
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||| | |||| |||||    
T  32878672 tcagttggtaagaacaatgcataatatatgcgaggttcgaggtttgaagcctagataccac 32878732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 33445581 - 33445641
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||| ||||||||||||||||||  |||||| ||| ||||||||| |||||||||    
T  33445581 tcagttggtaggaacaatgcataatatatacaaggtttgagattcgaacctcagacaccac 33445641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 44146742 - 44146781
Alignment:
Q  321 taagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  44146742 taagaacaatgcataatatatgcaaggttcgaggttcgaa 44146781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 8078146 - 8078100
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||    
T  8078146 ttggtaagaacaatgcataatatatgtaaggtctgatgttcgaacct 8078100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 42208519 - 42208469
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||| |||||    
T  42208519 tcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaacct 42208469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 9656047 - 9655998
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||| ||||| ||||| |||||||||||||    
T  9656047 tcagttggtaaggacaatgcataaaatatgcaaggtccgaggttcgaacc 9655998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 4830018 - 4830066
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||||||| | ||||||||||||||||| |||||||| ||||||||    
T  4830018 ttcagttggtatggacaatgcataatatatgcaaggttcggggttcgaa 4830066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 10320507 - 10320554
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||| |||||| |||||||||||||||||||||  ||||||||||    
T  10320507 tcagttgataagaataatgcataatatatgtaaggtatgaggttcgaa 10320554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 21557444 - 21557491
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||| ||| | ||||||||||||||||||||||| |||||||||||    
T  21557444 tcagttagtatggacaatgcataatatatgtaaggtccgaggttcgaa 21557491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 32192907 - 32192954
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||| | ||||||||||||||||| |||||||| ||||||||||    
T  32192907 agttggtatggacaatgcataatatatgcaaggttcggggttcgaacc 32192954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 38311879 - 38311958
Alignment:
Q  132 tgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattaccaga 211  Q
    |||| |||||||||||| || |||||| |||||| | |||| |||| ||||||| |||| |||| || ||||||||||||    
T  38311879 tggggtattggtgttgttgtaagagattatgaaggtattgtggttgctgctagttgttgtcaagtcttttcattaccaga 38311958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 38489252 - 38489205
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||| |||||||||||||| ||||||| |||||||| ||||||||    
T  38489252 tcagttgataagaacaatgcatgatatatgcaaggttcggggttcgaa 38489205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 39774950 - 39774997
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||||||||||| || ||||| |||||||||||| ||||||||||    
T  39774950 tcagttggtaagaacgatacataaaatatgtaaggtttgaggttcgaa 39774997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 43073486 - 43073451
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43073486 tcagttggtaaaaacaatgcataatatatgtaaggt 43073451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 351
Target Start/End: Original strand, 8020321 - 8020359
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  8020321 tcagttggtaggaacaacgcataatatatgtaaggttcg 8020359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 8717525 - 8717475
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||| | ||||||||||||||||| |||||||| ||||| |||||    
T  8717525 tcagttggtatggacaatgcataatatatgcaaggttcggggttcaaacct 8717475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 13105105 - 13105163
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacacc 371  Q
    |||||||||| | ||||||||||||||||| ||||  || ||||||||||| |||||||    
T  13105105 tcagttggtagggacaatgcataatatatgcaagggccggggttcgaacctcagacacc 13105163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 13357491 - 13357441
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||| | ||||||||||||||||| ||||| |||||||| |||||    
T  13357491 tcagttggtatggacaatgcataatatatgcaaggtacgaggttcaaacct 13357441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 708
Target Start/End: Complemental strand, 22931082 - 22930988
Alignment:
Q  615 tcacattttcttttcaaccaaactgcttatcataatatctttaatagttaatatag-aaattagttttgttacttctatgcgtataattttatat 708  Q
    ||||||||||||||| |||| ||   | || ||||||||||||||||||||  | | ||| ||||||||||||||||| || ||| |||||||||    
T  22931082 tcacattttcttttccaccataccaatcattataatatctttaatagttaagtttgcaaaatagttttgttacttctaagcctatgattttatat 22930988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 27750954 - 27750904
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||||| ||| ||||||||||||| ||||| || |||||||||||    
T  27750954 tcagttggtaaggacagtgcataatatatgcaaggtccggggttcgaacct 27750904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 29924965 - 29924907
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||| |||||||||||||||||||||| |||||||| ||||  ||||  |||||||||    
T  29924965 agttgttaagaacaatgcataatatatgcaaggttcggggtttaaaccccagacaccac 29924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 35102717 - 35102667
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    ||||||||||||  |||||||||||||||| ||| | ||||||||||||||    
T  35102717 tcagttggtaaggtcaatgcataatatatgcaagatccgaggttcgaacct 35102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 36588144 - 36588106
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  36588144 tcagttggtaggaacaatgtataatatatgtaaggttcg 36588106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 37141366 - 37141412
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||| | ||||||||||||||||| |||||||| |||||    
T  37141366 attcagttggtatggacaatgcataatatatgcaaggttcggggttc 37141412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 3650531 - 3650580
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||  || |||||||||||||||||||||||| ||||| ||||    
T  3650531 tcagttggtagaaaaaatgcataatatatgtaaggttcggggttcaaacc 3650580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 7968992 - 7968955
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  7968992 attcagttggtaaggacaatgcataatatatgcaaggt 7968955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 9241030 - 9241075
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||| ||||||||||||||||||||||| ||| |||| ||||    
T  9241030 ttggtaagtacaatgcataatatatgtaaggtccgatgttcaaacc 9241075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 10732821 - 10732776
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||| ||||||||||||||||||  ||||||| |||||||||||    
T  10732821 ttggtatgaacaatgcataatatatacaaggttcaaggttcgaacc 10732776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 11104775 - 11104824
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||||||||||||||||||  |||||||| | ||||||||    
T  11104775 tcagttggtaggaacaatgcataatatatacaaggttcgggattcgaacc 11104824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 342
Target Start/End: Original strand, 18533680 - 18533709
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatg 342  Q
    ||||||||||||||||||||||||||||||    
T  18533680 tcagttggtaagaacaatgcataatatatg 18533709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 20469361 - 20469312
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||  |||||||||||||||||| ||||||||  |||||||||    
