View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11105_low_8 (Length: 487)

Name: NF11105_low_8
Description: NF11105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11105_low_8
NF11105_low_8
[»] chr8 (58 HSPs)
chr8 (17-217)||(35038103-35038304)
chr8 (343-474)||(35037971-35038098)
chr8 (218-342)||(15726172-15726296)
chr8 (212-342)||(34332106-34332236)
chr8 (217-342)||(37161503-37161628)
chr8 (218-342)||(14498585-14498709)
chr8 (218-342)||(29773445-29773569)
chr8 (218-342)||(38502184-38502308)
chr8 (217-342)||(28090191-28090315)
chr8 (218-342)||(23286565-23286689)
chr8 (218-342)||(36002356-36002480)
chr8 (215-342)||(44934896-44935023)
chr8 (218-342)||(37511088-37511212)
chr8 (220-342)||(12163225-12163347)
chr8 (220-342)||(12407653-12407775)
chr8 (218-342)||(945976-946099)
chr8 (218-342)||(29229460-29229583)
chr8 (233-342)||(10280575-10280684)
chr8 (218-342)||(29459633-29459758)
chr8 (218-339)||(2273010-2273131)
chr8 (218-339)||(17642074-17642195)
chr8 (218-328)||(16323559-16323669)
chr8 (218-339)||(37465684-37465805)
chr8 (218-339)||(42444503-42444624)
chr8 (220-339)||(43921127-43921246)
chr8 (217-339)||(43049536-43049657)
chr8 (215-339)||(529264-529388)
chr8 (220-317)||(1043060-1043158)
chr8 (218-342)||(29454490-29454616)
chr8 (218-339)||(6800058-6800178)
chr8 (218-342)||(23274622-23274747)
chr8 (218-325)||(19718650-19718757)
chr8 (212-339)||(39347415-39347542)
chr8 (243-337)||(17792229-17792323)
chr8 (218-339)||(4475046-4475166)
chr8 (218-323)||(43485342-43485447)
chr8 (217-339)||(26439808-26439931)
chr8 (214-323)||(34633859-34633970)
chr8 (221-342)||(40776900-40777022)
chr8 (218-342)||(4214776-4214902)
chr8 (218-342)||(6631187-6631312)
chr8 (243-339)||(36886447-36886543)
chr8 (212-342)||(41720241-41720373)
chr8 (270-342)||(45452668-45452740)
chr8 (218-342)||(2749589-2749713)
chr8 (217-323)||(29604314-29604421)
chr8 (212-342)||(15451729-15451861)
chr8 (218-333)||(13483188-13483302)
chr8 (218-300)||(39300412-39300495)
chr8 (243-337)||(27171940-27172033)
chr8 (216-300)||(2261027-2261112)
chr8 (215-299)||(5215646-5215730)
chr8 (218-323)||(17096581-17096687)
chr8 (215-323)||(28897203-28897313)
chr8 (216-276)||(34047765-34047825)
chr8 (218-342)||(36162190-36162317)
chr8 (215-287)||(39721967-39722039)
chr8 (212-339)||(40578687-40578815)
[»] chr3 (70 HSPs)
chr3 (218-342)||(42364209-42364333)
chr3 (217-342)||(38785364-38785489)
chr3 (212-342)||(44670540-44670670)
chr3 (221-342)||(29347542-29347663)
chr3 (218-342)||(11140247-11140370)
chr3 (218-342)||(29786879-29787003)
chr3 (218-342)||(31308877-31309001)
chr3 (218-342)||(35171475-35171599)
chr3 (218-342)||(42067579-42067703)
chr3 (218-342)||(876504-876628)
chr3 (218-342)||(40650067-40650191)
chr3 (217-342)||(42848488-42848615)
chr3 (218-342)||(44365621-44365748)
chr3 (218-342)||(47948676-47948801)
chr3 (218-328)||(27082641-27082752)
chr3 (218-342)||(45636089-45636212)
chr3 (218-342)||(39630172-39630297)
chr3 (221-342)||(46959557-46959676)
chr3 (279-342)||(379007-379070)
chr3 (219-339)||(4659757-4659877)
chr3 (220-342)||(40477759-40477882)
chr3 (218-339)||(52082307-52082435)
chr3 (218-342)||(9506903-9507028)
chr3 (218-342)||(9514878-9515003)
chr3 (218-342)||(23456454-23456579)
chr3 (218-342)||(26885253-26885378)
chr3 (218-339)||(27647478-27647599)
chr3 (216-339)||(43715033-43715156)
chr3 (218-339)||(21289098-21289219)
chr3 (213-333)||(4663429-4663549)
chr3 (215-339)||(53516866-53516990)
chr3 (220-342)||(51344376-51344499)
chr3 (218-292)||(27079711-27079785)
chr3 (217-342)||(33006298-33006424)
chr3 (243-337)||(45635968-45636062)
chr3 (218-337)||(42622136-42622256)
chr3 (218-342)||(44522023-44522147)
chr3 (243-339)||(3136295-3136391)
chr3 (217-333)||(25592297-25592413)
chr3 (294-342)||(37491992-37492040)
chr3 (282-342)||(45290796-45290856)
chr3 (270-342)||(45538926-45538998)
chr3 (216-335)||(19547487-19547606)
chr3 (213-299)||(29491658-29491745)
chr3 (218-342)||(32636626-32636752)
chr3 (243-337)||(50030038-50030132)
chr3 (219-339)||(15996821-15996942)
chr3 (218-314)||(16136932-16137029)
chr3 (220-342)||(41282815-41282939)
chr3 (216-298)||(40021077-40021160)
chr3 (221-342)||(1129411-1129532)
chr3 (213-342)||(7352449-7352579)
chr3 (221-317)||(31479559-31479656)
chr3 (270-342)||(40473887-40473960)
chr3 (224-276)||(379225-379277)
chr3 (243-339)||(32717678-32717774)
chr3 (243-299)||(34593718-34593774)
chr3 (221-300)||(7671806-7671885)
chr3 (243-298)||(8965941-8965996)
chr3 (218-342)||(43745628-43745754)
chr3 (217-342)||(50412353-50412480)
chr3 (243-317)||(25482550-25482624)
chr3 (218-323)||(28718227-28718333)
chr3 (263-317)||(54262840-54262894)
chr3 (215-323)||(5532345-5532454)
chr3 (270-339)||(25834284-25834353)
chr3 (270-342)||(40727630-40727702)
chr3 (270-343)||(43388423-43388496)
chr3 (218-317)||(8433437-8433537)
chr3 (257-337)||(52162436-52162515)
[»] chr5 (55 HSPs)
chr5 (220-342)||(6560828-6560950)
chr5 (217-342)||(43237635-43237760)
chr5 (218-342)||(34302646-34302772)
chr5 (218-342)||(6532579-6532703)
chr5 (218-342)||(1661976-1662100)
chr5 (218-342)||(2141242-2141366)
chr5 (217-342)||(2029352-2029477)
chr5 (219-342)||(3056386-3056509)
chr5 (215-342)||(21605645-21605772)
chr5 (220-342)||(24097873-24097995)
chr5 (218-339)||(9589209-9589330)
chr5 (221-342)||(32467046-32467167)
chr5 (218-342)||(6114056-6114180)
chr5 (224-342)||(18228741-18228859)
chr5 (218-342)||(42917117-42917242)
chr5 (216-342)||(9534868-9534991)
chr5 (218-342)||(2413927-2414048)
chr5 (221-342)||(13410545-13410665)
chr5 (212-339)||(4617997-4618124)
chr5 (221-339)||(13090917-13091035)
chr5 (218-339)||(41802106-41802227)
chr5 (214-342)||(36752491-36752620)
chr5 (221-339)||(14967235-14967353)
chr5 (218-342)||(29743895-29744020)
chr5 (217-342)||(21051586-21051711)
chr5 (243-328)||(35817644-35817729)
chr5 (217-339)||(28332119-28332242)
chr5 (217-339)||(12362643-12362765)
chr5 (221-339)||(27116465-27116583)
chr5 (232-339)||(37431633-37431744)
chr5 (216-339)||(13795555-13795678)
chr5 (270-342)||(13118854-13118926)
chr5 (270-342)||(42486887-42486959)
chr5 (243-337)||(13645795-13645889)
chr5 (243-337)||(32455328-32455422)
chr5 (243-337)||(38355003-38355097)
chr5 (230-323)||(14096705-14096798)
chr5 (243-335)||(2318715-2318807)
chr5 (212-299)||(25929554-25929642)
chr5 (243-342)||(35682122-35682217)
chr5 (220-333)||(3425369-3425481)
chr5 (294-342)||(22780590-22780638)
chr5 (249-323)||(3881864-3881938)
chr5 (221-323)||(23259046-23259149)
chr5 (217-300)||(29996509-29996592)
chr5 (220-342)||(33210372-33210495)
chr5 (220-274)||(33145210-33145264)
chr5 (216-342)||(36339127-36339255)
chr5 (250-328)||(36880818-36880896)
chr5 (218-299)||(16432976-16433057)
chr5 (218-342)||(29959879-29960004)
chr5 (218-324)||(39979368-39979476)
chr5 (218-317)||(33678155-33678255)
chr5 (221-342)||(36428187-36428311)
chr5 (243-283)||(39041667-39041707)
[»] chr1 (83 HSPs)
chr1 (220-342)||(51984936-51985058)
chr1 (221-342)||(51781386-51781507)
chr1 (218-342)||(52303013-52303137)
chr1 (218-342)||(16482576-16482699)
chr1 (218-342)||(28493810-28493934)
chr1 (212-342)||(8461809-8461938)
chr1 (218-342)||(31930980-31931104)
chr1 (218-342)||(45423609-45423733)
chr1 (218-338)||(50905581-50905701)
chr1 (216-342)||(37498742-37498867)
chr1 (224-342)||(23459838-23459958)
chr1 (221-342)||(26102755-26102876)
chr1 (218-335)||(27295058-27295175)
chr1 (217-342)||(39190839-39190964)
chr1 (217-342)||(39971551-39971676)
chr1 (218-342)||(922124-922248)
chr1 (218-342)||(35305151-35305275)
chr1 (218-342)||(41073270-41073393)
chr1 (218-342)||(38262416-38262540)
chr1 (218-342)||(46771014-46771138)
chr1 (224-342)||(51519788-51519904)
chr1 (214-339)||(5956812-5956937)
chr1 (214-339)||(2247063-2247188)
chr1 (243-342)||(29106646-29106748)
chr1 (220-339)||(11778921-11779040)
chr1 (215-314)||(18641885-18641984)
chr1 (220-328)||(51184044-51184153)
chr1 (212-339)||(632933-633060)
chr1 (212-339)||(23304401-23304528)
chr1 (218-342)||(35874220-35874345)
chr1 (224-342)||(45673333-45673439)
chr1 (246-339)||(50239519-50239612)
chr1 (215-339)||(7121954-7122077)
chr1 (250-317)||(44246305-44246372)
chr1 (243-342)||(6520267-6520366)
chr1 (215-339)||(48616733-48616856)
chr1 (243-337)||(17525462-17525556)
chr1 (271-333)||(43306582-43306644)
chr1 (221-310)||(23056768-23056857)
chr1 (218-342)||(51056197-51056321)
chr1 (222-339)||(52260817-52260934)
chr1 (220-339)||(26011227-26011346)
chr1 (244-339)||(35910188-35910283)
chr1 (218-333)||(42317116-42317231)
chr1 (221-339)||(27352850-27352968)
chr1 (218-339)||(9166873-9166994)
chr1 (244-317)||(32144975-32145048)
chr1 (218-342)||(34038446-34038571)
chr1 (218-342)||(38260802-38260927)
chr1 (218-339)||(47719258-47719378)
chr1 (217-342)||(6526709-6526836)
chr1 (243-342)||(31821864-31821963)
chr1 (218-323)||(477735-477841)
chr1 (218-342)||(24381316-24381442)
chr1 (218-339)||(28791653-28791774)
chr1 (270-343)||(42647450-42647523)
chr1 (216-342)||(51369327-51369441)
chr1 (243-339)||(36275002-36275098)
chr1 (270-342)||(52180287-52180359)
chr1 (252-339)||(2620680-2620767)
chr1 (217-342)||(31075891-31076018)
chr1 (218-297)||(34256453-34256532)
chr1 (217-342)||(51787749-51787876)
chr1 (215-300)||(48977200-48977286)
chr1 (220-341)||(49854107-49854228)
chr1 (268-337)||(45809494-45809563)
chr1 (243-339)||(33906344-33906440)
chr1 (218-342)||(21072776-21072900)
chr1 (270-317)||(45622791-45622838)
chr1 (215-323)||(46281939-46282048)
chr1 (218-321)||(46872369-46872474)
chr1 (218-323)||(17554118-17554224)
chr1 (220-317)||(30263889-30263987)
chr1 (217-299)||(44978868-44978950)
chr1 (218-323)||(9260116-9260223)
chr1 (278-339)||(10179158-10179219)
chr1 (259-300)||(49616150-49616191)
chr1 (257-317)||(2665218-2665277)
chr1 (216-323)||(12227119-12227229)
chr1 (218-323)||(14077329-14077436)
chr1 (218-323)||(41568445-41568551)
chr1 (243-299)||(47601672-47601728)
chr1 (221-300)||(50631916-50631996)
[»] chr4 (66 HSPs)
chr4 (217-342)||(3716324-3716449)
chr4 (218-342)||(34280511-34280635)
chr4 (217-342)||(30539568-30539693)
chr4 (218-342)||(27538915-27539039)
chr4 (212-342)||(30342819-30342948)
chr4 (217-342)||(41759942-41760068)
chr4 (224-342)||(52589077-52589195)
chr4 (218-342)||(51436095-51436220)
chr4 (218-342)||(37855121-37855245)
chr4 (212-342)||(28037679-28037810)
chr4 (215-342)||(37519246-37519373)
chr4 (215-342)||(37523462-37523589)
chr4 (218-337)||(48066292-48066411)
chr4 (218-336)||(43137653-43137771)
chr4 (218-342)||(14802712-14802836)
chr4 (218-342)||(55722476-55722600)
chr4 (215-342)||(38835849-38835974)
chr4 (243-342)||(46041726-46041825)
chr4 (218-339)||(31908443-31908564)
chr4 (217-342)||(48579192-48579316)
chr4 (218-328)||(47302029-47302141)
chr4 (218-343)||(38975277-38975401)
chr4 (218-339)||(9858244-9858365)
chr4 (218-339)||(29646624-29646745)
chr4 (218-342)||(53389128-53389253)
chr4 (218-342)||(52809227-52809350)
chr4 (218-339)||(36091059-36091179)
chr4 (222-342)||(36592316-36592437)
chr4 (282-342)||(33076263-33076323)
chr4 (218-339)||(56361598-56361717)
chr4 (222-339)||(39162090-39162207)
chr4 (218-339)||(46216057-46216178)
chr4 (218-339)||(1414387-1414505)
chr4 (217-288)||(18425454-18425525)
chr4 (221-339)||(47302399-47302517)
chr4 (218-342)||(352754-352879)
chr4 (218-342)||(33491443-33491568)
chr4 (218-342)||(43363327-43363452)
chr4 (215-342)||(423147-423275)
chr4 (218-333)||(9356673-9356789)
chr4 (243-339)||(53695682-53695778)
chr4 (215-317)||(53936819-53936922)
chr4 (218-342)||(34828722-34828847)
chr4 (215-339)||(46004609-46004733)
chr4 (216-259)||(30891453-30891496)
chr4 (216-342)||(50383611-50383738)
chr4 (243-337)||(42881315-42881409)
chr4 (216-323)||(24291976-24292084)
chr4 (243-342)||(5970981-5971080)
chr4 (270-342)||(31998781-31998853)
chr4 (220-339)||(32289190-32289310)
chr4 (215-342)||(42177622-42177750)
chr4 (215-338)||(54996094-54996218)
chr4 (213-323)||(39380699-39380810)
chr4 (307-342)||(52591893-52591928)
chr4 (216-323)||(13548703-13548812)
chr4 (306-339)||(30891420-30891453)
chr4 (218-339)||(32737474-32737595)
chr4 (215-276)||(40438983-40439044)
chr4 (218-342)||(50775774-50775899)
chr4 (218-298)||(31681337-31681417)
chr4 (220-323)||(32570370-32570474)
chr4 (270-342)||(36631316-36631388)
chr4 (211-299)||(37992007-37992095)
chr4 (212-342)||(50607678-50607810)
chr4 (270-342)||(54506154-54506226)
[»] chr2 (48 HSPs)
chr2 (216-342)||(11227625-11227751)
chr2 (218-342)||(58920-59044)
chr2 (216-342)||(42427853-42427979)
chr2 (220-342)||(6884161-6884283)
chr2 (218-342)||(14533104-14533228)
chr2 (220-342)||(34665573-34665695)
chr2 (218-342)||(4673884-4674008)
chr2 (215-342)||(5091994-5092120)
chr2 (215-337)||(15771597-15771719)
chr2 (220-342)||(5389483-5389605)
chr2 (221-342)||(11813478-11813600)
chr2 (212-339)||(12547358-12547485)
chr2 (218-342)||(1353507-1353630)
chr2 (215-339)||(3383473-3383596)
chr2 (220-342)||(33423296-33423420)
chr2 (221-342)||(37083211-37083332)
chr2 (218-342)||(38963346-38963470)
chr2 (232-339)||(5420241-5420348)
chr2 (212-339)||(6438460-6438586)
chr2 (220-339)||(36489360-36489479)
chr2 (212-339)||(7467114-7467248)
chr2 (216-339)||(34438470-34438594)
chr2 (247-339)||(40370494-40370586)
chr2 (218-328)||(6513560-6513670)
chr2 (220-306)||(8371884-8371970)
chr2 (220-333)||(30980882-30980996)
chr2 (215-342)||(45157527-45157655)
chr2 (244-339)||(19636383-19636478)
chr2 (244-339)||(19834976-19835071)
chr2 (218-339)||(11598114-11598236)
chr2 (217-339)||(37909378-37909500)
chr2 (218-342)||(40947045-40947170)
chr2 (218-342)||(39620191-39620318)
chr2 (218-342)||(35896694-35896819)
chr2 (294-339)||(3810747-3810792)
chr2 (218-339)||(20212439-20212559)
chr2 (219-275)||(42046076-42046132)
chr2 (217-285)||(32499149-32499217)
chr2 (268-323)||(37425514-37425570)
chr2 (212-299)||(8362731-8362818)
chr2 (212-323)||(21425206-21425319)
chr2 (221-299)||(5615378-5615456)
chr2 (218-342)||(6945340-6945466)
chr2 (270-323)||(9122457-9122510)
chr2 (218-299)||(11088216-11088297)
chr2 (221-286)||(12071158-12071223)
chr2 (218-323)||(15176342-15176449)
chr2 (270-342)||(44144366-44144438)
[»] chr7 (48 HSPs)
chr7 (218-342)||(30862789-30862913)
chr7 (221-342)||(1691274-1691394)
chr7 (217-342)||(38129667-38129792)
chr7 (218-342)||(41913377-41913500)
chr7 (221-342)||(28326684-28326805)
chr7 (218-342)||(30624003-30624129)
chr7 (212-342)||(3909922-3910052)
chr7 (218-342)||(42710931-42711055)
chr7 (218-339)||(41381497-41381618)
chr7 (215-342)||(40941872-40942000)
chr7 (217-342)||(27956376-27956501)
chr7 (218-339)||(45857759-45857880)
chr7 (215-339)||(30936377-30936501)
chr7 (215-339)||(44964106-44964230)
chr7 (217-339)||(18990090-18990212)
chr7 (215-317)||(41331726-41331828)
chr7 (218-339)||(11485996-11486117)
chr7 (217-342)||(21699574-21699696)
chr7 (218-321)||(23331700-23331805)
chr7 (215-342)||(47748082-47748211)
chr7 (218-339)||(42974895-42975016)
chr7 (222-339)||(31482378-31482495)
chr7 (243-339)||(30317220-30317316)
chr7 (219-286)||(31903423-31903490)
chr7 (218-339)||(43069080-43069200)
chr7 (216-339)||(43750073-43750196)
chr7 (221-342)||(1806484-1806606)
chr7 (270-339)||(3214571-3214640)
chr7 (218-281)||(45458698-45458761)
chr7 (244-342)||(41809228-41809325)
chr7 (218-342)||(35291608-35291733)
chr7 (215-339)||(8770655-8770773)
chr7 (243-339)||(20439100-20439196)
chr7 (215-317)||(2290787-2290890)
chr7 (218-342)||(35357701-35357826)
chr7 (218-342)||(47369501-47369626)
chr7 (218-317)||(15715904-15716004)
chr7 (217-323)||(47219955-47220062)
chr7 (218-323)||(6791737-6791844)
chr7 (218-323)||(41968722-41968829)
chr7 (216-323)||(9682325-9682434)
chr7 (218-339)||(11750706-11750828)
chr7 (264-337)||(15584826-15584899)
chr7 (243-337)||(29682070-29682164)
chr7 (217-342)||(30891277-30891405)
chr7 (243-299)||(7527072-7527128)
chr7 (270-342)||(26413889-26413961)
chr7 (216-299)||(30076657-30076741)
[»] chr6 (31 HSPs)
chr6 (218-342)||(13390385-13390509)
chr6 (218-342)||(26358835-26358959)
chr6 (218-342)||(32834056-32834180)
chr6 (220-342)||(17545607-17545728)
chr6 (216-342)||(6848508-6848634)
chr6 (218-342)||(4110551-4110675)
chr6 (218-342)||(24212912-24213035)
chr6 (232-342)||(24487569-24487679)
chr6 (218-342)||(8401699-8401822)
chr6 (220-342)||(2258905-2259028)
chr6 (215-339)||(11446733-11446857)
chr6 (243-342)||(4901233-4901330)
chr6 (218-328)||(1096221-1096331)
chr6 (218-339)||(34196094-34196215)
chr6 (217-342)||(4509429-4509555)
chr6 (218-339)||(15383489-15383610)
chr6 (212-323)||(8549855-8549967)
chr6 (221-338)||(30020644-30020761)
chr6 (216-317)||(9661750-9661852)
chr6 (213-338)||(33573994-33574119)
chr6 (218-333)||(6265225-6265340)
chr6 (217-339)||(17010360-17010482)
chr6 (207-342)||(33574451-33574588)
chr6 (270-342)||(243168-243240)
chr6 (243-339)||(8376309-8376405)
chr6 (270-342)||(11763455-11763527)
chr6 (212-299)||(21181133-21181220)
chr6 (219-300)||(13719112-13719194)
chr6 (218-323)||(16892903-16893009)
chr6 (218-342)||(9686776-9686901)
chr6 (215-267)||(7344673-7344725)
[»] scaffold0077 (1 HSPs)
scaffold0077 (243-342)||(48035-48134)
[»] scaffold0005 (1 HSPs)
scaffold0005 (218-342)||(36891-37015)
[»] scaffold0625 (1 HSPs)
scaffold0625 (217-339)||(6548-6670)
[»] scaffold0432 (1 HSPs)
scaffold0432 (218-339)||(3314-3436)
[»] scaffold0604 (1 HSPs)
scaffold0604 (220-339)||(2022-2141)
[»] scaffold0113 (1 HSPs)
scaffold0113 (232-335)||(29259-29362)
[»] scaffold0060 (1 HSPs)
scaffold0060 (218-317)||(45761-45862)
[»] scaffold0775 (1 HSPs)
scaffold0775 (213-323)||(139-250)
[»] scaffold0072 (1 HSPs)
scaffold0072 (218-323)||(47875-47981)
[»] scaffold0184 (1 HSPs)
scaffold0184 (215-323)||(16883-16992)
[»] scaffold0174 (1 HSPs)
scaffold0174 (272-337)||(32617-32682)
[»] scaffold0078 (1 HSPs)
scaffold0078 (215-323)||(55852-55961)


