View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11112_low_5 (Length: 256)

Name: NF11112_low_5
Description: NF11112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11112_low_5
NF11112_low_5
[»] chr5 (19 HSPs)
chr5 (1-243)||(10977083-10977325)
chr5 (132-243)||(14356199-14356310)
chr5 (63-147)||(15856653-15856738)
chr5 (55-149)||(20539252-20539347)
chr5 (58-149)||(33173865-33173958)
chr5 (63-155)||(38471409-38471503)
chr5 (63-203)||(223346-223488)
chr5 (58-160)||(1010261-1010363)
chr5 (58-160)||(8521372-8521474)
chr5 (58-128)||(30857917-30857987)
chr5 (91-155)||(14210291-14210355)
chr5 (58-155)||(32757943-32758042)
chr5 (58-239)||(22308614-22308797)
chr5 (63-124)||(2167450-2167511)
chr5 (63-124)||(5383062-5383123)
chr5 (58-135)||(9169704-9169781)
chr5 (65-102)||(9378625-9378662)
chr5 (63-124)||(40058138-40058199)
chr5 (66-130)||(22165106-22165170)
[»] chr2 (22 HSPs)
chr2 (1-243)||(9472685-9472926)
chr2 (63-243)||(15850475-15850655)
chr2 (32-127)||(1149117-1149212)
chr2 (165-243)||(28109685-28109764)
chr2 (63-155)||(35799632-35799725)
chr2 (65-243)||(34513364-34513544)
chr2 (54-125)||(42366982-42367053)
chr2 (58-155)||(2277369-2277467)
chr2 (58-155)||(28562710-28562808)
chr2 (63-155)||(8537132-8537225)
chr2 (63-147)||(26205133-26205218)
chr2 (58-155)||(34147254-34147353)
chr2 (58-125)||(18971227-18971294)
chr2 (58-140)||(7753442-7753524)
chr2 (55-124)||(14509320-14509390)
chr2 (66-147)||(29424523-29424605)
chr2 (85-153)||(1083132-1083201)
chr2 (63-124)||(10367359-10367420)
chr2 (58-127)||(21664920-21664989)
chr2 (63-124)||(25570805-25570866)
chr2 (64-124)||(12959640-12959700)
chr2 (56-128)||(17460613-17460685)
[»] chr3 (29 HSPs)
chr3 (22-224)||(5123178-5123380)
chr3 (64-199)||(53624219-53624354)
chr3 (63-144)||(43346361-43346443)
chr3 (63-147)||(21128045-21128130)
chr3 (63-175)||(45421229-45421342)
chr3 (58-177)||(20314642-20314762)
chr3 (60-147)||(48254800-48254888)
chr3 (58-178)||(20336534-20336655)
chr3 (58-155)||(21515512-21515609)
chr3 (72-147)||(21074188-21074264)
chr3 (63-153)||(3209869-3209960)
chr3 (63-152)||(48867336-48867426)
chr3 (65-153)||(35372062-35372151)
chr3 (58-149)||(10731002-10731094)
chr3 (85-153)||(52719793-52719861)
chr3 (58-129)||(46495612-46495683)
chr3 (163-225)||(25583333-25583395)
chr3 (102-147)||(47765597-47765643)
chr3 (56-129)||(7270439-7270512)
chr3 (64-148)||(12106697-12106782)
chr3 (85-153)||(41263782-41263851)
chr3 (163-243)||(50809572-50809652)
chr3 (163-243)||(50866210-50866290)
chr3 (59-124)||(53420436-53420501)
chr3 (58-135)||(55423511-55423588)
chr3 (58-145)||(18442366-18442454)
chr3 (58-145)||(19487440-19487528)
chr3 (62-138)||(35633346-35633422)
chr3 (58-153)||(40244303-40244399)
[»] chr4 (30 HSPs)
chr4 (22-243)||(668468-668689)
chr4 (58-155)||(13533162-13533259)
chr4 (63-153)||(34438526-34438616)
chr4 (63-243)||(43419191-43419371)
chr4 (63-147)||(56296313-56296398)
chr4 (58-154)||(27847795-27847891)
chr4 (58-155)||(40723345-40723443)
chr4 (58-243)||(56085465-56085650)
chr4 (73-147)||(26393038-26393113)
chr4 (73-147)||(56000417-56000492)
chr4 (58-155)||(6348272-6348370)
chr4 (63-203)||(38555130-38555272)
chr4 (73-147)||(3533519-3533594)
chr4 (59-149)||(4714139-4714230)
chr4 (58-155)||(2162727-2162825)
chr4 (69-151)||(33231519-33231601)
chr4 (99-204)||(53401336-53401442)
chr4 (75-155)||(1794548-1794629)
chr4 (59-147)||(29663758-29663847)
chr4 (101-154)||(52633598-52633651)
chr4 (32-96)||(36614185-36614249)
chr4 (101-147)||(306735-306780)
chr4 (63-144)||(17494247-17494329)
chr4 (58-155)||(37884178-37884276)
chr4 (181-243)||(54485430-54485492)
chr4 (85-153)||(2311098-2311167)
chr4 (63-124)||(11114915-11114976)
chr4 (58-135)||(28657039-28657116)
chr4 (99-151)||(50547066-50547118)
chr4 (163-243)||(54484464-54484544)
[»] chr6 (16 HSPs)
chr6 (32-127)||(136719-136814)
chr6 (58-155)||(7312184-7312281)
chr6 (38-127)||(30231576-30231665)
chr6 (58-149)||(24757000-24757092)
chr6 (56-153)||(29380306-29380404)
chr6 (58-155)||(32505786-32505884)
chr6 (56-153)||(23397257-23397355)
chr6 (63-124)||(293575-293636)
chr6 (63-124)||(14328709-14328770)
chr6 (63-124)||(14421719-14421780)
chr6 (55-140)||(9927716-9927802)
chr6 (63-149)||(27082081-27082168)
chr6 (163-243)||(232325-232405)
chr6 (58-127)||(15728848-15728917)
chr6 (184-243)||(18558656-18558716)
chr6 (63-155)||(22298724-22298816)
[»] chr7 (12 HSPs)
chr7 (58-155)||(9662138-9662235)
chr7 (32-127)||(26135733-26135828)
chr7 (63-243)||(26406245-26406425)
chr7 (63-243)||(35484126-35484306)
chr7 (59-124)||(7354623-7354688)
chr7 (63-154)||(28325192-28325284)
chr7 (58-147)||(16755989-16756079)
chr7 (58-153)||(11501297-11501393)
chr7 (73-147)||(45719745-45719820)
chr7 (63-148)||(25154846-25154932)
chr7 (32-148)||(3332064-3332181)
chr7 (63-124)||(46458648-46458709)
[»] chr8 (26 HSPs)
chr8 (58-153)||(32693947-32694043)
chr8 (73-147)||(24069357-24069432)
chr8 (63-147)||(13513540-13513625)
chr8 (63-147)||(13603073-13603158)
chr8 (63-147)||(34617106-34617191)
chr8 (73-147)||(7770809-7770884)
chr8 (73-147)||(7796719-7796794)
chr8 (73-147)||(7816000-7816075)
chr8 (73-147)||(39515329-39515404)
chr8 (85-217)||(44076200-44076332)
chr8 (58-153)||(42100009-42100105)
chr8 (64-155)||(38696908-38696999)
chr8 (58-160)||(42877736-42877838)
chr8 (63-124)||(13366985-13367046)
chr8 (63-128)||(39220799-39220864)
chr8 (63-155)||(44606259-44606352)
chr8 (100-155)||(6397942-6397998)
chr8 (58-129)||(42872117-42872188)
chr8 (85-144)||(45395112-45395171)
chr8 (56-153)||(32797256-32797354)
chr8 (131-225)||(36938869-36938963)
chr8 (59-147)||(14840807-14840896)
chr8 (87-147)||(38696455-38696516)
chr8 (73-153)||(45279812-45279893)
chr8 (32-92)||(28403543-28403603)
chr8 (68-124)||(36070303-36070359)
[»] chr1 (24 HSPs)
chr1 (63-155)||(19466109-19466201)
chr1 (64-155)||(51300160-51300252)
chr1 (63-154)||(36509931-36510022)
chr1 (58-124)||(16757456-16757522)
chr1 (58-155)||(48096932-48097030)
chr1 (58-160)||(15746662-15746764)
chr1 (73-153)||(16963966-16964047)
chr1 (71-155)||(30535570-30535654)
chr1 (64-128)||(38965195-38965259)
chr1 (58-149)||(41873877-41873969)
chr1 (59-140)||(34258627-34258709)
chr1 (85-149)||(7161229-7161294)
chr1 (119-244)||(15743416-15743540)
chr1 (58-243)||(46467264-46467449)
chr1 (62-123)||(47762015-47762076)
chr1 (56-155)||(51042240-51042343)
chr1 (63-124)||(51726779-51726840)
chr1 (55-155)||(835390-835489)
chr1 (57-243)||(9226027-9226214)
chr1 (72-155)||(21507197-21507280)
chr1 (63-147)||(9633895-9633980)
chr1 (63-124)||(21277114-21277175)
chr1 (64-124)||(8092719-8092779)
chr1 (63-155)||(13642461-13642553)
[»] scaffold2071 (1 HSPs)
scaffold2071 (64-155)||(581-673)
[»] scaffold0178 (1 HSPs)
scaffold0178 (63-155)||(1331-1422)
[»] scaffold0148 (1 HSPs)
scaffold0148 (59-155)||(14820-14916)
[»] scaffold0034 (1 HSPs)
scaffold0034 (59-153)||(109648-109743)
[»] scaffold0031 (1 HSPs)
scaffold0031 (75-148)||(125137-125212)
[»] scaffold0018 (2 HSPs)
scaffold0018 (58-149)||(151966-152058)
scaffold0018 (57-153)||(151452-151549)
[»] scaffold0128 (1 HSPs)
scaffold0128 (85-155)||(22125-22196)
[»] scaffold0122 (1 HSPs)
scaffold0122 (63-124)||(16065-16126)
[»] scaffold0201 (1 HSPs)
scaffold0201 (58-149)||(21245-21337)
[»] scaffold0077 (1 HSPs)
scaffold0077 (58-153)||(52709-52805)