T  20469361 tcagttggtataaacaatgcataatatatgcaaggttcggagttcgaacc 20469312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 27129093 - 27129150
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacac 370  Q
    |||||||||||||||| ||||||||||||| || ||||  | ||||||||| ||||||    
T  27129093 tcagttggtaagaacattgcataatatatgcaaagttcaggattcgaacctcagacac 27129150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 30623304 - 30623353
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| |||||  | ||||||||||    
T  30623304 tcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaacc 30623353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 370
Target Start/End: Original strand, 31888037 - 31888094
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacac 370  Q
    |||||||||||| |||||| |||||||||| ||||| |  | ||||||||||||||||    
T  31888037 tcagttggtaaggacaatggataatatatgcaaggtccatgattcgaaccttagacac 31888094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 32115443 - 32115406
Alignment:
Q  326 acaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  32115443 acaatgcataatatatgtaaggttcggggttcaaacct 32115406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 38282889 - 38282840
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| |||||||||| |||||  ||||| |||||||||||||    
T  38282889 tcagttggtaaggacaatgcatagtatatacaaggtccgaggttcgaacc 38282840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 5e-37; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 32 - 211
Target Start/End: Complemental strand, 32402046 - 32401868
Alignment:
Q  32 aggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtgataaa 131  Q
    |||||||||||   |||||||||||||||||||| ||||||  ||||||  ||||| ||||||||||||||||| ||||| | |||| ||| |||||||     
T  32402046 aggtccaatttcgtcaatatatgatgttcattgg-cacctccttttagtagtttctataagcttaatgttgacgcagcaggtccgattgagggtgataag 32401948  T
Q  132 tgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattaccaga 211  Q
    |||| ||||||||||||||||||||||||||||| ||||||| || ||| ||||  |||||||| || ||||||||||||    
T  32401947 tggggtattggtgttgtggtgagagataatgaaggtgttgtccttagtgttagttcttggcaagtcttttcattaccaga 32401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 27214411 - 27214255
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatag-agagtg 126  Q
    |||||||||||||||| |   ||| |||||||||||| |||||||  |||||||  |||| ||||||||||||||| | ||||| | |||||| |||| |    
T  27214411 gtggaggtccaattttgcgggtatctgatgttcattgtacacctccttttagtggcttctataagcttaatgttgatgcagcaggtccgatagaagag-g 27214313  T
Q  127 ataaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctag 184  Q
     ||| |||| ||||||||||||||| ||||||||||||| ||||||||| | ||||||    
T  27214312 gtaagtggggtattggtgttgtggtaagagataatgaaggtgttgtcgtagctgctag 27214255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 18981234 - 18981192
Alignment:
Q  318 tggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  18981234 tggtaagaacaatgcataatatatgtaaggttcggggttcgaa 18981192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 4719282 - 4719225
Alignment:
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    ||||| || |||||||||||||| |||||||||||||||||||||| || ||||||||    
T  4719282 taaatagggtattggtgttgtggcgagagataatgaagatgttgtcatttgtgctagt 4719225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 21657449 - 21657388
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||| ||| | |||||||||||||||||||||||| ||||||| ||||| |||||||||    
T  21657449 ttcagtttgtagggacaatgcataatatatgtaaggtttgaggttcaaacctcagacaccac 21657388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 9123895 - 9123835
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||  ||||||||||||||||||||| | ||| |||||||||| |||||||||    
T  9123895 tcagttggtaaagacaatgcataatatatgtaagatccgaagttcgaacctcagacaccac 9123835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 43108580 - 43108640
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| |||||||  |||||||| ||| ||||||||    
T  43108580 tcagttggtaaggacaatgcataatatatgcaaggttcagggttcgaatcttggacaccac 43108640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 319 - 370
Target Start/End: Complemental strand, 2951411 - 2951361
Alignment:
Q  319 ggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacac 370  Q
    |||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  2951411 ggtaaggacaatgcataatatatgtaaggtt-gaggttcgaaccctagacac 2951361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 24438558 - 24438593
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    ||||||||||||||||||||||||||||||||||||    
T  24438558 tcagttggtaagaacaatgcataatatatgtaaggt 24438593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 18391611 - 18391661
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||||| ||||||||||| ||||| ||||| ||||||||||||||    
T  18391611 tcagttggtaaggacaatgcataaaatatgcaaggtccgaggttcgaacct 18391661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 5107295 - 5107246
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||| ||||||||||||||| ||||| |||||||||||||    
T  5107295 tcagttggtatgaataatgcataatatatgcaaggtccgaggttcgaacc 5107246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 12909216 - 12909179
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttc 350  Q
    |||||||||| |||||||||||||||||||||||||||    
T  12909216 tcagttggtatgaacaatgcataatatatgtaaggttc 12909179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 22745904 - 22745949
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||    
T  22745904 ttggtaaggataatgcataatatatgtaaggtacgaggttcgaacc 22745949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 26409264 - 26409313
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||||||||| || ||||||||||    
T  26409264 tcagttggtatggacaatgcataatatatgtaaggtccggggttcgaacc 26409313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 26655475 - 26655524
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||||||||| || ||||||||||    
T  26655475 tcagttggtatggacaatgcataatatatgtaaggtccggggttcgaacc 26655524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 26927060 - 26927109
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||||||||| || ||||||||||    
T  26927060 tcagttggtatggacaatgcataatatatgtaaggtccggggttcgaacc 26927109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 27903123 - 27903168
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||    
T  27903123 ttcagttggtatgaacaatgcataatatatgcaaggttcggggttc 27903168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 31602875 - 31602826
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||| ||||    
T  31602875 tcagttggtatgaacaatgcataatatatgcaaggttcgagattcaaacc 31602826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 36162941 - 36162904
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||| |||||||||||||||||||||||||    
T  36162941 attcagttggtatgaacaatgcataatatatgtaaggt 36162904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 39143725 - 39143774
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||| |||||||||||||||||||| ||||||||||||    
T  39143725 tcagttggtatggacattgcataatatatgtaaggtttgaggttcgaacc 39143774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 2705566 - 2705518
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    ||||||| |||||||||| |||||||||||||||||  |||||||||||    
T  2705566 tcagttgataagaacaatacataatatatgtaaggtctgaggttcgaac 2705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 13547462 - 13547506
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||| | |||||||||| |||||||||||||||||||||||    
T  13547462 ttggtaaggataatgcataatgtatgtaaggttcgaggttcgaac 13547506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 16752553 - 16752505