Alignment Details
Target: chr8 (Bit Score: 138; Significance: 6e-72; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 35038304 - 35038103
Alignment:
Q  17 attataaaataataagttataagagaaaataaaatcaacttcaaacgaagagatac-acccaataatattaaaaacacaaacaatttaatgaacataaga 115  Q
    |||||||||| |||| |||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  35038304 attataaaattataaattataagaaaaaataaaatcaacttcgaacggagagataccacccaataatattaaaaacacaaacaatttagtgaaaataaga 35038205  T
Q  116 aagcattttaaatggtaaatacatcttgaatactatggtcattttaatatcaataaacaaaataagctgtctattttgttttttcttctacgtaagtttt 215  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||| ||||||||    
T  35038204 aagcattttaaattgtaaatatatcttgaatactatgatcattttaatatcaataaacgaaataagttctctattttgttttttcttctacttaagtttt 35038105  T
Q  216 at 217  Q
    ||    
T  35038104 at 35038103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 343 - 474
Target Start/End: Complemental strand, 35038098 - 35037971
Alignment:
Q  343 tgacatttaatttcaccaatcttttgacattgcatatataaccacgtgtattgcatacattatatacttattgaagatattgtcaaacaaataataccct 442  Q
    ||||||||||||||||||||||||||||||||||||    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  35038098 tgacatttaatttcaccaatcttttgacattgcata----accacgtgtatttcatacattgtatacttattgaagatattgtcaaacaaataataccct 35038003  T
Q  443 cagatgagtcctgattggccgtcaactgcttc 474  Q
    ||||||||||||||||||||||||||||||||    
T  35038002 cagatgagtcctgattggccgtcaactgcttc 35037971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 15726296 - 15726172
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15726296 ggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaattatttt 15726197  T
Q  318 ctatcacctatgattataataacta 342  Q
    |||||||||||||||||||||||||    
T  15726196 ctatcacctatgattataataacta 15726172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 34332106 - 34332236
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||||||||||||||||| |||||||||| |||| |||| ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||     
T  34332106 ttttatggcaaattctatggtacacccaataatttaagtgcattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaa 34332205  T
Q  312 tattttctatcacctatgattataataacta 342  Q
    ||||||||||||||||| |||||||||||||    
T  34332206 tattttctatcacctataattataataacta 34332236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 37161503 - 37161628
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||| ||||||| |||||||||  |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  37161503 tggcaagttctatgctacacccaacaatttgagtgtataggtacatcaaatccttaaattaatagttaaatgagttattttttataggaaaaaattattt 37161602  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  37161603 tctatcacctataattataataacta 37161628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 14498709 - 14498585
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  14498709 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 14498610  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||| | |||||||||||||    
T  14498609 ctatcacctgtaattataataacta 14498585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 29773445 - 29773569
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||| ||||||    
T  29773445 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgatttattttttgtaggaaaaaaatatttt 29773544  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  29773545 ctatcacctataattataataacta 29773569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 38502184 - 38502308
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  38502184 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 38502283  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  38502284 ctatcacctataattataataacta 38502308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 28090191 - 28090315
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  28090191 tggcaaattctatggtacacccaataatttgagtatattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaa-tattt 28090289  T
Q  317 tctatcacctatgattataataacta 342  Q
    || ||||||||| |||||||||||||    
T  28090290 tccatcacctataattataataacta 28090315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 23286565 - 23286689
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||| ||  ||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  23286565 ggcaaattctatggtacacctaacaatttgcgtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 23286664  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  23286665 ctatcacctataattataataacta 23286689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 36002356 - 36002480
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||| ||||  ||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  36002356 ggcaagttctatggtacatccaacaatttgagtgtattagtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 36002455  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  36002456 ctatcacctataattataataacta 36002480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 44934896 - 44935023
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||| ||||||||||| |||||||||  |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||    
T  44934896 tatgacaaattctatggtacacccaacaatttgaatgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgcaggaaaaaaatat 44934995  T
Q  315 tttctatcacctatgattataataacta 342  Q
    |||| ||||||||| |||||||||||||    
T  44934996 tttccatcacctataattataataacta 44935023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 37511088 - 37511212
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||| ||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  37511088 ggcaaattcgatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 37511187  T
Q  318 ctatcacctatgattataataacta 342  Q
    | ||||||||| |||||||||||||    
T  37511188 ccatcacctataattataataacta 37511212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 12163347 - 12163225
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| | |||||||  |||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  12163347 caaattctatggtgcacccaaccatttgaatgcattggtacatcaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattaatttct 12163248  T
Q  320 atcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||    
T  12163247 atcacctataattataataacta 12163225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 12407775 - 12407653
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| | |||||||  |||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  12407775 caaattctatggtgcacccaaccatttgaatgcattggtacatcaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattaatttct 12407676  T
Q  320 atcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||    
T  12407675 atcacctataattataataacta 12407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 945976 - 946099
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||| | |||| ||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  945976 ggcaaattctacggtacatccaaccatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaatta-ttt 946074  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  946075 ctatcacctataattataataacta 946099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 29229583 - 29229460
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||||||||||||||||||| |||    
T  29229583 ggcaaattctatggtacacccaaccatttgagtgtattggtacaccaaattcttaaattaatagttaagtgagttattttttgtaggaaaaaatta-ttt 29229485  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||| ||||| |||||||||||||    
T  29229484 ctatcgcctataattataataacta 29229460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 233 - 342
Target Start/End: Original strand, 10280575 - 10280684
Alignment:
Q  233 acacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgatt 332  Q
    ||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||    
T  10280575 acacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaattattttatatcacctataatt 10280674  T
Q  333 ataataacta 342  Q
    ||| ||||||    
T  10280675 atagtaacta 10280684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 29459633 - 29459758
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagg-aaaaaattattt 316  Q
    |||||||| |||| |||||||||  |||||||||||||| |  ||||||| |||||||| |||||||||| |||||||||||||||| |||||| |||||    
T  29459633 ggcaaattttatggtacacccaacaatttgagtgtattgatctatcaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaaatattt 29459732  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  29459733 tctatcacctataattataataacta 29459758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 2273010 - 2273131
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||  ||  ||||||| ||||    
T  2273010 ggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttatttttttaagagaaaaattgtttt 2273109  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  2273110 ctatcacctataattataataa 2273131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 17642074 - 17642195
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| |||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  17642074 ggcaaattctatggtacatccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 17642173  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  17642174 ctatcacctataattataataa 17642195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 16323559 - 16323669
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||| ||||||||||  |||||| |||| ||  ||||||| ||||    
T  16323559 ggcaaattctatgatacacccaaagatttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttattatttgaagagaaaaattgtttt 16323658  T
Q  318 ctatcacctat 328  Q
    |||||||||||    
T  16323659 ctatcacctat 16323669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 37465684 - 37465805
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| ||||  |||| |||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||  ||||||||||||    
T  37465684 ggcaaattctatggtacatccaaaaatttaagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaattatttt 37465783  T
Q  318 ctatcacctatgattataataa 339  Q
     |||||||||| ||||||||||    
T  37465784 ttatcacctataattataataa 37465805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 42444624 - 42444503
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| | || |||||||||||||||||||| |||||| ||||||| ||||||||||  | ||||||||| ||  ||||||||||||    
T  42444624 ggcaaattctatggtacatctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctattttttgaagagaaaaattatttt 42444525  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||| ||| ||||||||||    
T  42444524 ctatcacttataattataataa 42444503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 220 - 339
Target Start/End: Original strand, 43921127 - 43921246
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    |||||| |||| || ||| || |||||||||||||||||||| |||||| || || | |||||||||||  |||||||||  || |||||||||||||||    
T  43921127 caaattttatggtatacctaaagatttgagtgtattggtacaccaaatcattgaactaatagttaaatatattattttttaaagaaaaaaattattttct 43921226  T
Q  320 atcacctatgattataataa 339  Q
    ||||||||| ||||||||||    
T  43921227 atcacctataattataataa 43921246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 43049536 - 43049657
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||| ||||  |||||| |||||||||||| |||||| ||||||| || |||||||  ||||||||||| ||  ||||||| |||    
T  43049536 tggcaaattctatggtacatccaaaaatttgaatgtattggtacaccaaatcattaaattaat-gttaaatgtgttattttttgaagagaaaaattgttt 43049634  T
Q  317 tctatcacctatgattataataa 339  Q
    |||||||||||| ||||||||||    
T  43049635 tctatcacctataattataataa 43049657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 339
Target Start/End: Original strand, 529264 - 529388
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| |||||  ||  ||||| ||||||||||||| ||| ||  |||||| ||||||||||  ||||||||||| ||  ||||||| |    
T  529264 tatggcaaattctatggtacactaaaaaatttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttattttttgaagagaaaaattgt 529363  T
Q  315 tttctatcacctatgattataataa 339  Q
    |||||||||||||| ||||||||||    
T  529364 tttctatcacctataattataataa 529388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 1043060 - 1043158
Alignment:
Q  220 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||| ||||||||||  |||||||||||| |||||| | | || ||||||| ||||||||||||||||||||||| || |||| ||||||||    
T  1043060 caaattctatggtacacccaatatatttgagtgtatcggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattatttt 1043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 29454616 - 29454490
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatt-ttttgtaggaaaaaattatt 315  Q
    ||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| |||||||||||||||||| ||||| || |||| ||||||    
T  29454616 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttatttttttgaagaaaaatattatt 29454517  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||  ||| |||||||||||||    
T  29454516 ttttatcatttataattataataacta 29454490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 6800178 - 6800058
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||| |||||| || |||| ||||||||||  ||| ||||||  ||  ||||||| ||||    
T  6800178 ggcaaattttatggtacactcaaagatttgagtgtattggtacaccaaatcattgaattaatagttaaatgtgtt-tttttttaagagaaaaattgtttt 6800080  T
Q  318 ctatcacctatgattataataa 339  Q
    |||| |||||| ||||||||||    
T  6800079 ctattacctataattataataa 6800058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 23274622 - 23274747
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaattattt 316  Q
    ||||||||||| | ||||| | |  |||||||||||||||| || |||||| ||||||| |||||||||  ||||||||||| |||  ||||||  | ||    
T  23274622 ggcaaattctacggtacactctacaatttgagtgtattggtgcaccaaatctttaaattaatagttaaaggagttattttttttagaaaaaaaaaaaatt 23274721  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  23274722 tctatcacctataattataataacta 23274747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 19718757 - 19718650
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| ||||  ||||||||||||| ||||| |||||| ||||||| ||| ||||||  ||||| ||||| ||  ||||||| ||||    
T  19718757 ggcaaattctatggtacatccaaaaatttgagtgtattagtacaccaaatcattaaattaataattaaatgtgttatattttgaagagaaaaattgtttt 19718658  T
Q  318 ctatcacc 325  Q
    ||||||||    
T  19718657 ctatcacc 19718650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 39347542 - 39347415
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||| |||||||| |||| |||| | ||  |||||||||||||||||||| |||||  |||||| ||||||||||  ||||||||||  |   |||||     
T  39347542 ttttaaggcaaattttatggtacatcaaaaaatttgagtgtattggtacattaaatcaataaattaatagttaaatgtgttatttttttaaaagaaaaaa 39347443  T
Q  312 tattttctatcacctatgattataataa 339  Q
    |||||| |||||||||| ||||||||||    
T  39347442 tattttatatcacctataattataataa 39347415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 17792229 - 17792323
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    ||||||||||| ||||||| |||| ||||||||| |||||||||| ||||| |||||| || |||| |||||||| |||||  ||| ||||||||    
T  17792229 atttgagtgtactggtacaccaaacccttaaatttatagttaaatgagttactttttgaagaaaaatattattttttatcatttataattataat 17792323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 4475046 - 4475166
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| | |||||||  ||||||||||||||||||| ||||||   ||||| ||||||||||   |||||||||| |  | |||| ||||||    
T  4475046 ggcaaattctatggt-cacccaaaaatttgagtgtattggtacaccaaatcaacaaattaatagttaaatctattattttttgaaaaataaaaatatttt 4475144  T
Q  318 ctatcacctatgattataataa 339  Q
    |||||| |||| ||||||||||    
T  4475145 ctatcatctataattataataa 4475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 43485447 - 43485342
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| ||||| |||   |||||||||||||||||||||||||  |||||| ||||||||||  ||||||||||| || |||   |||||||    
T  43485447 ggcaaattttatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttattttttgaagaaaatttttatttt 43485348  T
Q  318 ctatca 323  Q
    ||||||    
T  43485347 ctatca 43485342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 339
Target Start/End: Complemental strand, 26439931 - 26439808
Alignment:
Q  217 tggcaaattctatgatacacccaatga-tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    |||||||||||||| ||||| |||  | |||||||| ||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||    
T  26439931 tggcaaattctatggtacactcaaaaaatttgagtgcattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtt 26439832  T
Q  316 ttctatcacctatgattataataa 339  Q
    ||| ||||||||| ||||||||||    
T  26439831 ttccatcacctataattataataa 26439808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 323
Target Start/End: Original strand, 34633859 - 34633970
Alignment:
Q  214 ttatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaat 311  Q
    ||||| ||||||||||||||||||||||  |||||||||||| ||||||   | || ||||||| |||||||||| ||||  ||||||| || |||| ||    
T  34633859 ttatgacaaattctatgatacacccaatatatttgagtgtatcggtacactcactctttaaattaatagttaaatgagttgtttttttgaagaaaaatat 34633958  T
Q  312 tattttctatca 323  Q
    ||||||||||||    
T  34633959 tattttctatca 34633970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 40777022 - 40776900
Alignment:
Q  221 aaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attattttc 318  Q
    |||||||||| |||||||||   ||||||||||||| ||||||  | |  ||||||| ||||||||||||||| ||||||| |||||||| ||||||||     
T  40777022 aaattctatggtacacccaaaatatttgagtgtattcgtacattcactttttaaattaatagttaaataagttgttttttg-aggaaaaatattattttt 40776924  T
Q  319 tatcacctatgattataataacta 342  Q
    |||||  ||| |||||||||||||    
T  40776923 tatcatttataattataataacta 40776900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 4214902 - 4214776
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta-tt 315  Q
    ||||||||||||| ||||||||||  |||||||||||  |||| | | | || ||||||| |||||||||||| |||||||||| || |||| |||| ||    
T  4214902 ggcaaattctatggtacacccaatatatttgagtgtaccggtatacccactctttaaattaatagttaaataaattattttttgaagaaaaatattattt 4214803  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||  ||| |||||||||||||    
T  4214802 ttttatcatttataattataataacta 4214776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 6631312 - 6631187
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||||||||  |||||||||||  |||| | | | || ||||||| |||||||||| |||| ||||||| || |||| ||| |||    
T  6631312 ggcaaattctatggtacacccaatatatttgagtgtaccggtatacccattctttaaattaatagttaaattagttgttttttgaagaaaaatatttttt 6631213  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  6631212 tttatcatttataattataataacta 6631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 36886543 - 36886447
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||||| ||| |||||| |||||  ||||||| ||| ||||||| ||||| ||||| |   ||||||| ||||||||||||||| ||||||||||    
T  36886543 atttgagtatatcggtacaccaaattattaaattaataattaaatatgttatattttgaaaagaaaaattgttttctatcacctataattataataa 36886447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 41720241 - 41720373
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaa 309  Q
    ||||| || |||||||||| |||||||| |  |||||||||||| |||||| | | || ||||||| |||||||||| ||||  ||||||| || ||||     
T  41720241 ttttaaggtaaattctatggtacacccactatatttgagtgtatcggtacacccactctttaaattcatagttaaatgagttgtttttttgaagaaaaat 41720340  T
Q  310 attattttctatcacctatgattataataacta 342  Q
    |||||||| |||||  ||| |||||||||||||    
T  41720341 attattttttatcatttataattataataacta 41720373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 45452740 - 45452668
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    |||||||  |||||||||||||||||||||| || |||| |||||||| |||||  ||| |||||||||||||    
T  45452740 ttaaattagtagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataacta 45452668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 2749713 - 2749589
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||||||||  |||||||||||   ||||||| | || ||||||| || ||||||| |||| ||||| | || |||| |||||||    
T  2749713 ggcaaattctatggtacacccaatatatttgagtgtacctgtacatccactctttaaattaatggttaaatgagttgttttt-gaagaaaaatattattt 2749615  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||  |||  ||||||||||||    
T  2749614 tctatcatttatatttataataacta 2749589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 323
Target Start/End: Complemental strand, 29604421 - 29604314
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattat 314  Q
    |||||||||||||| ||||| ||||  ||||| ||||||||||||||||| | ||||||| ||| ||||||   || ||||||| || ||||  ||||||    
T  29604421 tggcaaattctatggtacactcaatattttgaatgtattggtacatcaaa-cattaaattaataattaaattgattgttttttgaagaaaaaataattat 29604323  T
Q  315 tttctatca 323  Q
    |||||||||    
T  29604322 tttctatca 29604314  T

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Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 15451861 - 15451729
Alignment:
Q  212 ttttatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 310  Q
    ||||| || ||||||||||||||| |||||  |||| ||||||| |||||| | | |  ||||||| |||||||||| ||||||| |||| || |||| |    
T  15451861 ttttaaggtaaattctatgatacatccaatatatttaagtgtatgggtacacctattttttaaattaatagttaaatgagttattctttgaagaaaaata 15451762  T
Q  311 tta-ttttctatcacctatgattataataacta 342  Q
    ||| |||| |||||  ||| |||||||||||||    
T  15451761 ttatttttttatcatttataattataataacta 15451729  T

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Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 13483302 - 13483188
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||| |||   |||| ||||||||| ||||||||||  |||||| |||| |||||  |||| |||||| || ||||  |||||||    
T  13483302 ggcaaattctatggtacactcaaaattttgggtgtattgggacatcaaatcaataaattaatagataaatgtgtta-tttttgaagaaaaatgttatttt 13483204  T
Q  318 ctatcacctatgatta 333  Q
    |||||| |||| ||||    
T  13483203 ctatcatctataatta 13483188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 39300495 - 39300412
Alignment:
Q  218 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 300  Q
    ||||||||||||| ||||||||||  |||||| |||| || |||||| | || ||||||| |||||||||| |||| |||||||    
T  39300495 ggcaaattctatggtacacccaatatatttgaatgtactgctacatccactctttaaattaatagttaaatgagttgttttttg 39300412  T

