View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11110_high_8 (Length: 260)
Name: NF11110_high_8
Description: NF11110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11110_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 25 - 251
Target Start/End: Complemental strand, 43602310 - 43602083
Alignment:
| Q |
25 |
aatacaaacacatgctgagtgttggcatcaataataattttaaagatgaaagtaattgaatggaacccatgcatcagtgtacgacactaacacatgtcag |
124 |
Q |
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| T |
43602310 |
aatacaaacacatgctgagtgttggcatcaataataattttaaagatgaaagtaattgaatggaacccatgcatcagtgtacgacactaacacatgtcag |
43602211 |
T |
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| Q |
125 |
acattagacacatattcaatgtgaaatctccgtacatatgtatgcgcaattctctagctaaaggtaaaggcaatcaa-taacttcagcagaagaagacta |
223 |
Q |
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| T |
43602210 |
atattagacacatattcaatgtgaaatctcggtacatatgtatgcgcaattctctagctaaaggtaaaggcaatcaactaacttcagcagaagaagacta |
43602111 |
T |
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| Q |
224 |
atttctctttaattaatcagtaagaatc |
251 |
Q |
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| T |
43602110 |
atttctctttaattaatcagtaagaatc |
43602083 |
T |
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