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||||||||| ||||||||||||||||| ||| |||| ||||||||    
T  16752553 ttcagttggtaaggacaatgcataatatatgcaagattcggggttcgaa 16752505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 23118101 - 23118053
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    ||||||| |||| |||||||||||||||||||||||| | |||||||||    
T  23118101 tcagttgataaggacaatgcataatatatgtaaggtttggggttcgaac 23118053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 26034658 - 26034598
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||| ||||||||||||||||||| |||||||| || ||||| | ||| ||||||    
T  26034658 tcagttggtatgaacaatgcataatatatgaaaggttcgtggatcgaaacctagccaccac 26034598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 315 - 351
Target Start/End: Complemental strand, 27651578 - 27651542
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||| ||||||||||||||||||||||||||    
T  27651578 agttggtaaggacaatgcataatatatgtaaggttcg 27651542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 31708196 - 31708136
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||| ||||||||||||||||||| |||||  | |||||||||||  ||||||||    
T  31708196 tcagttggtatgaacaatgcataatatatgcaaggtctggggttcgaacctcggacaccac 31708136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 35807793 - 35807742
Alignment:
Q  313 tcagttggtaagaacaatg--cataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  35807793 tcagttggtaagaacaatgtgcataatatatgcaaggtttgaggttcgaacc 35807742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 11647208 - 11647255
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||| ||||||||||||||||| |||||| | ||||||||    
T  11647208 tcagttggtaaggacaatgcataatatatgcaaggtttggggttcgaa 11647255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 18278309 - 18278274
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||||||||||||||||||||| |||||    
T  18278309 tcagttggtaagaacaatgcataatatatgcaaggt 18278274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 31545882 - 31545933
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacctt 364  Q
    ||||||||| || | ||||||||||||||| ||||||| |||||||||||||    
T  31545882 tcagttggttaggataatgcataatatatgcaaggttcaaggttcgaacctt 31545933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 34702501 - 34702548
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  34702501 tcagttggtaaggacaatgcataatatatgaaaggtccggggttcgaa 34702548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 6894107 - 6894157
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||| |||||||||| || ||||| |||||||| |||||||||||    
T  6894107 tcagttggtatgaacaatgcaaaaaatatgcaaggttcggggttcgaacct 6894157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 15105160 - 15105114
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcga 359  Q
    ||||||||||| ||||||||||||||||| ||||||| | |||||||    
T  15105160 tcagttggtaaaaacaatgcataatatatataaggtttggggttcga 15105114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 42854357 - 42854323
Alignment:
Q  326 acaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||||| ||||||||||    
T  42854357 acaatgcataatatatgtaaggtttgaggttcgaa 42854323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 342
Target Start/End: Complemental strand, 1669630 - 1669601
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatg 342  Q
    ||||||||||||||||||||||||||||||    
T  1669630 tcagttggtaagaacaatgcataatatatg 1669601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 3955556 - 3955617
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||| |||||||  |||||||||||||||||||| ||||| |||||||| |  |||||||||    
T  3955556 ttcaattggtaaagacaatgcataatatatgtaatgttcggggttcgaatcccagacaccac 3955617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 11637622 - 11637573
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||| ||||| |||||||| ||||||||||    
T  11637622 tcagttggtatggacaatgcataaaatatgcaaggttcggggttcgaacc 11637573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 16193117 - 16193154
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggtt 349  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  16193117 ttcagttggtatgaacaatgcataaaatatgtaaggtt 16193154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 16579424 - 16579375
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||||||||||||||||||| ||||| || ||||| ||||    
T  16579424 tcagttggtatgaacaatgcataatatatgcaaggtccgtggttcaaacc 16579375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 25709743 - 25709792
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||| ||| |||||||||||||||||| ||||| ||||||| ||||    
T  25709743 ttcagttgataaaaacaatgcataatatatgcaaggtccgaggtttgaac 25709792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 29695026 - 29695075
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| || | |||||||||||||||||||||||||| ||||| ||||    
T  29695026 tcagttgatatggacaatgcataatatatgtaaggttcgtggttcaaacc 29695075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 29904431 - 29904476
Alignment:
Q  313 tcagttggt-aagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  29904431 tcagttggttaaggacaatacataatatatgtaaggttcgaggttc 29904476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 37073802 - 37073769
Alignment:
Q  329 atgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||||||||||||| ||||||||||    
T  37073802 atgcataatatatgtaaggttcggggttcgaacc 37073769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 37791214 - 37791169
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||  ||||| |||||||||||| ||||||||||||||    
T  37791214 ttcagttggtagaaacaacgcataatatatgcaaggttcgaggttc 37791169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 37932341 - 37932390
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||| ||||| || ||||||||||    
T  37932341 tcagttggtatggacaatgcataatatatgcaaggtccggggttcgaacc 37932390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 342
Target Start/End: Complemental strand, 39917934 - 39917905
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatg 342  Q
    ||||||||||||||||||||||||||||||    
T  39917934 tcagttggtaagaacaatgcataatatatg 39917905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 311 - 348
Target Start/End: Original strand, 42515816 - 42515853
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||| | |||||||||||||||||||||||    
T  42515816 attcagttggtatggacaatgcataatatatgtaaggt 42515853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 10173 - 10023
Alignment:
Q  35 tccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtgataaatgg 134  Q
    ||||||||  ||||||| ||||||||||| ||||||||| ||||||| ||| | ||||||||||||||| ||||||  | ||||| || ||||||| |||    
T  10173 tccaatttagccaatatctgatgttcatttgacacctctttttagtggtttttataagcttaatgttgatgtagcacgtccgataaagggtgataagtgg 10074  T
Q  135 gatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagt 185  Q
    | |||  |||||||||||||||||||||||| ||||||||| |||||||||    
T  10073 ggtatcagtgttgtggtgagagataatgaaggtgttgtcgtcggtgctagt 10023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 5e-31; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 17538705 - 17538854
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtga 127  Q
    ||||||||| ||||||   ||||| ||||||||||| ||||||||  ||||||| ||||| ||||||||||||||| | ||||  |||||||||| | ||    
T  17538705 gtggaggtcaaattttgttaatatctgatgttcatttgacacctccttttagtggtttctataagcttaatgttgatggagcatgttcgatagaggggga 17538804  T
Q  128 taaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttg 177  Q
    ||| |||||||||| |||||||||||||||| |||||| |||||||||||    
T  17538805 taagtgggatattgatgttgtggtgagagatgatgaaggtgttgtcgttg 17538854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 26024532 - 26024718