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Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 27171940 - 27172033
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    |||||||||||  |||||| |||| | ||||||| |||||||||| ||||| |||||| || |||| |||||||| |||||  ||| ||||||||    
T  27171940 atttgagtgtaccggtacaccaaaccgttaaatttatagttaaatgagtta-tttttgaagaaaaatattattttttatcatttataattataat 27172033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 300
Target Start/End: Original strand, 2261027 - 2261112
Alignment:
Q  216 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 300  Q
    ||||||||||||||| ||||| ||||  |||||||||||  |||||| | | || ||||||| ||| ||||||||||| |||||||    
T  2261027 atggcaaattctatggtacactcaatatatttgagtgtaccggtacacccactctttaaattaataattaaataagttgttttttg 2261112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 299
Target Start/End: Complemental strand, 5215730 - 5215646
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    ||||||||||| |||| ||||| ||||  ||||||||||| ||||||  ||| | ||||||| ||| |||||| |||| ||||||    
T  5215730 tatggcaaattttatggtacactcaatattttgagtgtatcggtacacaaaaacattaaattaataattaaattagttgtttttt 5215646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 17096687 - 17096581
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 315  Q
    ||||||||||||| |||||||||   ||||||||||| |||||| |||| | ||||||| ||| ||||||   || ||||||| || ||||  |||||||    
T  17096687 ggcaaattctatggtacacccaacattttgagtgtatcggtacaccaaa-cattaaattaataattaaattgattgttttttgaagaaaaaataattatt 17096589  T
Q  316 ttctatca 323  Q
    ||||||||    
T  17096588 ttctatca 17096581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 28897313 - 28897203
Alignment:
Q  215 tatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aat 311  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||||||| ||| || | ||||| |||  ||||| |||| ||||||  | |||||  |||    
T  28897313 tatggcaaattctatggtacacccaataaatttgggtgtattggtacaccaagtcataaaattaata-ataaatgagttgtttttttgaagaaaaataat 28897215  T
Q  312 tattttctatca 323  Q
    ||||||||||||    
T  28897214 tattttctatca 28897203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 34047825 - 34047765
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaatt 276  Q
    ||||||||||||||| |||||||||  |||||||||||  |||||| |||||  |||||||    
T  34047825 atggcaaattctatggtacacccaacaatttgagtgtaccggtacaccaaattattaaatt 34047765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 36162190 - 36162317
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat--tat 314  Q
    ||||||||||||  ||||||||||  |||||||||||   ||||||| | || ||||||| ||||||||||  ||| |||||| ||  |||||||  |||    
T  36162190 ggcaaattctatagtacacccaatatatttgagtgtaccagtacatccactctttaaattaatagttaaatgtgttgttttttttaataaaaaatattat 36162289  T
Q  315 tttctatcacctatgattataataacta 342  Q
    ||| |||||  ||| |||||||||||||    
T  36162290 tttttatcatttataattataataacta 36162317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 39721967 - 39722039
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaat 287  Q
    |||||||||||||||| ||||| |||  ||||||||||||  |||||||| ||  ||||||| ||| ||||||    
T  39721967 tatggcaaattctatggtacactcaaatatttgagtgtatccgtacatcagataattaaattaatatttaaat 39722039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 40578687 - 40578815
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 310  Q
    |||||||| |||||||||| |||| ||| |  |||| |||||||||||| |   | || ||||||| |||||||||| |||||||||||| |  || | |    
T  40578687 ttttatggtaaattctatggtacatccactatatttaagtgtattggtatactcactctttaaattcatagttaaatgagttattttttggaaaaatata 40578786  T
Q  311 ttattttctatcacctatgattataataa 339  Q
    ||||||| |||||  ||| ||||||||||    
T  40578787 ttattttttatcatttataattataataa 40578815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 42364333 - 42364209
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42364333 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaattatttt 42364234  T
Q  318 ctatcacctatgattataataacta 342  Q
    |||||||||||||||||||||||||    
T  42364233 ctatcacctatgattataataacta 42364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 38785489 - 38785364
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  38785489 tggcaaattatatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 38785390  T
Q  317 tctatcacctatgattataataacta 342  Q
    ||||||||||||||||||||||||||    
T  38785389 tctatcacctatgattataataacta 38785364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 44670670 - 44670540
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||||||||||||||| | |||||||||  |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||     
T  44670670 ttttatggcaaattctaaggtacacccaacaatttgagtgtattggtacacaaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaa 44670571  T
Q  312 tattttctatcacctatgattataataacta 342  Q
    ||||||||||||||||| |||||||||||||    
T  44670570 tattttctatcacctataattataataacta 44670540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 29347663 - 29347542
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  29347663 aaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaattattttcta 29347564  T
Q  321 tcacctatgattataataacta 342  Q
    |||||||| |||||||||||||    
T  29347563 tcacctataattataataacta 29347542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 11140247 - 11140370
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  11140247 ggcaaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgta-gaaaaaaatatttt 11140345  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  11140346 ctatcacctataattataataacta 11140370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 29787003 - 29786879
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  29787003 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 29786904  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  29786903 ctatcacctataattataataacta 29786879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 31308877 - 31309001
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||| ||  ||||||||||||||| ||| |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  31308877 ggcaaattctatggtacacctaacaatttgagtgtattggaacaccaaatccttaaattaatagttaaatgagttattttttataggaaaaaattatttt 31308976  T
Q  318 ctatcacctatgattataataacta 342  Q
    |||||||||||||||||||||||||    
T  31308977 ctatcacctatgattataataacta 31309001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 35171599 - 35171475
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  35171599 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaacccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 35171500  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  35171499 ctatcacctataattataataacta 35171475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 42067579 - 42067703
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  42067579 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 42067678  T
Q  318 ctatcacctatgattataataacta 342  Q
    | ||||||||| |||||||||||||    
T  42067679 ccatcacctataattataataacta 42067703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 876628 - 876504
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  876628 ggcaaattatatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgaaggaaaaaattatttt 876529  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  876528 ctatcacctataattataataacta 876504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 40650067 - 40650191
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||| | ||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  40650067 ggcaagttctatggtacaactaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 40650166  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  40650167 ctatcacctataattataataacta 40650191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 42848615 - 42848488
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggt--acatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||| ||||||| |||||||||  ||||||||||||||||  ||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  42848615 tggcaagttctatggtacacccaacaatttgagtgtattggtgcacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattat 42848516  T
Q  315 tttctatcacctatgattataataacta 342  Q
    |||||||||||||| |||||||||||||    
T  42848515 tttctatcacctataattataataacta 42848488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 44365621 - 44365748
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagg---aaaaaattat 314  Q
    |||||||||||||||||||||||  |||| |||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||   |||||| |||    
T  44365621 ggcaaattctatgatacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaaaaatat 44365720  T
Q  315 tttctatcacctatgattataataacta 342  Q
    |||||||||||||| |||||||||||||    
T  44365721 tttctatcacctataattataataacta 44365748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 47948801 - 47948676
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatt-ttttgtaggaaaaaattattt 316  Q
    ||||| |||||||||||||||||  |||| |||| ||||||||| |||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||    
T  47948801 ggcaagttctatgatacacccaacaatttaagtgcattggtacaccaaatccttaaattaatagttaaatgagttatttttttgtagaaaaaaattattt 47948702  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  47948701 tctatcacctataattataataacta 47948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 328
Target Start/End: Complemental strand, 27082752 - 27082641
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa-aaaattattt 316  Q
    ||||| ||||||| ||||| |||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
T  27082752 ggcaagttctatggtacactcaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaattattt 27082653  T
Q  317 tctatcacctat 328  Q
    ||||||||||||    
T  27082652 tctatcacctat 27082641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 45636089 - 45636212
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||| | |||||||||  ||||||||||||||||||| | |||  ||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  45636089 ggcaaattctagggtacacccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtaggaaaaaa-tatttt 45636187  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| || ||||||||||    
T  45636188 ctatcacctataatcataataacta 45636212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 39630297 - 39630172
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattga-tagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||| ||||  ||||||||||||| ||||| | |||  ||||||| | ||||||||| |||||||||||||||||||||| |||||    
T  39630297 ggcaaattctatggtacatccaacaatttgagtgtattagtacaccgaatttttaaattaaatagttaaatgagttattttttgtaggaaaaaaatattt 39630198  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  39630197 tctatcacctataattataataacta 39630172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 46959557 - 46959676
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||  |||||| ||  |||||||||||||||||| |||||| |||||||| |||||||||| | ||| |||||||||||||||| |||||||||    
T  46959557 aaattctatcgtacacctaacaatttgagtgtattggtacgtcaaattcttaaattaatagttaaatgaatta-tttttgtaggaaaaaa-tattttcta 46959654  T
Q  321 tcacctatgattataataacta 342  Q
    | |||||| |||||||||||||    
T  46959655 tgacctataattataataacta 46959676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 379070 - 379007
Alignment:
Q  279 tagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  379070 tagttaaatgagttattttttgtaggaaaaaattattttctatcacctataattataataacta 379007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 219 - 339
Target Start/End: Original strand, 4659757 - 4659877
Alignment:
Q  219 gcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 318  Q
    |||||||||||  || ||| ||  |||| || ||||||||||| |||||| ||||||| |||||||||| | |||  |||| ||||||||||||||||||    
T  4659757 gcaaattctatagtataccaaaaaatttaagggtattggtacaacaaatctttaaattaatagttaaatgaattacgttttttaggaaaaaattattttc 4659856  T
Q  319 tatcacctatgattataataa 339  Q
    |||||||||| ||||||||||    
T  4659857 tatcacctataattataataa 4659877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 40477759 - 40477882
Alignment:
Q  220 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 318  Q
    ||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||||||||||| || |||| ||||||||     
T  40477759 caaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattattttt 40477858  T
Q  319 tatcacctatgattataataacta 342  Q
    |||||  ||| |||||||||||||    
T  40477859 tatcatttataattataataacta 40477882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 52082435 - 52082307
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggta-------catcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 310  Q
    ||||||||||||| |||||| || ||| ||||||||||||||       ||||||||| ||||||  ||||||||||  ||||||||||| ||  |||||    
T  52082435 ggcaaattctatggtacacctaaagatatgagtgtattggtatttggtacatcaaatcattaaatcaatagttaaatgtgttattttttgaagagaaaaa 52082336  T
Q  311 ttattttctatcacctatgattataataa 339  Q
    |||||||||||||||||| ||||||||||    
T  52082335 ttattttctatcacctataattataataa 52082307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 9506903 - 9507028
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||||||||||||||  ||||||||| || |||||| ||| || ||||||| |||||||||| |||| ||||||| |  |||| |||||||    
T  9506903 ggcaaattctatgatacacccaatatatttgagtgcatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaaaaaaaatattattt 9507002  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  9507003 tttatcatttataattataataacta 9507028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 9514878 - 9515003
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||||||||||||||  ||||||||| || |||||| ||| || ||||||| |||||||||| |||| ||||||| |  |||| |||||||    
T  9514878 ggcaaattctatgatacacccaatatatttgagtgcatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaaaaaaaatattattt 9514977  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  9514978 tttatcatttataattataataacta 9515003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 23456454 - 23456579
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||  ||||||||||  |||||||||||| |||||||| | || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  23456454 ggcaaattctatattacacccaatatatttgagtgtatcggtacatccactctttaaattaatagttaaatgagtttttttttgaagaaaaatattattt 23456553  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  23456554 tttatcatttattattataataacta 23456579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 26885378 - 26885253
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||| |||| ||||||||||  |||||||||||| |||||| ||| || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  26885378 ggcaaattttatggtacacccaatatatttgagtgtatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 26885279  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  26885278 tttatcatttataattataataacta 26885253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 27647478 - 27647599
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  27647478 ggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 27647577  T
Q  318 ctatcacctatgattataataa 339  Q
    | ||||||||| ||||||||||    
T  27647578 ccatcacctataattataataa 27647599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 339
Target Start/End: Complemental strand, 43715156 - 43715033
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||||||||| |||| ||||  ||||| ||||||||||||| ||||||  |||| | |||||||||    |||||||||| ||  ||||||| ||    
T  43715156 atggcaaattctatggtacatccaaaaatttgggtgtattggtacaccaaatcaataaactaatagttaaacgtattattttttgaagagaaaaattgtt 43715057  T
Q  316 ttctatcacctatgattataataa 339  Q
    ||||||||||||| ||||||||||    
T  43715056 ttctatcacctataattataataa 43715033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 21289219 - 21289098
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||| |||  |||||||||||| |||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  21289219 ggcaaattctatggtacactcaaaaatttgagtgtataggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 21289120  T
Q  318 ctatcacctatgattataataa 339  Q
    | ||||||||| ||||||||||    
T  21289119 ccatcacctataattataataa 21289098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 4663549 - 4663429
Alignment:
Q  213 tttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatt 312  Q
    |||| ||||| ||||||| ||||| |||   |||||||||||||||||||||||||  |||||| ||||||||||  ||||||||||| || |||   ||    
T  4663549 tttaaggcaagttctatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttattttttgaagaaaattttt 4663450  T
Q  313 attttctatcacctatgatta 333  Q
    ||||||||||| |||| ||||    
T  4663449 attttctatcatctataatta 4663429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 53516990 - 53516866
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| |||||  ||  ||||||||||||||||||| | ||||   ||||| ||||||||||   |||||||||| ||  ||||||| |    
T  53516990 tatggcaaattctatggtacacttaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtattattttttgaagagaaaaattgt 53516891  T
Q  315 tttctatcacctatgattataataa 339  Q
    |||| ||||||||| ||||||||||    
T  53516890 tttccatcacctataattataataa 53516866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 51344376 - 51344499
Alignment:
Q  220 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 318  Q
    ||||||||| ||||||||||||  |||||||||||  ||||||   | || ||||||| ||||||||||||||| ||||||| || |||| ||||||||     
T  51344376 caaattctacgatacacccaatatatttgagtgtacaggtacacacattctttaaattaatagttaaataagttgttttttgaagcaaaatattattttt 51344475  T
Q  319 tatcacctatgattataataacta 342  Q
    |||||  ||| |||||||||||||    
T  51344476 tatcatttataattataataacta 51344499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 27079785 - 27079711
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt 292  Q
    ||||| ||||||| ||||| |||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  27079785 ggcaagttctatggtacactcaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagtt 27079711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 33006298 - 33006424
Alignment:
Q  217 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||| |||| ||||||||||| |||||||||||  |||||| | | |  ||||||| |||||||||| |||| ||||||| || |||| ||||||    
T  33006298 tggcaaattttatgctacacccaatgtatttgagtgtacaggtacacccactttttaaattaatagttaaatgagttgttttttgaagaaaaatattatt 33006397  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||  ||| |||||||||||||    
T  33006398 ttttatcatttattattataataacta 33006424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 337
Target Start/End: Complemental strand, 45636062 - 45635968
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    |||||||||||  |||| | |||| ||||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  45636062 atttgagtgtaccggtataccaaacccttaaatttatagttaaataagttattttttgaagaaaaatattattttttatcatttataattataat 45635968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 42622256 - 42622136
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 315  Q
    |||||||| |||| ||||||||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  42622256 ggcaaattttatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttg-aggaaaaatattatt 42622158  T
Q  316 ttctatcacctatgattataat 337  Q
    || |||||  ||| ||||||||    
T  42622157 ttttatcatttataattataat 42622136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 44522023 - 44522147
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||  ||||  ||||||||||||||||||||  | || ||||||| |||||||||| |||||||||||  || |||| |||||||    
T  44522023 ggcaaattctatggtacattcaatatatttgagtgtattggtacattcactctttaaattaatagttaaatgagttatttttt-aagaaaaatattattt 44522121  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||  |||  ||||||||||||    
T  44522122 tctatcatttatatttataataacta 44522147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 339
Target Start/End: Original strand, 3136295 - 3136391
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||| ||||||||||||| ||||||  |||||| ||||||||||  ||||||||||  ||  ||||||| |||| |||||||||| ||||||||||    
T  3136295 atttgggtgtattggtacaccaaatcaataaattaatagttaaatgtgttatttttttaagagaaaaattgttttatatcacctataattataataa 3136391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 25592413 - 25592297
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||| |||| |||| ||||  |||||||||||||| |||| ||||||  |||||| |||||| |||  ||||||||||| ||  ||||||| |||    
T  25592413 tggcaaattatatggtacatccaaaaatttgagtgtattgatacaccaaatcaataaattaatagtttaatgtgttattttttgaagagaaaaattgttt 25592314  T
Q  317 tctatcacctatgatta 333  Q
    |||||||| ||| ||||    
T  25592313 tctatcacatataatta 25592297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 37491992 - 37492040
Alignment:
Q  294 ttttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  37491992 ttttttgtatgaaaaaattattttctatcacctataattataataacta 37492040  T

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Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 45290796 - 45290856
Alignment:
Q  282 ttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||  |||||||||||||    
T  45290796 ttaaataagttattttttgaaggaaaaaattattttctaatacctagaattataataacta 45290856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 45538998 - 45538926
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||| |||||||||||||    
T  45538998 ttaaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataacta 45538926  T

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Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 335
Target Start/End: Original strand, 19547487 - 19547606
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||||||||| |||| ||||  |||||||||||| |||||| | ||||   ||||| ||||||||||  ||||||||||| ||  | ||||| ||    
T  19547487 atggcaaattctatggtacatccaaaaatttgagtgtatcggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagataaattgtt 19547586  T
Q  316 ttctatcacctatgattata 335  Q
    ||| ||||||||| ||||||    
T  19547587 ttccatcacctataattata 19547606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 299
Target Start/End: Original strand, 29491658 - 29491745
Alignment:
Q  213 tttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    |||| ||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||||||||||    
T  29491658 tttaaggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttatttttt 29491745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 32636626 - 32636752
Alignment:
Q  218 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatt-att 315  Q
    ||||||||||||| ||||||||||  |||||||||||  | ||||   | |||||||||| |||||||||| |||| |||||||||| |||| |||  ||    
T  32636626 ggcaaattctatggtacacccaatatatttgagtgtaccgatacactcactccttaaattaatagttaaatgagttgttttttgtagaaaaatattgttt 32636725  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||| ||| |||||||||||||    
T  32636726 ttttatcacttataattataataacta 32636752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 337
Target Start/End: Complemental strand, 50030132 - 50030038
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    |||||||||||  |||| | |||| ||||||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  50030132 atttgagtgtacaggtataccaaacccttaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 50030038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 339
Target Start/End: Original strand, 15996821 - 15996942
Alignment:
Q  219 gcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||||||| ||||||||||  |||| ||||||  |||||||| | |  ||||||| |||||||||| |||| ||||||| || |||| ||||||||    
T  15996821 gcaaattctatggtacacccaatatatttaagtgtaccggtacatctattttttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 15996920  T
Q  318 ctatcacctatgattataataa 339  Q
     |||||  ||| ||||||||||    
T  15996921 ttatcatttataattataataa 15996942  T

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Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 314
Target Start/End: Complemental strand, 16137029 - 16136932
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    ||||||||||||| |||| |||||  |||||||||||| |||||||| | || ||||||| |||||||||||| || ||||||| || |||| |||||    
T  16137029 ggcaaattctatggtacatccaatatatttgagtgtatcggtacatccactctttaaattaatagttaaataaattgttttttgaagaaaaatattat 16136932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 41282939 - 41282815
Alignment:
Q  220 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta-tttt 317  Q
    |||||| ||||||||| |||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||| ||||    
T  41282939 caaattttatgatacatccaatatatttgagtgtaccggtacacctattctttaaattaatagttaaataagttgttttttgaagaaaaatattattttt 41282840  T
Q  318 ctatcacctatgattataataacta 342  Q
     |||||  ||| |||||||||||||    
T  41282839 ttatcatttataattataataacta 41282815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 298
Target Start/End: Original strand, 40021077 - 40021160
Alignment:
Q  216 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttt 298  Q
    ||||||||||||||| |||| |||||  ||||||||||| ||||||||| | || ||||||| |||||||||| |||| |||||    
T  40021077 atggcaaattctatggtacatccaatatatttgagtgtactggtacatccactctttaaattaatagttaaatgagttgttttt 40021160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 1129532 - 1129411
Alignment:
Q  221 aaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    |||||||||| ||||| ||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| ||| |||| |    
T  1129532 aaattctatggtacactcaatacatttgagtgtaccggtacacccactctttaaattaatagttaaataagttgttttttgaagaaaaatatt-tttttt 1129434  T
Q  320 atcacctatgattataataacta 342  Q
    ||||  ||| |||||||||||||    
T  1129433 atcatttataattataataacta 1129411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 7352579 - 7352449
Alignment:
Q  213 tttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    |||| ||||||||||||| |||| ||| |  |||||||||||| ||||||   | || ||||||| |||||||||| |||||||||||| |  || | ||    
T  7352579 tttaaggcaaattctatggtacatccactatatttgagtgtatcggtacactcactcattaaatttatagttaaatgagttattttttgaaaaaatatat 7352480  T
Q  312 tattttctatcacctatgattataataacta 342  Q
    |||||| |||||  ||| |||||||||||||    
T  7352479 tattttttatcatttataattataataacta 7352449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 31479559 - 31479656
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattatttt 317  Q
    ||||| |||| |||||| ||  |||||||||||| |||||| |||||  ||||||| ||| |||||| |||| |||||||||| |||| |||||||||    
T  31479559 aaattatatggtacacctaaaaatttgagtgtatcggtacaccaaattgttaaattaataattaaatgagtttttttttgtagaaaaataattatttt 31479656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 40473887 - 40473960
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaa-attattttctatcacctatgattataataacta 342  Q
    ||||||| ||||||||||||||||| ||||| || ||||| |||||||| |||||  ||| |||||||||||||    
T  40473887 ttaaattaatagttaaataagttatcttttgaagaaaaaatattattttttatcatttataattataataacta 40473960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 379277 - 379225
Alignment:
Q  224 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaatt 276  Q
    ||||||| |||||||||  |||| |||||||||||||| ||||||||||||||    
T  379277 ttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaatt 379225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 339
Target Start/End: Original strand, 32717678 - 32717774
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||||||||||  ||||  |||||  |||||| ||||||||||   ||||||| || ||  ||||||| ||||||||||||||| ||||||||||    
T  32717678 atttgagtgtattaatacactaaatcaataaattaatagttaaatgtattattttctgaagagaaaaattgttttctatcacctataattataataa 32717774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 34593718 - 34593774
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    |||||||||||||| |||| |||||| ||||||| |||||||||| | |||||||||    
T  34593718 atttgagtgtattgttacaccaaatctttaaattaatagttaaattaattatttttt 34593774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 7671806 - 7671885
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 300  Q
    |||||||||| |||||||||  ||||||||||||||||||| | |||    ||||| ||||||||||  |||||||||||    
T  7671806 aaattctatggtacacccaaaaatttgagtgtattggtacacccaataaacaaattaatagttaaatgtgttattttttg 7671885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 8965941 - 8965996
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttt 298  Q
    ||||||||||| ||||||| || ||||||||||| |||||||||| | ||||||||    
T  8965941 atttgagtgtactggtacaccagatccttaaatttatagttaaatgaattattttt 8965996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 43745754 - 43745628
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-atta-t 314  Q
    ||||||||||||| ||||| ||||  |||||||| ||  |||||| | | || ||||||| ||||||||||||||| ||||||| |||||||| |||| |    
T  43745754 ggcaaattctatggtacactcaatatatttgagtataccggtacacccactctttaaattaatagttaaataagttgttttttg-aggaaaaatattatt 43745656  T
Q  315 tttctatcacctatgattataataacta 342  Q
    ||| |||||  ||| |||||||||||||    
T  43745655 tttttatcatttataattataataacta 43745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 50412480 - 50412353
Alignment:
Q  217 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attat 314  Q
    |||||||||||||| ||||||||||  |||||||||||  |||||||  | |  ||||||| || ||||||| |||| ||||||  | |||||| |||||    
T  50412480 tggcaaattctatggtacacccaatatatttgagtgtaccggtacatttactttttaaattaatggttaaatgagttgtttttttgaagaaaaatattat 50412381  T
Q  315 tttctatcacctatgattataataacta 342  Q
    |||||||||  |||  ||||||||||||    
T  50412380 tttctatcatttatatttataataacta 50412353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 25482624 - 25482550
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||||||| |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| ||||||||    
T  25482624 atttgagtgtatcggtacacctattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 25482550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 28718333 - 28718227
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaattattt 316  Q
    ||||||||||||| |||||||||   ||||||||||  ||| || |||| | ||||||| ||| |||||| |||| ||||||| ||  ||||||| ||||    
T  28718333 ggcaaattctatggtacacccaaaattttgagtgtaccggtgcaccaaacctttaaattaataattaaattagttgttttttgaagaaaaaaaatcattt 28718234  T
Q  317 tctatca 323  Q
    |||||||    
T  28718233 tctatca 28718227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 54262894 - 54262840
Alignment:
Q  263 caaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||| ||||||||| |||||||||| |||||||||||| || |||| ||||||||    
T  54262894 caaacccttaaatttatagttaaatgagttattttttgaagaaaaatattatttt 54262840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 5532454 - 5532345
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aatta 313  Q
    |||| ||||||||||| |||| | ||  |||||||||||  |||||| |||||  ||||||| ||| |||| | |||| ||||||| || |||| |||||    
T  5532454 tatgacaaattctatggtacatctaaatatttgagtgtaccggtacaccaaataattaaattaatatttaattgagtttttttttgaagaaaaagaatta 5532355  T
Q  314 ttttctatca 323  Q
    ||||||||||    
T  5532354 ttttctatca 5532345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 25834284 - 25834353
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||||| ||||||||||||||| ||||||| |  |||| |||||||| |||||  ||| ||||||||||    
T  25834284 ttaaattaatagttaaataagttgttttttgaaaaaaaatattattttttatcatttataattataataa 25834353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 40727702 - 40727630
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaa-attattttctatcacctatgattataataacta 342  Q
    ||||||| ||| ||||||||||| ||||||| |||||||| |||||||| |||||  ||| |||||||||||||    
T  40727702 ttaaattaataattaaataagttgttttttg-aggaaaaatattattttttatcatttataattataataacta 40727630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 43388496 - 43388423
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataactat 343  Q
    ||||||| |||||| ||| | ||||||||| ||| |||||| ||||||||||||  ||  ||||||||||||||    
T  43388496 ttaaattaatagtttaatgaattattttttttagaaaaaaaatattttctatcatttacaattataataactat 43388423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 8433437 - 8433537
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||| | |||||||||   |||||||||||  |||||| |||| ||||||| | |||||||||| ||||  |||||| || |||| |||||||    
T  8433437 ggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaacccttaaaattatagttaaatgagttggtttttgaagaaaaatattattt 8433536  T
Q  317 t 317  Q
    |    
T  8433537 t 8433537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 337
Target Start/End: Original strand, 52162436 - 52162515
Alignment:
Q  257 gtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    ||||| |||| | ||||||| |||||||||| |||||||||||  || |||| |||||||| ||||  |||||||||||||    
T  52162436 gtacaccaaacctttaaatttatagttaaatgagttatttttttaagaaaaatattattttttatc-tctatgattataat 52162515  T

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Target: chr5 (Bit Score: 103; Significance: 5e-51; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 6560828 - 6560950
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  6560828 caaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattttct 6560927  T
Q  320 atcacctatgattataataacta 342  Q
    |||||||||||||||||||||||    
T  6560928 atcacctatgattataataacta 6560950  T

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Target: chr5; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 43237760 - 43237635
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| |||||    
T  43237760 tggcaaattctatggtacacccaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaatattt 43237661  T
Q  317 tctatcacctatgattataataacta 342  Q
    ||||||||||||||||||||||||||    
T  43237660 tctatcacctatgattataataacta 43237635  T

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Target: chr5; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 34302646 - 34302772
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta--ttttttgtaggaaaaaattatt 315  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||    
T  34302646 ggcaaattctatggtacacccaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttttgtaggaaaaaattatt 34302745  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || ||||||||||||||||||||||||    
T  34302746 ttttatcacctatgattataataacta 34302772  T

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Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 6532579 - 6532703
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  |||| |||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  6532579 ggcaaattctatggtacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 6532678  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  6532679 ctatcacctataattataataacta 6532703  T

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Target: chr5; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 1662100 - 1661976
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  |||||||||||||||||||  ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  1662100 ggcaagttctatggtacacccaacaatttgagtgtattggtacacaaaatccttaaattaatagttaaatgggttattttttgtaggaaaaaattatttt 1662001  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  1662000 ctatcacctataattataataacta 1661976  T

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Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 2141242 - 2141366
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| || |||| || ||||||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  2141242 ggcaagttttatggtagacccaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 2141341  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  2141342 ctatcacctataattataataacta 2141366  T

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Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 2029352 - 2029477
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||| ||| |||| | ||  |||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  2029352 tggcaaattccatggtacatctaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 2029451  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  2029452 tctatcacctataattataataacta 2029477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 219 - 342
Target Start/End: Original strand, 3056386 - 3056509
Alignment:
Q  219 gcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 318  Q
    |||| ||||||| |||||||||  |||| |||||||||||||| |||||  ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  3056386 gcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatttttaaattaatagttaaatgagttattttttgtaggaaaaaattattttc 3056485  T
Q  319 tatcacctatgattataataacta 342  Q
    |||||||||| |||||||||||||    
T  3056486 tatcacctataattataataacta 3056509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 21605645 - 21605772
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||| ||||||||||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||| |||||||||| |||    
T  21605645 tatgacaaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttataggaaaaaaatat 21605744  T
Q  315 tttctatcacctatgattataataacta 342  Q
    |||| ||||||||| |||||||||||||    
T  21605745 tttccatcacctataattataataacta 21605772  T

