View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11108_low_14 (Length: 317)
Name: NF11108_low_14
Description: NF11108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11108_low_14 |
 | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold1335 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 4627707 - 4627419
Alignment:
| Q |
19 |
aagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacct |
118 |
Q |
| |
|
||||||||||||||||| ||||||| |||| |||||||||||||||| | ||||||| ||||||||| | |||||||||| ||| ||||||||||||| |
|
|
| T |
4627707 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattacttcaccttagaggctttcacataacct |
4627608 |
T |
|
| Q |
119 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4627607 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
4627508 |
T |
|
| Q |
219 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4627507 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttg |
4627419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 307
Target Start/End: Original strand, 4258745 - 4259035
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
4258745 |
aaaagccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataac |
4258844 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || | |||| |
|
|
| T |
4258845 |
ctttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagat |
4258944 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
307 |
Q |
| |
|
||| | || ||| | ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4258945 |
ggtctgactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttg |
4259035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 17 - 290
Target Start/End: Complemental strand, 4623866 - 4623593
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| |||||| ||||||||| | ||||| |||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
4623866 |
aaaagccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataac |
4623767 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
||||| |||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| || |||| |||||||||||| |||||| |
|
|
| T |
4623766 |
ctttggtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagat |
4623667 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaa |
290 |
Q |
| |
|
|||||||||||| | ||||||||||| ||||||| |||||||||||||||||||||| | |||||||| ||||| |
|
|
| T |
4623666 |
ggtttaacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaa |
4623593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 22 - 306
Target Start/End: Complemental strand, 4594564 - 4594280
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
|||||||||||||| |||||| |||| |||||| ||||| ||| | ||||| ||||| ||||| ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
4594564 |
ccacatgctgtgttgattccagctccacttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcacataacctttg |
4594465 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| || ||||| |||||| ||||||||||||||| | |
|
|
| T |
4594464 |
tcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccataccagatggtct |
4594365 |
T |
|
| Q |
222 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
306 |
Q |
| |
|
||||||| | ||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||| | |||||| |
|
|
| T |
4594364 |
aacaccaatggaaggtgatggtgatgttagtcaagacataccctctcttgctcaatctataagaaagaatttccttaaacccttt |
4594280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 19 - 290
Target Start/End: Complemental strand, 4517897 - 4517626
Alignment:
| Q |
19 |
aagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacct |
118 |
Q |
| |
|
||||||||||| ||| ||| |||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||| |||| ||| ||||||||||||| |
|
|
| T |
4517897 |
aagccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacct |
4517798 |
T |
|
| Q |
119 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
218 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| || |||||||| |
|
|
| T |
4517797 |
ttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatgg |
4517698 |
T |
|
| Q |
219 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaa |
290 |
Q |
| |
|
|||||| || ||||||| ||||| ||||||| ||||||||| ||||||||| | |||||||||||||| |
|
|
| T |
4517697 |
tttaactccgatagaaggcgatggtgatgttagtcaagacattatctctctttccgattcaataagaaagaa |
4517626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 4558684 - 4558405
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||||||||| ||| ||||||||||| |
|
|
| T |
4558684 |
aaaaaccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataac |
4558585 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
|| ||| |||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||| || || ||| |
|
|
| T |
4558584 |
ctatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggat |
4558485 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
296 |
Q |
| |
|
|||||||| ||| || |||||||||||||||| ||||||||| | |||||| | ||||||| |||||||||||||| |
