View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11111_high_13 (Length: 238)
Name: NF11111_high_13
Description: NF11111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11111_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24462730 - 24462952
Alignment:
| Q |
1 |
agctttgactattacaaagaaacaaatctttgagtttctctgaatcagtgtcaccgggaatatatctacgatatataggagaaacttgccaccaagggta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |
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| T |
24462730 |
agctttgactattacaaagaaacaaatctttgagtttctctgaatcagtgtcaccaggaatatagctacgaaatataggagaaacttgccaccaagggta |
24462829 |
T |
|
| Q |
101 |
ttttggagaattcggaatgttatgatacaaaacaacctcgttttcgtcattagggtttacacgtgatggtagatgcttccagttgaagcacatggtggag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24462830 |
ttttggagaattcggaatgttatgatacaaaacaacctcgttttcgtcattagggtttacacgtgatggtagatgcttccagttgaagcacatggtggag |
24462929 |
T |
|
| Q |
201 |
aaagcaaaagcaccagaaggaga |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
24462930 |
aaagcaaaagcaccagaaggaga |
24462952 |
T |
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