Alignment Details
Target: chr5 (Bit Score: 163; Significance: 4e-87; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 10977083 - 10977325
Alignment:
Q  1 aaaacccacgtttcgatctttcaattatacatccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataa 100  Q
    ||||||||||||||| ||  |||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||     
T  10977083 aaaacccacgtttcggtccctcaattttacgtccgtcagtcaaattggtcatgttccgttaattttaacttcaaatgtctaagatggaccaacattgtat 10977182  T
Q  101 gtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgcaaacaagaaccgttggatcacagatgtctattgtatcgtacgg 200  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||||| | |||||||||||||| ||||     
T  10977183 gtggtctaccatagaccatattaattttttaattttatccatttgatctatttttgaaaacaggaaccgttggatcatatatgtctattgtatcatacga 10977282  T
Q  201 tgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  10977283 tgaaccatcaacaactaattattttcccctttattcatcttct 10977325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 14356310 - 14356199
Alignment:
Q  132 attttaaccatttgatctatttttgcaaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcctt 231  Q
    ||||||||||||||||||||||||  ||||||| | ||||| |||||| | |||||||||||  || |||||| ||||||||||| ||||||||||||||    
T  14356310 attttaaccatttgatctatttttcaaaacaaggatcgttgtatcacaaaagtctattgtattatatggtgaatcatcaacaacttattattttctcctt 14356211  T
Q  232 tcttcatcttct 243  Q
    |||| |||||||    
T  14356210 tctttatcttct 14356199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 15856653 - 15856738
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    ||||||||  |||||| |||| ||||||||||||||| |||||| ||||||||||||| ||| ||||| |||||||| ||||||||    
T  15856653 ttttaaccctaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaatcatttgat 15856738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 20539347 - 20539252
Alignment:
Q  55 tccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat-ttttaaattttaaccatttgatct 149  Q
    |||||||| ||||||  ||||| |||||| |||||||| ||| || |||||||| |||||||||||||||| |||| ||||| |||| ||||||||    
T  20539347 tccgttaagtttaacaccaaatatataaggtggaccaatattgtaggtggtctatcatagaccttattaatttttttaatttaaaccgtttgatct 20539252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 33173958 - 33173865
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa--tttttaaattttaaccatttgatct 149  Q
    ||||| ||||||| ||||||| || | ||||||||| |||  ||||||||||||||||| | |||||  |||||||||||||||| ||||||||    
T  33173958 gttaagtttaaccccaaatgtctatggtggaccaaccttaagagtggtctaccatagacttcattaatttttttaaattttaaccgtttgatct 33173865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 38471409 - 38471503
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat--ttttaaattttaaccatttgatctattttt 155  Q
    ||||||||| |||||| |||| || |||||| ||||| |||||||||||||||| |||||| |  ||||  ||||||||| |||||||| |||||    
T  38471409 ttttaaccttaaatgtttaaggtgaaccaactttataggtggtctaccatagactttattatttattttttattttaaccgtttgatcttttttt 38471503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 203
Target Start/End: Original strand, 223346 - 223488
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctatttt-tgcaaa 160  Q
    |||||| || |||||| |||| || |||||| || || |||||||||||||||| ||||| ||||||| ||||| |||| |||||||| |||| |  |||    
T  223346 ttttaatcttaaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgatcttttttatttaaa 223445  T
Q  161 caagaaccgttggatcacagatgtctattgtatcgtacggtga 203  Q
      |||||| |||||| ||  ||||||||| |||| ||||||||    
T  223446 gtagaacctttggattactcatgtctattttatcttacggtga 223488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 1010363 - 1010261
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgc 157  Q
    ||||| ||||||| ||||||| || | ||||||||| |||  |||||||  ||||||| | |||||||| || ||||| |||| |||||||||||||| |    
T  1010363 gttaactttaaccccaaatgtgtatggtggaccaaccttaagagtggtccgccatagatcctattaattatttaatttcaaccctttgatctatttttcc 1010264  T
Q  158 aaa 160  Q
    |||    
T  1010263 aaa 1010261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 8521372 - 8521474
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgc 157  Q
    ||||| ||||||| ||||||| || | ||||||||| |||  | ||||| |||||||| | |||||||| || ||||| |||| |||||||||||||| |    
T  8521372 gttaactttaaccccaaatgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaattatttaatttcaaccctttgatctattttttc 8521471  T
Q  158 aaa 160  Q
    |||    
T  8521472 aaa 8521474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 30857917 - 30857987
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt 128  Q
    ||||| |||||| | |||||| || ||||||||||| ||| |||||||||| || ||||||||||||||||    
T  30857917 gttaactttaactttaaatgtctatgatggaccaaccttaaaagtggtctatcagagaccttattaatttt 30857987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 14210291 - 14210355
Alignment:
Q  91 aacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    |||||||||||||||| | ||||||||| ||||| ||||  ||||||||| |||||||| |||||    
T  14210291 aacattataagtggtccatcatagacctcattaaattttttattttaaccttttgatcttttttt 14210355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 32757943 - 32758042
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa--tttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||||| ||||||| || | |||||||||||  ||  | ||| |||||||||||||||||  ||||| |||||||||| |||||||| |||||    
T  32757943 gttaactttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaatttttttcaattttaaccctttgatcttttttt 32758042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 22308797 - 22308614
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgatctatttttg 156  Q
    ||||| ||||||| ||||||| || | |||||| || |||  ||||||| ||||||||| ||||||| ||||| ||| | ||||||||||||| |||||     
T  22308797 gttaagtttaaccccaaatgtctatggtggacctaccttaagagtggtccaccatagacattattaaattttttaatgtaaaccatttgatctgtttttt 22308698  T
Q  157 caaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttc-tcctttcttcatc 239  Q
     |||  |  ||| |||||| |   |||||||||||  | ||||||| |||| ||||| |||||| ||||| | |||||||||||    
T  22308697 aaaaagatgaccattggattatgcatgtctattgttacttacggtgtaccaacaacacctaatttttttctttctttcttcatc 22308614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 2167511 - 2167450
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| |||||  ||||| |||||||||||||||||    
T  2167511 ttttaaccttaaatgtctaaggtgaaccaactttatagatggtccaccatagaccttattaa 2167450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 5383062 - 5383123
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || | |||| ||||| |||||| |||||||||||||||||    
T  5383062 ttttaaccttaaatgtctaaggtgaatcaactttataggtggtccaccatagaccttattaa 5383123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 9169704 - 9169781
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattt 135  Q
    ||||| ||||||| ||||||| ||   |||||||| ||||||  ||||| | |||||||| |||||||||||||||||    
T  9169704 gttaactttaaccccaaatgtctatagtggaccaatattatagatggtccatcatagaccgtattaatttttaaattt 9169781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 9378662 - 9378625
Alignment:
Q  65 ttaacctcaaatgtataagatggaccaacattataagt 102  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  9378662 ttaacctcaaatgtctaaggtggaccaacattataagt 9378625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 40058138 - 40058199
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||||| || |||||| |||| || |||||| |||||||| ||| |||||||||||||||||    
T  40058138 ttttaatcttaaatgtctaaggtgaaccaactttataagtagtccaccatagaccttattaa 40058199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 22165106 - 22165170
Alignment:
Q  66 taacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattttta 130  Q
    ||||||||||||| |  | ||||||||||||||| |||||| |||| |||| | |||||||||||    
T  22165106 taacctcaaatgtctttggtggaccaacattataggtggtccaccaaagacgtcattaattttta 22165170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 9472685 - 9472926
Alignment:
Q  1 aaaacccacgtttcgatctttcaattatacatccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataa 100  Q
    ||||||||||||||| ||  |||||||||| | ||||||||||||||||| ||||||||||||||||||  ||||| | ||||||||||||||||| ||     
T  9472685 aaaacccacgtttcggtccctcaattatacgttcgtcagtcaaattggtcctgttccgttaattttaactccaaatatctaagatggaccaacattgtat 9472784  T
Q  101 gtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgcaaacaagaaccgttggatcacagatgtctattgtatcgtacgg 200  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||||| ||||| || ||||| | |||||||||||||| ||||     
T  9472785 gtggtctaccatagaccatattaattttttaattttatccatttgatctatttttgaaaacaggaaccatttgatcatatatgtctattgtatc-tacga 9472883  T
Q  201 tgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  9472884 tgaaccatcaacaactaattattttcccctttcttcatcttct 9472926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 15850655 - 15850475
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatt-tttgcaaac 161  Q
    ||||||||  |||||| |||| || |||||||||||| |||||| |||||||| |||| ||  |||| |||||||||| |||||||| || |||  |||     
T  15850655 ttttaaccctaaatgtctaaggtgaaccaacattataggtggtccaccatagatcttaatagatttttaattttaaccctttgatcttttgtttataaat 15850556  T
Q  162 aagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
     ||||| ||| ||||| | ||||||||||||| |||  |||||||  ||||||| |||| ||||| | ||||||||||||||    
T  15850555 gagaacagttagatcatacatgtctattgtattgtatagtgaaccgccaacaaccaatt-ttttcccatttcttcatcttct 15850475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 1149212 - 1149117
Alignment:
Q  32 tccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt 127  Q
    ||||| ||||||||| ||| | |||||||||||||||| |||||| | ||| ||||||| ||||  ||| ||||| ||||||||||||||||||||    
T  1149212 tccgttagtcaaattagtcttattccgttaattttaacatcaaatatctaatatggaccgacatggtaaatggtccaccatagaccttattaattt 1149117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 28109764 - 28109685
Alignment:
Q  165 aaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcc-tttcttcatcttct 243  Q
    ||||||||||||| | |||||| ||||||| |||||||||| ||||||| |||||| |||||||| ||||||||||||||    
T  28109764 aaccgttggatcatatatgtctgttgtatcatacggtgaacaatcaacacctaatttttttctccatttcttcatcttct 28109685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 35799632 - 35799725
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattttta-aattttaaccatttgatctattttt 155  Q
    ||||||||| |||||| |||| || | |||| |||||||||||||||||||||| ||||||| | ||| |||||||||| |||||||| |||||    
T  35799632 ttttaaccttaaatgtctaaggtgaatcaactttataagtggtctaccatagactttattaaatgttataattttaaccgtttgatcttttttt 35799725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 34513544 - 34513364
Alignment:
Q  65 ttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat-ttttaaattttaaccatttgatctatttttgcaaacaa 163  Q
    |||||| |||||||||| | | ||||||| |||  |||| || |||||||||||||||||| |||| ||||| |||| |||||||| |||||  |||  |    
T  34513544 ttaaccccaaatgtatatggttgaccaaccttaagagtgatccaccatagaccttattaatttttttaatttaaaccgtttgatctgttttttaaaaaga 34513445  T
Q  164 gaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttc-tcctttcttcatcttct 243  Q
      | | |||||| |    ||||||||||| | ||||||| |||| |||||||||||| ||||| | |||||||||||||||    
T  34513444 tgatcattggattatgcgtgtctattgtaacttacggtgtaccaacaacaactaatttttttctttctttcttcatcttct 34513364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 42366982 - 42367053
Alignment:
Q  54 ttccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat 125  Q
    ||||||||||| ||||| | ||||| |||||||||||| ||||  | ||||||||| |||||||||||||||    
T  42366982 ttccgttaattctaacccctaatgtgtaagatggaccatcattgaaggtggtctacgatagaccttattaat 42367053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 2277467 - 2277369
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat-ttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||||| ||||||| || | |||||||||||  ||  | ||| |||||||||||||||||| |||| |||||||||| |||||||| |||||    
T  2277467 gttaactttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaattttttcaattttaaccctttgatcttttttt 2277369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 28562808 - 28562710
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||| | ||||| |||| | |||||||||||||||  | ||| ||||||||||||||| ||||||  |||||||||| |||||||| |||||    
T  28562808 gttaagtttaatcccaaatatatatggtggaccaacattatagatagtccaccatagaccttattaaattttccaattttaaccctttgatcttttttt 28562710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 8537132 - 8537225
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt-ttaaattttaaccatttgatctattttt 155  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||  ||||||||| |||||||    || ||||||||||||||||||| |||||    
T  8537132 ttttaaccttaaatgtctaagatgtaccaactttttaagtggttcaccatagactttattaaaaaatttaattttaaccatttgatcttttttt 8537225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 26205133 - 26205218
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    ||||||| |||||||| |||| || ||||   ||| |||||||| ||||||  ||||||||| |||||||||||||||||||||||    
T  26205133 ttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgccttattaattttttaaattttaaccatttgat 26205218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 34147254 - 34147353
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa--tttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||||| ||||||| || | |||||||||||  ||  | ||| |||||||||||||||||  ||||| |||||||||| |||||||| |||||    
T  34147254 gttaactttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaatttttttcaattttaaccctttgatcttttttt 34147353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 18971294 - 18971227
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat 125  Q
    |||||||||||||  |||| |||||| |||||||||||| ||  ||||||||  ||||||||||||||    
T  18971294 gttaattttaacccaaaatatataaggtggaccaacattgtagatggtctactgtagaccttattaat 18971227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 7753524 - 7753442
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaacc 140  Q
    ||||| ||||||  |||||||||| | |||| ||||||| || ||| || |||||||||| ||||||||||| ||||| ||||    
T  7753524 gttaactttaactccaaatgtatatggtggatcaacattgtaggtgatccaccatagaccgtattaattttttaatttaaacc 7753442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 14509320 - 14509390
Alignment:
Q  55 tccgttaatttt-aacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||||||||||| ||||| |||||| |||| |  |||||| ||||| |||||| |||||||||||||||||    
T  14509320 tccgttaatttttaaccttaaatgtctaaggtaaaccaactttataggtggtccaccatagaccttattaa 14509390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 29424605 - 29424523
Alignment:
Q  66 taacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||| |||||||| ||||||| ||||   ||| | |||||| | ||||||||||||||| |||||||||||||||| ||||||    
T  29424605 taacatcaaatgtctaagatgaaccatgtttaaaggtggtccatcatagaccttattaaatttttaaattttaaccttttgat 29424523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 1083132 - 1083201
Alignment:
Q  85 tggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    |||| |||| ||| ||||||||||   ||||||||||||||||| | ||||||||||||| |||||||||    
T  1083132 tggatcaaccttaaaagtggtctattgtagaccttattaattttgttaattttaaccattcgatctattt 1083201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 10367359 - 10367420
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| ||||| |||||| || ||||||||||||||    