|
|
| T |
4558484 |
ggtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcct |
4558405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 4618855 - 4618580
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
||||||| |||| | ||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
4618855 |
ccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttg |
4618756 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
| ||||| ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||| || |||| |||||||| ||| ||||||||||| |
|
|
| T |
4618755 |
ttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattccagatggttt |
4618656 |
T |
|
| Q |
222 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
297 |
Q |
| |
|
||||||| | ||||||||||| ||||||| |||||| |||| |||||| ||||||| ||||||||||||||||| |
|
|
| T |
4618655 |
aacaccaatggaaggtgatggtgatgttagtcaagatgtaccaactctttgtcaatcagtaagaaagaacttcctt |
4618580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 270
Target Start/End: Complemental strand, 4576014 - 4575761
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
||||||||||||| ||||||| ||||| ||||| |||||||||||||||| | ||||||||| ||||||| || |||||||||| ||| ||||||||||| |
|
|
| T |
4576014 |
aaaagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttcaccttagaggctttcacataac |
4575915 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||| |
|
|
| T |
4575914 |
ctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagat |
4575815 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctt |
270 |
Q |
| |
|
|||||||| ||| || ||| |||| ||||| | ||||||| ||| ||||||| |
|
|
| T |
4575814 |
ggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctctt |
4575761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 22 - 250
Target Start/End: Complemental strand, 4507465 - 4507237
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||||||||||||||| | ||||| |||||||| ||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
4507465 |
ccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagcttcttcaccttcgaggctttcacataacctttg |
4507366 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
4507365 |
ttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaactttgagactctaccagatggttt |
4507266 |
T |
|
| Q |
222 |
aacaccactagaaggtgatggcgatgtta |
250 |
Q |
| |
|
||| ||| | || |||||||| ||||||| |
|
|
| T |
4507265 |
aactccaatggatggtgatggtgatgtta |
4507237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 281
Target Start/End: Complemental strand, 3173557 - 3173298
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
|||||||| ||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||| || |||||| ||| ||| |||||||||||||||| |
|
|
| T |
3173557 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
3173458 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |
|
|
| T |
3173457 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaactttgagactataccagatggttt |
3173358 |
T |
|
| Q |
222 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaat |
281 |
Q |
| |
|
||| || | ||||||||||| ||||||| ||||||| ||| | |||||| || |||||| |
|
|
| T |
3173357 |
aacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaat |
3173298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 4488767 - 4489006
Alignment:
| Q |
18 |
aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacc |
117 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||| |||||||||||||||| | ||||||||||||| ||| || |||||||||| ||| |||||||||||| |
|
|
| T |
4488767 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggatttcacataacc |
4488866 |
T |
|
| Q |
118 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||| || ||||||| |
|
|
| T |
4488867 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattccagatg |
4488966 |
T |
|
| Q |
218 |
gtttaacaccactagaaggtgatggcgatgttactcaaga |
257 |
Q |
| |
|
||||||| ||| ||| |||||||||||||||| |||||| |
|
|
| T |
4488967 |
gtttaactccaacagatggtgatggcgatgttagtcaaga |
4489006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 281
Target Start/End: Complemental strand, 4482424 - 4482160
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
|||| |||||||| ||||| | ||||| |||||||||||||||||||||| | ||||||||| ||| ||| || |||||||||| ||| ||||||||||| |
|
|
| T |
4482424 |
aaaaaccacatgcagtgttgactccatttccagctcaaggccatatcaatgcattgttgaaaataggaaaactacttcaccttagaggctttcacataac |
4482325 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| || ||||||||| |
|
|
| T |
4482324 |
ctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagat |
4482225 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaat |
281 |
Q |
| |
|
|||||||| ||| | |||||||||| || || | ||||||| || ||||||| |||||||||| |
|
|
| T |
4482224 |
ggtttaactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaat |
4482160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 17 - 260
Target Start/End: Complemental strand, 4572525 - 4572282
