View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11106_high_18 (Length: 202)
Name: NF11106_high_18
Description: NF11106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11106_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 10930911 - 10931083
Alignment:
| Q |
11 |
gagagagaagaaaggtggaaaagaaggtgagtagataagtctacgccatgagtgacatactttgaagagaagagaagggttgattgaagatagacaaagt |
110 |
Q |
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| T |
10930911 |
gagagaaaagaaaggtggaaaagaaggtgagtagataagtctacgccatgagtgacatactttgaagagaagagaagggttgattgaagatagacaaagt |
10931010 |
T |
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| Q |
111 |
tgagctatgtgatcaggaagacctggtatgagaagatcatgttgatggttgtggtggtgatggtagtgtttat |
183 |
Q |
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| T |
10931011 |
tgagctatgtgatcaggaagacctggtatgagaagatcatgttgatggttgtggtggtgatggtagtgtttat |
10931083 |
T |
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