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctg---tttagtgatttctttaagcttaatgttgacgtagcagattcgatagagag 124  Q
    ||||||||||| |||| ||||||| | ||||||||||||||||||     ||||||| ||||| ||||||| ||||||| | ||||| | |||||||  |    
T  26024532 gtggaggtccagttttgccaatatctaatgttcattggacacctcctccatttagtggtttctataagcttgatgttgatgcagcaggtccgatagaagg 26024631  T
Q  125 tgataaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcattaccaga 211  Q
    |||| | |||| ||||||||||||  ||||||||||||||| |||||||||||||| | ||   ||||||| || ||||||||||||    
T  26024632 tgatgagtggggtattggtgttgttttgagagataatgaaggtgttgtcgttggtgttggttcctggcaagtctcttcattaccaga 26024718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 5953675 - 5953598
Alignment:
Q  28 gtggaggtccaattttaccaatatatgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacg 105  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||  ||||||| ||| | |||||| ||||||||||    
T  5953675 gtggaggtccaattttaccaatatttgatgttcatatgacacctccttttagtggtttttataagctcaatgttgacg 5953598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 37320567 - 37320507
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  37320567 tcagttggtaaagacaatgcataatatatgcaaggttcgaggttcgaaccatggacaccac 37320507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 23496863 - 23496975
Alignment:
Q  89 taagcttaatgttgacgtagcagattcgatagagagtgataaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgt 188  Q
    ||||||||||||||| | || || |||||||||| ||||||| |||| ||||||||          ||||||||||| |||||||||||||||||||  |    
T  23496863 taagcttaatgttgatgcagtaggttcgatagagggtgataagtggggtattggtg----------agataatgaaggtgttgtcgttggtgctagttct 23496952  T
Q  189 tggcaagactgttcattaccaga 211  Q
    ||||||| || ||||||||||||    
T  23496953 tggcaagtcttttcattaccaga 23496975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 25274879 - 25274830
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  25274879 tcagttggtaagaacaatgcataatatatgtaaggtctggggttcgaacc 25274830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 12124556 - 12124616
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||||||||| | |||||||    
T  12124556 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaacctcaaacaccac 12124616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 21497681 - 21497721
Alignment:
Q  316 gttggtaagaacaatgcataatatatgtaaggttcgaggtt 356  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21497681 gttggtaagaacaatgcataatatatgcaaggttcgaggtt 21497721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 35727448 - 35727496
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||    
T  35727448 tcagttggtaagaacaatgcataatatatgcaaggtttggggttcgaac 35727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 312 - 351
Target Start/End: Original strand, 2429026 - 2429065
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  2429026 ttcagttggtaaggacaatgcataatatatgtaaggttcg 2429065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 312 - 351
Target Start/End: Complemental strand, 44488061 - 44488022
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44488061 ttcagttggtaaggacaatgcataatatatgtaaggttcg 44488022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 13196711 - 13196757
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcga 359  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||    
T  13196711 tcagttggtatgaacaatgcataatatatgcaaggttcggggttcga 13196757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 8542959 - 8543008
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||| ||| |||||||||||| |||||||||||||||||||| |||||    
T  8542959 tcagttagtaggaacaatgcatattatatgtaaggttcgaggtttgaacc 8543008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 20517033 - 20517066
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaag 346  Q
    ||||||||||||||||||||||||||||||||||    
T  20517033 tcagttggtaagaacaatgcataatatatgtaag 20517066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 22520227 - 22520288
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||| ||||||||||||||||||||||| ||||   ||||||| |||| ||||||||||    
T  22520227 ttcagttagtaagaacaatgcataatatatgcaaggcctgaggttcaaaccctagacaccac 22520288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 24593387 - 24593436
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||||||||    
T  24593387 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaacc 24593436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 2687424 - 2687365
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||||||||||||| ||||||| || ||||| |||||||||| | ||||||||    
T  2687424 tcagttggtaagaacaatgcattatatatgcaaagttcg-ggttcgaaccctggacaccac 2687365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 3196571 - 3196611
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgag 353  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  3196571 tcagttgatatgaacaatgcataatatatgtaaggttcgag 3196611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 4238770 - 4238818
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||| ||| | |||||||||||||||||||||||||| |||||||||    
T  4238770 tcagttagtatggacaatgcataatatatgtaaggttcggggttcgaac 4238818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 12124695 - 12124755
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| ||||| ||  |||||||||| | |||||||    
T  12124695 tcagttggtaaggacaatgcataatatatgcaaggtccggagttcgaacctcaaacaccac 12124755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 20120771 - 20120727
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||    
T  20120771 tcagttggtaaggacaatgcataatatatgcaaggttcggggttc 20120727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 25395492 - 25395448
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||    
T  25395492 tcagttggtaggaacaatgcataatatatgcaaggttcaaggttc 25395448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 43356583 - 43356543
Alignment:
Q  322 aagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  43356583 aagaacaatgcataatatatgcaaggtccgaggttcgaacc 43356543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 12893294 - 12893247
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||| ||||||||||| |||||||||||||||| | |||||||||    
T  12893294 tcagttgataagaacaatgtataatatatgtaaggtccaaggttcgaa 12893247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 16221396 - 16221349
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||| ||||||||||||| ||||| |||||||| ||||||||    
T  16221396 tcagttggtatgaacaatgcataaaatatgcaaggttcggggttcgaa 16221349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 23250370 - 23250335
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||||||||||||||||||||| |||||    
T  23250370 tcagttggtaagaacaatgcataatatatgcaaggt 23250335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 26133570 - 26133531
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcga 352  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  26133570 tcagttggtaaggacaatgcataatatatgcaaggttcga 26133531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 33966332 - 33966371
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcga 352  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  33966332 tcagttggtatgaacaatgcataatatatgcaaggttcga 33966371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 360
Target Start/End: Complemental strand, 34843563 - 34843517
Alignment:
Q  314 cagttggtaagaa-caatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  34843563 cagttggtaagaaacaatgcataatatatgtaaggttc-aggttcgaa 34843517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 40099433 - 40099387
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||    