T  10367359 ttttaaccttaaatgtctaaggtgaaccaactttataggtggtccacaatagaccttattaa 10367420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 21664920 - 21664989
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt 127  Q
    ||||| |||||| |||||||| || | |||||||||||| || |||||| | |||||||||| |||||||    
T  21664920 gttaagtttaacttcaaatgtctatggtggaccaacattgtaggtggtcaatcatagaccttgttaattt 21664989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 25570866 - 25570805
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||||| || |||||| |||| || |||||| ||||| |||||| |||||||||||||||||    
T  25570866 ttttaaacttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 25570805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 12959700 - 12959640
Alignment:
Q  64 tttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||||||| |||||| |||| || |||||| ||||| |||||| || ||||||||||||||    
T  12959700 tttaaccttaaatgtctaaggtgaaccaactttataggtggtccacaatagaccttattaa 12959640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 17460685 - 17460613
Alignment:
Q  56 ccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt 128  Q
    ||||||| |||||| | |||||| || | ||||||||  ||| |||||||||| | |||||||||||||||||    
T  17460685 ccgttaactttaactttaaatgtctatggtggaccaatcttaaaagtggtctatcgtagaccttattaatttt 17460613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 5e-68; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 224
Target Start/End: Complemental strand, 5123380 - 5123178
Alignment:
Q  22 caattatacatccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttat 121  Q
    ||||||||| | ||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||    
T  5123380 caattatacgttcgttagttaaattggtcatgttctgttaattttaacctcaaatgtttaagatggaccaacattgtatgtggtctaccatagaccttat 5123281  T
Q  122 taatttttaaattttaaccatttgatctatttttgcaaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaatta 221  Q
    |||||||| |||||||||||||||||||||||||  | ||| ||||||||||||| |||| |||||||||||| | | ||||||||||||||||||||||    
T  5123280 taattttttaattttaaccatttgatctattttttaacacatgaaccgttggatcgcagaggtctattgtatcattcagtgaaccatcaacaactaatta 5123181  T
Q  222 ttt 224  Q
    |||    
T  5123180 ttt 5123178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 199
Target Start/End: Complemental strand, 53624354 - 53624219
Alignment:
Q  64 tttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgcaaacaa 163  Q
    ||||||| |||||||||| | |||||||||||||||  | ||| |||||||||||||||||||||| |||||||||| |||||||| |||||   ||  |    
T  53624354 tttaaccccaaatgtatatggtggaccaacattatagatagtccaccatagaccttattaatttttcaattttaaccttttgatctttttttaagaaaga 53624255  T
Q  164 gaaccgttggatcacagatgtctattgtatcgtacg 199  Q
    |||||||||||| |||  |||||||| |||| ||||    
T  53624254 gaaccgttggattacacgtgtctattttatcttacg 53624219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 43346443 - 43346361
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagacctta-ttaatttttaaattttaaccattt 144  Q
    ||||||||  |||||| |||| ||||||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||    
T  43346443 ttttaaccctaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaaattttttaattttaaccattt 43346361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 21128045 - 21128130
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    ||||||||  |||||| |||| ||||||||||||||| |||||| |||||||||||||  || ||||| |||||||||||||||||    
T  21128045 ttttaaccctaaatgtctaaggtggaccaacattataggtggtccaccatagaccttacaaagttttttaattttaaccatttgat 21128130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 45421229 - 45421342
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat-ttttaaattttaaccatttgatctatttttgcaaac 161  Q
    ||||||||  |||||| ||||||| |||||||||| | |||||| |||||||||||||| ||| |||| ||||| ||||| ||||||| |||||| ||      
T  45421229 ttttaaccataaatgtctaagatgaaccaacattagaggtggtccaccatagaccttataaatgttttcaatttaaaccacttgatctttttttgaaata 45421328  T
Q  162 aagaaccgttggat 175  Q
     |||||||||||||    
T  45421329 gagaaccgttggat 45421342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 20314762 - 20314642
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt-ttaaattttaaccatttgatctatttttg 156  Q
    ||||| ||||||  ||||||| || | | |||||||||||||  | ||| |||||||||||||||||||| || ||||| ||||||||||| |||||||     
T  20314762 gttaagtttaactccaaatgtctatgttagaccaacattatagatagtccaccatagaccttattaatttatttaatttaaaccatttgatttatttttt 20314663  T
Q  157 caaacaagaaccgttggatca 177  Q
    ||||  || ||||||||||||    
T  20314662 caaaagaggaccgttggatca 20314642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 48254888 - 48254800
Alignment:
Q  60 taattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||||||| | |||||| |||| ||||||||||||||| |||||| |||||| |||||| ||| ||||| ||||||||||| |||||    
T  48254888 taattttaacattaaatgtctaaggtggaccaacattataggtggtccaccataaaccttactaagttttttaattttaaccacttgat 48254800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 20336655 - 20336534
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt-ttaaattttaaccatttgatctatttttg 156  Q
    ||||| ||||||  ||||||| || | |||||||||||||||  | ||| |||||||||||||||||||| || ||||| |||||||  || |||||||     
T  20336655 gttaagtttaactccaaatgtctatgttggaccaacattatagatagtccaccatagaccttattaatttatttaatttaaaccattcaatttatttttt 20336556  T
Q  157 caaacaagaaccgttggatcac 178  Q
     |||  ||||||||||||||||    
T  20336555 taaaagagaaccgttggatcac 20336534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 21515609 - 21515512
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||||  ||||||||| || |||| ||| ||| || |||||| |||||| ||||||||||||||| ||||  | |||||||||||||||||    
T  21515609 gttaactttaactccaaatgtattaggtggatcaatattgtaggtggtccaccatataccttattaattttttaattccagccatttgatctattttt 21515512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 21074264 - 21074188
Alignment:
Q  72 caaatgtataagatggaccaacattataagtggtctaccatagaccttattaat-ttttaaattttaaccatttgat 147  Q
    |||||||||| | |||||||||||||||  | ||| |||||||||||||||||| |||| |||||||||| ||||||    
T  21074264 caaatgtatatggtggaccaacattatagatagtccaccatagaccttattaattttttcaattttaaccctttgat 21074188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 3209960 - 3209869
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||||| ||||||||||| | ||||||||| ||| || | ||| | | || |||||||||||||| | |||||||||||||||||||||||    
T  3209960 ttttaacttcaaatgtatatggtggaccaaccttaaaaatagtccatcgtaaaccttattaattttgttaattttaaccatttgatctattt 3209869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 48867426 - 48867336
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctatt 152  Q
    ||||||||| |||||| |||| || |||||| || || |||||||||||||||| ||||| || |||  |||||||||||||| |||||||    
T  48867426 ttttaaccttaaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaaatttgtaattttaaccattttatctatt 48867336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 35372151 - 35372062
Alignment:
Q  65 ttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||| |||||||| || | ||||||||  ||| |||||||| | | ||||||||||||||||| | ||||||||||||| |||||||||    
T  35372151 ttaacttcaaatgtctatgttggaccaattttaaaagtggtccatcgtagaccttattaattttgttaattttaaccattcgatctattt 35372062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 10731002 - 10731094
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatct 149  Q
    ||||| |||||| |||||||| || | || |||||| ||| |||||||||| |||| |||||||||||||| | |||||||| |||| |||||    
T  10731002 gttaactttaacttcaaatgtctatggtgaaccaaccttaaaagtggtctatcatataccttattaattttgttaattttaatcattcgatct 10731094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 52719861 - 52719793
Alignment:
Q  85 tggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattt 153  Q
    ||||||||||||||| |||||| |||||| |||| ||||  |||| ||| ||||||||||||| |||||    
T  52719861 tggaccaacattatatgtggtccaccataaacctcattagctttttaatcttaaccatttgatatattt 52719793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 46495612 - 46495683
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattttt 129  Q
    ||||| ||||| | ||||||||| || || ||||||||| || |||||| | ||||||||||||||||||||    
T  46495612 gttaactttaaacccaaatgtattaggtgaaccaacattgtaggtggtccatcatagaccttattaattttt 46495683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 25583333 - 25583395
Alignment:
Q  163 agaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattatttt 225  Q
    ||||||||||||| | | | |||| ||||| | |||||||||||||||||| |||||||||||    
T  25583333 agaaccgttggattatataggtctgttgtaccttacggtgaaccatcaacacctaattatttt 25583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 47765597 - 47765643
Alignment:
Q  102 tggtctaccatagaccttatt-aatttttaaattttaaccatttgat 147  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||    
T  47765597 tggtccaccatagaccttattgaatttttaaattttaaccttttgat 47765643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 7270439 - 7270512
Alignment:
Q  56 ccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattttt 129  Q
    ||||||| ||||||||||||||| |    ||||||||| |||  |||||||||||||||| |||||||| ||||    
T  7270439 ccgttaactttaacctcaaatgtctgtagtggaccaaccttaagagtggtctaccatagatcttattaactttt 7270512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 12106697 - 12106782
Alignment:
Q  64 tttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt-ttaaattttaaccatttgatc 148  Q
    |||||||| |||||| ||  ||||||||  ||||||| ||||| ||| |||||||||||||||| || ||||||| || |||||||    
T  12106697 tttaaccttaaatgtctattatggaccagtattataaatggtccaccgtagaccttattaatttattcaattttatccctttgatc 12106782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 41263782 - 41263851
Alignment:
Q  85 tggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    |||| |||| ||| ||||||||||   ||||||||||||||||| | ||||||||||||| |||||||||    
T  41263782 tggatcaaccttaaaagtggtctattctagaccttattaattttgttaattttaaccattcgatctattt 41263851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 50809572 - 50809652
Alignment:
Q  163 agaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaatta-ttttctcctttcttcatcttct 243  Q
    |||||| |||||| ||  ||||||||| |||| ||||||||| || ||||| ||||||| ||||||| ||||||||||||||    
T  50809572 agaaccattggattacgcatgtctattttatcttacggtgaatcaacaacatctaattaattttctc-tttcttcatcttct 50809652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 50866290 - 50866210
Alignment:
Q  163 agaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaatta-ttttctcctttcttcatcttct 243  Q
    |||||| |||||| ||  ||||||||| |||| ||||||||| || ||||| ||||||| ||||||| ||||||||||||||    
T  50866290 agaaccattggattacgcatgtctattttatcttacggtgaatcaacaacatctaattaattttctc-tttcttcatcttct 50866210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 53420436 - 53420501
Alignment:
Q  59 ttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||| ||||||| ||||||| || | ||||||||| ||| ||||| || |||||||||||||||||    
T  53420436 ttaagtttaaccacaaatgtctatggtggaccaactttaaaagtgatccaccatagaccttattaa 53420501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 55423511 - 55423588
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattt 135  Q
    ||||| || |||| ||||||| | || ||||||||| || || |||||| ||| |||||||||||||||||| |||||    
T  55423511 gttaacttcaaccccaaatgtcttaggtggaccaaccttgtaggtggtccaccgtagaccttattaattttttaattt 55423588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 18442366 - 18442454
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttg 145  Q
    ||||| ||||||| ||||||| || | ||||||||||||||   | ||| ||||||||||||||||| || || |||||||||| ||||    
T  18442366 gttaagtttaaccccaaatgtctatggtggaccaacattatcgatagtccaccatagaccttattaacttcttcaattttaaccctttg 18442454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 19487440 - 19487528
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttg 145  Q
    ||||| ||||||| ||||||| || | ||||||||||||||   | ||| ||||||||||||||||| || || |||||||||| ||||    
T  19487440 gttaagtttaaccccaaatgtctatggtggaccaacattatcgatagtccaccatagaccttattaacttcttcaattttaaccctttg 19487528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 35633346 - 35633422
Alignment:
Q  62 attttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaa 138  Q
    |||||||||  |||||| |||| || | |||||||  | ||||||||||||||||||  | ||||||||||||||||    
T  35633346 attttaaccataaatgtctaaggtgtaacaacattgcaggtggtctaccatagacctattaaatttttaaattttaa 35633422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 40244303 - 40244399
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||| |||||| |||| ||| || | ||||||||  ||| |||||||| | | ||||||||||||||||| | |||||||||  ||||||||||||    
T  40244303 gttaactttaacttcaagtgtctatggtggaccaaacttaaaagtggtccatcgtagaccttattaattttgttaattttaactctttgatctattt 40244399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 243
Target Start/End: Original strand, 668468 - 668689
Alignment:
Q  22 caattatacatccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttat 121  Q
    ||||| ||| ||||||| |||||||||||   ||||||||||||||||| ||||| | ||||||||| ||||||| ||  ||||||| ||||||||||||    
T  668468 caattttacgtccgtcattcaaattggtcccattccgttaattttaaccccaaatatttaagatggaacaacattgtagatggtctatcatagaccttat 668567  T
Q  122 taatttttaaattttaaccatttgatctatttttgcaaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaatta 221  Q
    |||||||| || |||||||||| |||||||||||  |||||| || |||||||||| | | |||||||||||| |||  |||||||||||||||||||||    
T  668568 taattttttaaatttaaccattagatctatttttcaaaacaaaaaacgttggatcaaaaaggtctattgtatcatacaatgaaccatcaacaactaatta 668667  T
Q  222 ttttctcctttcttcatcttct 243  Q
    ||||  ||||||||||||||||    
T  668668 tttttccctttcttcatcttct 668689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 13533259 - 13533162
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||| |||||| |||||||| || | |||||||||||||||  | ||| |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  13533259 gttaaatttaacttcaaatgtctatggtggaccaacattatagatagtccaccatagaccttattaatttttcaattttaaccatttgatcttttttt 13533162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 153
Target Start/End: Original strand, 34438526 - 34438616
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattt 153  Q
    |||||||||||||||| || | ||||| |||||||||  | ||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  34438526 ttttaacctcaaatgtctatggtggactaacattatagatagtccaccatagaccttattaattttttaatttcaaccatttgatctattt 34438616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 43419371 - 43419191
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatt-tttgcaaac 161  Q
    ||||||||  ||||||||||| || |||||||||||| |||||| |||||||| |||| ||  |||| |||||||||| |||||||| || | |   ||     
T  43419371 ttttaaccataaatgtataaggtgaaccaacattataggtggtccaccatagatcttaatagatttttaattttaaccctttgatcttttgtctattaat 43419272  T
Q  162 aagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
     ||||| ||| ||||| | |||||||||||||||||  |||||||  ||||||| |||| ||||| ||||||||||||||||    
T  43419271 gagaacggttagatcatacatgtctattgtatcgtatagtgaaccgccaacaaccaatt-ttttcccctttcttcatcttct 43419191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 56296313 - 56296398
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    ||||||||  |||||| |||| ||||||||||| ||| |||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  56296313 ttttaaccctaaatgtctaaggtggaccaacatcataggtggtctaccatagaccttactaagttttttaattttaaccatttgat 56296398  T