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| |||||||||||||||| | |||||| |||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
4572525 |
aaaaaccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataac |
4572426 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
|| ||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||| |||||||| || |||||| |
|
|
| T |
4572425 |
ctatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagat |
4572326 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcgatgttactcaagacat |
260 |
Q |
| |
|
|||||| | ||| || || ||||||||||||| ||||||||| |
|
|
| T |
4572325 |
ggtttatctccaacggatggcgatggcgatgttagtcaagacat |
4572282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 307
Target Start/End: Original strand, 4265627 - 4265916
Alignment:
| Q |
18 |
aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacc |
117 |
Q |
| |
|
|||||||||||||||||| |||||| |||| |||||||||||||||| | ||||| || |||| ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
4265627 |
aaagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagaggctttcacataacc |
4265726 |
T |
|
| Q |
118 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
217 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||||| ||| |||| ||||||||||||||||||| |
|
|
| T |
4265727 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccataccagatg |
4265826 |
T |
|
| Q |
218 |
gtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
307 |
Q |
| |
|
|| |||| ||| | ||||| |||| |||| ||||||||||||| | ||||| |||||||| | | |||||||||||| ||||||| |
|
|
| T |
4265827 |
gtctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcaaccctttg |
4265916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 4581573 - 4581294
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
||||||||||||| ||||| |||||||||||| |||||| ||||||| | | || | | ||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
4581573 |
aaaagccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataac |
4581474 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||| ||| || |||||||||||| ||||||||||||||||| || |||||| |
|
|
| T |
4581473 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagat |
4581374 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
296 |
Q |
| |
|
|||||||| || ||||||| ||| | ||||||| |||||||||| |||| | | ||||||| |||||||||||||| |
|
|
| T |
4581373 |
ggtttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcct |
4581294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 25 - 296
Target Start/End: Complemental strand, 4587183 - 4586912
Alignment:
| Q |
25 |
catgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgtca |
124 |
Q |
| |
|
|||||||||||||| |||| ||||| |||||||||||||||| | |||||||||||||| || |||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
4587183 |
catgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaa |
4587084 |
T |
|
| Q |
125 |
acactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaac |
224 |
Q |
| |
|
|||||||||||||||||||||| ||||| || ||||||| | |||||||||||||| ||| |||||||| ||||||||| || |||||||||||||| |
|
|
| T |
4587083 |
acactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggtttaac |
4586984 |
T |
|
| Q |
225 |
accactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcct |
296 |
Q |
| |
|
||| || |||||||| ||||||| ||||||||| | |||||| | ||||||| |||||||||||||| |
|
|
| T |
4586983 |
tccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcct |
4586912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 24 - 306
Target Start/End: Complemental strand, 4603662 - 4603380
Alignment:
| Q |
24 |
acatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgtc |
123 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||| | |||||||||||||||| || ||||||||| ||| |||||||||||||||||| |
|
|
| T |
4603662 |
acatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggatttcacataacctttgtc |
4603563 |
T |
|
| Q |
124 |
aacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaa |
223 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| |||||||| || || ||| |||||||| |||||| || || |||||||| ||| |
|
|
| T |
4603562 |
aacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttgaaacaatcccagatggactaa |
4603463 |
T |
|
| Q |
224 |
caccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
306 |
Q |
| |
|
|||| | |||||||||| |||||| |||||| |||| ||| |||||||||| ||||||||||| |||||| | |||||| |
|
|
| T |
4603462 |
caccgatggaaggtgatgataatgttagtcaagatgtaccttctatttctcaatctataagaaagaatttccttaaacccttt |
4603380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 4565583 - 4565308
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
|||||||||||||| |||||| |||| |||||| ||||| ||| | ||||| ||||| ||||| ||||||||||||| ||| ||||| |||||||||| |
|
|
| T |
4565583 |
ccacatgctgtgttgattccagctccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcatataacctttg |