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Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 24097873 - 24097995
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| || ||||||| ||||||||||| ||||||| |||||  ||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  24097873 caaattctatggtaaacccaatcatttgagtgtaatggtacaccaaattattaaattaatagttcaatgagttattttttgtaggaaaaaattattttct 24097972  T
Q  320 atcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||    
T  24097973 atcacctataattataataacta 24097995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 9589209 - 9589330
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||||||| ||| |||||||||||| ||| |||||| ||||||| ||||||||||| ||||||||||| || |||||||||||||    
T  9589209 ggcaaattctatggtacacccaaagatatgagtgtattggcacaccaaatcattaaattaatagttaaatatgttattttttgaagaaaaaaattatttt 9589308  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  9589309 ctatcacctataattataataa 9589330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 32467046 - 32467167
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    ||||| |||| ||||| |||| |||| ||||||||||||||||||||| ||||||| |||||| ||| | ||||||||||||||||||||||||||||||    
T  32467046 aaattatatggtacactcaatcatttaagtgtattggtacatcaaatcattaaattaatagttcaatgaattattttttgtaggaaaaaattattttcta 32467145  T
Q  321 tcacctatgattataataacta 342  Q
    |||||||| |||||||||||||    
T  32467146 tcacctataattataataacta 32467167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 6114180 - 6114056
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| ||||  |||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  6114180 ggcaaattctatggtacatccaacaatttgagtgtattggtccaccaaatccttaaattaatagttaaatgagttattttttgtagaaaaaaaatatttt 6114081  T
Q  318 ctatcacctatgattataataacta 342  Q
    | ||||||||| |||||||||||||    
T  6114080 ccatcacctataattataataacta 6114056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 18228859 - 18228741
Alignment:
Q  224 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 323  Q
    ||||||| |||||| ||  ||||||||||||||||| | |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  18228859 ttctatggtacacctaacaatttgagtgtattggtataccaaatccttaaattaatagttaaatgagttattttttgtgggaaaaaattattttctatca 18228760  T
Q  324 cctatgattataataacta 342  Q
    ||| | |||||||||||||    
T  18228759 cctgtaattataataacta 18228741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 42917117 - 42917242
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat-tattt 316  Q
    ||||||||||||| | |||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| ||||| ||||||||| ||||||| |||||    
T  42917117 ggcaaattctatggtgcacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttactttttgtagaaaaaaatatattt 42917216  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  42917217 tctatcacctataattataataacta 42917242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 9534868 - 9534991
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||| ||||||| || || |||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||   |||||||||||||||    
T  9534868 atggcaagttctatggtagactcaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatttt---taggaaaaaattatt 9534964  T
Q  316 ttctatcacctatgattataataacta 342  Q
    ||||||||||||| |||||||||||||    
T  9534965 ttctatcacctataattataataacta 9534991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 2413927 - 2414048
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| || || |||| ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||   |||||||||||||||||    
T  2413927 ggcaagttctatggtagactcaataatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttatttt---taggaaaaaattatttt 2414023  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  2414024 ctatcacctataattataataacta 2414048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 13410545 - 13410665
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    ||||| |||| |||| ||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||| |    
T  13410545 aaattttatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaa-tattttcca 13410643  T
Q  321 tcacctatgattataataacta 342  Q
    |||||||| |||||||||||||    
T  13410644 tcacctataattataataacta 13410665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 4618124 - 4617997
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||| |||||||| |||| |||||| ||  ||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||  ||||||    
T  4618124 ttttaaggcaaattttatggtacacctaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaat 4618025  T
Q  312 tattttctatcacctatgattataataa 339  Q
    ||||||||||||||||| ||||||||||    
T  4618024 tattttctatcacctataattataataa 4617997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 221 - 339
Target Start/End: Original strand, 13090917 - 13091035
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||| ||||||||| ||| |||||||||||||||| |||||  ||||||| ||||||||||  ||||||||||| ||  ||||||| |||||||    
T  13090917 aaattctatggtacacccaaagatatgagtgtattggtacaccaaattattaaattaatagttaaatgtgttattttttgaagagaaaaattgttttcta 13091016  T
Q  321 tcacctatgattataataa 339  Q
    |||||||| ||||||||||    
T  13091017 tcacctataattataataa 13091035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 41802106 - 41802227
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| || | ||||||||| | || ||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| ||  ||||||||||||    
T  41802106 ggcaaattttacggtacacccaaaggttcgagtgtattggtacaccaaatcattaaattaatagttaaatatgttattttttgaagagaaaaattatttt 41802205  T
Q  318 ctatcacctatgattataataa 339  Q
    |||||| |||| ||||||||||    
T  41802206 ctatcatctataattataataa 41802227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 36752620 - 36752491
Alignment:
Q  214 ttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatt-ttttgtaggaaaaaatt 312  Q
    ||||||||||||| | | |||| ||||  ||||||||||| ||||| |  ||||||||||||| |||||||||| | ||||| ||||||||||||||| |    
T  36752620 ttatggcaaattccacggtacatccaacaatttgagtgtagtggtatacaaaatccttaaattaatagttaaatgaattattattttgtaggaaaaaaat 36752521  T
Q  313 attttctatcacctatgattataataacta 342  Q
    |||||| ||||||||| |||||||||||||    
T  36752520 attttccatcacctataattataataacta 36752491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 339
Target Start/End: Original strand, 14967235 - 14967353
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||| ||||||||| ||| ||||||||||||||||  ||||| |||||||  |||||||||  ||||||||||  ||  ||||||| |||||||    
T  14967235 aaattctatggtacacccaaagatatgagtgtattggtacactaaatcattaaattagtagttaaatgtgttattttttaaagagaaaaattgttttcta 14967334  T
Q  321 tcacctatgattataataa 339  Q
    |||||||| ||||||||||    
T  14967335 tcacctataattataataa 14967353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 29743895 - 29744020
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaa-ttgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||| |||| ||||  |||  |||| |||||||||||||| |||||||||||| || | ||||||||  ||||||||||| || ||||||||||||    
T  29743895 ggcaaattatatggtacattcaaaaatttaagtgtattggtacaccaaatccttaaaattaagagttaaatgtgttattttttgaagaaaaaaattattt 29743994  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||  |||||||||||||    
T  29743995 tctatcacctaaaattataataacta 29744020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 21051711 - 21051586
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||| | || ||||||| |||||||||||| ||||||  |||||| ||||||||||  ||||||||||| ||  ||||||| ||     
T  21051711 tggcaaattctatggtacatctaaagatttgaatgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttg 21051612  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| ||| | |||||||    
T  21051611 tctatcacctataattgtgataacta 21051586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 35817729 - 35817644
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctat 328  Q
    |||||||||||||| |||| ||||   ||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  35817729 atttgagtgtattgatacaccaaaattttaaattaatagttaaatgagttattttttgaagaaaaaaattattttctatcacctat 35817644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 28332119 - 28332242
Alignment:
Q  217 tggcaaattctatgatacacccaatga-tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    |||||||||||||| ||||| |||  | |||||||||||||||||| ||||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||    
T  28332119 tggcaaattctatggtacactcaaaaaatttgagtgtattggtacaccaaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtt 28332218  T
Q  316 ttctatcacctatgattataataa 339  Q
    ||| ||||||||| ||||||||||    
T  28332219 ttccatcacctataattataataa 28332242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 339
Target Start/End: Complemental strand, 12362765 - 12362643
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| ||||| |||  |||| |||||||||||||| | ||||  |||||| ||||||||||   |||||||||| ||  ||||||| |||    
T  12362765 tggcaaattctatggtacactcaaaaatttaagtgtattggtacacccaatcaataaattaatagttaaatgtcttattttttgaagagaaaaattgttt 12362666  T
Q  317 tctatcacctatgattataataa 339  Q
    || ||||||||| ||||||||||    
T  12362665 tccatcacctataattataataa 12362643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 339
Target Start/End: Original strand, 27116465 - 27116583
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    ||||| |||| |||||||||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||| |    
T  27116465 aaattttatggtacacccaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttcca 27116564  T
Q  321 tcacctatgattataataa 339  Q
    |||||||| ||||||||||    
T  27116565 tcacctataattataataa 27116583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 37431744 - 37431633
Alignment:
Q  232 tacacccaatgatttgagtgtattggtacatcaaatcctt---aaattgatagttaaataagttattttttgtag-gaaaaaattattttctatcaccta 327  Q
    ||||| ||| |||||||||||||||||||| ||||||  |   ||||| ||||||||||  ||||||||||| || ||||||||| |||||| |||||||    
T  37431744 tacactcaaagatttgagtgtattggtacaccaaatcaattataaattaatagttaaatgtgttattttttgaagagaaaaaattgttttctttcaccta 37431645  T
Q  328 tgattataataa 339  Q
    ||||||||||||    
T  37431644 tgattataataa 37431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 216 - 339
Target Start/End: Complemental strand, 13795678 - 13795555
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    |||| |||||||||| |||| | ||  ||||||||| ||||||||| | ||||  |||||| ||||||||||  ||||||||||| ||  ||||| ||||    
T  13795678 atggtaaattctatggtacatcaaaaaatttgagtgcattggtacacctaatcaataaattaatagttaaatgtgttattttttgaagagaaaaaatatt 13795579  T
Q  316 ttctatcacctatgattataataa 339  Q
    || |||||||||| ||||||||||    
T  13795578 ttatatcacctataattataataa 13795555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 13118854 - 13118926
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||| |||||||||||||    
T  13118854 ttaaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataacta 13118926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 42486959 - 42486887
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||| |||||||||||||    
T  42486959 ttaaattaatagttaaataagttattttttgaagaaaaatattattttatatcatttataattataataacta 42486887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 337
Target Start/End: Complemental strand, 13645889 - 13645795
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    |||||||||||  ||||||||||| | | ||||| |||||||||| |||| ||||||| || |||| |||||||| |||||  ||||||||||||    
T  13645889 atttgagtgtaccggtacatcaaaccttaaaatttatagttaaatgagttgttttttgaagaaaaatattattttttatcatttatgattataat 13645795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 32455328 - 32455422
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    |||||||||||  |||||||||||  ||||| || |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  32455328 atttgagtgtaccggtacatcaaactcttaagtttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 32455422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 337
Target Start/End: Complemental strand, 38355097 - 38355003
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    ||||||||||| ||||||| ||||  |||||||| |||||||||| |||||||||||| |  |||| |||||||| |||||  ||| ||||||||    
T  38355097 atttgagtgtactggtacaccaaactcttaaatttatagttaaatgagttattttttgaacaaaaatattattttttatcatttataattataat 38355003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 323
Target Start/End: Complemental strand, 14096798 - 14096705
Alignment:
Q  230 gatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 323  Q
    ||||||| |||  |||||||||||||| |||| |||||  ||||||| ||| | ||||||||||||||||| || ||| ||||||||| |||||    
T  14096798 gatacacacaaaaatttgagtgtattgatacaccaaattgttaaattaataatcaaataagttattttttgaagaaaagaattattttttatca 14096705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 2318807 - 2318715
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattata 335  Q
    ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||| ||||||||| ||||||    
T  2318807 atttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttccatcacctataattata 2318715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 299
Target Start/End: Original strand, 25929554 - 25929642
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    |||| |||||||||||||| ||||||||||  |||||||||||  |||| | | | || ||||||| ||||||||||||||||||||||    
T  25929554 ttttttggcaaattctatggtacacccaatatatttgagtgtacgggtatacccactctttaaattaatagttaaataagttatttttt 25929642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 342
Target Start/End: Original strand, 35682122 - 35682217
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||||||||||||||| || ||||||||||| || ||||||| ||||| |||||    |||||||  |  || |||||||||| |||||||||||||    
T  35682122 atttgagtgtattggtacaccatatccttaaattaattgttaaatgagttacttttt----gaaaaaaaaaaattatatcacctataattataataacta 35682217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 333
Target Start/End: Complemental strand, 3425481 - 3425369
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||||||||| |||   |||| |||||||||||||||||||   |||||| |||| |||||  |||| |||||| || ||||  |||||||||    
T  3425481 caaattctatgatacactcaaaattttgggtgtattggtacatcaaattaataaattaatagataaatgtgtta-tttttgaagaaaaatgttattttct 3425383  T
Q  320 atcacctatgatta 333  Q
    |||| |||| ||||    
T  3425382 atcatctataatta 3425369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 22780590 - 22780638
Alignment:
Q  294 ttttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    |||||||||||||||||| |||||||||||||| | |||||| ||||||    
T  22780590 ttttttgtaggaaaaaataattttctatcacctgtaattatagtaacta 22780638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 323
Target Start/End: Original strand, 3881864 - 3881938
Alignment:
Q  249 gtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattattttctatca 323  Q
    ||||||||||||| |||||| | ||||| ||| | ||||||||||||||||| || |||| |||||||||||||||    
T  3881864 gtgtattggtacaccaaatcataaaattaataat-aaataagttattttttgaagaaaaataattattttctatca 3881938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 323
Target Start/End: Complemental strand, 23259149 - 23259046
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaattattttct 319  Q
    ||||| |||| |||||| ||  ||||||||||||  |||||||||||  ||||||| ||| |||||| ||||  ||||||| || ||| |||||||||||    
T  23259149 aaattttatggtacacctaagtatttgagtgtatctgtacatcaaataattaaattaatatttaaatgagttgtttttttgaagaaaagaattattttct 23259050  T
Q  320 atca 323  Q
    ||||    
T  23259049 atca 23259046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 29996509 - 29996592
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 300  Q
    |||||||||||||| |||| ||||  || ||||||||| | ||||||||||| ||||||  ||| |||||| |||| |||||||    
T  29996509 tggcaaattctatggtacatccaaaaatatgagtgtatcgttacatcaaatcgttaaatcaataattaaatgagttgttttttg 29996592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 33210372 - 33210495
Alignment:
Q  220 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 318  Q
    ||||||||||| ||||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| | ||||| || |||| |||||||||    
T  33210372 caaattctatggtacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgagttgtcttttgaagaaaaatattattttc 33210471  T
Q  319 tatcacctatgattataataacta 342  Q
    |||||  |||  ||||||||||||    
T  33210472 tatcatttatatttataataacta 33210495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 33145264 - 33145210
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaa 274  Q
    ||||||||||| |||||||||  || |||||||||||||||| |||||| |||||    
T  33145264 caaattctatggtacacccaaaaatatgagtgtattggtacaccaaatcattaaa 33145210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 36339255 - 36339127
Alignment:
Q  216 atggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa--att 312  Q
    ||||||||||||||| ||||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||| ||||||||  |||    
T  36339255 atggcaaattctatggtacacccaatatatttgagtgtaccggtacactcattctttaaattaatggttaaatgagttgttttttg-aggaaaaaatatt 36339157  T
Q  313 attttctatcacctatgattataataacta 342  Q
    ||||| |||||  |||  ||||||||||||    
T  36339156 attttttatcatttatatttataataacta 36339127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 328
Target Start/End: Original strand, 36880818 - 36880896
Alignment:
Q  250 tgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctat 328  Q
    |||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||||||||| |||||||||    
T  36880818 tgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattattttccatcacctat 36880896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 16433057 - 16432976
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    |||||||| |||| |||| ||||| |||||||||||   ||||| ||||||||||| || ||| |||||| |||| ||||||    
T  16433057 ggcaaattttatggtacatccaattatttgagtgtaccagtacaccaaatccttaatttaataattaaatgagttgtttttt 16432976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 29959879 - 29960004
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||||| |||  ||||||||||||  |||||   | || ||||||| || ||||||| |||| | ||||| || |||| |||||||    
T  29959879 ggcaaattctatggtacacctaatatatttgagtgtatcagtacactcactctttaaattaatggttaaatgagttgtattttgaagaaaaatattattt 29959978  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||  |||  ||||||||||||    
T  29959979 tctatcatttatatttataataacta 29960004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 324
Target Start/End: Original strand, 39979368 - 39979476
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 315  Q
    |||||||||||||||||| | |||  |||||||||| || | ||||||| | | ||||| |||  ||||| |||| ||||||| || ||||  |||||||    
T  39979368 ggcaaattctatgatacatctaatattttgagtgtactgctccatcaaagcatcaaattaataagtaaattagttgttttttgaagaaaaaataattatt 39979467  T
Q  316 ttctatcac 324  Q
    |||||||||    
T  39979468 ttctatcac 39979476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 33678155 - 33678255
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||||||| |  |||||||||||  ||||||   | || ||||||| |||||||||| |||||||||||| |  |||| |||||||    
T  33678155 ggcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgagttattttttgaaaaaaaatattattt 33678254  T
Q  317 t 317  Q
    |    
T  33678255 t 33678255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 36428311 - 36428187
Alignment:
Q  221 aaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg-taggaaaaaatta-tttt 317  Q
    |||||||||| |||| |||||  |||||||||||  |||||||| | || ||||| | |||||||||| |||| ||||||| ||  ||||||||| ||||    
T  36428311 aaattctatggtacatccaatatatttgagtgtaccggtacatccactctttaaactaatagttaaatgagttgttttttgataaaaaaaaattattttt 36428212  T
Q  318 ctatcacctatgattataataacta 342  Q
     |||||  ||| |||||||||||||    
T  36428211 ttatcatttataattataataacta 36428187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 39041707 - 39041667
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagtt 283  Q
    |||||||||||||||||||  ||||||||||||| ||||||    
T  39041707 atttgagtgtattggtacactaaatccttaaatttatagtt 39041667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 5e-51; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 51984936 - 51985058
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  51984936 caaattctatggtacactcaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattttct 51985035  T
Q  320 atcacctatgattataataacta 342  Q
    |||||||||||||||||||||||    
T  51985036 atcacctatgattataataacta 51985058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 51781507 - 51781386
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  51781507 aaattctatggtacacccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattttcta 51781408  T
Q  321 tcacctatgattataataacta 342  Q
    ||||||||||||||||||||||    
T  51781407 tcacctatgattataataacta 51781386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 52303013 - 52303137
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  52303013 ggcaaattctatgatacacccaataatttgagtgtattggtacatcaaattcttaaattaatagttaaatgagttattttttataggaaaaaaatatttt 52303112  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  52303113 ctatcacctattattataataacta 52303137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 16482576 - 16482699
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  16482576 ggcaaattctatggtacacccaataatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtagg-aaaaattatttt 16482674  T
Q  318 ctatcacctatgattataataacta 342  Q
    |||||||||||||||||||||||||    
T  16482675 ctatcacctatgattataataacta 16482699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 28493810 - 28493934
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||| |||| ||||||||| |||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  28493810 ggcaaattctatggtacacccaataatttaagtgtattgttacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 28493909  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  28493910 ctatcacctataattataataacta 28493934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 8461938 - 8461809
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||||||||| ||||||| |||| ||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  8461938 ttttatggcaacttctatggtacatccaaccatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaat 8461839  T
Q  312 tattttctatcacctatgattataataacta 342  Q
    || |||||||||||||| |||||||||||||    
T  8461838 ta-tttctatcacctataattataataacta 8461809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 31931104 - 31930980
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||    
T  31931104 ggcaaattctatggtacatccaacaatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgtaggaaaaatatatttt 31931005  T
Q  318 ctatcacctatgattataataacta 342  Q
    |||||| |||| |||||||||||||    
T  31931004 ctatcatctataattataataacta 31930980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 45423609 - 45423733
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||| ||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  45423609 ggcaagttctatggtacatccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 45423708  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  45423709 ctatcacctataattataataacta 45423733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 338
Target Start/End: Original strand, 50905581 - 50905701
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  50905581 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccgaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 50905680  T
Q  318 ctatcacctatgattataata 338  Q
    ||||||||||| |||||||||    
T  50905681 ctatcacctataattataata 50905701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 37498742 - 37498867
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  37498742 atggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaataagttattttttgtaagaaaaaa-tatt 37498840  T
Q  316 ttctatcacctatgattataataacta 342  Q
    ||||||||||||| |||||||||||||    
T  37498841 ttctatcacctataattataataacta 37498867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 23459958 - 23459838
Alignment:
Q  224 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaata--agttattttttgtaggaaaaaattattttctat 321  Q
    |||||||||||||||||  ||||||||||||||||| |||||| ||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||    
T  23459958 ttctatgatacacccaacaatttgagtgtattggtatatcaaacccttaaattaatagttaaaaatgagttattttttgtaggaaaaaattattttctat 23459859  T
Q  322 cacctatgattataataacta 342  Q
    ||||||| |||||||||||||    
T  23459858 cacctataattataataacta 23459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 26102876 - 26102755
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||| ||||| |||| |||| ||||||||| |||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  26102876 aaattctatggtacactcaataatttaagtgtattgatacaccaaatccttaaattaatagttaaatgagttattttttgaaggaaaaaattattttcta 26102777  T
Q  321 tcacctatgattataataacta 342  Q
    ||| ||||||||||||||||||    
T  26102776 tcaactatgattataataacta 26102755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 218 - 335
Target Start/End: Original strand, 27295058 - 27295175
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  27295058 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 27295157  T
Q  318 ctatcacctatgattata 335  Q
    ||||||||||| ||||||    
T  27295158 ctatcacctataattata 27295175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 39190964 - 39190839
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||| ||||||| |||| ||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||| |||||||    
T  39190964 tggcaagttctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaatattattt 39190865  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  39190864 tctatcacctataattataataacta 39190839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 39971676 - 39971551
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||| ||||||| |||  ||||| ||||||||||||||||| | ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  39971676 tggcaagttctatggtacgtccaataatttgagtgtattggtataccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 39971577  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  39971576 tctatcacctataattataataacta 39971551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 922248 - 922124
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  922248 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 922149  T
Q  318 ctatcacctatgattataataacta 342  Q
      ||||||||| |||| ||||||||    
T  922148 tcatcacctataattagaataacta 922124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 35305151 - 35305275
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  35305151 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaataagttattttttgtaggaaaaaaatatttt 35305250  T
Q  318 ctatcacctatgattataataacta 342  Q
      ||||||||| |||| ||||||||    
T  35305251 tcatcacctataattagaataacta 35305275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 41073270 - 41073393
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  |||||||||||||||||||  ||||||||||||| |||||||||| | ||||||||||||||||||||||| |||    
T  41073270 ggcaaattctatggtacacccaaccatttgagtgtattggtacacaaaatccttaaattaatagttaaatgaattattttttgtaggaaaaaatta-ttt 41073368  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  41073369 ctatcacctataattataataacta 41073393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 38262540 - 38262416
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||  ||  ||||||||||||||||||| ||||| |||||||| || ||||||| |||||||||||||||||||||||||||||    
T  38262540 ggcaagttctatggtacacttaacaatttgagtgtattggtacaccaaattcttaaattaattgttaaatgagttattttttgtaggaaaaaattatttt 38262441  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  38262440 ctatcacctataattataataacta 38262416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 46771138 - 46771014
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||| ||  ||||||||||||||||| | |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  46771138 ggcaagttctatggtacacctaacaatttgagtgtattggtataccaaatccttaaattaatagttaaatgagttattttttgtgggaaaaaattatttt 46771039  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||| | |||||||||||||    
T  46771038 ctatcacctgtaattataataacta 46771014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 224 - 342
Target Start/End: Original strand, 51519788 - 51519904
Alignment:
Q  224 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 323  Q
    ||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||||||||||  |||||||||||||||||    
T  51519788 ttctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtagg--aaaattattttctatca 51519885  T
Q  324 cctatgattataataacta 342  Q
    ||||| |||||||||||||    
T  51519886 cctataattataataacta 51519904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 214 - 339
Target Start/End: Complemental strand, 5956937 - 5956812
Alignment:
Q  214 ttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    |||||||||||| |||| |||||||||  |||| |||||||||||||| | |||  ||||||| |||||||||| |||||||||||||||||||||| ||    
T  5956937 ttatggcaaattatatggtacacccaacaatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtaggaaaaaaata 5956838  T
Q  314 ttttctatcacctatgattataataa 339  Q
    ||||||||||||||| ||||||||||    
T  5956837 ttttctatcacctataattataataa 5956812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 214 - 339
Target Start/End: Original strand, 2247063 - 2247188
Alignment:
Q  214 ttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    ||||| ||||||||||| |||||| || |||||||||||||||||||| |||||| ||||||| ||||||||||  | ||||||||| ||  ||||||||    
T  2247063 ttatgacaaattctatggtacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctattttttgaagagaaaaatta 2247162  T
Q  314 ttttctatcacctatgattataataa 339  Q
    ||||||||||||||| ||||||||||    
T  2247163 ttttctatcacctataattataataa 2247188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 29106748 - 29106646
Alignment:
Q  243 atttgagtgtattg---gtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||||||||||||   ||||| |||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29106748 atttgagtgtattgctggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaattattttctatcacctataattataataa 29106649  T
Q  340 cta 342  Q
    |||    
T  29106648 cta 29106646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 220 - 339
Target Start/End: Complemental strand, 11779040 - 11778921
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    |||||| |||| ||||||||| |||||||||||||||||||| |||||| ||||||| ||||||||||   |||||||||| ||  ||||||||||||||    
T  11779040 caaattatatggtacacccaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgttttattttttgaagagaaaaattattttct 11778941  T
Q  320 atcacctatgattataataa 339  Q
    ||||||||| ||||||||||    
T  11778940 atcacctataattataataa 11778921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 18641885 - 18641984
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||| ||||||| ||||| |||  |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  18641885 tatggcaagttctatggtacactcaacaatttgagtgtattggtacactaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattat 18641984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 220 - 328
Target Start/End: Original strand, 51184044 - 51184153
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagga-aaaaattattttc 318  Q
    ||||||||||| ||||||||| |||||||||||||||||||| |||||| ||||||| ||||||||||   |||||||||  | || |||||||||||||    
T  51184044 caaattctatggtacacccaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgttttatttttttaaagagaaaaattattttc 51184143  T
Q  319 tatcacctat 328  Q
    ||||||||||    
T  51184144 tatcacctat 51184153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 633060 - 632933
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||||||||||||||||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||    
T  633060 ttttatggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaat 632961  T
Q  312 tattttctatcacctatgattataataa 339  Q
    | ||||| ||||||||| ||||||||||    
T  632960 tgttttccatcacctataattataataa 632933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 23304401 - 23304528
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||| |||||| |||||| ||||||||| |||  |||||||||||||||  ||||| ||||||| ||||||||||  ||||||||||  ||  ||||||    
T  23304401 ttttaaggcaaaatctatggtacacccaaagatacgagtgtattggtacacaaaatcattaaattaatagttaaatgtgttatttttttaagagaaaaat 23304500  T
Q  312 tattttctatcacctatgattataataa 339  Q
    | ||||||||||||||| ||||||||||    
T  23304501 tgttttctatcacctataattataataa 23304528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 35874345 - 35874220
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||   | || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  35874345 ggcaaattctatggtacacccaatatatttgagtgtattggtacactcactctttaaattaatagttaaataagttgttttttgaagaaaaatattattt 35874246  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  35874245 tttatcatttataattataataacta 35874220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 224 - 342
Target Start/End: Original strand, 45673333 - 45673439
Alignment:
Q  224 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 323  Q
    ||||||| |||||||||  |||||||||||||| ||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  45673333 ttctatggtacacccaacaatttgagtgtattgatacatcaaatccttaaatg------------agttattttttgtaggaaaaaattattttctatca 45673420  T
Q  324 cctatgattataataacta 342  Q
    ||||| |||||||||||||    
T  45673421 cctataattataataacta 45673439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 50239612 - 50239519
Alignment:
Q  246 tgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||||||||||||||  ||||| ||||||| ||||||||||  ||||||||||| ||  ||||||||||||||||||||||| ||||||||||    
T  50239612 tgagtgtattggtacactaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattattttctatcacctataattataataa 50239519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 339
