View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1110_low_21 (Length: 305)
Name: NF1110_low_21
Description: NF1110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1110_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 36 - 221
Target Start/End: Complemental strand, 13669614 - 13669429
Alignment:
| Q |
36 |
aacatcaatcattgatttccattgcatcatgttactttccttccaacctaattttccctccaccggtggtgaattctccgatgagtacgaggagaaactg |
135 |
Q |
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| T |
13669614 |
aacatcaatcattgatttccattgcatcatgttactttccttccaacctaattttccctccaccggtggtgaattctccgatgagtacgaggagaaactg |
13669515 |
T |
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| Q |
136 |
ctgcttccactattgtctgactctgttcctgaaacaggggcatctagtattgctcttggtgatgcttcatcgtcgcttgaaaactg |
221 |
Q |
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| T |
13669514 |
ctgcttccactattgtctgactctgttcctgaaacaggggcatctagtattgctcttggtgatgcttcatcgtcgcttgaaaactg |
13669429 |
T |
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