4565484 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||||| | || |||| |||||| ||||||||||||||| | |
|
|
| T |
4565483 |
tcaacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccataccagatggtct |
4565384 |
T |
|
| Q |
222 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
297 |
Q |
| |
|
|||||| ||||||||||||| ||||||| |||||| |||| |||||| ||||||| |||||||| || |||||| |
|
|
| T |
4565383 |
aacaccgatagaaggtgatggtgatgttagtcaagatgtaccttctcttgctcaatctataagaaaaaatttcctt |
4565308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 4612292 - 4612489
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||||||| | || | ||||||||||| ||||||||||||| ||| ||||||||||| || | |
|
|
| T |
4612292 |
ccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataacattcg |
4612391 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggt |
219 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
4612392 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggt |
4612489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 34 - 270
Target Start/End: Complemental strand, 4562204 - 4561968
Alignment:
| Q |
34 |
ttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataa-cctttgtcaacactgaa |
132 |
Q |
| |
|
|||| ||||| ||||| |||||| ||||||||| | ||||||||| ||||||| || |||||||| | ||| |||||||||| ||||||| ||||||||| |
|
|
| T |
4562204 |
ttaactccatttccagttcaaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcacataaacctttgttaacactgaa |
4562105 |
T |
|
| Q |
133 |
tacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactag |
232 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||| ||| | |
|
|
| T |
4562104 |
tacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaactccaaagg |
4562006 |
T |
|
| Q |
233 |
aaggtgatggcgatgttactcaagacataccctctctt |
270 |
Q |
| |
|
| |||||||| ||| ||| ||||||| ||| ||||||| |
|
|
| T |
4562005 |
atggtgatggtgatattagtcaagacctacactctctt |
4561968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 106 - 258
Target Start/End: Original strand, 4502951 - 4503103
Alignment:
| Q |
106 |
tttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgaga |
205 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4502951 |
tttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttacctttgaga |
4503050 |
T |
|
| Q |
206 |
ccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagac |
258 |
Q |
| |
|
||||||||||||||||||| || | ||||||||||| ||||||| ||||||| |
|
|
| T |
4503051 |
ccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagac |
4503103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 4471472 - 4471269
Alignment:
| Q |
18 |
aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacc |
117 |
Q |
| |
|
||||||||||||||| || ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
4471472 |
aaagccacatgctgtattgattccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagcttcttcaccttagaggctttcacataacg |
4471373 |
T |
|
| Q |
118 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
217 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||||| || | ||||||||||| ||| |||| |||||||||||| ||| ||| |
|
|
| T |
4471372 |
tttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactttaactttgagaccattccaaatg |
4471273 |
T |
|
| Q |
218 |
gttt |
221 |
Q |
| |
|
|||| |
|
|
| T |
4471272 |
gttt |
4471269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 39 - 290
Target Start/End: Complemental strand, 4569607 - 4569360
Alignment:
| Q |
39 |
tccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgtcaacactgaatacaat |
138 |
Q |
| |
|
|||||||||| |||||||||||||||| | || |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||| || |
|
|
| T |
4569607 |
tccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa----at |
4569512 |
T |
|
| Q |
139 |
cacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtg |
238 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| || |||||||||||||| || ||||||| |
|
|
| T |
4569511 |
cacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaaggtt |
4569412 |
T |
|
| Q |
239 |
atggcgatgttactcaagacataccctctctttctcaatcaataagaaagaa |
290 |
Q |
| |
|
|||| ||| ||| |||||| || ||||||| | | |||||||||||||| |
|
|
| T |
4569411 |
atggtgatattagtcaagaaattgtctctcttgatgattcaataagaaagaa |
4569360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 4462765 - 4462562
Alignment:
| Q |
18 |
aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacc |
117 |
Q |
| |
|
|||||||||||||||||| ||||||| |||| | ||||||||||||||| | ||||||||||||| ||| || |||||||||| |||||||||||||||| |
|
|
| T |
4462765 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggttttcacataacc |
4462666 |
T |
|
| Q |
118 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
217 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||| ||||||||| ||| | | ||||||||| ||| |||| |||||||||||| ||| ||| |
|
|
| T |
4462665 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaactttgagaccattccaaatg |
4462566 |
T |
|
| Q |
218 |
gttt |
221 |
Q |
| |
|