T  40099433 tcagttggtaaggacaatgcataatatatgcaagg-tcgaggttcgaa 40099387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 10065486 - 10065544
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||| ||||||||||||||||| ||| |||  |||||||||| | ||||||||    
T  10065486 agttggtaaggacaatgcataatatatgcaagtttcagggttcgaaccctggacaccac 10065544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 315 - 361
Target Start/End: Original strand, 15612962 - 15613008
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||| ||||| ||||||||||||||| ||||||||||||||| ||||    
T  15612962 agtttgtaaggacaatgcataatatacgtaaggttcgaggtttgaac 15613008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 34903527 - 34903577
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||| ||| ||||||||||||| |||||  ||||||||||||    
T  34903527 ttcagttggtaaggacagtgcataatatatgcaaggtctgaggttcgaacc 34903577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 35456871 - 35456821
Alignment:
Q  313 tcagttggtaagaacaatgca-taatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||| ||||    
T  35456871 tcagttggtaagaacaatgcattaatatatgcaaggttcggggttcaaacc 35456821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 40967421 - 40967371
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    ||||||| |||| ||||||||||||||||| |||||| ||||||| |||||    
T  40967421 tcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacct 40967371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 145061 - 145024
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttc 350  Q
    |||||||||| | |||||||||||||||||||||||||    
T  145061 tcagttggtatggacaatgcataatatatgtaaggttc 145024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 2264823 - 2264868
Alignment:
Q  328 aatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||||||||||||| | |||||||||| | ||||||||    
T  2264823 aatgcataatatatgtaaggtttggggttcgaaccctggacaccac 2264868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 6579329 - 6579296
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||||||||||||||||||| |||||    
T  6579329 agttggtaagaacaatgcataatatatgcaaggt 6579296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 6765621 - 6765670
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||| ||||||||||| || ||||||||||    
T  6765621 tcagttggtatggacaatgcataaaatatgtaaggtccggggttcgaacc 6765670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 20644015 - 20644048
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaag 346  Q
    |||||||||||||| |||||||||||||||||||    
T  20644015 tcagttggtaagaataatgcataatatatgtaag 20644048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 24393256 - 24393305
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| |||| ||||||||||||||||| |||||  ||||||||||||    
T  24393256 tcagttgttaaggacaatgcataatatatgcaaggtctgaggttcgaacc 24393305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 24581055 - 24581018
Alignment:
Q  325 aacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  24581055 aacaatgcataatatatgcaaggttcgaggttcaaacc 24581018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 27935067 - 27935116
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | |||||||| |||||||| ||||| |||||||||||||    
T  27935067 tcagttggtagggacaatgcagaatatatgcaaggtacgaggttcgaacc 27935116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 28771593 - 28771642
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| ||| | || ||||||||||    
T  28771593 tcagttggtaaggacaatgcataatatatgcaagatccgcggttcgaacc 28771642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 316 - 349
Target Start/End: Complemental strand, 32957590 - 32957557
Alignment:
Q  316 gttggtaagaacaatgcataatatatgtaaggtt 349  Q
    ||||||| ||||||||||||||||||||||||||    
T  32957590 gttggtatgaacaatgcataatatatgtaaggtt 32957557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 43117240 - 43117191
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| |||||  ||||||| ||||    
T  43117240 tcagttggtaaggacaatgcataatatatgcaaggtctgaggttcaaacc 43117191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 1e-16; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 21015973 - 21016022
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21015973 tcagttggtaagaacaatgcataatatatgtaaggttcggggttcgaacc 21016022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 9413808 - 9413856
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9413808 ttcagttggtaagaacaatgcataatatatgtaaggttcggggttcgaa 9413856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 30795712 - 30795772
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||    
T  30795712 tcagttggtaagaacaatgcataatatatgcaaggtccaaggttcgaaccttaaacaccac 30795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 43542131 - 43542259
Alignment:
Q  83 tttctttaagcttaatgttgacgtagcagattcgatagagagtgataaatgggatattggtgttgtggtgagagataatgaagatgttgtcgttggtgct 182  Q
    ||||| |||||| |||||||| | ||||  | |||||||  ||||||| |||| |||| |  |||| |||||||||||||||| ||||||||||||||||    
T  43542131 tttctataagctgaatgttgatgcagcaagtccgatagaaggtgataagtggggtattaggattgttgtgagagataatgaaggtgttgtcgttggtgct 43542230  T
Q  183 agtcgttggcaagactgttcattaccaga 211  Q
    |||  |||||||  || ||||||||||||    
T  43542231 agtttttggcaaatcttttcattaccaga 43542259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 27023705 - 27023646
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||    
T  27023705 tcagttggtaagaacaatgcataatatatgcaaggttcg-ggttcaaacctcagacaccac 27023646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 17221568 - 17221521
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  17221568 agttggtaagaacaatgcataatatatgcaaggtccgaggttcgaacc 17221521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 34083348 - 34083397
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  34083348 tcagatggtaagaacaatgcataatatatgtaaggtttggggttcgaacc 34083397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 10132494 - 10132434
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| |||||  | |||||||||||| ||||||||    
T  10132494 tcagttggtaaggacaatgcataatatatgcaaggtctggggttcgaaccttggacaccac 10132434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 25271814 - 25271778
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||||||||||||||||||||||||||||    
T  25271814 ttcagttggtaagaacaatgcataatatatgtaaggt 25271778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 31438456 - 31438587
Alignment:
Q  53 tgatgttcattggacacctctgtttagtgatttctttaagcttaatgttgacgtagcagattcgatagagagtgataaatgggatattggtgttgtggtg 152  Q
    |||||||||||||||||||||||  |||| || || |||| | |||||||| | ||||  | ||| |||| | | |||||| | |||||||||||  |||    
T  31438456 tgatgttcattggacacctctgtc-agtggttgctataagttaaatgttgatgcagcatgtccgacagaggggggtaaatgaggtattggtgttgcagtg 31438554  T
Q  153 agagataatgaagatgttgtcgttggtgctagt 185  Q
    |||||||| |||| ||||||||||| |||||||    
T  31438555 agagataacgaaggtgttgtcgttgctgctagt 31438587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 35442866 - 35442918
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacctta 365  Q
    |||||||||| ||||||||||||||||||  ||||| ||||||||||||||||    
T  35442866 tcagttggtatgaacaatgcataatatattcaaggtccgaggttcgaacctta 35442918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 32826756 - 32826709
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcga 359  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||    
T  32826756 ttcagttggtaaaaataatgcataatatatgtaaggttcaaggttcga 32826709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 34808613 - 34808566
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||| |||| ||||||||||||||||| |||||||||||||||||    