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Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 27847795 - 27847891
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttt 154  Q
    ||||| ||||||| |||||||||| | ||| |||| ||||||  | ||| |||||||||||||||||||||| |||||||||| |||||||| ||||    
T  27847795 gttaagtttaaccccaaatgtatatggtgggccaagattatagatagtccaccatagaccttattaatttttcaattttaaccctttgatctttttt 27847891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 40723345 - 40723443
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatt-tttaaattttaaccatttgatctattttt 155  Q
    ||||| |||||||||||||||||| | ||||||||| |||  |||||||||||||||| | |||||||| ||||||| |||| | |||||||| |||||    
T  40723345 gttaagtttaacctcaaatgtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatgttaatcgtttgatcttttttt 40723443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 56085465 - 56085650
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatt-tttaaattttaaccatttgatctatttttg 156  Q
    ||||| ||||||| ||||||| || | ||||| ||| |||  ||||||| |||||||| | |||||||| ||| ||||| |||| |||||| | |||||     
T  56085465 gttaactttaaccccaaatgtctatggtggactaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgattttttttta 56085564  T
Q  157 caaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
     ||  | || ||||||||||||| |||| |||| |||| ||| ||||||||||||||  ||||| |||  |||||||||||||||||    
T  56085565 aaaggatga-ccgttggatcacacatgtgtattttatcttacagtgaaccatcaacacttaattctttattcctttcttcatcttct 56085650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 26393113 - 26393038
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||| |||| || |||||||||||| |||||| ||||||||||||| ||| ||||| |||||||||||||||||    
T  26393113 aaatgtctaaggtgaaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgat 26393038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 56000417 - 56000492
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||| |||| ||||||||||||||| |||||| ||| ||||||||| ||| ||||| |||||||||||||||||    
T  56000417 aaatgtctaaggtggaccaacattataggtggtccaccgtagaccttactaagttttttaattttaaccatttgat 56000492  T