Target Start/End: Original strand, 7121954 - 7122077
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| || ||| || |||||||||||||||||||| |||||| ||||||| ||||||||||   || |||||||  |  ||||||||     
T  7121954 tatggcaaattctatggtatacctaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatgttttgttttttgacgagaaaaatta- 7122052  T
Q  315 tttctatcacctatgattataataa 339  Q
    |||||||||||||| ||||||||||    
T  7122053 tttctatcacctataattataataa 7122077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 44246372 - 44246305
Alignment:
Q  250 tgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  44246372 tgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 44246305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 6520366 - 6520267
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattattttctatcacctatgattataataact 341  Q
    ||||||||||||||||||||| |||  ||||||| |||||||||| | ||| |||||| |||||||||| ||||||||||||||||| |||||| |||||    
T  6520366 atttgagtgtattggtacatcgaatttttaaattaatagttaaatgaattatttttttataggaaaaaa-tattttctatcacctataattatagtaact 6520268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 48616856 - 48616733
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| ||||| |||  ||||||||||||||||||| | ||||  |||||| ||||||||||  |||| |||||| ||  ||||||| |    
T  48616856 tatggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaataaattaatagttaaatgtgtta-tttttgaagagaaaaattgt 48616758  T
Q  315 tttctatcacctatgattataataa 339  Q
    |||| ||||||||| ||||||||||    
T  48616757 tttccatcacctataattataataa 48616733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 17525462 - 17525556
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    |||||||||||  ||||||||||| ||||||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  17525462 atttgagtgtaccggtacatcaaacccttaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 17525556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 333
Target Start/End: Original strand, 43306582 - 43306644
Alignment:
Q  271 taaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgatta 333  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  43306582 taaattaatagttaaatgagttattttttgtaggaataaattattttctatcacctataatta 43306644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 23056768 - 23056857
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 310  Q
    ||||| |||| |||| ||||| |||| |||||||||||||| | |||  ||||||| |||||||||| ||||||||||||||||||||||    
T  23056768 aaattatatggtacatccaataatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtaggaaaaaa 23056857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 51056197 - 51056321
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||||| |||  |||||||||||  |||||| ||  || ||||||| ||||||||||||||||||||||| || |||| |||||||    
T  51056197 ggcaaattctatggtacacctaatatatttgagtgtaccggtacaccac-tctttaaattaatagttaaataagttattttttgaagaaaaatattattt 51056295  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  51056296 tttatcatttataattataataacta 51056321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 339
Target Start/End: Original strand, 52260817 - 52260934
Alignment:
Q  222 aattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctat 321  Q
    |||| |||| ||||| ||| || |||| |||||||||||| ||||||  |||||| ||||||||||  ||||| ||||| ||  ||||||| ||||||||    
T  52260817 aattatatggtacactcaaagaattgaatgtattggtacaccaaatcaataaattaatagttaaatgtgttatcttttgaagataaaaattgttttctat 52260916  T
Q  322 cacctatgattataataa 339  Q
    ||||||| ||||||||||    
T  52260917 cacctataattataataa 52260934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 339
Target Start/End: Complemental strand, 26011346 - 26011227
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    |||||| |||| |||||||||  |||||||||||||| |||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| |||||     
T  26011346 caaattttatggtacacccaaaaatttgagtgtattgatacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttcc 26011247  T
Q  320 atcacctatgattataataa 339  Q
    ||||||||| ||||||||||    
T  26011246 atcacctataattataataa 26011227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 339
Target Start/End: Original strand, 35910188 - 35910283
Alignment:
Q  244 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||| ||||||||||||| ||| ||  |||||| ||||||||||  ||||||||||| ||  ||||||| ||||||||||||||| ||||||||||    
T  35910188 tttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttttctatcacctataattataataa 35910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 42317231 - 42317116
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| ||||| |||   |||||||||||||||||||||||||  |||||| ||||||||||  ||||||||||| |  ||||  |||||||    
T  42317231 ggcaaattatatggtacactcaaaattttgagtgtattggtacatcaaatcaataaattaatagttaaatgtgttattttttgaaaaaaaatgttatttt 42317132  T
Q  318 ctatcacctatgatta 333  Q
    |||||| |||| ||||    
T  42317131 ctatcatctataatta 42317116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 339
Target Start/End: Original strand, 27352850 - 27352968
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||| |||| |||| ||||||||||||||| ||||  ||||  || |||| ||||||||||  |||| |||||| ||  |||||||||||| ||    
T  27352850 aaattctatggtacatccaaagatttgagtgtattgatacacaaaattattgaattaatagttaaatgtgttagtttttgaagagaaaaattattttata 27352949  T
Q  321 tcacctatgattataataa 339  Q
    |||||||| ||| ||||||    
T  27352950 tcacctataattgtaataa 27352968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 9166873 - 9166994
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||  |||||||||  ||||||||||||||||||| ||||||  |||||| ||||||||||  ||||||||||| |   ||||||| ||||    
T  9166873 ggcaaattatatagtacacccaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaatagaaaaattgtttt 9166972  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||  ||||  ||||||||||    
T  9166973 ctattgcctagaattataataa 9166994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 317
Target Start/End: Complemental strand, 32145048 - 32144975
Alignment:
Q  244 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||| || || | ||||||||    
T  32145048 tttgagtgtaccggtacatcaaatccttaaatttatagttaaatgagttattttttgaagaaatatattatttt 32144975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 34038571 - 34038446
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||| |||||  |||||||||||||||||||   | |  ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  34038571 ggcaaattctatggtacatccaatatatttgagtgtattggtacactcactttttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 34038472  T
Q  317 tctatcacctatgattataataacta 342  Q
    | ||||| ||||  ||||||||||||    
T  34038471 tttatcatctatacttataataacta 34038446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 38260802 - 38260927
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||| | |||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  38260802 ggcaaattctatggtacatctaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttgttttttgaagaaaaatattattt 38260901  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  38260902 tttatcatttataattataataacta 38260927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 47719378 - 47719258
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||||||  |||||  |||  |||| ||||||||||||||||||||| ||||||| |||| | |||  ||||||||||| ||  |||| |||||||    
T  47719378 ggcaaattctacaatacattcaaaaatttaagtgtattggtacatcaaatcattaaattaataggt-aatgtgttattttttgaagagaaaatttatttt 47719280  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||| ||||||    
T  47719279 ctatcacctataattgtaataa 47719258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 6526836 - 6526709
Alignment:
Q  217 tggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatt-at 314  Q
    |||||||||||||| ||||||||||  |||||||||||  | ||||   | |||||||||| |||||||||| |||| |||||||||| |||| |||  |    
T  6526836 tggcaaattctatggtacacccaatatatttgagtgtaccgatacactcactccttaaattaatagttaaatgagttgttttttgtagaaaaatattgtt 6526737  T
Q  315 tttctatcacctatgattataataacta 342  Q
    ||| |||||| ||| |||||||||||||    
T  6526736 tttttatcacttataattataataacta 6526709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 31821963 - 31821864
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    |||||||||||| |||| ||  | || ||||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| |||||||||||||    
T  31821963 atttgagtgtatcggtatatttattctttaaattcatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataataacta 31821864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 477841 - 477735
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| |||| ||||||| || |||| |||||||    
T  477841 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttgttttttgaagaaaaatattattt 477742  T
Q  317 tctatca 323  Q
    |||||||    
T  477741 tctatca 477735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 24381316 - 24381442
Alignment:
Q  218 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattatt 315  Q
    ||||||||||||| |||||| ||| ||||||||||||  ||||||   | || ||||||| |||||||||| ||||| ||||||| || |||| ||| ||    
T  24381316 ggcaaattctatggtacacctaatagatttgagtgtaccggtacactcactctttaaattaatagttaaatgagttatttttttgaagaaaaatattgtt 24381415  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||| ||| |||||||||||||    
T  24381416 ttttatcacttataattataataacta 24381442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 28791774 - 28791653
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| || | ||||| |||  ||||| ||||||||||||| ||| ||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  28791774 ggcaaattttacggtacactcaaaaatttgggtgtattggtacaccaagtcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 28791675  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||  ||||||||||    
T  28791674 ctatcacctacaattataataa 28791653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 42647450 - 42647523
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataactat 343  Q
    ||||||| |||||| ||||||||||||||| ||| |||||| ||||||||||||  ||  ||||||||||||||    
T  42647450 ttaaattaatagtttaataagttattttttttagaaaaaaaatattttctatcatttaaaattataataactat 42647523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 51369327 - 51369441
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||||||||| ||||| |||  |||||||||||||| |||| |||||||||||||             ||||||||||||||||||||||  |||    
T  51369327 atggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaatccttaaatg------------agttattttttgtaggaaaaaaacatt 51369414  T
Q  316 ttctatcacctatgattataataacta 342  Q
    ||||||||  ||| |||||||||||||    
T  51369415 ttctatcatttataattataataacta 51369441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 36275098 - 36275002
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||||||||||  || | ||||||  ||||||  |||||||||  ||||||||||| |   ||||||||||||||||||||||| ||||||||||    
T  36275098 atttgagtgtattaatataccaaatcaataaattagtagttaaatgtgttattttttgaaaagaaaaattattttctatcacctataattataataa 36275002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 52180287 - 52180359
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| ||||||||||||||| ||||||| || |||| |||||||| |||||  ||| |||||||||||||    
T  52180287 ttaaattaatagttaaataagttgttttttgaagaaaaatattattttttatcatttataattataataacta 52180359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 339
Target Start/End: Original strand, 2620680 - 2620767
Alignment:
Q  252 tattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||||||||  |||||  |||||| ||||||||||  ||||||||||| ||  ||||||| |||| |||||||||| ||||||||||    
T  2620680 tattggtacactaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttttatatcacctataattataataa 2620767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 31076018 - 31075891
Alignment:
Q  217 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatt-ttttgtaggaaaaaattat 314  Q
    |||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| ||| |||||| ||||||| ||||| || |||| |||||    
T  31076018 tggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattcattaaattaataattaaatgagttatttttttgaagaaaaatattat 31075919  T
Q  315 tttctatcacctatgattataataacta 342  Q
    ||| ||| |  ||| |||||||||||||    
T  31075918 tttttattatttataattataataacta 31075891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 34256453 - 34256532
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttt 297  Q
    ||||||||||||| |||||||||  |||||||||||| |||||| |||||  ||||||| ||| |||||  |||||||||    
T  34256453 ggcaaattctatggtacacccaacaatttgagtgtatcggtacaccaaattattaaattaataattaaacgagttatttt 34256532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 51787876 - 51787749
Alignment:
Q  217 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta-t 314  Q
    |||||||||||||| |||| |||||  |||||||||||  |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| |||| |    
T  51787876 tggcaaattctatggtacatccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatt 51787777  T
Q  315 tttctatcacctatgattataataacta 342  Q
    ||| |||||  ||| |||||||||||||    
T  51787776 tttttatcatttataattataataacta 51787749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 48977286 - 48977200
Alignment:
Q  215 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 300  Q
    |||||||||||||||| ||||| ||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| |||||||    
T  48977286 tatggcaaattctatggtacactcaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttgttttttg 48977200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 341
Target Start/End: Original strand, 49854107 - 49854228
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaattattttc 318  Q
    ||||||||||| ||  |||||||||| |||||||   | |||  |||||||| |||| || |||||||||||| ||||||| || |||||||||||||||    
T  49854107 caaattctatggtatgcccaatgattcgagtgtaccagcacacaaaatcctttaattaattgttaaataagttgatttttttta-gaaaaaattattttc 49854205  T
Q  319 tatcacctatgattataataact 341  Q
    ||| |  ||| ||||||||||||    
T  49854206 tattatttataattataataact 49854228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 45809494 - 45809563
Alignment:
Q  268 ccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    ||||||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  45809494 ccttaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 45809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 339
Target Start/End: Original strand, 33906344 - 33906440
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||||| ||||||||||   ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||| ||||||||| ||||||||||    
T  33906344 atttgagtatattggtacactcaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttccatcacctataattataataa 33906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 21072776 - 21072900
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattatt 315  Q
    |||||||| |||| ||||||||||  |||||| ||||| |||||  | | || ||||||| ||||||||||||||||||||||| || |||| |||| ||    
T  21072776 ggcaaattatatggtacacccaatacatttgactgtatcggtac--ccactctttaaattaatagttaaataagttattttttgaagaaaaataattttt 21072873  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||  ||| |||| ||||||||    
T  21072874 ttttatcatttataattaaaataacta 21072900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 45622838 - 45622791
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||| ||||||||||||||||||||||| || |||| ||||||||    
T  45622838 ttaaattcatagttaaataagttattttttgaagaaaaatattatttt 45622791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 46281939 - 46282048
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aatt 312  Q
    |||||||||||||||| ||||||||||  ||||||||||  |||||| |||| | ||||| | ||| ||||||   || ||||||| |||||||  ||||    
T  46281939 tatggcaaattctatggtacacccaatattttgagtgtaccggtacaccaaa-cattaaaataataattaaattgattgttttttgaaggaaaaataatt 46282037  T
Q  313 attttctatca 323  Q
    |||||||||||    
T  46282038 attttctatca 46282048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 46872369 - 46872474
Alignment:
Q  218 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattat 314  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||| ||| || | ||||| |||  ||||| |||||||||||  | |||||  ||||||    
T  46872369 ggcaaattctatgatacacccaataaatttgggtgtattggtacaccaagtcgtaaaattaata-ataaatgagttatttttttgaagaaaaataattat 46872467  T
Q  315 tttctat 321  Q
    |||||||    
T  46872468 tttctat 46872474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 17554224 - 17554118
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||  || |||| |||||||    
T  17554224 ggcaaattctatggtacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgagttgttttttaaagaaaaatattattt 17554125  T
Q  317 tctatca 323  Q
    |||||||    
T  17554124 tctatca 17554118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 317
Target Start/End: Complemental strand, 30263987 - 30263889
Alignment:
Q  220 caaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||| ||||||||||  |||||||||||    |||| ||| || ||||||| |||||||||| |||| ||||||| || |||| ||||||||    
T  30263987 caaattctatggtacacccaatatatttgagtgtacccatacaccaattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 30263889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 44978868 - 44978950
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    |||||||||||||| |||||||||  |||||||||||  |||||| |||||  ||||||| ||| |||||  |||| ||||||    
T  44978868 tggcaaattctatggtacacccaacaatttgagtgtaccggtacaccaaattattaaattaataattaaacgagttttttttt 44978950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 9260223 - 9260116
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattat 314  Q
    ||||||||||||| ||||||||||| |||||  ||||| |||||||||| || | ||||| |||  ||||| |||||||||||  | |||||  ||||||    
T  9260223 ggcaaattctatggtacacccaatgaatttggatgtatcggtacatcaagtcgtaaaattaata-ataaatgagttatttttttgaagaaaaataattat 9260125  T
Q  315 tttctatca 323  Q
    |||||||||    
T  9260124 tttctatca 9260116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 10179219 - 10179158
Alignment:
Q  278 atagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||||||||  ||||||||||| ||  ||||||| |||||||||| |||| ||||||||||    
T  10179219 atagttaaatgtgttattttttgaagagaaaaattgttttctatcatctataattataataa 10179158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 49616191 - 49616150
Alignment:
Q  259 acatcaaatccttaaattgatagttaaataagttattttttg 300  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  49616191 acatcaaattcttaaattaatagttaaatgagttattttttg 49616150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 2665218 - 2665277
Alignment:
Q  257 gtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||| |||||||| ||||||||||| ||| ||| ||| | ||||||||||||||    
T  2665218 gtacatcaaatacttaaattaatagttaaatatgttgtttgttg-aagaaaaaattatttt 2665277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 323
Target Start/End: Original strand, 12227119 - 12227229
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa---aatt 312  Q
    ||||||||||||||| |||||||||   ||||||||||   ||||| |||| | ||||||| ||| |||||| |||| ||||||  | |||||   ||||    
T  12227119 atggcaaattctatggtacacccaacattttgagtgtaccagtacaccaaagcattaaattaataattaaattagttgtttttttgaagaaaaaataatt 12227218  T
Q  313 attttctatca 323  Q
    |||||||||||    
T  12227219 attttctatca 12227229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 14077329 - 14077436
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 315  Q
    ||||||||||| | |||| ||||   ||||||||||  |||||| |||| | ||||||| ||| |||||| |||| ||||||| || ||||  |||||||    
T  14077329 ggcaaattctacggtacatccaacattttgagtgtaccggtacaccaaagcattaaattaataattaaattagttgttttttgaagaaaaaataattatt 14077428  T
Q  316 ttctatca 323  Q
    ||||||||    
T  14077429 ttctatca 14077436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 41568445 - 41568551
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 315  Q
    ||||||||||||| ||||||||||  ||||||||||  |||||| |||| | ||||| | ||| ||||||   || ||||||| |||||||  |||||||    
T  41568445 ggcaaattctatggtacacccaatattttgagtgtaccggtacaccaaa-cattaaaataataattaaattgattgttttttgaaggaaaaataattatt 41568543  T
Q  316 ttctatca 323  Q
    ||||||||    
T  41568544 ttctatca 41568551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 47601672 - 47601728
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    |||||||||||  |||||| |||||| ||||||| ||| ||||||||||| ||||||    
T  47601672 atttgagtgtaccggtacaccaaatcattaaattcataattaaataagttgtttttt 47601728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 50631996 - 50631916
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttg 300  Q
    |||||| ||| |||||||||| |||||||||||  |||||| |||| | ||||||| ||| |||||| |||| ||||||||    
T  50631996 aaattccatggtacacccaataatttgagtgtaccggtacaccaaagcgttaaattaataattaaatgagttgattttttg 50631916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 3716324 - 3716449
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  3716324 tggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 3716423  T
Q  317 tctatcacctatgattataataacta 342  Q
    ||||||||||||||||||||||||||    
T  3716424 tctatcacctatgattataataacta 3716449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 34280635 - 34280511
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34280635 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaattatttt 34280536  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||| ||| |||||||||||||    
T  34280535 ctatcacatataattataataacta 34280511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 30539568 - 30539693
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  30539568 tggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 30539667  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  30539668 tctatcacctataattataataacta 30539693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 27538915 - 27539039
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  27538915 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaataattatttt 27539014  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  27539015 ctatcacctataattataataacta 27539039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 30342819 - 30342948
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    |||||||||||||| |||| |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  30342819 ttttatggcaaattatatggtacacccaaccatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaat 30342918  T
Q  312 tattttctatcacctatgattataataacta 342  Q
    || |||||||||||||| |||| ||||||||    
T  30342919 ta-tttctatcacctataattaaaataacta 30342948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 41760068 - 41759942
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat-tatt 315  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||    
T  41760068 tggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtagtaaaaaatatatt 41759969  T
Q  316 ttctatcacctatgattataataacta 342  Q
    ||||||||||||| |||||||||||||    
T  41759968 ttctatcacctataattataataacta 41759942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 224 - 342
Target Start/End: Original strand, 52589077 - 52589195
Alignment:
Q  224 ttctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 323  Q
    ||||||| |||| ||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  52589077 ttctatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattattttctatca 52589176  T
Q  324 cctatgattataataacta 342  Q
    ||||| ||||||| |||||    
T  52589177 cctataattataacaacta 52589195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 51436220 - 51436095
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa-aaaattattt 316  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||| |||| |||||    
T  51436220 ggcaaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaaatattt 51436121  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  51436120 tctatcacctataattataataacta 51436095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 37855121 - 37855245
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||||||||||| ||| ||  |||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  37855121 ggcaaattctatgatatacctaacaatttgagtgtataggtacaccaaatccttaaattaatagttaaatgagttattttttgtatgaaaaaaatatttt 37855220  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  37855221 ctatcacctataattataataacta 37855245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 28037679 - 28037810
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaa 310  Q
    ||||||||||||||||||| | |||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||  ||||||    
T  28037679 ttttatggcaaattctatggtgcacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttactttttgtagaaaaaaaa 28037778  T
Q  311 ttattttctatcacctatgattataataacta 342  Q
     ||||||||||||||||| |||||||||||||    
T  28037779 atattttctatcacctataattataataacta 28037810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 37519373 - 37519246
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| || ||||||| |||||| |||||||||||| || | | ||||||| |||||| ||| | ||||||||||||||||||||||||    
T  37519373 tatggcaaattctatggtatacccaatcatttgaatgtattggtacaccataccattaaattaatagttcaatgaattattttttgtaggaaaaaattat 37519274  T
Q  315 tttctatcacctatgattataataacta 342  Q
    |||||||||||||| |||||||||||||    
T  37519273 tttctatcacctataattataataacta 37519246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 37523589 - 37523462
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| || ||||||| |||||| |||||||||||| || | | ||||||| |||||| ||| | ||||||||||||||||||||||||    
T  37523589 tatggcaaattctatggtatacccaatcatttgaatgtattggtacaccataccattaaattaatagttcaatgaattattttttgtaggaaaaaattat 37523490  T
Q  315 tttctatcacctatgattataataacta 342  Q
    |||||||||||||| |||||||||||||    
T  37523489 tttctatcacctataattataataacta 37523462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 218 - 337
Target Start/End: Complemental strand, 48066411 - 48066292
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| ||||| ||||||||||||||||| | |||||| ||||||| |||||| ||||| ||||||||||||| |||||||||||||    
T  48066411 ggcaaattctatggtacatccaatcatttgagtgtattggtataccaaatcattaaattaatagttcaataaattattttttgtagaaaaaaattatttt 48066312  T
Q  318 ctatcacctatgattataat 337  Q
    ||||||||||| ||||||||    
T  48066311 ctatcacctataattataat 48066292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 43137771 - 43137653
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  |||| |||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  43137771 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 43137672  T
Q  318 ctatcacctatgattataa 336  Q
    | ||||||||| |||||||    
T  43137671 cgatcacctataattataa 43137653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 14802712 - 14802836
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||| |||  |||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  14802712 ggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaatccttaaattaatagttaaatgagttattttttgtagaaaaaaaatatttt 14802811  T
Q  318 ctatcacctatgattataataacta 342  Q
      ||||||||| |||||||||||||    
T  14802812 tcatcacctataattataataacta 14802836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 55722476 - 55722600
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||||||||||||| | ||  |||||| ||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||||||| ||||||    
T  55722476 ggcaaattctatgatacatctaacaatttgaatgtattggtacactaaatccttaaattaatagttaattgagttattttttgtaggaaaaaaatatttt 55722575  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| ||||||| |||||    
T  55722576 ctatcacctataattataacaacta 55722600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 38835849 - 38835974
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||| ||||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||     
T  38835849 tatgacaaattctatggtacacctaataatttgagtgtattggtacatcaaattcttaaattaatagttaaatgagtt-ttttttgtaggaaaaaatta- 38835946  T
Q  315 tttctatcacctatgattataataacta 342  Q
    ||||||| | |||| |||||||||||||    
T  38835947 tttctatgatctataattataataacta 38835974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 243 - 342
Target Start/End: Original strand, 46041726 - 46041825
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    |||||||||||||| |||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  46041726 atttgagtgtattgatacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaattattttatatcacctataattataataacta 46041825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 31908443 - 31908564
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  || |||||||| ||  ||||||| ||||    
T  31908443 ggcaaattctatgatacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgtgattttttgaagagaaaaattgtttt 31908542  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  31908543 ctatcacctataattataataa 31908564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 48579316 - 48579192
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||| |||| |||| ||||  |||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||| ||||| |||| |||||    
T  48579316 tggcaaattatatggtacatccaacaatttgaatgtattggtacaccaaatccttaaattaatagttaaatgagttatttttt-taggagaaaaatattt 48579218  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  48579217 tctatcacctataattataataacta 48579192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 47302029 - 47302141
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattg--atagttaaataagttattttttgtaggaaaaaattatt 315  Q
    |||||||| |||| | |||| ||  ||||||||||||||||||||||||||||||||||   |||||||||| ||||| |||||||||||||||||||||    
T  47302029 ggcaaattttatggtgcacctaacaatttgagtgtattggtacatcaaatccttaaattataatagttaaatgagttactttttgtaggaaaaaattatt 47302128  T
Q  316 ttctatcacctat 328  Q
    |||||||||||||    
T  47302129 ttctatcacctat 47302141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 38975277 - 38975401
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt-gtaggaaaaaattattt 316  Q
    ||||||||||||| |||||||||  | ||||||||||| |||||  ||||| ||||||| |||||||||| ||||||||||| | || ||||||||||||    
T  38975277 ggcaaattctatggtacacccaa--aattgagtgtattagtacacaaaatctttaaattaatagttaaatgagttatttttttgaagaaaaaaattattt 38975374  T
Q  317 tctatcacctatgattataataactat 343  Q
    |||||||||||| ||||||||||||||    
T  38975375 tctatcacctataattataataactat 38975401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 9858244 - 9858365
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||  ||||||||| ||| ||||||||||| |||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  9858244 ggcaaattctatagtacacccaaagatatgagtgtattgatacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 9858343  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  9858344 ctatcacctataattataataa 9858365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 29646624 - 29646745
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| | ||   |||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| || ||||| |||||||    
T  29646624 ggcaaattctatggtacatcaaaaattttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagaaaaaagttatttt 29646723  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  29646724 ctatcacctataattataataa 29646745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 53389253 - 53389128
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa-aaaattattt 316  Q
    ||||||||||||| |||| | ||  |||||||||||| ||||||  ||||| ||||||| |||||||||| |||||||||||||||||| |||| |||||    
T  53389253 ggcaaattctatggtacatcaaacaatttgagtgtatcggtacactaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaaaatattt 53389154  T
Q  317 tctatcacctatgattataataacta 342  Q
    ||||||| |||| |||||||||||||    
T  53389153 tctatcatctataattataataacta 53389128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 52809350 - 52809227
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||| ||||| |||| ||||  ||||||||||||||||||| | |||  ||||||| |||||||||| ||||||||||| |||||||||| ||||||    
T  52809350 ggcaaatactatggtacatccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttataggaaaaaa-tatttt 52809252  T
Q  318 ctatcacctatgattataataacta 342  Q
    | ||||||||| |||||||||||||    
T  52809251 caatcacctataattataataacta 52809227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 36091059 - 36091179
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| |||| |||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| | || |||| | ||||    
T  36091059 ggcaaattatatggtacatccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttattttttg-aagagaaaactgtttt 36091157  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  36091158 ctatcacctataattataataa 36091179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 222 - 342
Target Start/End: Complemental strand, 36592437 - 36592316
Alignment:
Q  222 aattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt-cta 320  Q
    |||| |||| |||||||||  |||||||||||||| |||| |||||||||||||| |||||||||| |||||||||||| |  ||||||| ||||| | |    
T  36592437 aattttatggtacacccaaaaatttgagtgtattgttacaccaaatccttaaattaatagttaaatgagttattttttgaaaaaaaaaatcattttacaa 36592338  T
Q  321 tcacctatgattataataacta 342  Q
    ||| |||| |||||||||||||    
T  36592337 tcatctataattataataacta 36592316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 33076323 - 33076263
Alignment:
Q  282 ttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33076323 ttaaatgagttattttttgtaggaaaaaattattttctatcacctataattataataacta 33076263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 56361717 - 56361598
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||  ||  ||||||||||||||||||| ||||||  |||||| ||||||||||  ||||||||||| ||  ||||| ||||||    
T  56361717 ggcaaattctatgttacacaaaa--atttgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaaatatttt 56361620  T
Q  318 ctatcacctatgattataataa 339  Q
