View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11112_low_6 (Length: 253)
Name: NF11112_low_6
Description: NF11112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11112_low_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 93 - 253
Target Start/End: Complemental strand, 28804332 - 28804172
Alignment:
| Q |
93 |
tcattaagaagaaagattcacattctcttaagttactcataagtcagaagttaaacatgcattaccaacttaactagtccaacacaatatttacaagatt |
192 |
Q |
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| T |
28804332 |
tcattaagaagaaagattcacattctcttaagttactcataagtcataagttaaacatgcattaccaacttaactagtcctacacaatatttacaagatt |
28804233 |
T |
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| Q |
193 |
acaacatgttgaatctactcctaaaatctccaacacaagcaaagcatagcatcttttcata |
253 |
Q |
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| T |
28804232 |
acaacatgttgaatctactcctaaaatctccaacacaagcaaagcatagcatcttttcata |
28804172 |
T |
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