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Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 6348272 - 6348370
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat-ttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||||||||||||| || | ||||||||| |||  ||||||| ||| |||||||||||||| |||  |||||||||| |||||||| |||||    
T  6348272 gttaagtttaacctcaaatgtctatggtggaccaaccttaagagtggtccaccgtagaccttattaatatttctaattttaaccctttgatcttttttt 6348370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 38555272 - 38555130
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctatttt-tgcaaa 160  Q
    |||||| || |||||| |||| || |||||| || || |||||||||||||||| ||||| ||||||| ||||| |||| |||||||| |||| |  |||    
T  38555272 ttttaatcttaaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaatttaaaccgtttgatcttttttatttaaa 38555173  T
Q  161 caagaaccgttggatcacagatgtctattgtatcgtacggtga 203  Q
      |||||| |||||| ||| ||||||||| |||| ||||||||    
T  38555172 ggagaaccattggattacacatgtctattttatcttacggtga 38555130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 3533594 - 3533519
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||| |||| | ||||||||||||| | |||| ||||||||||||| ||| ||||| |||||||||||||||||    
T  3533594 aaatgtctaaggtcgaccaacattataggcggtccaccatagaccttactaagttttttaattttaaccatttgat 3533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 4714139 - 4714230
Alignment:
Q  59 ttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaat-ttttaaattttaaccatttgatct 149  Q
    |||| |||||| |||||||| || | |||| |||| |||  ||||||| ||||||||| | |||||| ||||||||||||||||||||||||    
T  4714139 ttaagtttaacttcaaatgtctatggtggatcaaccttaagagtggtccaccatagacttcattaatattttaaattttaaccatttgatct 4714230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 2162727 - 2162825
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgatctattttt 155  Q
    ||||| |||||||  |||| | |||| | |||||||||| || |||||| ||||||||||||||||| ||||| |||||||||  |||||||| |||||    
T  2162727 gttaagtttaaccctaaatatgtaaggttgaccaacattttaggtggtccaccatagaccttattaattttttcaattttaacactttgatcttttttt 2162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 33231519 - 33231601
Alignment:
Q  69 cctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctat 151  Q
    |||||||||| || | ||||| ||| ||| |||||||| |||||| ||  ||||||||||| ||||| |||||||||||||||    
T  33231519 cctcaaatgtctatggtggacaaaccttagaagtggtccaccataaactctattaattttttaatttcaaccatttgatctat 33231601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 53401442 - 53401336
Alignment:
Q  99 aagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgcaaaca-agaaccgttggatcacagatgtctattgtatcgta 197  Q
    ||||||||||||||||||||  | ||||||| |||||||||  |||||||| ||||| |||| | | |||||||||||||   | |||||||||| | ||    
T  53401442 aagtggtctaccatagacctattaaattttttaattttaactgtttgatcttttttttcaaatagaaaaccgttggatcatgtaggtctattgtaacata 53401343  T
Q  198 cggtgaa 204  Q
    |||||||    
T  53401342 cggtgaa 53401336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 1794548 - 1794629
Alignment:
Q  75 atgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctattttt 155  Q
    ||||||| | ||||||||| |||  ||||||| ||||||||||||||| ||||||| ||||| |||| ||||||| ||||||    
T  1794548 atgtatatggtggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatcaattttt 1794629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 29663758 - 29663847
Alignment:
Q  59 ttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    ||||||||||| | |||||| |||| || |||||||||||| |||||| |||||| |||||| |||  |||| ||||||||||| |||||    
T  29663758 ttaattttaacattaaatgtctaaggtgaaccaacattataggtggtccaccataaaccttactaagatttttaattttaaccacttgat 29663847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 52633651 - 52633598
Alignment:
Q  101 gtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttt 154  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||||| ||||    
T  52633651 gtggtctaccatagaccttataaatttttttattttaacaatttgatctttttt 52633598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 36614185 - 36614249
Alignment:
Q  32 tccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacatt 96  Q
    ||||||| |||||||||||  ||| |||||||||||||  ||||||| |||||| ||||||||||    
T  36614185 tccgtcactcaaattggtcccgtttcgttaattttaactccaaatgtttaagatagaccaacatt 36614249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 306735 - 306780
Alignment:
Q  101 gtggtctaccatagaccttattaatttttaaattttaaccatttgat 147  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  306735 gtggtctatcatagaccttattaa-ttttaaattttaaccctttgat 306780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 17494247 - 17494329
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccattt 144  Q
    ||||||||| |||||| |||  || | |||| ||| |||| ||| ||||||||||||||||||||| | ||||||||||||||    
T  17494247 ttttaaccttaaatgtctaacgtgaaacaacgttaaaagtagtccaccatagaccttattaattttatgaattttaaccattt 17494329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 37884276 - 37884178
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||||| ||||| |||| | || ||||| ||||||  | ||| ||||||||||||||| ||||||  |||||||||| |||||||| |||||    
T  37884276 gttaagtttaaccccaaatatatatggtgaaccaatattatatatagtccaccatagaccttattaaattttccaattttaaccctttgatcttttttt 37884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 54485492 - 54485430
Alignment:
Q  181 atgtctattgtatcgtacggtgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
    ||||||||| |||| ||||||||  || ||||| ||||||| ||||| |||||||||||||||    
T  54485492 atgtctattctatcttacggtgagtcaacaacatctaattaatttcttctttcttcatcttct 54485430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 2311098 - 2311167
Alignment:
Q  85 tggaccaacattataagtggtctaccatagaccttattaat-ttttaaattttaaccatttgatctattt 153  Q
    ||||||||  ||| |||||||||| | |||||||||||||| || | ||||||||||||| |||||||||    
T  2311098 tggaccaatcttaaaagtggtctatcgtagaccttattaatattgttaattttaaccattcgatctattt 2311167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 11114976 - 11114915
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| || || |||||||||||||||| |||||||    
T  11114976 ttttaaccttaaatgtctaagctgaaccaactttgtaggtggtctaccatagactttattaa 11114915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 28657116 - 28657039
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattt 135  Q
    ||||| ||||||| ||||||| | || ||||||||| || || ||| || ||| |||||||||||||||||| |||||    
T  28657116 gttaactttaaccccaaatgtcttaggtggaccaaccttgtaggtgatccaccgtagaccttattaattttttaattt 28657039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 50547066 - 50547118
Alignment:
Q  99 aagtggtctaccatagaccttattaatttttaaattttaaccatttgatctat 151  Q
    |||||||| |||||| ||  ||||||||||| ||||| |||||||||||||||    
T  50547066 aagtggtccaccataaactctattaattttttaatttcaaccatttgatctat 50547118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 54484464 - 54484544
Alignment:
Q  163 agaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
    |||||| |||||  ||||| || |||| |||| |||||||| ||| ||||| ||||||| ||| | |||||||||||||||    
T  54484464 agaaccattggaatacagaggtttattctatcttacggtgagccaacaacatctaattaattttttctttcttcatcttct 54484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 136719 - 136814
Alignment:
Q  32 tccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt 127  Q
    ||||| ||||||||| ||||| |||||||||||||||| |||||||| |||| |||||| ||||  ||||||||||||||||||||||||||||||    
T  136719 tccgttagtcaaattagtcatattccgttaattttaacatcaaatgtctaaggtggaccgacatggtaagtggtctaccatagaccttattaattt 136814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 7312281 - 7312184
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||||| ||||||||| ||||||||||||||| || |||||  ||| |||| ||||||||||||| ||||| ||||||||||||| |||||    
T  7312281 gttaactttaaccccaaatgtattagatggaccaacattgtaggtggttcaccgtagatcttattaattttttaatttcaaccatttgatcttttttt 7312184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 30231576 - 30231665
Alignment:
Q  38 agtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt 127  Q
    ||||||||| ||| | |||||||||||||||| |||||||| |||| || ||||||||  ||||||||| |||||||||||| |||||||    
T  30231576 agtcaaattagtcctattccgttaattttaacatcaaatgtctaaggtgaaccaacatggtaagtggtccaccatagaccttgttaattt 30231665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 24757000 - 24757092
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatt-tttaaattttaaccatttgatct 149  Q
    ||||| ||||||| |||| |||| ||||||| ||||||| || |||||||||| ||||||||||||||| ||| ||||||||| |||||||||    
T  24757000 gttaactttaaccacaaaagtattagatggagcaacattgtaggtggtctaccttagaccttattaattcttttaattttaacaatttgatct 24757092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 153
Target Start/End: Original strand, 29380306 - 29380404
Alignment:
Q  56 ccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    |||||||||||||| ||||||||||| | |||| |||| ||| |||| ||| | | ||||||||||||||||| | ||||||||||||| |||||||||    
T  29380306 ccgttaattttaacttcaaatgtatatggtggatcaaccttaaaagtagtccatcgtagaccttattaattttgttaattttaaccattcgatctattt 29380404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 32505786 - 32505884
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa--tttttaaattttaaccatttgatctattttt 155  Q
    ||||| ||||||| ||||||| ||  |||||| |||||||  ||||||| |||||||||||||||||  ||||||| ||| |||| ||||||||||||||    
T  32505786 gttaagtttaaccccaaatgtctataatggac-aacattaagagtggtccaccatagaccttattaaattttttaagtttaaaccgtttgatctattttt 32505884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 23397355 - 23397257
Alignment:
Q  56 ccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||||| |||||| |||||||| || | ||||||||| ||| |||| ||| ||| || |||||||||||||| | ||||||||||||  |||||||||    
T  23397355 ccgttaaatttaacttcaaatgtctatggtggaccaaccttaaaagtagtccaccgtataccttattaattttgttaattttaaccatccgatctattt 23397257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 293636 - 293575
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| ||||| |||||| |||||||||||||||||    
T  293636 ttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 293575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 14328770 - 14328709
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| ||||| |||||| |||||||||||||||||    
T  14328770 ttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 14328709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 14421780 - 14421719
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| ||||| |||||| |||||||||||||||||    
T  14421780 ttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 14421719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 9927716 - 9927802
Alignment:
Q  55 tccgttaatttt-aacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatta-atttttaaattttaacc 140  Q
    |||||||||||| ||||| |||||| ||||||| |||||| || || ||||||||||| |||| |||||| |||||| ||||||||||    
T  9927716 tccgttaatttttaaccttaaatgtctaagatgaaccaactttgtaggtggtctacca-agactttattacattttttaattttaacc 9927802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 27082168 - 27082081
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt-ttaaattttaaccatttgatct 149  Q
    |||||||  |||||||||| | ||||||||||| |||  || || ||| |||||||||||||||| || ||||||| |||||||||||    
T  27082168 ttttaactccaaatgtatatggtggaccaacataatacatgatccaccgtagaccttattaatttatttaattttagccatttgatct 27082081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 232325 - 232405
Alignment:
Q  163 agaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaatta-ttttctcctttcttcatcttct 243  Q
    |||||| |||||| ||  ||||||||| |||| ||||||||| || ||||| ||||||| ||||||| ||||||||||||||    
T  232325 agaaccattggattacgcatgtctattttatcttacggtgaatcaacaacatctaattaattttctc-tttcttcatcttct 232405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 15728848 - 15728917
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt 127  Q
    ||||| ||||||||||||| | || | |||||||||||||||  | ||| |||||||||| |||||||||    
T  15728848 gttaagtttaacctcaaatatctatggtggaccaacattatagatagtccaccatagaccctattaattt 15728917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 18558656 - 18558716
Alignment:
Q  184 tctattgtatcgtacggtgaaccatcaacaactaattattttc-tcctttcttcatcttct 243  Q
    ||||||||| | ||||| | |||| ||| |||||||||||||| |||||||||||||||||    
T  18558656 tctattgtaacttacggcgtaccaacaaaaactaattattttcttcctttcttcatcttct 18558716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 22298724 - 22298816
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||||||| |||||| |||| ||||| ||| ||| | ||||||||||||| || |||||||  |||  | ||||||| |||||||| |||||    
T  22298724 ttttaaccttaaatgtctaaggtggacgaactttacaggtggtctaccataaactttattaaaatttttaatttaaccgtttgatcttttttt 22298816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 9662235 - 9662138
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||| |||||| |||||||| || | |||||||||||||||  | ||| |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  9662235 gttaaatttaacttcaaatgtctatggtggaccaacattatagatagtccaccatagaccttattaatttttcaattttaaccatttgatcttttttt 9662138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 26135733 - 26135828
Alignment:
Q  32 tccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt 127  Q
    ||||| ||||||||| ||| | ||  |||||||||||| |||||||| ||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  26135733 tccgttagtcaaattagtcctattatgttaattttaacatcaaatgtctaagatggaccgacatggtaagtggtccaccatagaccttattaattt 26135828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 243
Target Start/End: Original strand, 26406245 - 26406425
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt-ttaaattttaaccatttgatctatttttgcaaac 161  Q
    ||||||||| |||||| |||| || |||||| || || |||||| ||||||||  |||| ||||  || |||||||||| |||||| | |||||  |||     
T  26406245 ttttaaccttaaatgtctaaggtgaaccaactttgtaggtggtccaccatagatattataaattcatttaattttaaccctttgatat-tttttaaaaaa 26406343  T
Q  162 aagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcc-tttcttcatcttct 243  Q
     ||||||||||||||| | |||||| ||||||| ||| |||||| ||||||| |||||| |||||||| ||||||||||||||    
T  26406344 gagaaccgttggatcatatatgtctgttgtatcatacagtgaacaatcaacacctaatt-ttttctccatttcttcatcttct 26406425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 35484306 - 35484126
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatt-tttgcaaac 161  Q
    ||||||||  |||||| |||| || |||||||||||| |||||| |||||||| |||| ||  |||| |||||||||| |||||||| || |||  |||     
T  35484306 ttttaaccctaaatgtctaaggtgaaccaacattataggtggtccaccatagatcttaatagatttttaattttaaccctttgatcttttgtttataaat 35484207  T
Q  162 aagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
     ||||| ||| ||||| | |||||||||||||||||  |||||||  ||||||| |||| |||||   ||||||||||||||    
T  35484206 gagaacagttagatcatacatgtctattgtatcgtatagtgaaccgccaacaaccaatt-ttttccaatttcttcatcttct 35484126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 7354623 - 7354688
Alignment:
Q  59 ttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  7354623 ttaactttaaccacaaatgtctaagatggaccaacattataagtggtccatcgtagaccttattaa 7354688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 28325192 - 28325284
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctatttt 154  Q
    |||||| || |||||| |||| ||||||||| || || |||||||||||||||| ||||| || |||||||||| |||| |||||||| ||||    
T  28325192 ttttaatcttaaatgtctaaggtggaccaactttgtaggtggtctaccatagactttattaaaattttaaatttaaaccgtttgatctttttt 28325284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 147
Target Start/End: Original strand, 16755989 - 16756079
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatt-tttaaattttaaccatttgat 147  Q
    ||||| ||||||||||||||| || | || | |||| ||| |||| |||||||||||| | |||||||| ||| |||||||||||||||||    
T  16755989 gttaactttaacctcaaatgtctatggtgaaacaaccttaaaagttgtctaccatagatcctattaattattttaattttaaccatttgat 16756079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 11501297 - 11501393
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||| |||||| |||||||| || | ||||||||| ||| |||||||  |   ||||||||||||||||| | ||||||||||||| |||||||||    
T  11501297 gttaactttaacttcaaatgtctatggtggaccaaccttaaaagtggttcattgtagaccttattaattttgttaattttaaccattcgatctattt 11501393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 45719745 - 45719820
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||| |||| ||||||||||||||| ||| || |||||| |||||| ||| ||||| ||||||||||| |||||    
T  45719745 aaatgtctaaggtggaccaacattataggtgctccaccataaaccttactaagttttttaattttaaccaattgat 45719820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 25154932 - 25154846
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatc 148  Q
    ||||||||| |||||| |||| || |||||| |||||||||||| |||||| | |||||| ||| ||| | |||||||| |||||||    
T  25154932 ttttaaccttaaatgtctaaggtgaaccaactttataagtggtccaccataaaacttattaaatcttttatttttaaccgtttgatc 25154846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 3332181 - 3332064
Alignment:
Q  32 tccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt-tta 130  Q
    ||||| ||||| ||| ||| | |||||||||||||||| | |||||| |||| || ||||| ||  |||||| |  |||||| ||||||||||||| ||     
T  3332181 tccgttagtcatattagtcctcttccgttaattttaacattaaatgtttaaggtgcaccaatatggtaagtgatacaccatataccttattaatttattt 3332082  T
Q  131 aattttaaccatttgatc 148  Q
    ||||||| || |||||||    
T  3332081 aattttagccctttgatc 3332064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 46458709 - 46458648
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| ||||| || ||| |||||||||||||||||    
T  46458709 ttttaaccttaaatgtctaaggtgaaccaactttataggtagtccaccatagaccttattaa 46458648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 32693947 - 32694043
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||| |||||| | ||||||||| ||||||||||| ||| |||||| ||| ||||||||||||||||||| | |||||||||| ||||||||||||    
T  32693947 gttaactttaactttaaatgtatatgatggaccaaccttaaaagtggcctatcatagaccttattaattttattaattttaaccgtttgatctattt 32694043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 24069432 - 24069357
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||| |||| ||||||||||||||| |||||| ||||||||||||| ||| ||||| |||||||||||||||||    
T  24069432 aaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaaccatttgat 24069357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 13513540 - 13513625
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    ||||||| |||||||||||||||| ||||   ||| |||||||| |||||| |||||||||| ||||| |||||||||||||||||    
T  13513540 ttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaaccatttgat 13513625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 13603073 - 13603158
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    ||||||| |||||||||||||||| ||||   ||| |||||||| |||||| |||||||||| ||||| |||||||||||||||||    
T  13603073 ttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatataccttattaatttttttaattttaaccatttgat 13603158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 34617191 - 34617106
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagacctta-ttaatttttaaattttaaccatttgat 147  Q
    ||||||||  ||||||||||| ||||||||||||| | |||||| ||| ||||||||| | ||||||| |||||||||||||||||    
T  34617191 ttttaaccctaaatgtataaggtggaccaacattacaggtggtccaccgtagaccttactaaattttttaattttaaccatttgat 34617106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 7770884 - 7770809
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||| |||| ||||||||||||||| ||||||  |||||||||||| ||| ||||| |||||||||||||||||    
T  7770884 aaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaaccatttgat 7770809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 7796794 - 7796719
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||| |||| ||||||||||||||| ||||||  |||||||||||| ||| ||||| |||||||||||||||||    
T  7796794 aaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaaccatttgat 7796719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 7816075 - 7816000
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaa-tttttaaattttaaccatttgat 147  Q
    |||||| |||| ||||||||||||||| ||||||  |||||||||||| ||| ||||| |||||||||||||||||    
T  7816075 aaatgtctaaggtggaccaacattataggtggtcctccatagaccttactaagttttttaattttaaccatttgat 7816000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 39515329 - 39515404
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaattttta-aattttaaccatttgat 147  Q
    |||||| |||| ||||||||||||||| |||||| | ||||||||||| ||| ||||| |||||||||||||||||    
T  39515329 aaatgtctaaggtggaccaacattataggtggtccatcatagaccttactaagttttataattttaaccatttgat 39515404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 44076332 - 44076200
Alignment:
Q  85 tggaccaacattataagtggtctaccatagaccttattaattttta-aattttaaccatttgatctatttttgcaaacaagaaccgttggatcacagatg 183  Q
    |||| |||||||| || || || |||||| | |||||||||||||  ||||| ||||||||||||||||| |  ||||| |||||||| |||||| || |    
T  44076332 tggaacaacattaaaaatgatccaccataaatcttattaatttttttaatttaaaccatttgatctatttattaaaacacgaaccgtttgatcac-gagg 44076234  T
Q  184 tctattgtatcgtacggtgaaccatcaacaacta 217  Q
    | ||||||||| ||  ||||| ||||||||||||    
T  44076233 tttattgtatcatatagtgaatcatcaacaacta 44076200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 42100105 - 42100009
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||| |||||| |||||||| |  | ||||||||| ||| |||||||| | | ||||||||||||||||| | ||||||||||||| |||||||||    
T  42100105 gttaactttaacttcaaatgtctttggtggaccaaccttaaaagtggtccatcgtagaccttattaattttgttaattttaaccattcgatctattt 42100009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 38696999 - 38696908
Alignment:
Q  64 tttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||||||||||| | ||   |||||||||||||||  | ||| ||||||||||| |||||||||| |||||||| | |||||||| |||||    
T  38696999 tttaacctcaaatttctattgtggaccaacattatagatagtccaccatagacctaattaatttttcaattttaatcctttgatcttttttt 38696908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 42877736 - 42877838
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgc 157  Q
    ||||| ||||||| ||||||| || | ||||||||| |||  | ||||| |||||||| | |||||||| || ||||| |||| |||||||||||||| |    
T  42877736 gttaactttaaccccaaatgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaattatttaatttcaaccctttgatctatttttcc 42877835  T
Q  158 aaa 160  Q
    |||    
T  42877836 aaa 42877838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 13367046 - 13366985
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| ||||| |||||| |||||||||||||||||    
T  13367046 ttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 13366985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 39220799 - 39220864
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt 128  Q
    ||||||||| |||||| |||| || | ||| |||| |||| |||||||||||||||||||||||||    
T  39220799 ttttaaccttaaatgtctaaggtgaaacaatattaaaagtagtctaccatagaccttattaatttt 39220864  T