T  34808613 tcagttgttaaggacaatgcataatatatgcaaggttcgaggttcgaa 34808566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 2613733 - 2613782
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||| |||||||||||||| ||||||||||    
T  2613733 tcagttggtatggacaatgcataaaatatgtaaggttcggggttcgaacc 2613782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 9398463 - 9398414
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||||| |||||||||||||  | ||||||||||    
T  9398463 tcagttggtaagaacaatgcatgatatatgtaaggtctggggttcgaacc 9398414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 33153930 - 33153881
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||||||||| |||||||| ||||    
T  33153930 tcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaacc 33153881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 369
Target Start/End: Complemental strand, 45652154 - 45652113
Alignment:
Q  328 aatgcataatatatgtaaggttcgaggttcgaaccttagaca 369  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  45652154 aatgcataatatatgtaaggtccgaggttcgaacctcagaca 45652113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 47528497 - 47528448
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||| | ||||| |||||||||||||    
T  47528497 tcagttggtaaggacaatgcataatatacgcaaggtccgaggttcgaacc 47528448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 2817423 - 2817379
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||| ||||||||||||||||||||||| ||| ||||    
T  2817423 tcagttggtaaggacaatgcataatatatgtaaggtccgaagttc 2817379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 3573374 - 3573338
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggtt 349  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3573374 tcagttggtaggaacaatgcataatatatgtaaggtt 3573338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 7652111 - 7652171
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacacca 372  Q
    ||||||||||| | ||||| |||||||||||||||||  || |||||||||| ||||||||    
T  7652111 ttcagttggtatggacaatacataatatatgtaaggtctgaagttcgaacctcagacacca 7652171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 17283962 - 17284022
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| ||||| |  |||||||||| | ||||||||    
T  17283962 tcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaaccctggacaccac 17284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 315 - 351
Target Start/End: Original strand, 22821069 - 22821105
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||||||||||||||||||||| ||||||||    
T  22821069 agttggtaagaacaatgcataatatatgcaaggttcg 22821105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 37045196 - 37045136
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||| ||||||||||||||||||| ||||| |  ||||||||||  |||||||||    
T  37045196 tcagttggtaggaacaatgcataatatatgcaaggtccagggttcgaaccccagacaccac 37045136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 1408446 - 1408493
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||| ||||||||||||||||| || |||||| |||||||    
T  1408446 tcagttggtaaggacaatgcataatatatgcaaagttcgaagttcgaa 1408493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 356
Target Start/End: Complemental strand, 24124880 - 24124837
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggtt 356  Q
    ||||||| |||| ||||||||||||||||| |||||||||||||    
T  24124880 tcagttgttaaggacaatgcataatatatgcaaggttcgaggtt 24124837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 361
Target Start/End: Complemental strand, 25942701 - 25942654
Alignment:
Q  314 cagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    ||||||||| ||||||||||||| |||| ||||||||| |||||||||    
T  25942701 cagttggtatgaacaatgcataaaatatataaggttcggggttcgaac 25942654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 30561736 - 30561783
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||||||||||| |||||   |||||||||||    
T  30561736 agttggtaagaacaatgcataatatatgcaaggtctaaggttcgaacc 30561783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 32874439 - 32874392
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||||||||  ||||||||||||||||||| ||||| ||||||||    
T  32874439 tcagttggtaagggcaatgcataatatatgtaaagttcggggttcgaa 32874392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 38448916 - 38448869
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  38448916 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaa 38448869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 41926833 - 41926868
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||| |||||||||||||||||||||||    
T  41926833 tcagttggtaaggacaatgcataatatatgtaaggt 41926868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 351
Target Start/End: Original strand, 42860125 - 42860156
Alignment:
Q  320 gtaagaacaatgcataatatatgtaaggttcg 351  Q
    ||||||||||||||||||||||||||||||||    
T  42860125 gtaagaacaatgcataatatatgtaaggttcg 42860156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 44243884 - 44243919
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||| |||||||||||||||||||||||||    
T  44243884 tcagttggtaggaacaatgcataatatatgtaaggt 44243919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 314 - 360
Target Start/End: Original strand, 12500935 - 12500981
Alignment:
Q  314 cagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    ||||||||||| ||||||||||||||||| || ||||| ||||||||    
T  12500935 cagttggtaaggacaatgcataatatatgcaaagttcggggttcgaa 12500981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 15262509 - 15262439
Alignment:
Q  136 atattggtgttgtggtgagagataatgaagatgttgtcgttggtgctagtcgttggcaagactgttcatta 206  Q
    |||||||||||| ||||||||||||||||| |||||| |||| || |||| | | ||||| || |||||||    
T  15262509 atattggtgttgcggtgagagataatgaaggtgttgttgttgctgttagttgcttgcaagtcttttcatta 15262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 45481502 - 45481552
Alignment:
Q  311 attcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    ||||| |||||||| ||||||||||||||||| ||||| || |||||||||    
T  45481502 attcatttggtaaggacaatgcataatatatgcaaggtccggggttcgaac 45481552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 48681983 - 48681945
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  48681983 tcagttggtatgaacaatgcataatatatgcaaggttcg 48681945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 50849123 - 50849085
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  50849123 tcagttggtaatgacaatgcataatatatgtaaggttcg 50849085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 6000193 - 6000144
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||| || ||||||||||||||||| ||||| |||||||| ||||    
T  6000193 tcagttggttaggacaatgcataatatatgcaaggtccgaggttcaaacc 6000144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 314 - 343
Target Start/End: Complemental strand, 6519929 - 6519900
Alignment:
Q  314 cagttggtaagaacaatgcataatatatgt 343  Q
    ||||||||||||||||||||||||||||||    
T  6519929 cagttggtaagaacaatgcataatatatgt 6519900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 9872155 - 9872106
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| | ||||||||||||||| |||||| | ||||||||||    
T  9872155 tcagttggtaaggataatgcataatatatgcaaggtttgcggttcgaacc 9872106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 12269034 - 12268985
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| ||||||||||||||||||| ||||| || ||||| ||||    
T  12269034 tcagttggtaggaacaatgcataatatatgcaaggtccggggttcaaacc 12268985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 13615662 - 13615613
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||| ||| ||||| | |||||||||||    