|||| |
|
|
| T |
4462565 |
gttt |
4462562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 4513553 - 4513755
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||||| | |||| | | ||||||| || |||||||||| ||| |||||||||||||||| |
|
|
| T |
4513553 |
ccacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttg |
4513652 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||| || || |||||||| |
|
|
| T |
4513653 |
ttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggttt |
4513752 |
T |
|
| Q |
222 |
aac |
224 |
Q |
| |
|
||| |
|
|
| T |
4513753 |
aac |
4513755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 122 - 307
Target Start/End: Original strand, 4298172 - 4298357
Alignment:
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||| ||| ||| || |||||||||||| | |||| ||||||||| || ||||||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
222 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
307 |
Q |
| |
|
|| ||| ||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttg |
4298357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 296
Target Start/End: Complemental strand, 4599663 - 4599443
Alignment:
| Q |
76 |
aaactagcaaagcttcttcaccttaaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcct |
175 |
Q |
| |
|
|||||||||||| |||||||||||| ||| ||| |||||||||| || ||||| || |||||||||||||| |||||||||||||||||| ||| | |
|
|
| T |
4599663 |
aaactagcaaagattcttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctc |
4599564 |
T |
|
| Q |
176 |
ttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctca |
275 |
Q |
| |
|
| |||||||| ||||||| |||| ||||| || |||||||||||||| ||| |||| |||||||| |||||||| || |||||| ||||| | | | |
|
|
| T |
4599563 |
gtaatggtttcactgatttttccttcgagactattccagatggtttaactccaatagatggtgatggtgatgttacacaggacataaattctctctgtaa |
4599464 |
T |
|
| Q |
276 |
atcaataagaaagaacttcct |
296 |
Q |
| |
|
|||||| ||||| |||||||| |
|
|
| T |
4599463 |
atcaatcagaaataacttcct |
4599443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 4255394 - 4255545
Alignment:
| Q |
21 |
gccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataaccttt |
120 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||||||||||| || || ||||||||||| | ||||| |||||||| |||| |
|
|
| T |
4255394 |
gccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaagg------------cttt |
4255481 |
T |
|
| Q |
121 |
gtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtt |
184 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||| |
|
|
| T |
4255482 |
gtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggtt |
4255545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 4497814 - 4497897
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcacctta |
100 |
Q |
| |
|
||||||||||||| ||||||| ||||| |||| | |||||||||||||| | ||||||||||||| ||| | |||||||||| |
|
|
| T |
4497814 |
aaaagccacatgcagtgttaactccatttccaatttaaggccatatcaatccattgttgaaactaggaaaattacttcacctta |
4497897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 4483534 - 4483568
Alignment:
| Q |
131 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
165 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggt |
4483568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 4496222 - 4496189
Alignment:
| Q |
132 |
atacaatcacaaacgtttgctcaaatcaagaggt |
165 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
4496222 |
atacaatgacaaacgtttgctcaaatcaagaggt |
4496189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 4493459 - 4493415
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaat |
66 |
Q |
| |
|
|||||||| ||||| ||||||| |||||||||||| ||||||||| |
|
|
| T |
4493459 |
ccacatgcagtgttgattccatttccagctcaaggtcatatcaat |
4493415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 148; Significance: 4e-78; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 22 - 297
Target Start/End: Complemental strand, 1282987 - 1282712
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||||| || |||||||||| ||| ||| |||||||||||| |
|
|
| T |
1282987 |
ccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggcttttacataacctttg |
1282888 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
| || |||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||| |||||||| |||||| ||||| ||||||||| | |
|
|
| T |
1282887 |
ttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaaccatcccagatggtct |
1282788 |
T |
|
| Q |
222 |
aacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttcctt |
297 |
Q |
| |
|
|||| |||||||||||||||| ||||||| |||| | |||| ||||||| |||||| ||||||||||| |||||| |
|
|
| T |
1282787 |
aacatcactagaaggtgatggtgatgttagtcaacatgtaccttctctttgtcaatctataagaaagaatttcctt |
1282712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 35776322 - 35776272
Alignment:
| Q |
100 |
aaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
150 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35776322 |
aaaggttttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35776272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 35842126 - 35842079
Alignment:
| Q |
103 |
ggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
150 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35842126 |
ggttttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35842079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 35854634 - 35854587
Alignment:
| Q |
103 |
ggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
150 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35854634 |
ggttttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35854587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 35869243 - 35869196
Alignment:
| Q |
103 |
ggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
150 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35869243 |
ggttttcacataacctttgtgaacactgaattcaaccacaaacgtttg |
35869196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 35759894 - 35759847
Alignment:
| Q |
103 |
ggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
150 |
Q |
| |
|
||||| |||||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
35759894 |
ggtttccacataacctttgtgaacactgaattcaaccacaaacgtttg |
35759847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 23 - 306
Target Start/End: Complemental strand, 1311 - 1031
Alignment:
| Q |
23 |
cacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgt |
122 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||||| ||| ||||||||| ||| | ||| |||||| ||| |
|
|
| T |
1311 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1212 |
T |
|
| Q |
123 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttta |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||||||||| || |
|
|
| T |
1211 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1112 |
T |
|
| Q |
223 |
acaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
306 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||| |||||| | |||||| |
|
|
| T |
1111 |
acaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttt |
1031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 7e-77; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 23 - 306
Target Start/End: Complemental strand, 1676074 - 1675794
Alignment:
| Q |
23 |
cacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttgt |
122 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||||| ||| ||||||||| ||| | ||| |||||| ||| |
|
|
| T |
1676074 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1675975 |
T |
|
| Q |
123 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttta |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||| |||||| ||||| ||||||||| || |
|
|
| T |
1675974 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1675875 |
T |
|
| Q |
223 |
acaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagcccttt |
306 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||| |||| ||||||| |||||| ||||||||||| |||||| | |||||| |
|
|
| T |
1675874 |
acaccactagaaggtgatggtgatgttagtcaa---ctaccttctctttgtcaatctataagaaagaatttccttaaacccttt |
1675794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 220
Target Start/End: Original strand, 20862379 - 20862582
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
|||| |||||||| ||||||| |||||||||| |||||| ||||||||| | |||| ||||||||||| || |||||||||| ||| ||| ||||||| |
|
|
| T |
20862379 |
aaaaaccacatgcagtgttaactccatatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttcaccttagaggcttttacataac |
20862478 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| || |||| ||| || |||||||||||||| ||| ||| |||||||||| | |||||| |
|
|
| T |
20862479 |
atttgtcaatactgaatacaatcacaaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgactttcgctttgagaccgttccagat |
20862578 |
T |
|
| Q |
217 |
ggtt |
220 |
Q |
| |
|
|||| |
|
|
| T |
20862579 |
ggtt |
20862582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 306
Target Start/End: Original strand, 16685029 - 16685145
Alignment:
| Q |
190 |
gattttacctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaaga |
289 |
Q |
| |
|
||||||| ||||||||| || ||| |||||||| | ||| || |||||||||||||||| ||||||||||| | |||||| | ||||||| ||||||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
290 |
acttccttcagcccttt |
306 |
Q |
| |
|
||||||| || |||||| |
|
|
| T |
16685129 |
acttcctccaacccttt |
16685145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 299
Target Start/End: Complemental strand, 2383 - 2098
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||| |||||||||||||||| | || || ||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
2383 |
aaaaaccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggctttcacataac |
2284 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||| || || ||| |
|
|
| T |
2283 |
ctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgat |