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Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 44606259 - 44606352
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctattttt 155  Q
    ||||||||| |||||| |||| || |||||| ||||| |||||| |||||||||||| || ||| ||| | |||||||| |||||||| |||||    
T  44606259 ttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttgttaaatcttttatttttaaccgtttgatcttttttt 44606352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 6397942 - 6397998
Alignment:
Q  100 agtggtctaccatagaccttattaa-tttttaaattttaaccatttgatctattttt 155  Q
    ||||||| ||||||||||||||||| ||||| ||||| ||||||||||||| |||||    
T  6397942 agtggtccaccatagaccttattaatttttttaatttaaaccatttgatctgttttt 6397998  T

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Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 42872188 - 42872117
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattttt 129  Q
    ||||| ||||||||||||||| || | | ||||||| |||  |||||||||||||||| | |||||||||||    
T  42872188 gttaactttaacctcaaatgtctatggtagaccaaccttaagagtggtctaccatagatcctattaattttt 42872117  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 45395112 - 45395171
Alignment:
Q  85 tggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccattt 144  Q
    |||||||| ||| || |||||| | |||||||| ||||||||||||||||| ||||||||    
T  45395112 tggaccaatattgtaggtggtccatcatagaccgtattaatttttaaatttaaaccattt 45395171  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 153
Target Start/End: Original strand, 32797256 - 32797354
Alignment:
Q  56 ccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||||| ||||||  ||||||| || |||||| |||| ||| || ||||  | | ||||||||||||||||| | ||||||||||||| |||||||||    
T  32797256 ccgttaagtttaactccaaatgtctatgatggatcaaccttaaaaatggttcatcgtagaccttattaattttgttaattttaaccattcgatctattt 32797354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 36938869 - 36938963
Alignment:
Q  131 aattttaaccatttgatctatttttgcaaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattatttt 225  Q
    |||||||||| |||||| | |||||  |||  ||||||||||||||| | | |||| ||||||| || |||||| |||||||| |||||| ||||    
T  36938869 aattttaaccctttgatatttttttaaaaaggagaaccgttggatcatataggtctgttgtatcttaaggtgaatcatcaacacctaattttttt 36938963  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 14840896 - 14840807
Alignment:
Q  59 ttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgat 147  Q
    |||| ||||||| ||||||| || | ||||||||||||| ||||| || |||||||  |||||| ||||||| ||||| |||| ||||||    
T  14840896 ttaagtttaaccacaaatgtctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaatttaaaccgtttgat 14840807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 38696455 - 38696516
Alignment:
Q  87 gaccaacattataagtggtctaccatagaccttattaattttta-aattttaaccatttgat 147  Q
    ||||||| ||| |||||||| |||||||| || ||||||||||| |||||||||| ||||||    
T  38696455 gaccaaccttaaaagtggtccaccatagatctaattaatttttataattttaaccctttgat 38696516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 45279812 - 45279893
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||||||| | |||||||   ||| |||||||||| | ||||||||| ||||||| | ||||||||||||| |||||||||    
T  45279812 aaatgtatatggtggaccagtcttaaaagtggtctatcgtagaccttaataattttgttaattttaaccattcgatctattt 45279893  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 28403543 - 28403603
Alignment:
Q  32 tccgtcagtcaaattggtcatgttccgttaattttaacctcaaatgtataagatggaccaa 92  Q
    |||||||||||| ||||||||  ||  ||||||||||| |||||||| |||| ||||||||    
T  28403543 tccgtcagtcaatttggtcatactctcttaattttaacttcaaatgtttaaggtggaccaa 28403603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 36070303 - 36070359
Alignment:
Q  68 acctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||| |||||| |||| || |||||| ||||| |||||| |||||||||||||||||    
T  36070303 accttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 36070359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 19466201 - 19466109
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    |||||||||||||||| || | ||||| |||||||||  | ||| |||||||||||||||||||||| ||||| | |||||||||||||||||    
T  19466201 ttttaacctcaaatgtctatggtggactaacattatagatagtccaccatagaccttattaattttttaatttcagccatttgatctattttt 19466109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 51300252 - 51300160
Alignment:
Q  64 tttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattttt 155  Q
    |||||||| || |||  ||| ||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||    
T  51300252 tttaaccttaagtgtcaaaggtggaccaacattaaaagtggtccaccatagaccttattaattttatgaattttaaccatttgatatattttt 51300160  T