T  13615662 tcagttggtaaggacaatgcataatacatgcaaggtccaaggttcgaacc 13615613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 18056766 - 18056717
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| || ||  ||||||||||||    
T  18056766 tcagttggtaaggacaatgcataatatatgcaatgtgtgaggttcgaacc 18056717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 22946598 - 22946565
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||||||||||||||||||| |||||    
T  22946598 agttggtaagaacaatgcataatatatgcaaggt 22946565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 342
Target Start/End: Complemental strand, 25365046 - 25365017
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatg 342  Q
    ||||||||||||||||||||||||||||||    
T  25365046 tcagttggtaagaacaatgcataatatatg 25365017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 26329172 - 26329123
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| |||||||||||||||||| ||| ||||||||  |||||||||    
T  26329172 tcagttgataagaacaatgcataatacatgcaaggttcggagttcgaacc 26329123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 27533254 - 27533303
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||| |||||||| ||||| ||||    
T  27533254 tcagttggtagggacaatgcataatatatgcaaggttcggggttcaaacc 27533303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 28039910 - 28039861
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| |||||  |||||| |||||    
T  28039910 tcagttggtaaggacaatgcataatatatgcaaggtctgaggtttgaacc 28039861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 30678863 - 30678826
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttc 350  Q
    |||||||||| | |||||||||||||||||||||||||    
T  30678863 tcagttggtagggacaatgcataatatatgtaaggttc 30678826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 43843904 - 43843941
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcga 352  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  43843904 agttggtaaggacaatgcataatatatgcaaggttcga 43843941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 373
Target Start/End: Complemental strand, 45190320 - 45190259
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    ||||||||||| | ||||||||||||||||| |||||||| | ||| |||| ||| ||||||    
T  45190320 ttcagttggtatggacaatgcataatatatgcaaggttcgggattcaaaccctagccaccac 45190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000002; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 15062301 - 15062351
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  15062301 ttcagttggtaagtacaatgcataaaatatgtaaggttcggggttcgaacc 15062351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 2105919 - 2105960
Alignment:
Q  316 gttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  2105919 gttggtaaaaacaatgcataatatatgtaaggttcgaggttc 2105960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 32193909 - 32193865
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  32193909 tcagttggtaagaacaatgcataatatatgcaaggtacgaggttc 32193865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 404176 - 404234
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||| ||||||||||||||||| || || |||||||||||||  |||||||||    
T  404176 agttggtaaggacaatgcataatatatgcaatgtccgaggttcgaaccccagacaccac 404234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 9111057 - 9111107
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||| ||||||||||||||||||| ||||| || ||||||||||    
T  9111057 ttcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaacc 9111107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 15169942 - 15169991
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||| ||||    
T  15169942 tcagctggtaagtacaatgcataatatatgtaaggttcggggttcaaacc 15169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 15178714 - 15178763
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||| ||||    
T  15178714 tcagctggtaagtacaatgcataatatatgtaaggttcggggttcaaacc 15178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 31971540 - 31971589
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||| ||||    
T  31971540 tcagttggtaaggacaatgcataatatatgcaaggtccgaggttcaaacc 31971589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 6196581 - 6196533
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||||| ||||||||||||||||||| || ||| |||||||||    
T  6196581 tcagttggtaaggacaatgcataatatatgtaggggtcggggttcgaac 6196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 9334030 - 9333970
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||  ||| |||||||||||||||||||||||| | |||||||||||  ||||||||    
T  9334030 tcagttgacaaggacaatgcataatatatgtaaggtttggggttcgaacctcggacaccac 9333970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 10118928 - 10118988
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||||||||| ||||||||||| ||| |||  ||||||||||  |||||||||    
T  10118928 tcagttggtaagaacaatacataatatatgcaagattcatggttcgaaccccagacaccac 10118988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 24438332 - 24438288
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||    
T  24438332 tcagttggtaagaataatgcataatatatgtaaagttcggggttc 24438288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 4826314 - 4826345
Alignment:
Q  326 acaatgcataatatatgtaaggttcgaggttc 357  Q
    ||||||||||||||||||||||||||||||||    
T  4826314 acaatgcataatatatgtaaggttcgaggttc 4826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 8138508 - 8138473
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8138508 tcagttgataagaacaatgcataatatatgtaaggt 8138473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 10497202 - 10497155
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||| ||||| |||||||||||||||||||||||| | ||||||||    
T  10497202 tcagtttgtaaggacaatgcataatatatgtaaggtttgcggttcgaa 10497155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 12276281 - 12276234
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||||||||||||||||||||| || ||||| | ||||||    
T  12276281 tcagttggtaagaacaatgcataatatatgcaaagttcgggattcgaa 12276234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 13655172 - 13655234
Alignment:
Q  313 tcagttggtaagaacaatgcata--atatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||  |||||||||| || ||||||||||||| | ||||||||    
T  13655172 tcagttggtaaggacaatgcataatatatatgtaaagtccgaggttcgaaccctggacaccac 13655234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 26587403 - 26587450
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||    
T  26587403 tcagttagtaagaacaatgcataatatatgcaaggttctgggttcgaa 26587450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 32149149 - 32149184
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggt 348  Q
    |||||||||||||||||||||||||||||| |||||    
T  32149149 tcagttggtaagaacaatgcataatatatgcaaggt 32149184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 351
Target Start/End: Original strand, 788877 - 788915
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  788877 tcagttggtaaggacaatgcataatatatgcaaggttcg 788915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 1989092 - 1989043
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||| || ||||||||||||||||||||||| ||||||| |||||    
T  1989092 tcagttggtatga-caatgcataatatatgtaaggtttgaggttcaaacct 1989043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 8637488 - 8637438
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||| | ||||||||||||||||| ||||| |||||||| ||||    
T  8637488 ttcagttggtagggacaatgcataatatatgcaaggtccgaggttcaaacc 8637438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 15291738 - 15291692
Alignment:
Q  315 agttggtaagaacaatgcataatatatgtaaggttcgaggttcgaac 361  Q
    |||||||||| |||||| |||||||||| |||||| |||||||||||    
