View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11109_low_26 (Length: 253)
Name: NF11109_low_26
Description: NF11109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11109_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 38356542 - 38356786
Alignment:
| Q |
1 |
ccatgcttcttgagttgaattcgttgaaaacttggcagagaacaaaagtattaaaaattagtgtatcctttacctccttacttacattgaagattgattt |
100 |
Q |
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| T |
38356542 |
ccatgcttcttgagttgaattcgttgaaaacttggcagagaacaaaagtattaaaaattagtgtatcctttacctccttacttacattgaagattgattt |
38356641 |
T |
|
| Q |
101 |
tccataaaactgcataatcagaagaactgcaatctgatatgaagcttgagctagaaggtttctccacataatgtttgtaattagaggcgcggtacgacct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38356642 |
tccataaaactgcataatcagaagaactgcaatctgatatgaagcttgagctagaaggtttctccacataatgtttgtaattagaggcgcggtacgacct |
38356741 |
T |
|
| Q |
201 |
atcggctttttcttcattaactcctttgtaggcctctctgctgct |
245 |
Q |
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| T |
38356742 |
atcggctttttcttcattaactcctttgtaggcctttctgttgct |
38356786 |
T |
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