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Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 36509931 - 36510022
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttt 154  Q
    |||||||||||||||| || | ||||| |||||||||  |  || |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  36509931 ttttaacctcaaatgtctatggtggactaacattatagatattccaccatagaccttattaattttttaattttagccatttgatctatttt 36510022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 16757522 - 16757456
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  16757522 gttaactttaaccacaaatgtctaagatggaccaacattataagtggtccatcatagaccttattaa 16757456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 48097030 - 48096932
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatt-tttaaattttaaccatttgatctattttt 155  Q
    ||||| |||||||||||||||||| | ||||||||| |||  |||||||||||||||| | |||||||| ||||||| |||| | |||||||| |||||    
T  48097030 gttaagtttaacctcaaatgtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatattaatcgtttgatcttttttt 48096932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 15746764 - 15746662
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgc 157  Q
    ||||| |||||| |||||||| || | ||||||||  |||  ||||||| |||||||| | ||||||| ||| |||||||||| |||||||||||||| |    
T  15746764 gttaagtttaacttcaaatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaatcttttaattttaaccctttgatctatttttac 15746665  T
Q  158 aaa 160  Q
    |||    
T  15746664 aaa 15746662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 16963966 - 16964047
Alignment:
Q  73 aaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    |||||| || ||||||||||| ||| |||||||| | ||||||||||||||||||| | |||||||||| || |||||||||    
T  16963966 aaatgtttatgatggaccaaccttaaaagtggtccatcatagaccttattaattttgttaattttaacccttcgatctattt 16964047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 30535654 - 30535570
Alignment:
Q  71 tcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    |||||||| || | |||||||||||||||  | ||| ||||||||||||||| |||||| |||||||||| | |||||| |||||    
T  30535654 tcaaatgtctatggtggaccaacattatagatagtccaccatagaccttatttattttttaattttaaccctctgatcttttttt 30535570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 38965259 - 38965195
Alignment:
Q  64 tttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt 128  Q
    ||||| || ||||||||||| | |||||| |||| ||||||||||||||| ||||||||||||||    
T  38965259 tttaatcttaaatgtataaggtagaccaatattaaaagtggtctaccataaaccttattaatttt 38965195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 41873969 - 41873877
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattttt-aaattttaaccatttgatct 149  Q
    ||||| ||||||| ||||||| || | ||||||||| |||  ||||||| ||||||||| | |||||||||| ||||||||||| ||||||||    
T  41873969 gttaagtttaaccacaaatgtctatggtggaccaaccttaagagtggtccaccatagacttcattaattttttaaattttaaccgtttgatct 41873877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 34258709 - 34258627
Alignment:
Q  59 ttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaattt-ttaaattttaacc 140  Q
    ||||||||||||| |||| | |||| |||||||||||| || | |||| |||||| ||||||||||||| || ||||||||||    
T  34258709 ttaattttaacctaaaatatctaaggtggaccaacattgtatgcggtccaccataaaccttattaatttatttaattttaacc 34258627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 7161294 - 7161229
Alignment:
Q  85 tggaccaacattataagtggtctaccatagaccttattaattttt-aaattttaaccatttgatct 149  Q
    |||||||||||||||  | ||| ||||||||||||| |||||||| |||||||||||||| |||||    
T  7161294 tggaccaacattatagatagtccaccatagaccttaataatttttaaaattttaaccattagatct 7161229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 15743416 - 15743540
Alignment:
Q  119 tattaatttttaaattttaaccatttgatctatttttgcaaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaa 218  Q
    ||||||||||||| |||||||| |||||||||||||| ||||  ||||| ||||||| ||     | |||| |||| || |||||  || ||||||||||    
T  15743416 tattaatttttaa-ttttaaccctttgatctattttttcaaaagagaacggttggattacgcggatgtattttatcttatggtgagtcaacaacaactaa 15743514  T
Q  219 ttattttctcctttcttcatcttctc 244  Q
    ||| ||| | ||||||||||||||||    
T  15743515 ttaattttttctttcttcatcttctc 15743540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 46467264 - 46467449
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttttgc 157  Q
    ||||| |||||||  |||||| || | ||||||||||||| ||||| || ||| ||||  ||||||| |||| ||||| |||| |||||| ||||||       
T  46467264 gttaagtttaaccataaatgtctatggtggaccaacattaaaagtgatccaccgtagatgttattaaatttttaatttaaaccgtttgatatattttcta 46467363  T
Q  158 aaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaattattttctcctttcttcatcttct 243  Q
    |||  |  ||| ||| || | |  ||||||||||| | ||||||| |||| |||||||||||| |||  | |||||||||||||||    
T  46467364 aaaagatgaccattgaattatacgtgtctattgtaacttacggtgcaccaacaacaactaattctttctttctttcttcatcttct 46467449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 47762015 - 47762076
Alignment:
Q  62 attttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatta 123  Q
    |||||||||| |||||||||||||||||||||||  || ||||||||||   ||||||||||    
T  47762015 attttaacctaaaatgtataagatggaccaacatcgtaggtggtctacccgtgaccttatta 47762076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 51042343 - 51042240
Alignment:
Q  56 ccgttaattttaacctcaaatgtataagatggacca---acattataagtggtctaccatagaccttattaattt-ttaaattttaaccatttgatctat 151  Q
    ||||||| | ||||||||||||| || ||||||| |   ||||| || |||||||||||||||||| |||||||| || ||||| |||| |||||||| |    
T  51042343 ccgttaagtataacctcaaatgtctatgatggactacaaacattgtaggtggtctaccatagacctcattaatttgtttaatttaaaccgtttgatcttt 51042244  T
Q  152 tttt 155  Q
    ||||    
T  51042243 tttt 51042240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 51726840 - 51726779
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| |||| || |||||| ||||| |||||| |||||||||||||||||    
T  51726840 ttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 51726779  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 835390 - 835489
Alignment:
Q  55 tccgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctatttt 154  Q
    |||||||| |||||| |||||| | || |||| ||||||||||||  | ||| | |||||||| ||| ||||||| |||||||||| |||||||| ||||    
T  835390 tccgttaactttaacttcaaatatttatgatgaaccaacattatagattgtccatcatagacc-tataaatttttcaattttaaccctttgatctttttt 835488  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 243
Target Start/End: Complemental strand, 9226214 - 9226027
Alignment:
Q  57 cgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatt-tttaaattttaaccatttgatctattttt 155  Q
    |||||| ||||||||||||||| || | |||| |||| ||| |||||||| |||||||| | |||||||| ||| ||||| ||   |||||||| ||||     
T  9226214 cgttaaatttaacctcaaatgtctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttaaattgtttgatctttttta 9226115  T
Q  156 gcaaacaagaaccgttggatcacagatgtctattgtatcgtacggtgaaccatcaacaactaatt-attttctcctttcttcatcttct 243  Q
      |||  |||||| ||  |||||  ||||||||| |||| ||||||||  ||| |||| |||||| ||||||| |||||||||| ||||    
T  9226114 ttaaaagagaaccattaaatcacgcatgtctattttatcttacggtgagtcattaacatctaattaattttct-ctttcttcattttct 9226027  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 21507197 - 21507280
Alignment:
Q  72 caaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||||||| || |||||||||| | || |||||| | | |||||||||||||||||| ||||| | || |||||||| |||||    
T  21507197 caaatgtattaggtggaccaacaatgtaggtggtccatcgtagaccttattaattttttaatttcagccgtttgatcttttttt 21507280  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 9633895 - 9633980
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgat 147  Q
    ||||||| |||||||| |||| || ||||   ||| | |||||| ||||||||||||||| |||||||||||||| ||| ||||||    
T  9633895 ttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatagaccttattaaatttttaaattttgaccctttgat 9633980  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 21277114 - 21277175
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||| |||| |||||| |||| || |||||| ||||| |||||| |||||||||||||||||    
T  21277114 ttttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccatagaccttattaa 21277175  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 8092719 - 8092779
Alignment:
Q  64 tttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    |||||||| |||| | |||| || |||||| ||||| |||||| |||||||||||||||||    
T  8092719 tttaaccttaaatatctaaggtgaaccaactttataggtggtccaccatagaccttattaa 8092779  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 13642553 - 13642461
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||||||| |||||| |||| ||||| ||| ||| | ||||||||||||| || |||||||  |||  | ||||||| |||||||| |||||    
T  13642553 ttttaaccttaaatgtctaaggtggacgaactttacaggtggtctaccataaactttattaaaatttttaatttaaccgtttgatcttttttt 13642461  T