2184 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcg---atgttactcaagacataccctctctttctcaatcaataagaaagaacttccttca |
299 |
Q |
| |
|
|||||||| ||| | |||| ||||| | |||||| ||||||||||| |||||||| | ||||||| ||||| ||||||||||| |
|
|
| T |
2183 |
ggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttca |
2098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 299
Target Start/End: Original strand, 2025 - 2305
Alignment:
| Q |
22 |
ccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacctttg |
121 |
Q |
| |
|
||||||| |||| | ||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2025 |
ccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttg |
2124 |
T |
|
| Q |
122 |
tcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggttt |
221 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||| ||||||| ||| ||||| || || |||||||| |
|
|
| T |
2125 |
tcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggttt |
2224 |
T |
|
| Q |
222 |
aacaccactagaaggtgatggcg---atgttactcaagacataccctctctttctcaatcaataagaaagaacttccttca |
299 |
Q |
| |
|
||| ||| | |||| ||||| | |||||| ||||||||||| |||||||| | ||||||| ||||| ||||||||||| |
|
|
| T |
2225 |
aactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttca |
2305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 307
Target Start/End: Complemental strand, 3088304 - 3088014
Alignment:
| Q |
17 |
aaaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataac |
116 |
Q |
| |
|
||||||||||||||||||| |||||||||||| |||||| ||||| ||| | ||||| ||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
3088304 |
aaaagccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagcaaaacttcttcaccttaaaggctttcacataac |
3088205 |
T |
|
| Q |
117 |
ctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagat |
216 |
Q |
| |
|
||||||||| || |||||||||||||| |||||||| |||||||||||| ||| | ||||||||||| ||||||| ||||||||| || | |||| |
|
|
| T |
3088204 |
ctttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaagat |
3088105 |
T |
|
| Q |
217 |
ggtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
307 |
Q |
| |
|
||| |||| ||| | |||||| |||| ||||||| ||||||| | | ||||||| ||||||| | ||||||||||| |||| ||||||| |
|
|
| T |
3088104 |
ggtctaactccaatggaaggtaatggtgatgttagtcaagacttggcatctctttgtcaatcagttggaaagaacttcattcaaccctttg |
3088014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 307
Target Start/End: Complemental strand, 24104653 - 24104364
Alignment:
| Q |
18 |
aaagccacatgctgtgttaattccatatccagctcaaggccatatcaattcgttgttgaaactagcaaagcttcttcaccttaaaggttttcacataacc |
117 |
Q |
| |
|
|||||| ||||||||||| |||||| |||| |||||| ||||||||| | ||||| ||||||| ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
24104653 |
aaagccgcatgctgtgttgattccagctccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagaggctttcacataacc |
24104554 |
T |
|
| Q |
118 |
tttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatg |
217 |
Q |
| |
|
|| || ||||| ||||||||||||||||| |||||| ||||||||| | ||| | ||||||||||| |||| |||| |||||||||||||||||||| |
|
|
| T |
24104553 |
ttcgtgaacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccataccagatg |
24104454 |
T |
|
| Q |
218 |
gtttaacaccactagaaggtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctttg |
307 |
Q |
| |
|
|| |||| ||| | ||||| |||| |||||||||||||||||| | ||||| |||||||| | | |||||||||||||||||||| |
|
|
| T |
24104453 |
gtctaactccaatggaaggcaatggtgatgttactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcagccctttg |
24104364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 26903670 - 26903638
Alignment:
| Q |
115 |
acctttgtcaacactgaatacaatcacaaacgt |
147 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |
|
|
| T |
26903670 |
acctttgttaacactgaatacaatcacaaacgt |
26903638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 3310 - 3379
Alignment:
| Q |
236 |
gtgatggcgatgttactcaagacataccctctctttctcaatcaataagaaagaacttccttcagccctt |
305 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||| ||| |||||||||| |
|
|
| T |
3310 |
gtgatggtgatgttactcaagacataccctctcttgttcaatctataagaacgaatttctttcagccctt |
3379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1335 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1335
Description:
Target: scaffold1335; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 1921 - 1971
Alignment:
| Q |
100 |
aaaggttttcacataacctttgtcaacactgaatacaatcacaaacgtttg |
150 |
Q |
| |
|
|||||||| || ||||||||||| |||||||||| ||| |||||||||||| |
|
|
| T |
1921 |
aaaggtttccatataacctttgtgaacactgaattcaaccacaaacgtttg |
1971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 1349579 - 1349627
Alignment:
| Q |
110 |
acataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatc |
158 |
Q |
| |
|
||||||| |||||||||||||||| ||| |||||||| || |||||||| |
|
|
| T |
1349579 |
acataacatttgtcaacactgaattcaaccacaaacgcttactcaaatc |
1349627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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