     |||||||||| ||||||||||    
T  56361619 atatcacctataattataataa 56361598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 339
Target Start/End: Complemental strand, 39162207 - 39162090
Alignment:
Q  222 aattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctat 321  Q
    ||||||||| ||||| |||  ||||| ||||||||||||| ||| ||  |||||| ||||||||||  ||||||||||| ||  ||||||| ||||||||    
T  39162207 aattctatggtacactcaaaaatttgggtgtattggtacaccaagtcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttttctat 39162108  T
Q  322 cacctatgattataataa 339  Q
    ||||||| ||||||||||    
T  39162107 cacctataattataataa 39162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 46216178 - 46216057
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||  |||||||||  ||||||||||||||||||| | ||||   ||||| ||| ||||||  ||||||||||| ||  ||||||| ||||    
T  46216178 ggcaaattctattgtacacccaaaaatttgagtgtattggtacacccaatcaacaaattaataattaaatgtgttattttttgaagagaaaaattgtttt 46216079  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  46216078 ctatcacctataattataataa 46216057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 1414505 - 1414387
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| ||||  ||||| || |||||||||||||||||||| |||||| ||||||| ||||||||||    | ||||||  ||  ||||||||||||    
T  1414505 ggcaaattttatggcacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaat---gtgtttttttaagagaaaaattatttt 1414409  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  1414408 ctatcacctataattataataa 1414387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 18425525 - 18425454
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaata 288  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| |||||| ||||||| |||||||||||    
T  18425525 tggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaata 18425454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 339
Target Start/End: Original strand, 47302399 - 47302517
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    ||||| |||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||| |    
T  47302399 aaattttatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttttcca 47302498  T
Q  321 tcacctatgattataataa 339  Q
    |||||||| ||||||||||    
T  47302499 tcacctataattataataa 47302517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 352879 - 352754
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||| |||||  |||| ||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  352879 ggcaaattctatggtacatccaatatatttaagtgtaccggtacacctactctttaaattaatagttaaataagttcttttttgaagaaaaatattattt 352780  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  352779 tttatcatttataattataataacta 352754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 33491568 - 33491443
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||| |||||  |||||||||||  |||||| |   || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  33491568 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacccgctctttaaattaatagttaaataagttgttttttgaagaaaaatattattt 33491469  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  33491468 tttatcatttataattataataacta 33491443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 43363327 - 43363452
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||| |||| |||||| |||  ||||||||||||||||| ||    || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  43363327 ggcaaattttatggtacacctaatatatttgagtgtattggtatattcgctctttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 43363426  T
Q  317 tctatcacctatgattataataacta 342  Q
    | ||||| |||| |||||||||||||    
T  43363427 tttatcatctataattataataacta 43363452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 423147 - 423275
Alignment:
Q  215 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    ||||| |||||||||  |||| |||||  |||||||||||| |||||| | | || |||||||  |||||||||||||| ||||||| || |||| ||||    
T  423147 tatggtaaattctatcgtacatccaatatatttgagtgtatcggtacacccattctttaaattagtagttaaataagttgttttttgaagaaaaatatta 423246  T
Q  314 ttttctatcacctatgattataataacta 342  Q
    |||| |||||  ||| |||||||||||||    
T  423247 ttttttatcatttataattataataacta 423275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 9356789 - 9356673
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||||||||  |||| |||||||||||| ||  | || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  9356789 ggcaaattctatggtacacccaatatattttagtgtattggtaaattcagtctttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 9356690  T
Q  317 tctatcacctatgatta 333  Q
    | ||||| |||| ||||    
T  9356689 tttatcatctataatta 9356673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 53695778 - 53695682
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||| |||||||||||||||||||   ||||| ||||| ||||  ||||||||||| ||  ||||||| ||||| ||||||||| ||||||||||    
T  53695778 atttgaatgtattggtacatcaaatcaaaaaattaatagtcaaatgtgttattttttgaagagaaaaattgttttccatcacctataattataataa 53695682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 53936922 - 53936819
Alignment:
Q  215 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    |||||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| ||||    
T  53936922 tatggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgagttgttttttgaagaaaaatatta 53936823  T
Q  314 tttt 317  Q
    ||||    
T  53936822 tttt 53936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 34828722 - 34828847
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||||||||||||||  ||||||||| |  |||| | | | || ||||||| | |||||||| |||| ||||||| || |||| |||||||    
T  34828722 ggcaaattctatgatacacccaatatatttgagtgcaccggtatacccattctttaaattaacagttaaatgagttgttttttgaagaaaaatattattt 34828821  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  34828822 tttatcatttataattataataacta 34828847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 46004733 - 46004609
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||| ||||||||| |||| ||||  ||||||||||||||||||| |||||   || ||| || || ||||  ||||||||||| ||  ||||||| |    
T  46004733 tatggcgaattctatggtacatccaaaaatttgagtgtattggtacaccaaattaatatattaatcgtaaaatgtgttattttttgaagagaaaaattgt 46004634  T
Q  315 tttctatcacctatgattataataa 339  Q
    || ||||||||||  ||||||||||    
T  46004633 ttactatcacctacaattataataa 46004609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 30891496 - 30891453
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggta 259  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  30891496 atggcaaattctatggtacacccaaagatttgagtgtattggta 30891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 50383738 - 50383611
Alignment:
Q  216 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||| |||| |||| |||||  |||||||||||  ||||||   | || ||||||| |||||||||| |||| ||||||| || |||| ||| |    
T  50383738 atggcaaattatatggtacatccaatatatttgagtgtaccggtacactcactctttaaattaatagttaaatgagttgttttttgaagaaaaatattgt 50383639  T
Q  315 tttctatcacctatgattataataacta 342  Q
    ||| |||||| ||| |||||||||||||    
T  50383638 tttttatcacttataattataataacta 50383611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 337
Target Start/End: Complemental strand, 42881409 - 42881315
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    |||||||||||  |||||| ||||  || ||||| |||||||||| |||||||||||| || |||| |||||||| |||||  ||| ||||||||    
T  42881409 atttgagtgtaccggtacaccaaagtctaaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataat 42881315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 323
Target Start/End: Original strand, 24291976 - 24292084
Alignment:
Q  216 atggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aatta 313  Q
    ||||||||||||||| ||||||||||  ||||| ||||||||||||| ||| || | ||||| |||  ||||| |||| ||||||| || |||| |||||    
T  24291976 atggcaaattctatggtacacccaataaatttgggtgtattggtacaccaagtcgtaaaattaata-ataaatgagttgttttttgaagaaaaataatta 24292074  T
Q  314 ttttctatca 323  Q
    ||||||||||    
T  24292075 ttttctatca 24292084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 5971080 - 5970981
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attattttctatcacctatgattataataact 341  Q
    |||||| ||||  |||||||| | || ||||||| |||||||||||| || ||||||| |||||||| |||||||| |||||  ||| ||||||||||||    
T  5971080 atttgattgtagcggtacatccactctttaaattaatagttaaataaattgttttttg-aggaaaaatattattttttatcatttataattataataact 5970982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 31998781 - 31998853
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| ||||||||||||||  ||||||| || |||| |||||||| |||||  ||| |||||||||||||    
T  31998781 ttaaattaatagttaaataagtcgttttttgaagaaaaatattattttttatcatttataattataataacta 31998853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 339
Target Start/End: Complemental strand, 32289310 - 32289190
Alignment:
Q  220 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 318  Q
    |||||||||||||||||| |||  |||||||| ||||||||||   | || ||||||| |||||||||||| || |||||| |   |||| ||||||||     
T  32289310 caaattctatgatacacctaatatatttgagtttattggtacactcactctttaaattaatagttaaataaattgtttttttttaaaaaatattattttt 32289211  T
Q  319 tatcacctatgattataataa 339  Q
    ||| | |||| ||||||||||    
T  32289210 tattatctataattataataa 32289190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 42177750 - 42177622
Alignment:
Q  215 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    |||||||||||||||| ||||||||||  ||||||||||   |||| |   | || ||||||| || ||||||| |||| ||||||| || |||| ||||    
T  42177750 tatggcaaattctatggtacacccaatatatttgagtgttccggtatactcactctttaaattaatggttaaatgagttgttttttgaagaaaaatatta 42177651  T
Q  314 ttttctatcacctatgattataataacta 342  Q
    ||||||||||  |||  ||||||||||||    
T  42177650 ttttctatcatttatatttataataacta 42177622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 338
Target Start/End: Original strand, 54996094 - 54996218
Alignment:
Q  215 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    ||||| |||||||||| |||||| |||  ||||||||||| ||||| ||  | || ||||||| ||| |||||| |||| ||||||| || |||| ||||    
T  54996094 tatggtaaattctatggtacacctaatatatttgagtgtactggtatattcactctttaaattaataattaaatgagttgttttttgaagaaaaatatta 54996193  T
Q  314 ttttctatcacctatgattataata 338  Q
    |||| |||||  ||| |||||||||    
T  54996194 ttttttatcatttataattataata 54996218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 39380810 - 39380699
Alignment:
Q  213 tttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aat 311  Q
    |||||||||||||||||| ||||  |||  |||| ||||||  |||||| |||||| ||||||| | | |||||| |||| ||||||  || |||| |||    
T  39380810 tttatggcaaattctatggtacattcaaaaatttaagtgtaccggtacaccaaatcattaaattaacaattaaatgagttttttttttaagaaaaagaat 39380711  T
Q  312 tattttctatca 323  Q
    ||||||||||||    
T  39380710 tattttctatca 39380699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 52591893 - 52591928
Alignment:
Q  307 aaaattattttctatcacctatgattataataacta 342  Q
    |||||||||||||||||||||| |||||||||||||    
T  52591893 aaaattattttctatcacctataattataataacta 52591928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 323
Target Start/End: Complemental strand, 13548812 - 13548703
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgt--aggaaaaaatta 313  Q
    |||||||||| |||| | || ||||  |||||||||||  |||||| |||||| ||||||| ||| |||||| |||| | ||||||  |  |||||||||    
T  13548812 atggcaaattttatggtgcatccaaaaatttgagtgtaccggtacaccaaatcattaaattaataattaaatgagttgtgttttgtgaaaaaaaaaatta 13548713  T
Q  314 ttttctatca 323  Q
    ||||||||||    
T  13548712 ttttctatca 13548703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 30891453 - 30891420
Alignment:
Q  306 aaaaattattttctatcacctatgattataataa 339  Q
    ||||||||||||||||||||||| ||||||||||    
T  30891453 aaaaattattttctatcacctataattataataa 30891420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 32737595 - 32737474
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||| |||| |||||||||||  ||| || |||||  ||| ||| |||||||||| | || ||||||  || |||| ||||  ||    
T  32737595 ggcaaattctatggtacactcaataatttgagtgtaccggtgcaccaaatatttatattaatagttaaatgaattgttttttaaagaaaaatattacatt 32737496  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||  ||| ||||||||||    
T  32737495 ctatcatttataattataataa 32737474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 40439044 - 40438983
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaatt 276  Q
    |||||||||||||||| ||||| |||  |||||||||||  |||||| |||||| |||||||    
T  40439044 tatggcaaattctatggtacactcaaaaatttgagtgtaccggtacaccaaatcattaaatt 40438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 50775774 - 50775899
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||| |||||||||  |||  ||||| |||||  |||||||  | || ||||||| || ||||||| |||| ||||||| || |||| |||||||    
T  50775774 ggcaaattccatgatacacataatatatttgggtgtaccggtacattcattctttaaattaatggttaaatgagttgttttttgaagaaaaatattattt 50775873  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||  |||  ||||||||||||    
T  50775874 tctatcatttatatttataataacta 50775899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 298
Target Start/End: Original strand, 31681337 - 31681417
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttt 298  Q
    ||||||||||||| |||||| ||  ||||  ||||||||||||| ||||||  |||||| |||||||| |  |||||||||    
T  31681337 ggcaaattctatggtacacctaaaaattttggtgtattggtacaccaaatcaataaattaatagttaagtgtgttattttt 31681417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 32570370 - 32570474
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaattattttc 318  Q
    ||||||||||| |||| ||||   ||||||||||  ||| || |||| | ||||||| ||| |||||| |||||||||||| ||  ||||||| ||||||    
T  32570370 caaattctatggtacatccaaaattttgagtgtaccggtgcaccaaacctttaaattaataattaaattagttattttttgaagaaaaaaaatcattttc 32570469  T
Q  319 tatca 323  Q
    |||||    
T  32570470 tatca 32570474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 36631388 - 36631316
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| || ||||||| |||| ||||||| || |||| ||||||||||||||  |||  ||||||||||||    
T  36631388 ttaaattaatggttaaatgagttgttttttgaagaaaaatattattttctatcatttatatttataataacta 36631316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 37992095 - 37992007
Alignment:
Q  211 gttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    ||||| || |||||| |||| |||||||||   ||||||||||  ||||||||||| | ||||||| ||| |||||| |||| ||||||    
T  37992095 gttttttgacaaattttatggtacacccaacattttgagtgtaccggtacatcaaagcattaaattaataattaaattagttgtttttt 37992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 50607678 - 50607810
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa- 309  Q
    ||||| |||||||| |||| ||||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||  | ||||||     
T  50607678 ttttaaggcaaattttatggtacacccaatatatttgagtgtaccggtacacgcactctttaaattaatggttaaatgagttgtttttttgaagaaaaat 50607777  T
Q  310 attattttctatcacctatgattataataacta 342  Q
    ||||||||||||||  |||  ||||||||||||    
T  50607778 attattttctatcatttatatttataataacta 50607810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 54506226 - 54506154
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| |||||||||| |||| ||||||| || |||| |||||||| ||| |  ||| |||||||||||||    
T  54506226 ttaaattcatagttaaatgagttgttttttgaagaaaaatattattttttattatttataattataataacta 54506154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 11227625 - 11227751
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  11227625 atggcaaattctatggtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaaatatt 11227724  T
Q  316 ttctatcacctatgattataataacta 342  Q
    ||||||||||||| |||||||||||||    
T  11227725 ttctatcacctataattataataacta 11227751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 58920 - 59044
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  58920 ggcaaaatctatggtacacccaataatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgtatgaaaaaattatttt 59019  T
Q  318 ctatcacctatgattataataacta 342  Q
    |||||| ||||||||||||||||||    
T  59020 ctatcatctatgattataataacta 59044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 42427979 - 42427853
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42427979 atggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaattatt 42427880  T
Q  316 ttctatcacctatgattataataacta 342  Q
    ||||||||||||| |||||||||||||    
T  42427879 ttctatcacctataattataataacta 42427853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 6884161 - 6884283
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  6884161 caaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttct 6884260  T
Q  320 atcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||    
T  6884261 atcacctataattataataacta 6884283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 14533228 - 14533104
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  |||| | |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  14533228 ggcaaattctatggtacacccaacaatttaaatgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 14533129  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  14533128 ctatcacctataattataataacta 14533104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 34665573 - 34665695
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| || ||||||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  34665573 caaattctatggtatacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttct 34665672  T
Q  320 atcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||    
T  34665673 atcacctataattataataacta 34665695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 4674008 - 4673884
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  4674008 ggcaaattctatggtacatccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 4673909  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  4673908 ctatcacctataattataataacta 4673884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 5091994 - 5092120
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| |||| | ||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||    
T  5091994 tatggcaaattctatggtacatctaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaa-tat 5092092  T
Q  315 tttctatcacctatgattataataacta 342  Q
    |||||||||||||| |||||||||||||    
T  5092093 tttctatcacctataattataataacta 5092120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 215 - 337
Target Start/End: Complemental strand, 15771719 - 15771597
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||  |||||||||| |||| |||||||||||||| | |||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  15771719 tatggcaaattctatagtacacccaattatttaagtgtattggtacacccaatcattaaattaatagttcaataagttattttttgtaggaaaaaattat 15771620  T
Q  315 tttctatcacctatgattataat 337  Q
    |||||||||||||| ||||||||    
T  15771619 tttctatcacctataattataat 15771597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 5389605 - 5389483
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| |||| |||   ||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  5389605 caaattctatggtacatccaccaatttgagtgtattggtacaccaaatacttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttct 5389506  T
Q  320 atcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||    
T  5389505 atcacctataattataataacta 5389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 11813600 - 11813478
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa-aaaattattttct 319  Q
    |||||||||| |||||||||  ||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||| |||| ||||||||    
T  11813600 aaattctatggtacacccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaatgtgttattttttgtaggaaaaaaaatattttct 11813501  T
Q  320 atcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||    
T  11813500 atcacctataattataataacta 11813478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 12547358 - 12547485
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||| |||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||    
T  12547358 ttttatggcaaattctatggtacacccaaagatatgagtgtattgatacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaat 12547457  T
Q  312 tattttctatcacctatgattataataa 339  Q
    ||||||||||||||||| ||||||||||    
T  12547458 tattttctatcacctataattataataa 12547485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 1353507 - 1353630
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||  ||||||||||  |||| ||||||||||||||||| |||||    
T  1353507 ggcaaattctatggtacacccaataatatgagtgtattggtacaccaaatccttaaat--atagttaaatgggttatttttttgtaggaaaaaaatattt 1353604  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  1353605 tctatcacctataattataataacta 1353630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 3383596 - 3383473
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    ||||||||||| |||| |||| ||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||||     
T  3383596 tatggcaaattttatggtacatccaaccatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagtgattttttgtaggaaaaaatta- 3383498  T
Q  315 tttctatcacctatgattataataa 339  Q
    |||||||||||||| | ||||||||    
T  3383497 tttctatcacctataactataataa 3383473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 33423420 - 33423296
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattg--atagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||| |||| | ||  |||||| |||||||||||| ||||||||||||||   |||||||||| ||||||||||||||| |||||||||||||    
T  33423420 caaattctatggtacatctaacaatttgaatgtattggtacaccaaatccttaaattataatagttaaatgagttattttttgtagaaaaaaattatttt 33423321  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  33423320 ctatcacctataattataataacta 33423296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 37083211 - 37083332
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    ||||| |||| |||| ||||  |||| |||||||||||||| | |||  ||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  37083211 aaattatatggtacatccaacaatttaagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttcta 37083310  T
Q  321 tcacctatgattataataacta 342  Q
    |||||||| |||||||||||||    
T  37083311 tcacctataattataataacta 37083332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 38963470 - 38963346
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattattt 316  Q
    |||||||| |||| |||| ||||  |||||| ||||||||||||||||||||||||||| ||||||||||  |||| ||||||||| ||||||| |||||    
T  38963470 ggcaaattgtatggtacatccaacaatttgaatgtattggtacatcaaatccttaaattaatagttaaatgggttatttttttgta-gaaaaaaatattt 38963372  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||||||| |||||||||||||    
T  38963371 tttatcacctataattataataacta 38963346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 5420241 - 5420348
Alignment:
Q  232 tacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgat 331  Q
    |||||| || |||||||||||||||||||| |||||| ||||||| ||||||||||  | ||||||||| ||  ||||||||||||||||||||||| ||    
T  5420241 tacacctaaagatttgagtgtattggtacaccaaatcattaaattaatagttaaatgtgctattttttgaagagaaaaattattttctatcacctataat 5420340  T
Q  332 tataataa 339  Q
    ||||||||    
T  5420341 tataataa 5420348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 6438586 - 6438460
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    ||||||||||||||||||| ||||| ||| ||| | |||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||    
T  6438586 ttttatggcaaattctatggtacactcaaagatat-agtgtattggtacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaat 6438488  T
Q  312 tattttctatcacctatgattataataa 339  Q
    | |||| |||||||||| ||||||||||    
T  6438487 tgttttatatcacctataattataataa 6438460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 220 - 339
Target Start/End: Original strand, 36489360 - 36489479
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||  ||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||   |||||||||| ||  ||||||||||||||    
T  36489360 caaattctattgtacacccaaagatttgagtgtattggtacactaaatcaataaattaatagttaaatgtattattttttgaagagaaaaattattttct 36489459  T
Q  320 atcacctatgattataataa 339  Q
    |||| |||| ||||||||||    
T  36489460 atcatctataattataataa 36489479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 7467114 - 7467248
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggta-------catcaaatccttaaattgatagttaaataagttattttttgtagg 304  Q
    |||| |||||||||||||| |||||||||  |||||||||||||||||       || ||||||  |||||| ||||||||||  ||||||||||| ||     
T  7467114 ttttttggcaaattctatggtacacccaaaaatttgagtgtattggtatttggtacaccaaatcaataaattaatagttaaatctgttattttttgaaga 7467213  T
Q  305 aaaaaattattttctatcacctatgattataataa 339  Q
     ||||||| ||||||||||||||| ||||||||||    
T  7467214 gaaaaattgttttctatcacctataattataataa 7467248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 216 - 339
Target Start/End: Complemental strand, 34438594 - 34438470
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtta-ttttttgtaggaaaaaattat 314  Q
    |||||||||| |||| |||| ||||| ||||||||||||||| ||| ||||||  |||||| ||||||||||  |||| ||||||| ||  |||| || |    
T  34438594 atggcaaattttatggtacatccaataatttgagtgtattggaacaccaaatcaataaattaatagttaaatgtgttatttttttgaagagaaaagttgt 34438495  T
Q  315 tttctatcacctatgattataataa 339  Q
    |||||||||||||| ||||||||||    
T  34438494 tttctatcacctataattataataa 34438470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 247 - 339
Target Start/End: Original strand, 40370494 - 40370586
Alignment:
Q  247 gagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||||||||||| | ||||||  |||||| ||||||||||  ||||||||||| ||  ||||||||||||||||||||||| ||||||||||    
T  40370494 gagtgtattggtaaaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattattttctatcacctataattataataa 40370586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 328
Target Start/End: Complemental strand, 6513670 - 6513560
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||| || ||||||||||||||||||||  |||||  |||||| ||||||||||  ||||||||||| ||   |||||| ||||    
T  6513670 ggcaaattctatggtacacctaaagatttgagtgtattggtacactaaatcaataaattaatagttaaatgtgttattttttgaagagtaaaattgtttt 6513571  T
Q  318 ctatcacctat 328  Q
    ||||| |||||    
T  6513570 ctatctcctat 6513560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 8371970 - 8371884
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaa 306  Q
    ||||||||||| |||| ||||| |||| ||||||||| |||| |||||  ||||||| |||||||||||| ||||||||||||||||    
T  8371970 caaattctatggtacatccaataatttaagtgtattgatacaccaaatttttaaattaatagttaaataaattattttttgtaggaa 8371884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 333
Target Start/End: Original strand, 30980882 - 30980996
Alignment:
Q  220 caaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttc 318  Q
    ||||||||||| ||||||||||  |||| |||||||||||||||  | || ||||||| |||||||||| |||| ||||||| || |||| ||||||||     
T  30980882 caaattctatggtacacccaatatattttagtgtattggtacattcactctttaaattaatagttaaatgagttgttttttgaagaaaaatattattttt 30980981  T
Q  319 tatcacctatgatta 333  Q
    |||||||||| ||||    
T  30980982 tatcacctataatta 30980996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 45157527 - 45157655
Alignment:
Q  215 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    |||||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| || ||||||| |||| ||||||| || |||| ||||    
T  45157527 tatggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatggttaaatgagttgttttttgaagaaaaatatta 45157626  T
Q  314 ttttctatcacctatgattataataacta 342  Q
    ||||||||||  |||  ||||||||||||    
T  45157627 ttttctatcatttatatttataataacta 45157655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 339
Target Start/End: Complemental strand, 19636478 - 19636383
Alignment:
Q  244 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||||||||||||||| || |||  |||||| ||||||||||| ||||||||||| ||  ||||||| ||||||||||||| |  |||||||||    
T  19636478 tttgagtgtattggtacaccagatcaataaattaatagttaaatatgttattttttgaagagaaaaattgttttctatcacctttatttataataa 19636383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 339
Target Start/End: Complemental strand, 19835071 - 19834976
Alignment:
Q  244 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||||||||||||||| || |||  |||||| ||||||||||| ||||||||||| ||  ||||||| ||||||||||||| |  |||||||||    
T  19835071 tttgagtgtattggtacaccagatcaataaattaatagttaaatatgttattttttgaagagaaaaattgttttctatcacctttatttataataa 19834976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 11598114 - 11598236
Alignment:
Q  218 ggcaaattctatgatacacccaatga-tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||| |||  | |||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| |||    
T  11598114 ggcaaattctatggtacactcaaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttt 11598213  T
Q  317 tctatcacctatgattataataa 339  Q
    || ||||||||| ||||||||||    
T  11598214 tccatcacctataattataataa 11598236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 37909378 - 37909500
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||  ||||| |||  ||||||||||||| ||||| | ||||   ||||| ||||||||||  ||||||||||| ||  ||||||| |||    
T  37909378 tggcaaattctatagtacactcaaaaatttgagtgtattagtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgttt 37909477  T
Q  317 tctatcacctatgattataataa 339  Q
    || ||||||||| ||||||||||    
T  37909478 tccatcacctataattataataa 37909500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 40947170 - 40947045
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| | ||||||||  |||||||||||  ||||||   | || ||||||| ||||||||||||||| ||||||| || |||| |||||||    
T  40947170 ggcaaattctatggtgcacccaatatatttgagtgtaccggtacactcactctttaaattaatagttaaataagttgttttttgaagaaaaatattattt 40947071  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  40947070 tttatcatttataattataataacta 40947045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 39620191 - 39620318
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt--gtaggaaaaaattat 314  Q
    |||||||| |||| ||||||||||  |||||||||||| |||||| | | || ||||||| ||||||||||||||| ||||||  | || |||| |||||    
T  39620191 ggcaaattttatggtacacccaatatatttgagtgtatcggtacacccactctttaaattaatagttaaataagttgtttttttagaagaaaaatattat 39620290  T
Q  315 tttctatcacctatgattataataacta 342  Q
    ||| |||||  ||| |||||||||||||    
T  39620291 tttttatcatttataattataataacta 39620318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 35896819 - 35896694
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 315  Q
    ||||||||||||| ||||| ||||  |||||||||||  |||||| | |  | ||||||| ||||||||||||||| ||||||| |||||||| ||||||    
T  35896819 ggcaaattctatggtacactcaatatatttgagtgtaccggtacacccacactttaaattaatagttaaataagttgttttttg-aggaaaaatattatt 35896721  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||  ||| |||||||||||||    
T  35896720 ttttatcatttataattataataacta 35896694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 3810792 - 3810747
Alignment:
Q  294 ttttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||    
T  3810792 ttttttgtaggaaaaaattattttctatcatctataattataataa 3810747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 20212559 - 20212439
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||| |||  |||| |||||||||||||| ||| ||   ||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  20212559 ggcaaattctatggtacactcaaaaatttaagtgtattggtacaccaa-tcaacaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 20212461  T
Q  318 ctatcacctatgattataataa 339  Q
      ||||||||| ||||||||||    
T  20212460 acatcacctataattataataa 20212439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 42046076 - 42046132
Alignment:
Q  219 gcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaat 275  Q
    |||||||||||| ||||| |||  ||||||||||||||||||| |||||||||||||    
T  42046076 gcaaattctatggtacactcaacaatttgagtgtattggtacaccaaatccttaaat 42046132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 32499149 - 32499217
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaa 285  Q
    |||||||||||||| |||||| ||  |||||||||||||| |||| ||||||  |||||| ||||||||    
T  32499149 tggcaaattctatggtacaccaaagaatttgagtgtattgatacaccaaatcaataaattaatagttaa 32499217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 37425570 - 37425514
Alignment:
Q  268 ccttaaattgatagttaaataagttattttttgtaggaaaa-aattattttctatca 323  Q
    ||||||||| |||||||||| |||||||||||| || |||| |||||||||||||||    
T  37425570 ccttaaattaatagttaaatgagttattttttgaagaaaaataattattttctatca 37425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 299
Target Start/End: Complemental strand, 8362818 - 8362731
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    ||||| |||||||||||||| ||||||||  |||||||||||  |||||| |||||  ||||||| ||| |||||  |||| ||||||    
T  8362818 ttttaaggcaaattctatgacacacccaacaatttgagtgtaccggtacaccaaattattaaattaataattaaacgagttgtttttt 8362731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 323
Target Start/End: Original strand, 21425206 - 21425319
Alignment:
Q  212 ttttatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-- 308  Q
    ||||| ||||||||||||| ||||||||||  ||||| |||||| |||||| ||| || ||||||| |||  ||||| |||| |||||| || |||||      
T  21425206 ttttaaggcaaattctatggtacacccaataaatttgggtgtatcggtacaccaattcgttaaattaata-ataaattagttgttttttataagaaaaat 21425304  T
Q  309 aattattttctatca 323  Q
    |||||||||||||||    
T  21425305 aattattttctatca 21425319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 5615378 - 5615456
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    |||||||||| |||| ||||  |||||||||||  ||||||||||||| |||||||  || | ||||||||| ||||||    
T  5615378 aaattctatggtacatccaaaaatttgagtgtaccggtacatcaaatcgttaaattattaataaaataagttgtttttt 5615456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 6945340 - 6945466
Alignment:
Q  218 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta-tt 315  Q
    ||||||||||||| |||| |||||  |||||||||||  |||||| | | |  ||||||| |||||||||| |||| ||||||| || |||| |||| ||    