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Target: scaffold2071 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 673 - 581
Alignment:
Q  64 tttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctattttt 155  Q
    ||||||||||||||||||  |||||||||| |||  ||||||| ||||||||||||||| ||||||| ||||| |||| |||||||| |||||    
T  673 tttaacctcaaatgtatataatggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatctgttttt 581  T

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Target: scaffold0178 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 1331 - 1422
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    ||||||||| |||||| |||| || |||||| ||||||| | |||||||||||| |||||||||||| |||||||||| |||||||| |||||    
T  1331 ttttaaccttaaatgtttaaggtgaaccaactttataag-gatctaccatagactttattaattttttaattttaaccgtttgatcttttttt 1422  T

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Target: scaffold0148 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 14820 - 14916
Alignment:
Q  59 ttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttttaaattttaaccatttgatctattttt 155  Q
    |||| ||||||||| ||||| || |||||||||| ||||||  || || ||||||||| |||||||||||| ||||| | |||||||||||||||||    
T  14820 ttaactttaacctctaatgtctatgatggaccaatattatagatgatccaccatagacattattaattttttaatttaagccatttgatctattttt 14916  T

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Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 109743 - 109648
Alignment:
Q  59 ttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    |||| |||||| ||||||||||| | ||||||||| ||| || | ||| | | ||||||||||||||||| | |||||||||||||||||||||||    
T  109743 ttaactttaacttcaaatgtatatggtggaccaaccttaaaaatagtccatcgtagaccttattaattttgttaattttaaccatttgatctattt 109648  T

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Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 125212 - 125137
Alignment:
Q  75 atgtataagatggaccaacattataagtggtctaccatagaccttattaa--tttttaaattttaaccatttgatc 148  Q
    ||||||| ||||||||||| ||| |||||||| |||||||||||||||||  ||||| ||||| |||| |||||||    
T  125212 atgtatatgatggaccaaccttaaaagtggtccaccatagaccttattaaatttttttaatttaaaccctttgatc 125137  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 152058 - 151966
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatta-atttttaaattttaaccatttgatct 149  Q
    |||||||||||||  |||| | |||||| ||||||||||||| |||||| |||| |||||| || | |||||||| |||||||| ||||||||    
T  152058 gttaattttaacccaaaatatttaagatagaccaacattataggtggtccaccaaagacctcatcagatttttaatttttaaccgtttgatct 151966  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 151452 - 151549
Alignment:
Q  57 cgttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttatt-aatttttaaattttaaccatttgatctattt 153  Q
    ||||||||||||| | ||||||  |||||||||||||||| || || ||| |||| ||| ||  || ||||||||| | ||||||| |||||||||||    
T  151452 cgttaattttaacttaaaatgttcaagatggaccaacattgtaggtagtcaaccaaagatctggttcaatttttaattcttaaccaattgatctattt 151549  T

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Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 22125 - 22196
Alignment:
Q  85 tggaccaacattataagtggtctaccatagaccttattaattt-ttaaattttaaccatttgatctattttt 155  Q
    |||||||||||| || |||||| |||||||||| ||||||||| || ||||| ||||||||||| |||||||    
T  22125 tggaccaacattgtaggtggtccaccatagaccctattaatttctttaatttaaaccatttgatttattttt 22196  T

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Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 16065 - 16126
Alignment:
Q  63 ttttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaa 124  Q
    ||||||||| |||||| ||||||| |||||| |||||  ||||| |||||||||||||||||    
T  16065 ttttaaccttaaatgtctaagatgaaccaactttatagatggtccaccatagaccttattaa 16126  T

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Target: scaffold0201 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 21245 - 21337
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatct 149  Q
    ||||| ||||||| ||||||| || | ||||||||| ||   ||||||| ||||||||| | ||||||||| |||||||||||| ||||||||    
T  21245 gttaagtttaaccacaaatgtctatggtggaccaaccttcagagtggtccaccatagacttcattaattttttaaattttaaccgtttgatct 21337  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 52709 - 52805
Alignment:
Q  58 gttaattttaacctcaaatgtataagatggaccaacattataagtggtctaccatagaccttattaatttt-taaattttaaccatttgatctattt 153  Q
    ||||| |||||| | ||||||||| | ||||||||| ||| || |||||||   ||||||||||||||||| | ||||||| || || |||||||||    
T  52709 gttaactttaactttaaatgtatatggtggaccaaccttaaaaatggtctatggtagaccttattaattttcttaattttatccgttcgatctattt 52805  T

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