T  15291738 agttggtaaggacaatgaataatatatgcaaggtttgaggttcgaac 15291692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 16390440 - 16390490
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||| | ||||||||||||||||||||||| || ||||| |||||    
T  16390440 tcagttggtagggacaatgcataatatatgtaaggtccggggttcaaacct 16390490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 19277585 - 19277635
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    ||||||| || ||||||||||||||||| |||||||||  |||||||||||    
T  19277585 tcagttgataggaacaatgcataatataggtaaggttcagggttcgaacct 19277635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 23507442 - 23507392
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||||||||| ||||| ||||| |||||||||||| | ||||||||||    
T  23507442 ttcagttggtaaggacaatacataaaatatgtaaggtttggggttcgaacc 23507392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 351
Target Start/End: Complemental strand, 33938729 - 33938691
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcg 351  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  33938729 tcagttggtatgaacaatgcataatatatgcaaggttcg 33938691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 35110080 - 35110114
Alignment:
Q  328 aatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||||||||||| ||||||||||||    
T  35110080 aatgcataatatatgtaaggtttgaggttcgaacc 35110114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 2726467 - 2726418
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||||||||| ||||| || ||||||||||    
T  2726467 tcagttggtatggacaatgcataatatatgcaaggtccggggttcgaacc 2726418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 10320481 - 10320440
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgagg 354  Q
    ||||||||||||||||||| || |||||| ||||||||||||    
T  10320481 tcagttggtaagaacaatgtatcatatatataaggttcgagg 10320440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 350
Target Start/End: Original strand, 12319256 - 12319293
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttc 350  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  12319256 tcagttggtaaggacaatgcataatataggtaaggttc 12319293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 12329287 - 12329336
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| || ||||||| ||||| ||||||||||||| |||||||||||    
T  12329287 tcagttgttatgaacaatacataaaatatgtaaggttccaggttcgaacc 12329336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 17829358 - 17829309
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||| || |||||||||||||| || || |||||||||||||    
T  17829358 tcagttggtaaggactatgcataatatatgcaaagtccgaggttcgaacc 17829309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 24623367 - 24623318
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| || | |||||||||||||||||||||||||| ||||| ||||    
T  24623367 tcagttgatatggacaatgcataatatatgtaaggttcggggttcaaacc 24623318  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 28758340 - 28758291
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||| ||||||||||||||||||||||||| || || |||||||| ||||    
T  28758340 tcagctggtaagaacaatgcataatatatgcaaagtccgaggttcaaacc 28758291  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 350
Target Start/End: Original strand, 28951410 - 28951447
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttc 350  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  28951410 tcagttggtatgaacaatgcataatatatgcaaggttc 28951447  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 34701157 - 34701202
Alignment:
Q  312 ttcagttggtaagaacaatgcataatatatgtaaggttcgaggttc 357  Q
    ||||||||||| ||||||||||||||||||| |||||  |||||||    
T  34701157 ttcagttggtaggaacaatgcataatatatgcaaggtctgaggttc 34701202  T

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Target: scaffold0129 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 44905 - 44869
Alignment:
Q  137 tattggtgttgtggtgagagataatgaagatgttgtc 173  Q
    |||||||||||||||||||||||||||||||||||||    
T  44905 tattggtgttgtggtgagagataatgaagatgttgtc 44869  T

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Target: scaffold0238 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 25400 - 25460
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| ||||||||||||||||| ||||| |  ||||||||||  |||||||||    
T  25400 tcagttggtaaggacaatgcataatatatgcaaggtccagggttcgaaccccagacaccac 25460  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 16170 - 16209
Alignment:
Q  321 taagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  16170 taaggacaatgcataatatatgtaaagttcgaggttcgaa 16209  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 75336 - 75383
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaa 360  Q
    |||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  75336 tcagttggtaaggacaatgcataatatatgcaaggtccggggttcgaa 75383  T

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Target: scaffold1120 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 1927 - 1973
Alignment:
Q  316 gttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    ||||||| ||||||||||||||||||| |||||||| ||||| ||||    
T  1927 gttggtaggaacaatgcataatatatgcaaggttcgtggttcaaacc 1973  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 40009 - 40059
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacct 363  Q
    |||||||||| | ||||||||||||||||| |||||| ||||||| |||||    
T  40009 tcagttggtatggacaatgcataatatatgcaaggttagaggttcaaacct 40059  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 120001 - 119963
Alignment:
Q  316 gttggtaagaacaatgcataatatatgtaaggttcgagg 354  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  120001 gttggtaaggacaatgcataatatatgcaaggttcgagg 119963  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 316 - 354
Target Start/End: Complemental strand, 210125 - 210087
Alignment:
Q  316 gttggtaagaacaatgcataatatatgtaaggttcgagg 354  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  210125 gttggtaaggacaatgcataatatatgcaaggttcgagg 210087  T

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Target: scaffold1160 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 1762 - 1713
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||| | ||||||||||| ||||| ||||||||||||| |||||    
T  1762 tcagttggtagggacaatgcataaaatatgcaaggttcgaggtttgaacc 1713  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 3395 - 3350
Alignment:
Q  317 ttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||| ||||||||||||| ||||||||| |||| ||||||||    
T  3395 ttggtaaggacaatgcataatagatgtaaggtccgagattcgaacc 3350  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 45954 - 46003
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||||||||| |||| |||||||||| ||| | |||||||||||||    
T  45954 tcagttggtaagaataatgtataatatatgcaagatccgaggttcgaacc 46003  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 342
Target Start/End: Original strand, 25706 - 25735
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatg 342  Q
    ||||||||||||||||||||||||||||||    
T  25706 tcagttggtaagaacaatgcataatatatg 25735  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 76051 - 75989
Alignment:
Q  313 tcagttggtaagaacaatgcat---aatatatgtaaggttcgaggttcgaaccttagacaccac 373  Q
    |||||||||||| |||||||||   |||||||||||||||| ||||||||| || |||||||||    
T  76051 tcagttggtaaggacaatgcataataatatatgtaaggttc-aggttcgaatctcagacaccac 75989  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 204601 - 204650
Alignment:
Q  313 tcagttggtaagaacaatgcataatatatgtaaggttcgaggttcgaacc 362  Q
    |||||||| | ||||||||||||| |||||||||||||| ||||| ||||    
T  204601 tcagttggcatgaacaatgcataaaatatgtaaggttcggggttcaaacc 204650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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