T  6945340 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacccattttttaaattaatagttaaatgagttgttttttgaagaaaaatattattt 6945439  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||  ||| |||||||||||||    
T  6945440 ttttatcatttataattataataacta 6945466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 9122510 - 9122457
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatca 323  Q
    ||||||| |||||||||| |||||||||||| || |||| |||||||| |||||    
T  9122510 ttaaatttatagttaaatgagttattttttgaagaaaaatattattttttatca 9122457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 11088216 - 11088297
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    ||||||||||||| |||||||||  |||||||||||  |||||| |||||  ||||||| ||| |||||  |||| ||||||    
T  11088216 ggcaaattctatggtacacccaaatatttgagtgtaccggtacaccaaattgttaaattaataattaaaagagttgtttttt 11088297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 12071158 - 12071223
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaa 286  Q
    |||||||||| || ||||||  |||||||||||||||||||| ||||  ||||||| ||| |||||    
T  12071158 aaattctatggtatacccaacaatttgagtgtattggtacatgaaattattaaattaataattaaa 12071223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 15176342 - 15176449
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa--aattatt 315  Q
    ||||||||||||| ||||||||||  ||||||||||  ||| || |||| | ||||||| |||  ||||| | || ||||||| || ||||  |||||||    
T  15176342 ggcaaattctatggtacacccaatattttgagtgtaccggtgcaccaaagcattaaattaataagtaaattaattgttttttgaagaaaaaataattatt 15176441  T
Q  316 ttctatca 323  Q
    ||||||||    
T  15176442 ttctatca 15176449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 44144438 - 44144366
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| |||||||||  |||| ||||||| || |||| ||| |||| |||||  |||||||||||||||||    
T  44144438 ttaaattcatagttaaaggagttgttttttgaagaaaaatatttttttttatcatttatgattataataacta 44144366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 30862789 - 30862913
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  30862789 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 30862888  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  30862889 ctatcacctataattataataacta 30862913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 1691394 - 1691274
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||| |||| ||||  |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  1691394 aaattctatggtacatccaaccatttgagtgtattggtacatcaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaatta-tttcta 1691296  T
Q  321 tcacctatgattataataacta 342  Q
    |||||||| |||||||||||||    
T  1691295 tcacctataattataataacta 1691274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 38129792 - 38129667
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||| ||||||| || ||||||| ||||||||||||||||||| |||||  ||||||| |||||||||| ||||||||||||||||||||||||||||    
T  38129792 tggcaagttctatggtagacccaataatttgagtgtattggtacaccaaatttttaaattaatagttaaatgagttattttttgtaggaaaaaattattt 38129693  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  38129692 tctatcacctataattataataacta 38129667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 41913500 - 41913377
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| |||| ||||  ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  41913500 ggcaaattatatggtacatccaacaatttgagtgtattggtacaccaaatccttaaattaatagttaaataagttattttttgtaggaaaaaa-tatttt 41913402  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  41913401 ctatcacctataattataataacta 41913377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 28326684 - 28326805
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||  |||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| |    
T  28326684 aaattctatcgtacatccaataatttgagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatattttcca 28326783  T
Q  321 tcacctatgattataataacta 342  Q
    |||||||| |||||||||||||    
T  28326784 tcacctataattataataacta 28326805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 30624129 - 30624003
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||| |||||  ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  30624129 ggcaagttctatggtacacccaataatttgagtgtattggtacaccaaatttttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 30624030  T
Q  318 c--tatcacctatgattataataacta 342  Q
    |  |||||||||| |||||||||||||    
T  30624029 ctatatcacctataattataataacta 30624003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 3909922 - 3910052
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    |||| |||||||||||||| |||||||||  ||||||||||||||||||| | |||  ||||||| |||||||||| |||||||||||||||| |||||     
T  3909922 ttttttggcaaattctatggtacacccaacaatttgagtgtattggtacaccgaatttttaaattaatagttaaatgagttattttttgtagggaaaaaa 3910021  T
Q  312 tattttctatcacctatgattataataacta 342  Q
    ||||||||||||||||| |||||||||||||    
T  3910022 tattttctatcacctataattataataacta 3910052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 42710931 - 42711055
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| | ||| |||| |||| ||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  42710931 ggcaaattctatggtacatctaataatttaagtgcattggtacaccaaattcttaaattaatagttaaatgagttattttttgtaggaaaaaaatatttt 42711030  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  42711031 ctatcacctataattataataacta 42711055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 41381497 - 41381618
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| |||||| ||  |||||||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||| |||||| ||||||    
T  41381497 ggcaaattatatggtacaccaaacaatttgagtgtattggtacatcaaatctttaaagtaatagttaaatgagttattttttgtagaaaaaaaatatttt 41381596  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  41381597 ctatcacctataattataataa 41381618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 40941872 - 40942000
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagg-aaaaaatta 313  Q
    |||| ||||||||||| ||||| |||  |||||||||||||||||||  ||||| ||||||| |||||||||| |||||||||||||||| |||||| ||    
T  40941872 tatgacaaattctatggtacactcaacaatttgagtgtattggtacacaaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaaaata 40941971  T
Q  314 ttttctatcacctatgattataataacta 342  Q
    ||||||||||||||| |||||||||||||    
T  40941972 ttttctatcacctataattataataacta 40942000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 27956376 - 27956501
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaa-ttgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    |||||||||||||| |||||| ||  |||||||| |||||||||| |||||| ||||| || |||||||||| |||||||||||||||||||||| ||||    
T  27956376 tggcaaattctatggtacacctaacaatttgagtatattggtacaccaaatctttaaaattaatagttaaatgagttattttttgtaggaaaaaa-tatt 27956474  T
Q  316 ttctatcacctatgattataataacta 342  Q
    ||||||||||||| |||||||||||||    
T  27956475 ttctatcacctataattataataacta 27956501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 45857880 - 45857759
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  45857880 ggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 45857781  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  45857780 ctatcacctataattataataa 45857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 30936501 - 30936377
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||  ||||| ||||||| ||||||||||  || |||||||| ||  ||||||| |    
T  30936501 tatggtaaattctatgatacacccaaagatatgagtgtattggtacacaaaatcattaaattaatagttaaatgtgtgattttttgaagagaaaaattgt 30936402  T
Q  315 tttctatcacctatgattataataa 339  Q
    |||||||||||||| ||||||||||    
T  30936401 tttctatcacctataattataataa 30936377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 44964230 - 44964106
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    ||||||||||| |||| |||||| || |||||||||||||||||||| |||||| ||||||| |||||||||||  || ||||||| ||  |||||||||    
T  44964230 tatggcaaattatatggtacacctaaagatttgagtgtattggtacaacaaatcattaaattaatagttaaatattttgttttttgaagagaaaaattat 44964131  T
Q  315 tttctatcacctatgattataataa 339  Q
    ||| |||||||||| ||||||||||    
T  44964130 tttatatcacctataattataataa 44964106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 18990090 - 18990212
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||  ||||| |||||    
T  18990090 tggcaaattctatggtacaccaaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaaatattt 18990189  T
Q  317 tctatcacctatgattataataa 339  Q
    | |||||||||| ||||||||||    
T  18990190 tatatcacctataattataataa 18990212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 41331726 - 41331828
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||| || |||| |||||| ||  ||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  41331726 tatggcaagttttatggtacacctaacaatttgagtgtattggtacaccaaatccttaaatcaatagttaaatgagttattttttgtaggaaaaaattat 41331825  T
Q  315 ttt 317  Q
    |||    
T  41331826 ttt 41331828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 11485996 - 11486117
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||||||| ||||| || ||||||||||| |||||| ||||||| ||||||||||  ||||||||||| ||  ||||||| ||||    
T  11485996 ggcaaattctatggtacacccaaagatttaagagtattggtacaccaaatcattaaattaatagttaaatgtgttattttttgaagagaaaaattgtttt 11486095  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||| ||| ||||||||||    
T  11486096 ctatcacatataattataataa 11486117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 342
Target Start/End: Complemental strand, 21699696 - 21699574
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||| ||||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||| ||||||     |    
T  21699696 tggcgaattctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagtcattttttgtagaaaaaaaaa---t 21699600  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||||||| |||||||||||||    
T  21699599 tctatcacctataattataataacta 21699574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 23331700 - 23331805
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattg--atagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||||||| |||||  ||  ||||||||||||||||||| ||||||||||||||   |||||||||| | |||||||||||||||||||||||||    
T  23331700 ggcaaattctatggtacacttaacaatttgagtgtattggtacaccaaatccttaaattataatagttaaatgaattattttttgtaggaaaaaattatt 23331799  T
Q  316 ttctat 321  Q
    ||||||    
T  23331800 ttctat 23331805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 47748211 - 47748082
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat--t 312  Q
    ||||| ||||| |||| |||||| ||  |||||| |||||||||| | ||| |||||||||| |||||||||| |||||||||||| || |||||||  |    
T  47748211 tatgggaaattttatggtacacctaaaaatttgaatgtattggtataccaagtccttaaattaatagttaaatgagttattttttgaagaaaaaaataat 47748112  T
Q  313 attttctatcacctatgattataataacta 342  Q
    ||| |||||||||||| |||||||||||||    
T  47748111 attctctatcacctataattataataacta 47748082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 42974895 - 42975016
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||||||  || |||||| ||||||||| |||||| |||||||  |||||||||  |||||||||||  |  ||||||| ||||    
T  42974895 ggcaaattctatggtacacccaaacatatgagtgcattggtacaccaaatcattaaattagtagttaaatgtgttattttttgatgagaaaaattgtttt 42974994  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  42974995 ctatcacctataattataataa 42975016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 339
Target Start/End: Original strand, 31482378 - 31482495
Alignment:
Q  222 aattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctat 321  Q
    ||||||||| ||||| |||  ||||||||||||||||||| |||||| || |||| ||||||||||   ||| |||||| ||  |||||||  |||||||    
T  31482378 aattctatggtacactcaaatatttgagtgtattggtacaccaaatcattgaattaatagttaaatgtattagtttttgaagagaaaaattgctttctat 31482477  T
Q  322 cacctatgattataataa 339  Q
    ||||||| ||||||||||    
T  31482478 cacctataattataataa 31482495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 339
Target Start/End: Original strand, 30317220 - 30317316
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||| ||||||||||||| ||||||  |||||| ||||||||||  ||||||||||| ||  ||||||| |||| |||||||||| ||||||||||    
T  30317220 atttgggtgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttttatatcacctataattataataa 30317316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 31903490 - 31903423
Alignment:
Q  219 gcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaa 286  Q
    ||||||| ||||||||| ||||  |||||| ||||||||||||||||||||||||||| |||||||||    
T  31903490 gcaaattatatgatacatccaacaatttgaatgtattggtacatcaaatccttaaattaatagttaaa 31903423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 218 - 339
Target Start/End: Original strand, 43069080 - 43069200
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtag-gaaaaaattattt 316  Q
    |||||||| |||| |||||| || || ||||||||||||||||| |||||  ||||||| ||||  ||||  ||||||||||| || ||||||||| |||    
T  43069080 ggcaaattttatggtacacctaaagacttgagtgtattggtacaccaaattattaaattaatag--aaatgtgttattttttggagagaaaaaattgttt 43069177  T
Q  317 tctatcacctatgattataataa 339  Q
    | |||||||||| ||||||||||    
T  43069178 tttatcacctataattataataa 43069200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 216 - 339
Target Start/End: Original strand, 43750073 - 43750196
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||||||||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  |||| || ||    
T  43750073 atggcaaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagaaaatttttt 43750172  T
Q  316 ttctatcacctatgattataataa 339  Q
    | | ||||||||| ||||||||||    
T  43750173 tcccatcacctataattataataa 43750196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 342
Target Start/End: Original strand, 1806484 - 1806606
Alignment:
Q  221 aaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    |||||||||| ||||| ||||  |||||||||||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||||||| |    
T  1806484 aaattctatggtacactcaatatatttgagtgtaccggtacacctactctttaaattaatagttaaataagttgttttttgaagaaaaatattatttttt 1806583  T
Q  320 atcacctatgattataataacta 342  Q
    ||||  ||| |||||||||||||    
T  1806584 atcatttataattataataacta 1806606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 3214571 - 3214640
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||||| ||||||||||||||||||||||| || |||| |||||||| |||||  ||||||||||||||    
T  3214571 ttaaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttatgattataataa 3214640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 45458698 - 45458761
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatag 281  Q
    ||||||||||||| |||||||||  |||| |||||||||||||| |||||||||||||| ||||    
T  45458698 ggcaaattctatgttacacccaacaatttaagtgtattggtacaccaaatccttaaattaatag 45458761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 342
Target Start/End: Original strand, 41809228 - 41809325
Alignment:
Q  244 tttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    |||||||||||||||||| |||||| |||||||  |||||||||   |||||||||| ||  |||||||  ||||||||| |||| |||||||||||||    
T  41809228 tttgagtgtattggtacaccaaatcattaaattagtagttaaatgtattattttttgaagagaaaaatt-gtttctatcatctataattataataacta 41809325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 35291733 - 35291608
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||||||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||| || |||| |||||||    
T  35291733 ggcaaattctatgacacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgagttgttttttgaagaaaaatattattt 35291634  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||  |||  ||||||||||||    
T  35291633 tctatcatttatatttataataacta 35291608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 339
Target Start/End: Complemental strand, 8770773 - 8770655
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| ||||| ||| || || | |||||||||||| |||||| ||||||| ||||||||||  ||||     || ||  ||||||| |    
T  8770773 tatggcaaattctatg-tacacacaaagaattaactgtattggtacaccaaatcattaaattaatagttaaatgtgtta-----tgaagagaaaaattgt 8770680  T
Q  315 tttctatcacctatgattataataa 339  Q
    |||||||||||||| ||||||||||    
T  8770679 tttctatcacctataattataataa 8770655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 20439196 - 20439100
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    ||||||||||||||||||| | ||||   ||||| ||| ||||||  ||||||||||| ||  ||||||| |||||||||| |||| ||||||||||    
T  20439196 atttgagtgtattggtacacccaatcaacaaattaataattaaatgtgttattttttgaagagaaaaattgttttctatcatctataattataataa 20439100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 2290787 - 2290890
Alignment:
Q  215 tatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    |||||| ||||||||| |||||||||   |||||||||||  |||||| ||||  |||||||| |||||||||| |||| ||||||| || |||| ||||    
T  2290787 tatggccaattctatggtacacccaacatatttgagtgtaccggtacaccaaacacttaaatttatagttaaatgagttgttttttgaagaaaaatatta 2290886  T
Q  314 tttt 317  Q
    ||||    
T  2290887 tttt 2290890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 35357701 - 35357826
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||| |||||  |||||||||||  ||||||   | || ||||||| || ||||||| |||| ||||||| || |||| |||||||    
T  35357701 ggcaaattctatggtacatccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgagttgttttttgaagaaaaatattattt 35357800  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||  |||  ||||||||||||    
T  35357801 tctatcatttatatttataataacta 35357826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 47369626 - 47369501
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||||||||  |||||||||||  | ||||   | || ||||||| ||||||||||||||| ||||||| |  |||| ||| |||    
T  47369626 ggcaaattctatggtacacccaatatatttgagtgtaccgatacactcactctttaaattcatagttaaataagttgttttttgaaaaaaaatatttttt 47369527  T
Q  317 tctatcacctatgattataataacta 342  Q
    | |||||  ||| |||||||||||||    
T  47369526 tttatcatttataattataataacta 47369501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 15715904 - 15716004
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||||||| |  |||||||||||  |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| |||||||    
T  15715904 ggcaaattctatggtacacccactatatttgagtgtaccggtacacccactctttaaattcatagttaaatgagttgttttttgaagaaaaatattattt 15716003  T
Q  317 t 317  Q
    |    
T  15716004 t 15716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 323
Target Start/End: Original strand, 47219955 - 47220062
Alignment:
Q  217 tggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattat 314  Q
    |||||||||||||| ||||||||||  ||||| |||||| |||||| |||||| | ||||| |||  ||||| |||| ||||||| || |||| ||||||    
T  47219955 tggcaaattctatggtacacccaataaatttgggtgtatcggtacaccaaatcgtaaaattaata-ataaatgagtttttttttgaagaaaaataattat 47220053  T
Q  315 tttctatca 323  Q
    |||||||||    
T  47220054 tttctatca 47220062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 6791844 - 6791737
Alignment:
Q  218 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagtt-attttttgtaggaaaaaattatt 315  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| ||||  ||||||| || |||| ||||||    
T  6791844 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttgtttttttgaagaaaaatattatt 6791745  T
Q  316 ttctatca 323  Q
    ||||||||    
T  6791744 ttctatca 6791737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 41968829 - 41968722
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 315  Q
    ||||||||||||| |||||| |||  |||||||||||| ||||||   | || ||||||| || ||||||| |||||||||||  | |||||| ||||||    
T  41968829 ggcaaattctatggtacacctaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttatttttttgaagaaaaatattatt 41968730  T
Q  316 ttctatca 323  Q
    ||||||||    
T  41968729 ttctatca 41968722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 323
Target Start/End: Complemental strand, 9682434 - 9682325
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgt--aggaaaaaatta 313  Q
    |||||||||| |||| | || ||||  |||||||||||  |||||| |||||| ||||||| ||| |||||| |||| | ||||||  |  |||||||||    
T  9682434 atggcaaattttatggtgcatccaaaaatttgagtgtaccggtacaccaaatcattaaattaataattaaatgagttgtgttttgtgaaaaaaaaaatta 9682335  T
Q  314 ttttctatca 323  Q
    ||||||||||    
T  9682334 ttttctatca 9682325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 11750828 - 11750706
Alignment:
Q  218 ggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||| ||||||||||||| |  ||||||||||| |||||||   | || ||||||| |||||||||| |||| ||||||  |  |||| |||||||    
T  11750828 ggcaaattatatgatacacccactctatttgagtgtactggtacactcactctttaaatttatagttaaatgagttgtttttttaaaaaaaatattattt 11750729  T
Q  317 tctatcacctatgattataataa 339  Q
    | |||||  ||| ||||||||||    
T  11750728 tttatcatttataattataataa 11750706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 337
Target Start/End: Complemental strand, 15584899 - 15584826
Alignment:
Q  264 aaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattattttctatcacctatgattataat 337  Q
    ||||||||||||| |||||||||| |||| |||||| || ||||| ||||||||| ||||  |||||||||||||    
T  15584899 aaatccttaaatttatagttaaatgagtttttttttttaagaaaataattattttttatc-tctatgattataat 15584826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 29682070 - 29682164
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    |||||||||||| |||||||||| || |||| || |||  ||||| |||| ||||||| || |||| |||||||| |||||  ||| ||||||||    
T  29682070 atttgagtgtatcggtacatcaactctttaattttataagtaaatgagttgttttttgaagaaaaatattattttttatcatttataattataat 29682164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 30891277 - 30891405
Alignment:
Q  217 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgt--aggaaaaaatta 313  Q
    |||||||||||||| |||| |||||  ||||||||||| |||||||   | || ||||||| || ||||||| |||| |||||| |  || |||| ||||    
T  30891277 tggcaaattctatggtacatccaatatatttgagtgtactggtacactcactctttaaattaatggttaaatgagttgttttttttgaagaaaaatatta 30891376  T
Q  314 ttttctatcacctatgattataataacta 342  Q
    ||||||||||  |||  ||||||||||||    
T  30891377 ttttctatcatttatatttataataacta 30891405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 7527072 - 7527128
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    ||||||||||||||||| | ||||  |||||||| |||||||||| |||| ||||||    
T  7527072 atttgagtgtattggtataccaaactcttaaattaatagttaaatgagttttttttt 7527128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 26413961 - 26413889
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| ||||||||||||||| ||||||| || |||  |||||||| |||||  ||| ||| |||||||||    
T  26413961 ttaaattaatagttaaataagttgttttttgaagaaaattattattttttatcatttataattctaataacta 26413889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 30076657 - 30076741
Alignment:
Q  216 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    ||||||||||||||| |||||||| |  ||||||||||| | |||||  || || ||||||| |||||||||| |||| ||||||    
T  30076657 atggcaaattctatggtacacccactatatttgagtgtactagtacactaactctttaaattcatagttaaatgagttttttttt 30076741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 1e-42; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 13390385 - 13390509
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  13390385 ggcaagttctatggtacacccaacaatttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 13390484  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  13390485 ctatcacctataattataataacta 13390509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 26358959 - 26358835
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||  ||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  26358959 ggcaagttctatggtacacccaacaatttgagtgtattggtacaccaaacccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 26358860  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  26358859 ctatcacctataattataataacta 26358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 32834180 - 32834056
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||| |||||| ||||||| |||||| ||| |||||||||||||||||||||||||||||    
T  32834180 ggcaaattctatggtacacctaataatttgagtgtattggtacaccaaatcattaaattaatagttcaatgagttattttttgtaggaaaaaattatttt 32834081  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  32834080 ctatcacctataattataataacta 32834056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 17545607 - 17545728
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| |||||||||  ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  17545607 caaattctatggtacacccaacaatttgagtgtattggtacaccaaattcttaaattaatagttaaataagttattttttgtaggaaaaaa-tattttct 17545705  T
Q  320 atcacctatgattataataacta 342  Q
    ||||||||| |||||||||||||    
T  17545706 atcacctataattataataacta 17545728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 6848508 - 6848634
Alignment:
Q  216 atggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    ||||||||||||||| |||||||||  ||||||||| ||||||| |  ||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  6848508 atggcaaattctatggtacacccaacaatttgagtgcattggtatacaaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaatatt 6848607  T
Q  316 ttctatcacctatgattataataacta 342  Q
    ||||||||||||| |||||||||||||    
T  6848608 ttctatcacctataattataataacta 6848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 4110551 - 4110675
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| |||||||||| |||| | | ||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  4110551 ggcaagttctatggtacacccaataatttaaatatattggtacactaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 4110650  T
Q  318 ctatcacctatgattataataacta 342  Q
    |||||||||||  ||||||||||||    
T  4110651 ctatcacctatagttataataacta 4110675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 24212912 - 24213035
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| ||||  |||||||||||||||||||  ||||||||||||| |||||||||| ||| |||||||||| |||||||||| |||    
T  24212912 ggcaaattctatggtacatccaaccatttgagtgtattggtacactaaatccttaaattaatagttaaatgagtgattttttgtaagaaaaaatta-ttt 24213010  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||||||||||||    
T  24213011 ctatcacctataattataataacta 24213035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 232 - 342
Target Start/End: Complemental strand, 24487679 - 24487569
Alignment:
Q  232 tacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgat 331  Q
    |||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||| |||||||||| ||||||| ||||||||| ||    
T  24487679 tacacccaacaatttgagtgtattggtacaccaaatctttaaattaatagttaaatgagttattttttataggaaaaaaatattttccatcacctataat 24487580  T
Q  332 tataataacta 342  Q
    |||||||||||    
T  24487579 tataataacta 24487569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 8401822 - 8401699
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| |||| ||||  ||||||||||||| ||||| |||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||    
T  8401822 ggcaaattatatggtacatccaaccatttgagtgtattcgtacaccaaatctttaaattaatagttaaatgagttattttttgtaggaaaaaatta-ttt 8401724  T
Q  318 ctatcacctatgattataataacta 342  Q
    ||||||||||| |||| ||||||||    
T  8401723 ctatcacctataattaaaataacta 8401699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 2258905 - 2259028
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt-ttc 318  Q
    ||||||||||| |||||||||  |||||||||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||||  |   |||    
T  2258905 caaattctatggtacacccaacaatttgagtgtattggtacactaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaaaaaaaattc 2259004  T
Q  319 tatcacctatgattataataacta 342  Q
    |||||||||| |||||||||||||    
T  2259005 tatcacctataattataataacta 2259028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 339
Target Start/End: Original strand, 11446733 - 11446857
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||  |||||| ||||||||||  ||||||||||| ||  ||||||| |    
T  11446733 tatggcaaattctatggtacacccaaagatatgagtgtattggtacaccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgt 11446832  T
Q  315 tttctatcacctatgattataataa 339  Q
    ||||||||| |||| ||||||||||    
T  11446833 tttctatcatctataattataataa 11446857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 4901330 - 4901233
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    |||||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||||||||| |||||||||| |||||| |||||||||||||    
T  4901330 atttgagtgtattggtacattaaatccttaaattaatagttaaatgaatta-tttttgtaggaaaaaa-tattttctatgacctataattataataacta 4901233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 1096221 - 1096331
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||| ||||||| ||||||||||  ||| | ||||||||||||  ||||| ||||||| |||||||||| ||||||||||||||| |||||||||||||    
T  1096221 ggcaagttctatggtacacccaatatttttattgtattggtacactaaatctttaaattaatagttaaatgagttattttttgtagaaaaaaattatttt 1096320  T
Q  318 ctatcacctat 328  Q
    | |||||||||    
T  1096321 cgatcacctat 1096331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 34196215 - 34196094
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| ||||| |||  |||||||||||||| |  ||||||||  |||||| ||||||||||| ||||||||||  ||  ||||||||||||    
T  34196215 ggcaaattttatggtacactcaaaaatttgagtgtattgattaatcaaatcaataaattaatagttaaatatgttatttttttaagagaaaaattatttt 34196116  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||||||||| ||||||||||    
T  34196115 ctatcacctataattataataa 34196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 4509429 - 4509555
Alignment:
Q  217 tggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatt 315  Q
    |||||||||||||| |||||| |||  |||||||||||  |||||| | | || ||||||| ||||||||||||||||||||||| || |||| ||||||    
T  4509429 tggcaaattctatggtacacctaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattatt 4509528  T
Q  316 ttctatcacctatgattataataacta 342  Q
    || |||||  ||| |||||||||||||    
T  4509529 ttttatcatttataattataataacta 4509555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 15383610 - 15383489
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    |||||||| |||| |||| ||||  ||||||||||||||||| | ||||||  ||||||  |||||||||| ||||||||||| ||  ||||||||||||    
T  15383610 ggcaaattatatggtacatccaaaaatttgagtgtattggtataccaaatcagtaaattattagttaaatatgttattttttgaagagaaaaattatttt 15383511  T
Q  318 ctatcacctatgattataataa 339  Q
    ||||| | ||| |||| |||||    
T  15383510 ctatcgcttataattacaataa 15383489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 8549967 - 8549855
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaa 310  Q
    |||| |||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| |||||||||||| || |||| |    
T  8549967 ttttttggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttattttttgaagaaaaata 8549868  T
Q  311 ttattttctatca 323  Q
    |||||||||||||    
T  8549867 ttattttctatca 8549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 338
Target Start/End: Complemental strand, 30020761 - 30020644
Alignment:
Q  221 aaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttcta 320  Q
    |||||||||| |||| ||||   ||||||||||||| || | ||||||  |||||| ||||||||||  ||||||||||| ||  |||||||  ||||||    
T  30020761 aaattctatggtacatccaaaagtttgagtgtattgatataccaaatcaataaattaatagttaaatgtgttattttttgaagagaaaaattgctttcta 30020662  T
Q  321 tcacctatgattataata 338  Q
    |||||||| |||||||||    
T  30020661 tcacctataattataata 30020644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 216 - 317
Target Start/End: Original strand, 9661750 - 9661852
Alignment:
Q  216 atggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattat 314  Q
    ||||||||||||||| ||||||||||  |||||||||||  |||||| | | || ||||||| |||||||||| |||| ||||||| || |||| |||||    
T  9661750 atggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgagttgttttttgaagaaaaatattat 9661849  T
Q  315 ttt 317  Q
    |||    
T  9661850 ttt 9661852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 338
Target Start/End: Original strand, 33573994 - 33574119
Alignment:
Q  213 tttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatt 312  Q
    ||||||||||||| |||| |||| |||   |||||||| ||  |||||| | | || ||||||| ||||||||||||||| ||||||| || |||| |||    
T  33573994 tttatggcaaattatatggtacatccatatatttgagtataccggtacacctactctttaaattaatagttaaataagtttttttttgaagaaaaatatt 33574093  T
Q  313 attttctatcacctatgattataata 338  Q
    ||||| |||||  ||| |||||||||    
T  33574094 attttttatcatttataattataata 33574119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 6265340 - 6265225
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| |||| | ||  |||||||||||||| |||  ||||||  |||||| |||||| |||  ||||||||||| ||  ||||||| ||||    
T  6265340 ggcaaattctatggtacatctaaaaatttgagtgtattgataccccaaatcaataaattaatagtttaatgtgttattttttgaagagaaaaattgtttt 6265241  T
Q  318 ctatcacctatgatta 333  Q
    ||||||| ||| ||||    
T  6265240 ctatcacatataatta 6265225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 17010360 - 17010482
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||||  ||   ||||  |||||| ||||| ||| ||  |||||| ||||||||||  ||||||||||| ||  ||||||| |||    
T  17010360 tggcaaattctatgctacactaaaatttttggatgtattagtacaccaattcaataaattaatagttaaatgtgttattttttgaagagaaaaattgttt 17010459  T
Q  317 tctatcacctatgattataataa 339  Q
    | |||||||||| ||||||||||    
T  17010460 tatatcacctataattataataa 17010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 33574588 - 33574451
Alignment:
Q  207 gtaagttttatggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtagga 305  Q
    |||| |||| |||||||||||||| |||||||| |  |||||||||||| || |||   | || ||||||| |||||||||| |||| ||||||  | ||    
T  33574588 gtaatttttttggcaaattctatggtacacccactatatttgagtgtatcggcacactcactctttaaattcatagttaaatgagttgtttttttgaaga 33574489  T
Q  306 aaaa-attattttctatcacctatgattataataacta 342  Q
    |||| |||||||| |||||  ||| |||||||||||||    
T  33574488 aaaatattattttttatcatttataattataataacta 33574451  T

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Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 243240 - 243168
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| |||||||||| |||| ||||||| || |||| |||||||| |||||  ||| |||||||||||||    
T  243240 ttaaattaatagttaaatgagttgttttttgaagaaaaatattattttttatcatttataattataataacta 243168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 339
Target Start/End: Complemental strand, 8376405 - 8376309
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataa 339  Q
    |||||| |||||||||||| ||| ||  ||||||  |||||||||  ||||||||||| ||  ||||||| |||||||| | |||| ||||||||||    
T  8376405 atttgaatgtattggtacaccaagtcaataaattattagttaaatgtgttattttttgaagagaaaaattgttttctattatctataattataataa 8376309  T

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Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 11763527 - 11763455
Alignment:
Q  270 ttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||| ||||||||||||||| ||||||| || |||| ||||||||  ||||  ||| |||||||||||||    
T  11763527 ttaaattaatagttaaataagttgttttttgaagaaaaatattatttttgatcatttataattataataacta 11763455  T

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Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 299
Target Start/End: Original strand, 21181133 - 21181220
Alignment:
Q  212 ttttatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttatttttt 299  Q
    ||||| ||||||||||||| ||||| |||  |||||||||||| |||||| |||||| | ||||| ||| | ||| ||||| ||||||    
T  21181133 ttttaaggcaaattctatggtacactcaaaaatttgagtgtatcggtacaccaaatcatcaaatttatattgaaacaagttgtttttt 21181220  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 13719112 - 13719194
Alignment:
Q  219 gcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttg 300  Q
    |||||||||| | |||||||||   |||||||||||  ||||||  | ||||||||||| |||||||||| ||||||||||||    
T  13719112 gcaaattctacggtacacccaacatatttgagtgtaccggtacactagatccttaaatttatagttaaatgagttattttttg 13719194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 323
Target Start/End: Original strand, 16892903 - 16893009
Alignment:
Q  218 ggcaaattctatgatacacccaatgattt-gagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| |||||||||   ||| |||||||  ||| || |||| | ||||||| ||| |||||| |||| ||||||| || ||||||| ||||    
T  16892903 ggcaaattctatggtacacccaaaatttttgagtgtaccggtgcaccaaacctttaaattaataattaaattagttgttttttgaagaaaaaaatcattt 16893002  T
Q  317 tctatca 323  Q
    |||||||    
T  16893003 tctatca 16893009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 342
Target Start/End: Original strand, 9686776 - 9686901
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||| ||||  ||||||||||||  |||||   | || ||||||| |  ||||||| ||||  |||||| ||||||| |||||||    
T  9686776 ggcaaattctatggtacactcaatatatttgagtgtatcagtacactcactctttaaattaacggttaaatgagttgctttttgaaggaaaatattattt 9686875  T
Q  317 tctatcacctatgattataataacta 342  Q
    |||||||  |||  ||||||||||||    
T  9686876 tctatcatttatatttataataacta 9686901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 7344725 - 7344673
Alignment:
Q  215 tatggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaat 267  Q
    |||||||||||||||| |||||||||  |||||||||||  |||||| |||||    
T  7344725 tatggcaaattctatggtacacccaacaatttgagtgtaccggtacaccaaat 7344673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 243 - 342
Target Start/End: Original strand, 48035 - 48134
Alignment:
Q  243 atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataataacta 342  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  48035 atttgagtgtattggtacaccaaatccttaaattaatagttaaatgatttattttttgtaggaaaaaaatattttctatcacctataattataataacta 48134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 218 - 342
Target Start/End: Complemental strand, 37015 - 36891
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattatttt 317  Q
    ||||||||||||| ||||| |||  |||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  37015 ggcaaattctatggtacactcaacaatttgagtgtattgatacaccaaatccttaaattaatagttaaatgagttattttttgtagaaaaaaaatatttt 36916  T
Q  318 ctatcacctatgattataataacta 342  Q
      ||||||||| |||||||||||||    
T  36915 tcatcacctataattataataacta 36891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 217 - 339
Target Start/End: Complemental strand, 6670 - 6548
Alignment:
Q  217 tggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||| ||||||  |||||| ||||||||||| ||||||||||| ||  ||||| |||||    
T  6670 tggcaaattctatggtacaccaaaaaatttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaaatattt 6571  T
Q  317 tctatcacctatgattataataa 339  Q
    | |||||||||| ||||||||||    
T  6570 tatatcacctataattataataa 6548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 3436 - 3314
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattt 316  Q
    ||||||||||||| ||||||||||  |||||||||||   ||||| | | || ||||||| ||||||||||||||||||||||| || |||| |||||||    
T  3436 ggcaaattctatggtacacccaatatatttgagtgtaccagtacacctactctttaaattaatagttaaataagttattttttgaagaaaaatattattt 3337  T
Q  317 tctatcacctatgattataataa 339  Q
    | |||||  ||| ||||||||||    
T  3336 tttatcatttataattataataa 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 339
Target Start/End: Original strand, 2022 - 2141
Alignment:
Q  220 caaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttct 319  Q
    ||||||||||| ||||| |||  ||||||||||||||||||| | ||||   ||||| ||||||||||   |||||||||| ||  ||||||| |||||     
T  2022 caaattctatggtacactcaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtcttattttttgaagagaaaaattgttttcc 2121  T
Q  320 atcacctatgattataataa 339  Q
    ||||||||| ||||||||||    
T  2122 atcacctataattataataa 2141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 29259 - 29362
Alignment:
Q  232 tacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgat 331  Q
    |||||||||  ||||||||||||||||||| | ||||   ||||| ||||||||||  ||||||||||| ||  | ||||| ||||| ||||||||| ||    
T  29259 tacacccaaaaatttgagtgtattggtacacccaatcaacaaattaatagttaaatgtgttattttttgaagagagaaattgttttccatcacctataat 29358  T
Q  332 tata 335  Q
    ||||    
T  29359 tata 29362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 45761 - 45862
Alignment:
Q  218 ggcaaattctatgatacacccaatg-atttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaa-attatt 315  Q
    ||||||||||||| |||| ||||   |||||||||||| | ||||||||||| ||||||| |||||||| | |||| ||||||  |||||||| ||||||    
T  45761 ggcaaattctatggtacatccaaaatatttgagtgtatcgatacatcaaatctttaaattaatagttaagtgagttgtttttttaaggaaaaatattatt 45860  T
Q  316 tt 317  Q
    ||    
T  45861 tt 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 323
Target Start/End: Complemental strand, 250 - 139
Alignment:
Q  213 tttatggcaaattctatgatacacccaa-tgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaat 311  Q
    |||||||||||||||||| |||||||||   |||||||||||  |||||| |||  | |||| || |||| ||||| |||| ||||||| || |||| ||    
T  250 tttatggcaaattctatggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgagttgttttttgaagaaaaatat 151  T
Q  312 tattttctatca 323  Q
    |||||| |||||    
T  150 tattttttatca 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 47981 - 47875
Alignment:
Q  218 ggcaaattctatgatacacccaatgatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaa-aattattt 316  Q
    ||||||||||||| |||||  ||  |||||||||||  |||||| |||||| ||||||| | | |||||| |||| |||||||| | |||| ||||||||    
T  47981 ggcaaattctatggtacacttaaaaatttgagtgtaccggtacaccaaatcgttaaattcacaattaaatgagttgttttttgttgaaaaataattattt 47882  T
Q  317 tctatca 323  Q
    | |||||    
T  47881 tttatca 47875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 323
Target Start/End: Complemental strand, 16992 - 16883
Alignment:
Q  215 tatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    |||||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| || | ||||||  || |||  ||||    
T  16992 tatggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagatgtttttttaagaaaattatta 16893  T
Q  314 ttttctatca 323  Q
    ||||||||||    
T  16892 ttttctatca 16883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 32617 - 32682
Alignment:
Q  272 aaattgatagttaaataagttattttttgtaggaaaaaattattttctatcacctatgattataat 337  Q
    ||||| ||||||||||||||| ||||||| || |||| |||||||| |||||  ||| ||||||||    
T  32617 aaatttatagttaaataagttgttttttgaagaaaaatattattttttatcatgtataattataat 32682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 323
Target Start/End: Original strand, 55852 - 55961
Alignment:
Q  215 tatggcaaattctatgatacacccaat-gatttgagtgtattggtacatcaaatccttaaattgatagttaaataagttattttttgtaggaaaaaatta 313  Q
    |||||||||||||||| ||||||||||  |||||||||||| ||||||   | || ||||||| || ||||||| || | ||||||  || |||  ||||    
T  55852 tatggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagatgtttttttaagaaaattatta 55951  T
Q  314 ttttctatca 323  Q
    ||||||||||    
T  55952 ttttctatca 55961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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